FACULTY FULL NAME AMAL MAHMOUD HUSSEIN SALEM POSITION Professor of Bioinformatics and Molecular Virology Personal Data Nationality |Egyptian Date of Birth |12/1/1968 Department |Biology Official Email | [email protected] Language Proficiency Language Read Write Speak Arabic Excellent Excellent Excellent English Excellent Excellent Excellent French Excellent Good Very good Academic Qualifications (Beginning with the most recent) Date Academic Degree Place of Issue Address 1990 BSc Cairo University Egypt 1994 MSc Cairo University-ORSTOM Egypt-France 2001 PhD Cairo University-CIRAD Egypt-France PhD, Master or Fellowship Research Title: (Academic Honors or Distinctions) PhD Biological and molecular characteristics of maize yellow stripe virus and its relationship with the leafhopper vector Master Characterization and serology of the leafhopper-borne maize yellow stripe tenuivirus in Egypt Fellowship Virus characterization and diagnosis, ORSTOM (Egypt-French project) Fellowship Molecular characterization and Bioinformatics analysis of MYSV (CIRAD Montpellier, France) Fellowship Bioinformatics analysis of CTV and its population structure (University of Davis-California, USA) Professional Record: (Beginning with the most recent) Job Rank Place and Address of Work Date Professor Imam Abdulrahman Bin Faisal Saudi Arabia 25-9-2019 Univ. Associate trainer certified by IBCT 19-9-2018 Associate professor Imam Abdulrahman Bin Faisal Saudi Arabia 3-1-2017 Univ. Head of Bioinformatics Dept. GEBRI-Sadat Univ. Egypt 2015-2016 Director manger Alkhwarizmi Center for Egypt 2013 Bioinformatics, Egypt 1 Associate professor GEBRI-Sadat Univ. Egypt 2012 Assistant professor GEBRI-Sadat Univ. Egypt 2005 Lecturer GEBRI-Sadat Univ. Egypt 2002 Post-Doc fellow UC-Davis USA 2001 Assistant lecturer Plant protection ins. Ministry of Egypt 1998 agric. PhD fellowship CIRAD-Montpellier France 1995 MSc fellowship French-Egyptian project Egypt 1991 (ORSTOM) Administrative Positions Held: (Beginning with the most recent) Administrative Position Office Date Head of Bioinformatics Dept. GEBRI-Sadat Univ., Egypt 2015 Director manger Alkhwarizmi Center for Bioinformatics, Egypt 2013 Head, community service committee Dept. Biology, College of Science, Imam Abdulrahman 2017 Bin Faisal Univ., KSA Head, administrative system committee GEBRI-Sadat Univ., Egypt 2015-2016 Scientific Achievements Refereed Scientific Research Papers Accepted for Publication Published Refereed Scientific Researches (In Chronological Order Beginning with the Most Recent) 1. Zidan, A. M., Saad, E. A., Ibrahim, N. E., Mahmoud, A., Hashem, M. H., Hemeida, A. A. (2020). PHARMIP: An insilico method to predict genetics that underpin adverse drug reactions. Methods. 7:1-14. 2. Elhefnawi, M. M., Hasan, M. E., Mahmoud, A., Khidr, Y. A., El-Absawy, E. A., Hemeida, A. A. (2019). Prediction and analysis of three dimensional structure of the p7-transactivated protein1 of hepatitis C virus. Infectious Disorders - Drug Targets. 19(1):55-66. 3. Essam M Janahi; Aboul-Ata E Aboul-Ata; I M El-Kalamawy; Amal Mahmoud; M S El-Ghanam; Kathleen Hefferon. (2017). HBV Genome, HbsAg Isolation and Virotherapy Innovation Using Plant System in the Middle East. HEPATITIS: A GLOBAL HEALTH CONCERN. Vol 2 Chapter 1 P 1-19. ISBN: 978-93-87500-05-1. 