Dimorphically expressed genes in the female versus male comparison at E13.5 Gene Symbol Gene Title Probe Set ID Entrez Gene Gender Enriched Cluster Number* Cluster Order* Tmem109 transmembrane protein 109 1416032_at 68539 M 1 1 Rhbdl2 rhomboid, veinlet-like 2 (Drosophila) 1442819_at 230726 M 1 2 Fam3c family with sequence similarity 3, member C 1448904_at 27999 M 1 3 Stk17b serine/threonine kinase 17b (apoptosis-inducing) 1423452_at 98267 M 1 4 Slc39a8 solute carrier family 39 (metal ion transporter), member 8 1416832_at 67547 M 1 5 Mapre1 microtubule-associated protein, RP/EB family, member 1 1428819_at 13589 M 1 6 Myh9 myosin, heavy polypeptide 9, non-muscle 1420171_s_at 17886 M 1 7 Sash1 SAM and SH3 domain containing 1 1448005_at 70097 M 1 8 Col17a1 collagen, type XVII, alpha 1 1418799_a_at 12821 M 1 9 Reep3 receptor accessory protein 3 1424781_at 28193 M 1 10 Nipbl Nipped-B homolog (Drosophila) 1453576_at 71175 M 1 11 Dym dymeclin 1437141_x_at 69190 M 1 12 Arf3 ADP-ribosylation factor 3 1437331_a_at 11842 M 1 13 Ep400 E1A binding protein p400 1447349_s_at 75560 M 1 14 Cxxc5 CXXC finger 5 1448960_at 67393 M 1 15 Ptpn12 protein tyrosine phosphatase, non-receptor type 12 1450478_a_at 19248 M 1 16 Lgi2 leucine-rich repeat LGI family, member 2 1457040_at 246316 M 1 17 Pan3 PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae) 1428768_at 72587 M 1 18 Ypel5 yippee-like 5 (Drosophila) 1433593_at 383295 M 1 19 Wbscr27 Williams Beuren syndrome chromosome region 27 (human) 1418359_at 79565 M 1 20 Rgs3 regulator of G-protein signaling 3 1425296_a_at 50780 M 1 21 Rtkn rhotekin 1425601_a_at 20166 M 1 22 Chd1 chromodomain helicase DNA binding protein 1 1457473_at 12648 M 1 23 Swap70 SWA-70 protein 1434225_at 20947 M 1 24 AU040320 expressed sequence AU040320 1452150_at 100317 M 1 25 Iqsec1 IQ motif and Sec7 domain 1 1427145_at 232227 M 1 26 Tyrobp TYRO protein tyrosine kinase binding protein 1450792_at 22177 M 1 27 Vps11 vacuolar protein sorting 11 (yeast) 1428110_x_at 71732 M 1 28 Kctd14 potassium channel tetramerisation domain containing 14 1455452_x_at 233529 M 1 29 Tnfaip1 tumor necrosis factor, alpha-induced protein 1 (endothelial) 1417866_at 21927 M 1 30 Nudt18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 1435902_at 213484 M 1 31 Znf512b zinc finger protein 512B 1436184_at 269401 M 1 32 Btd biotinidase 1417987_at 26363 M 1 33 Fam82a2 family with sequence similarity 82, member A2 1428196_a_at 67809 M 1 34 Pygb brain glycogen phosphorylase 1433504_at 110078 M 1 35 Slc44a2 solute carrier family 44, member 2 1438559_x_at 68682 M 1 36 Cyb5r3 cytochrome b5 reductase 3 1422186_s_at 109754 M 1 37 Mib2 mindbomb homolog 2 (Drosophila) 1424862_s_at 76580 M 1 38 2310044G17Rik RIKEN cDNA 2310044G17 gene 1424915_s_at 217732 M 1 39 Ranbp2 RAN binding protein 2 1422621_at 19386 M 1 40 Pigh phosphatidylinositol glycan anchor biosynthesis, class H 1455860_at 110417 M 1 41 Stradb STE20-related kinase adaptor beta 1433544_at 227154 M 1 42 Gnb2 guanine nucleotide binding protein (G protein), beta 2 1450623_at 14693 M 1 43 Dnajc5 DnaJ (Hsp40) homolog, subfamily C, member 5 1436179_a_at 13002 M 1 44 Amotl1 