Downloaded from orbit.dtu.dk on: Dec 21, 2017 Metal stress modulates the immediate plasmid uptake potential of soil microbes Klümper, Uli; Dechesne, Arnaud; Riber, Leise; Gülay, Arda; Brandt, K.K.; Sørensen, S.; Smets, Barth F. Published in: Program. 13th Symposium on Bacterial Genetics and Ecology (BAGECO 13) Publication date: 2015 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Klümper, U., Dechesne, A., Riber, L., Gülay, A., Brandt, K. K., Sørensen, S., & Smets, B. F. (2015). Metal stress modulates the immediate plasmid uptake potential of soil microbes. 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BAGECO 13 13th Symposium on Bacterial Genetics and Ecology THE MICROBIAL CONTINUITY ACROSS CHANGING ECOSYSTEMS 14–18 June 2015 Milan, Italy PROGRAM © wikimedia.org/chris dorn www.bageco2015.org Program Overview BAGECO 13 Sun, 14 June 2015 Mon, 15 June 2015 Tue, 16 June 2015 Wed, 17 June 2015 Thu, 18 June 2015 08:30–10:20 08:30–10:40 08:30–10:20 09:00–10:30 Session I Session Ill Session V Session Vl continued Microbial diversity and Symbiosis as a driving Gradients in conventional Novel biodegradation functioning in the soil force of ecosystems Il and extreme habitats pathways along spatial ecosystem gradients II p. 15 p. 17 p. 20 p. 22 Industrial Exhibition & Coffee Break Coffee Break 10:50–12:40 11:10–12:20 10:50–12:20 11:00–12:30 Session II Session lV Session VI Session Vll Microbial diversity and The food to gut microbial Novel biodegradation Constructed microbial functioning in soil and non- continuity I pathways along spatial communities as a tool in conventional gradients I microbial ecology ecosystems ecosystems p.15 p. 17 p. 20 p. 22 12:30–13:00 Industrial Exhibition & Lunch Break Closing Lecture p. 23 13:40–15:10 13:20–14:50 13:20–15:10 13:00–13:15 Session III Session V Session Vll Farewell & Symbiosis as a driving The food to gut microbial Adaption and the role of announcements force of ecosystems I continuity Il p. 18 HGT p. 23 Industrial Exhibition & p. 16 Coffee Break p. 21 15:10–18:00 15:20–16:30 Poster Session I Round table: from with snacks & drinks microbial communities to single cells and back p. 18 16:30–19:30 17:00–17:30 p. 16 Poster Session II Opening BAGECO p. 14 with snacks & drinks 17:30–18:00 Opening Lecture p. 14 18:00–20:00 Welcome Reception p. 19 19:30–02:00 Social Evening & Party p. 14 p. 21 2 BAGECO 13 Table of contents Organization and Imprint ................................................................................................ 4 Welcome Note ................................................................................................................. 5 General Information ........................................................................................................ 6 How to find your way to the university ....................................................... 7 Local Network Map ....................................................................................... 8 Map of University ......................................................................................... 9 General Tips for Authors and Presenters ...................................................... 10 Sponsors, Exhibitors and Media Cooperations ................................................................. 11 Plan of Exhibition Area .................................................................................................... 12 Social Program ................................................................................................................. 13 Scientific Program ............................................................................................................ 14 Poster Presentations Monday, 15 June 2015 .................................................................................. 24 Tuesday, 16 June 2015 .................................................................................. 38 Abstracts ....................................................................................................................... 53 Index of Invited Speakers, Chairs and Presenting Abstract Authors ............................... 