4. Elhefnawi, M. M., Hasan, M. E., Mahmoud, A., Khidr, Y. A., El-Absawy, E. A., Hemeida, A. A. (2017). In silico discovery of novel hepatitis c virus p7 transactivated protein1inhibitor by using structure-based virtual screening. J. Product. & Dev., 22(1): 103-119. 5. Mohamed Ezz, Amal Mahmoud, Fawzy A. El-Feky and Alaa A. Hemeida (2017). Searching and Analyzing for a Different Lengths of Microsatellite Repeats in the Completed Genome of Phoenix dactylifera Chloroplast, by Using Regular Expression builder –Language. International Journal of Science and Research (IJSR). 6 (8): 1296-1301. 6. El-aarag, S. Mahmoud, A., Hashem, M. H., Abd Elkader, H., Hemeida, A.E. and ElHefnawi M. (2017). In silico identification of potential key regulatory factors in smoking-induced lung cancer. BMC Medical Genomics 10:40. د. امال محمود.)2017(. المعلوماتيه الحيويه...افاق واعده في تشخيص اﻻمراض. مجلة التقدم العلمي . مجلد 97 . .7 8. Zidan A. M.; Alaa A. Hemeida and Amal Mahmoud (2016). The target to mediate Nitazoxanide's anti-HCV effect. In-silico study. Edition: 1st, Publisher: LAMBERT academic publishing, ISBN: 978-3-659-92424-8 2 9. Nadia S. El-Nahas, Gehan S. Sadek, Amal Mahmoud, Amany A. Rady, Salwa, F. Oshiba and Reham M. Barakat. (2015). Immunological, histopathological and immunohistochemical responses to a new B cell epitope-based vaccine against leishmaniasis in experimental mice. Journal of American Science 11(7). 10. Amal Mahmoud and Medhat H. Hashem (2014). Bioinformatics analysis of polymerase and envelope genes of Hepatitis B virus in Egypt. Egyptian J. Virol. 11 32-37. 11. Zidan, A. M., Hemeida, A. A., Mahmoud, A., Hashem, M. H., (2013). Glycogen Synthase Kinase 3 B prediction as primary cellular target to mediate anti- Hepatitis C effect of Nitazoxanide. 12. Ibrahim, A. I , Hemida A. A., Amal M. Hussain, Bekhit, M. and Amal , A. Zweil. (2013). Comparative Studies On Catharanthus sp. Cultivars using Chlorophyll Content and Peroxidase Isozyme. J. product. & Dev., 18(1):77-84. 13. El-Absawy, E.A , Khidr, Y.A. Mahmoud, A., Hasan, M.E. and Hemeida, A.A. (2012). Somatic Embryogenesis and Plant Regeneration Induced from Mature Seeds, Cotyledons and Shoot Tips of Cucumber. Journal of Productivityand Development. J. Product. & Dev., 17(2): 45- 61. 14. Khidr, Y.A. Mahmoud, A. El-Absawy, E.A. Hemeida, A.A. and Hasan, M.E. (2012). Production of Transgenic Cucumber Plantlets containing Sequences from Watermelon Mosaic Virus-II fused with GFP Gene. Egypt. J. Genet. Cytol. 41(1):19-35. 15. Mahmoud, A. (2012). Comparative sequence analysis and epitope prediction of the partial glycoprotein G gene of bovine ephemeral fever virus isolate from Egypt. Egyptian J. Virol. 9 (1) 49-58. 16. Amal Mahmoud and Medhat H. Hashem. (2012). Phylogenetic subtyping of hepatitis C virus 5' UTR isolated in Egypt and the effect of 2 transitions in subdomain IIId on the apical loop structure. Life Science J. 9(1):903-909. 17. Zaghloul, A. H., Mahmoud, Amal, Hassan, H. Y., Hemeida, A. A., Nayel, M. A. and Zaghawa, A. A. (2012). Establishment of dot-blot hybridization for diagnosis of bovine ephemeral fever virus in Egypt. International J. Virol. 8 (3) 271-278. 18. El-Absawy, E.A; Amal Mahmoud, A.A. Hemeida and M. Helmy (2012). Molecular variation of Potato virus Y isolated from Egypt. International J. Virol. 8 (1) 81-89. 