angiomotin-like 1 1428785_at 75723 M 1 45 Naf1 nuclear assembly factor 1 homolog (S. cerevisiae) 1452192_at 234344 M 1 46 4933403F05Rik RIKEN cDNA 4933403F05 gene 1434979_at 108654 M 1 47 Plscr3 phospholipid scramblase 3 1449020_at 70310 M 1 48 Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 1449731_s_at 18035 M 1 49 Eif3a eukaryotic translation initiation factor 3, subunit A 1416660_at 13669 M 2 50 Gmeb1 glucocorticoid modulatory element binding protein 1 1456232_at 56809 M 2 51 Mfsd9 major facilitator superfamily domain containing 9 1460619_at 211798 M 2 52 Ctnnd1 catenin (cadherin associated protein), delta 1 1422450_at 12388 M 2 53 Fap fibroblast activation protein 1417552_at 14089 M 2 54 Cpeb2 cytoplasmic polyadenylation element binding protein 2 1434272_at 231207 M 2 55 Dmxl2 Dmx-like 2 1428749_at 235380 M 2 56 Pak3 p21 protein (Cdc42/Rac)-activated kinase 3 1435486_at 18481 M 2 57 Flt1 FMS-like tyrosine kinase 1 1451756_at 14254 M 2 58 Slco5a1 solute carrier organic anion transporter family, member 5A1 1440874_at 240726 M 2 59 Acvr1 activin A receptor, type 1 1416786_at 11477 M 2 60 Map3k7ip3 mitogen-activated protein kinase kinase kinase 7 interacting protein 3 1428762_at 66724 M 2 61 Ubr3 ubiquitin protein ligase E3 component n-recognin 3 1429107_at 68795 M 2 62 Kif13a kinesin family member 13A 1451890_at 16553 M 2 63 Gria3 glutamate receptor, ionotropic, AMPA3 (alpha 3) 1420563_at 53623 M 2 64 Baiap2l1 BAI1-associated protein 2-like 1 1424951_at 66898 M 2 65 BC059842 cDNA sequence BC059842 1440819_s_at 230676 M 2 66 Gm129 predicted gene 129 1435188_at 229599 M 2 67 Fbxo6 F-box protein 6 1417501_at 50762 M 2 68 Msi2 Musashi homolog 2 (Drosophila) 1435521_at 76626 M 2 69 Bche butyrylcholinesterase 1436098_at 12038 M 2 70 --- --- 1430245_at --- M 2 71 Ltbp4 latent transforming growth factor beta binding protein 4 1436665_a_at 108075 M 2 72 Egr2 early growth response 2 1427683_at 13654 M 2 73 Nipal1 NIPA-like domain containing 1 1456321_at 70701 M 2 74 Magi3 membrane associated guanylate kinase, WW and PDZ domain containing 3 1435461_at 99470 M 2 75 Egfr epidermal growth factor receptor 1435888_at 13649 M 2 76 Inadl InaD-like (Drosophila) 1418983_at 12695 M 2 77 Foxc1 forkhead box C1 1419486_at 17300 M 2 78 Enpp5 ectonucleotide pyrophosphatase/phosphodiesterase 5 1425702_a_at 83965 M 2 79 Cds1 CDP-diacylglycerol synthase 1 1456114_at 74596 M 2 80 Serinc5 serine incorporator 5 1433571_at 218442 M 2 81 --- --- 1445758_at --- M 2 82 Vps37a vacuolar protein sorting 37A (yeast) 1419177_at 52348 M 2 83 N4bp1 NEDD4 binding protein 1 1455606_at 80750 M 2 84 Samd8 sterile alpha motif domain containing 8 1434402_at 67630 M 2 85 Eif2c1 eukaryotic translation initiation factor 2C, 1 1434331_at 236511 M 2 86 Slc6a6 solute carrier family 6 (neurotransmitter transporter, taurine), member 6 1437149_at 21366 M 2 87 Myo1c myosin IC 1419648_at 17913 M 2 88 Slit3 Slit homolog 3 (Drosophila) 1427086_at 20564 M 2 89 BC023744 cDNA sequence BC023744 1436591_at 231668 M 2 90 Coro1a coronin, actin binding protein 1A 1416246_a_at 12721 F 3 91 Ddx28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 1428702_at 