242 3 Organization and Imprint BAGECO 13 Venue Date University of Milan 14–18 June 2015 Via Festa del Perdono 7 • 20122 Milan (Italy) Conference Website www.bageco2015.org Conference Chair Daniele Daffonchio University of Milan Department of Food, Environmental and Nutritional Sciences via Celoria 2 • 20133 Milan (Italy) and King Abdullah University of Science and Technology (KAUST) BESE • Biological and Environmental Sciences and Engineering Division Thuwal • 23955-6900 (Kingdom of Saudi Arabia) Local Organizing Committee Sara Borin Elena Crotti Francesca Cappitelli Daniele Daffonchio Lucia Cavalca Francesca Mapelli Anna Corsini Federica Troiano International Scientific Committee Mark Bailey (United Kingdom) Pascal Simonet (France) Marco Bazzicalupo (Italy) Kornelia Smalla (Germany) Gabriele Berg (Austria) Christoph C. Tebbe (Germany) Janet Jansson (United States) James Tiedje (United States) Amalia Karagouni (Greece) Jan Dirk van Elsas (The Netherlands) Ines Mandic-Mulec (Slovenia) Timothy M. Vogel (France) James Prosser (United Kingdom) Elizabeth Wellington (United Kingdom) Conference Organization Conventus Congressmanagement & Marketing GmbH Claudia Tonn Carl-Pulfrich-Strasse 1 • 07745 Jena (DE) Phone +49 3641 31 16-374 • [email protected] • www.conventus.de Design/Layout Layout www.krea.tif–design.de Print www.kerndruck.de Circulation 400 Editorial Deadline 2 June 2015 4 BAGECO 13 Welcome Note Dear colleagues, The changing environments hide microbial continuities that are actually dissected following the novel approaches integrating ‘metaomics’ and novel cultivation based strategies. The 13th meet- ing on Bacterial Genetics and Ecology (BAGECO) intends to provide a forum for discussing all the aspects related to such microbial continuities along changing environments including large and small-scale gradients, chemoclines and environmental transitions. Biotic gradients, like those in the animal gut, and abiotic ones, where physicochemical variations occur, as well as the combina- tion of the two in relation to any complex ecosystems will be central focuses of the conference. We are pleased to welcome some of the most renowned scientists in microbial ecology to discuss all these aspects in relation to the most complex environments of earth including, among others, soil, sediments, the symbiotic ecosystems associated to plant, animals and humans, the aquatic ecosystems and the role of microbes and their metabolism in the protection of the environ- ment. The conference debate will be also discussing the advancement on our understanding of the role of gene flow and on how passing from empirical approaches to dissect microbial community functions to establishing the theories that rule out the microbial world and finally the functioning of earth. We are pleased that you are joining BAGECO 13 to report and learn about these topics and to enjoy the social networking with the scientific microbial ecology community in the wonderful city of Milan. We are happy to welcoming you to Milan. Professor Dr. Daniele Daffonchio Conference Chair 5 General Information BAGECO 13 Opening Hours Sunday Monday Tuesday Wednesday Thursday Industrial Exhibition – 10:00–18:00 10:30–19:30 10:00–15:30 – Poster Exhibition – 15:00–18:00 08:30–19:30 08:30–18:00 – Check-In 16:00–20:00 08:00–18:00 08:00–19:30 08:00–15:30 08:30–13:30 Media Check-In 16:00–19:00 08:00–18:00 08:00–19:30 08:00–15:30 08:30–11:00 Certificate of Attendance Certificates of attendance will be available on the last day of the conference at the check-in desk. Name Badge Please wear your name badge during all conference events, including the welcome reception and conference dinner. Admission to scientific sessions and to the industrial exhibition is restricted to participants wearing their badge. Internet Lounge and WIFI Access The internet lounge is located in the foyer area just outside the plenary hall “Aula Magna”. WIFI is available for free within the whole conference area. Network name: unimi-convegni (no password required) 6 BAGECO 13 How to find your way to the university 7 Local Network Map BAGECO 13 8 Via Francesco Sforza 20122 Milan,Italy 7 delPerdono, Via Festa Università © 13 BAGECO University degli Cortile 700 studi di Corridoio Aula Magna Milano Cortile d‘onore Porticato San Nazaro Aula Magna WC WC Porticato L. GO Richini Main entrance Via Festa del Perdono Key Check-In, Media Check-In, Cloakroom Porticato L. GO Richini/ Proticato San Nazaro Map ofUniversity Poster exhibition Plenary Hall Corridoio Aula Magna Industrial Exhibition Cortile