19. Hemeida, A. A.; M. Osman; Mohamed El-Shahat; Medhat H. Hashem; Amal Mahmoud and Hosni Dahi (2011). Genetic variations in a conserved 5'-Untranslated region of hepatitis C virus isolated from Egypt. International J. Virol, 7(3) 91-99. 20. Ibrahim A. I, Hemeida A. A, Nower, A. A., Amal Mahmoud, Salwa N. Zein and Asmaa abdelmordy (2009). Antiserum production and molecular detection of Potato virus X and Potato virus Y. Egyptian J. Virol., 6:273- 285. 21. El-Araby, W., S., Ibrahim, I., A., Hemeida, A., A., Mahmoud, Amal, Soliman, A. M. El-Attar, A. K., and Mazyad, H. M. (2009). Biological, serological and molecular diagnosis of three major potato viruses in Egypt. International journal of virology 5 (2): 77-88. 22. Ammar E.-D., Aboul-Ata A. E.and Mahmoud, A. (2009). Maize virus diseases, “in Virus Diseases affecting crops in the Arab world”. Beirut, Lebanon, 970 pp. 23. Mahmoud A., Royer M., Granier M., Ammar E.-D. and Peterschmitt M. (2007). High genetic identity between RNA 3 segment of an Old World isolate and a New World isolate of Maize stripe virus. Arch Virol 152: 1583-1586. 24. Mahmoud A., Royer M., Granier M., Ammar E.-D., Thouvenel J.-C. and Peterschmitt M. (2007). Evidence for a segmented genome and partial nucleotide sequences of Maize yellow stripe virus, a proposed new tenuivirus. Arch Virol 152: 1757-1762. 25. Ammar E.-D., Khlifa E. A., Mahmoud A., Abol-Ela S. E. and Peterschmitt M. (2007). Evidence for multiplication of the leafhopper-borne maize yellow stripe virus in its vector using ELISA and dot-blot hybridization. Arch Virol 152: 489-494. 3 26. Mahmoud A. (2001). Ph.D. (Biological and molecular characteristics of maize yellow stripe virus and its relationship with the leafhopper vector). M.Sc. thesis, Cairo University, pp154. 27. Mahmoud A. H., Thouvenel J. C., Abol Ela S. E., Sewify G. H. and Ammar E. D. (1996). Detection of maize yellow stripe tenui-like virus by ELISA and dot-blot tests in host plants and leafhopper vector in Egypt. Phytopath. medit. 35, 19-23. 28. Thouvenel J. C., Abol Ela S. E., Sewify G. H., El-Hariry M., Mahmoud A. H. and Ammar E. D. (1996). Characterization and serology of the leafhopper-borne maize yellow stripe tenuivirus in Egypt. Bull. Fac. Agric., Cairo Univ. 47, 179-190. 29. Amal Mahmoud Hussein et Laurent Bigarre. (1995). Diagnostic du virus des rayures jaunes du mais en Egypte. Nouvelles scientifiques. PP 78. 30. Mahmoud A. (1994). M. Sc. (Characterization and serology of the leafhopper-borne maize yellow stripe tenuivirus in Egypt). Ph.D. thesis, Cairo University, pp75. Scientific Research Papers Presented to Refereed Specialized Scientific Conferences 1. Mahmoud A. H., Royer M., Granier M., Ammar E. D., Thouvenel J. C. and Peterschmitt M. (1997). Biological and molecular characterization of the leafhopper-borne maize yellow stripe tenuivirus from Egypt. In: Societe Francaise de Phytopathologie., Proceedings of the 10th congress of the mediterranean phytopathological union. June 1st-5th, 1997, Montpellier, France. P. 349-350. 2. Mahmoud A., Granier M., Peterschmitt M., Abul-Ela S. and Ammar E. D. (2001). Multiplication of maize yellow stripe virus in its leafhopper vector, Cicadulina chinai. First conference on Integrated Pest Management (IPM) At the college of Agriculture, Cairo University, Giza, Egypt on 22nd-23rd April, 2001. 3. Mahmoud A., Sheta H., Grafton-Cardwell E., polek M., Gumpf D., Falk B.