71986 F 3 92 Pla2g12a phospholipase A2, group XIIA 1452026_a_at 66350 F 3 93 Ttc26 tetratricopeptide repeat domain 26 1435401_at 264134 F 3 94 Mrps25 mitochondrial ribosomal protein S25 1418716_at 64658 F 3 95 Ncbp2 nuclear cap binding protein subunit 2 1423045_at 68092 F 3 96 Prpf3 PRP3 pre-mRNA processing factor 3 homolog (yeast) 1424314_at 70767 F 3 97 Tusc4 tumor suppressor candidate 4 1417046_at 56032 F 3 98 Eif1b eukaryotic translation initiation factor 1B 1428272_at 68969 F 3 99 Gm13880 /// Trappc6bpredicted gene 13880 /// trafficking protein particle complex 6B 1428177_at 433458 /// 78232 F 3 100 Bag2 BCL2-associated athanogene 2 1423948_at 213539 F 3 101 Orc2l origin recognition complex, subunit 2-like (S. cerevisiae) 1418226_at 18393 F 3 102 Taf9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor 1422778_at 108143 F 3 103 Msra methionine sulfoxide reductase A 1448856_a_at 110265 F 3 104 Hmbs hydroxymethylbilane synthase 1426475_at 15288 F 3 105 Dnajc4 DnaJ (Hsp40) homolog, subfamily C, member 4 1417934_at 57431 F 3 106 Arpc4 actin related protein 2/3 complex, subunit 4 1423588_at 68089 F 3 107 Arf1 ADP-ribosylation factor 1 1426390_a_at 11840 F 3 108 Arglu1 arginine and glutamate rich 1 1433597_at 234023 F 3 109 Racgap1 Rac GTPase-activating protein 1 1451358_a_at 26934 F 3 110 Spg21 spastic paraplegia 21 homolog (human) 1451036_at 27965 F 3 111 Ppp1cc protein phosphatase 1, catalytic subunit, gamma isoform 1452046_a_at 19047 F 3 112 Coil coilin 1416692_at 12812 F 3 113 Trim37 tripartite motif-containing 37 1436394_at 68729 F 3 114 Noc4l nucleolar complex associated 4 homolog (S. cerevisiae) 1423826_at 100608 F 3 115 Gle1 GLE1 RNA export mediator (yeast) 1426344_at 74412 F 3 116 Senp2 SUMO/sentrin specific peptidase 2 1451717_s_at 75826 F 3 117 2610306M01Rik RIKEN cDNA 2610306M01 gene 1452988_at 67170 F 3 118 4930453N24Rik RIKEN cDNA 4930453N24 gene 1449718_s_at 67609 F 3 119 Stx18 syntaxin 18 1453819_x_at 71116 F 3 120 Tspan13 tetraspanin 13 1460239_at 66109 F 3 121 Slc25a20 solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20 1423109_s_at 57279 F 3 122 Homer3 homer homolog 3 (Drosophila) 1424859_at 26558 F 3 123 Gm5871 /// Smndc1predicted gene 5871 /// survival motor neuron domain containing 1 1443396_at 545792 /// 76479 F 3 124 Smpd2 sphingomyelin phosphodiesterase 2, neutral 1416999_at 20598 F 3 125 5530601H04Rik RIKEN cDNA 5530601H04 gene 1452750_at 71445 F 3 126 Gla galactosidase, alpha 1418248_at 11605 F 3 127 Lrrc57 leucine rich repeat containing 57 1428312_at 66606 F 3 128 Isl2 insulin related protein 2 (islet 2) 1418676_at 104360 F 3 129 Dusp11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) 1452594_at 72102 F 3 130 B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 1420993_at 108105 F 3 131 Eif2s3x eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked 1423744_x_at 26905 F 3 132 Eif2s3x eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked 1451090_a_at 26905 F 3 133 2610029G23Rik RIKEN cDNA 2610029G23 gene 1417921_at 67683 F 3 134 Mrps9 mitochondrial ribosomal protein S9 1435843_x_at 69527 F 3 135 Eif2s3x /// LOC100048746eukaryotic translation