FLIGHT ATTENDANT MEDICAL RESEARCH INSTITUTE PUBLICATIONS AND PRESENTATIONS 2002-2013 Table of Contents Table of Contents................................................................................................................ 2 2013..................................................................................................................................... 4 Publications 2013............................................................................................................ 4 Presentations and Abstracts 2013 ................................................................................... 8 Book Chapters, etc., 2013............................................................................................. 11 2012................................................................................................................................... 12 Publications 2012.......................................................................................................... 12 Presentations and Abstracts 2012 ................................................................................. 34 Book Chapters, etc., 2012............................................................................................. 45 2011................................................................................................................................... 46 Publications 2011.......................................................................................................... 46 Presentations and Abstracts 2011 ................................................................................. 80 Book Chapters, etc., 2011............................................................................................. 93 2010................................................................................................................................... 94 Publications 2010.......................................................................................................... 94 Presentations and Abstracts 2010 ............................................................................... 128 Book Chapters, etc., 2010........................................................................................... 154 2009................................................................................................................................. 156 Publications 2009........................................................................................................ 156 Presentations and Abstracts 2009 ............................................................................... 192 Book Chapters, etc., 2009........................................................................................... 211 2008................................................................................................................................. 213 Publications 2008........................................................................................................ 213 Presentations and Abstracts 2008 ............................................................................... 241 Book Chapters, etc., 2008........................................................................................... 252 2007................................................................................................................................. 254 Publications 2007........................................................................................................ 254 Presentations and Abstracts 2007 ............................................................................... 272 Book Chapters, etc., 2007........................................................................................... 280 2006................................................................................................................................. 281 Publications 2006........................................................................................................ 281 Presentations and Abstracts 2006 ............................................................................... 296 Book Chapters, etc., 2006........................................................................................... 302 2005................................................................................................................................. 303 Publications 2005........................................................................................................ 303 Presentations and Abstracts 2005 ............................................................................... 317 Book Chapters, etc., 2005........................................................................................... 322 2004................................................................................................................................. 323 Publications 2004........................................................................................................ 323 Presentations and Abstracts 2004 ............................................................................... 331 Book Chapters, etc., 2004........................................................................................... 333 2003................................................................................................................................. 335 Publications 2003........................................................................................................ 335 Presentations and Abstracts 2003 ............................................................................... 339 2 Book Chapters, etc., 2003........................................................................................... 341 2002................................................................................................................................. 342 Publications 2002........................................................................................................ 342 Presentations and Abstracts 2002 ............................................................................... 343 Book Chapters, etc., 2002........................................................................................... 344 3 FAMRI Publications 2013 2013 Publications 2013 Apelberg BJ, Hepp LM, Avila-Tang E, Gundel L, Hammond SK, , Hovell MF, Hyland A, Klepeis NE, Madsen C, Navas-Acien A, Repace J, Samet JM, Breysse P. Environmental monitoring of secondhand tobacco smoke exposure. Tob Control 2013;22(3):147-155. Avila-Tang E, Al-Delaimy W, Ashley DL, Benowitz NL, Bernert JT, Kim S, Samet JM, Hecht SS. Assessing secondhand smoke exposure using biological markers. Tob Control 2013 May;(3):164-171. Avila-Tang E, Elf JL, Cummings KM, Fong GT, Hovell MF, Klein JD, McMillen R, Winickoff JP, Samet JM. Assessing secondhand smoke exposure with reported measures. Tob Control 2013;22(3):156-163. Baños-Lara Mdel R, Ghosh A, Guerrero-Plata A. Critical role of MDA5 in the interferon response induced by human metapneumovirus infection in dendritic cells and in vivo. J Virol 2013; 87(2):1242-1251. Benowitz NL, Dempsey D, Tyndale RF, St Helen G, Jacob P 3rd. Dose-independent kinetics with low level exposure to nicotine and cotinine. Br J Clin Pharmacol 2013;75(1):277-279. Brait M, Munari E, Lebron C, Noordhuis MG, Begum S, Michailidi C, Gonzalez-Roibon N, Maldonado L, Sen T, Guerrero-Preston R, Cope L, Parrella P, Fazio VM, Ha PK, Netto GJ, Sidransky D, Hoque MO. Genome-wide methylation profiling and the PI3K- AKT pathway analysis associated with smoking in urothelial cell carcinoma. Cell Cycle 2013;12(7). Carson JL, Brighton LE, Collier AM, Bromberg PA. Correlative ultrastructural investigations of airway epithelium following experimental exposure to defined air pollutants and lifestyle exposure to tobacco smoke. Inhal Toxicol 2013;25(3):134-140. Crane-Godreau MA, Payne P. A history of secondhand smoke exposure: are we asking the right questions? Front Physiol 2013;4:25. D'Armiento JM, Goldklang MP, Hardigan AA, Geraghty P, Roth MD, Connett JE, Wise RA, Sciurba FC, Scharf SM, Thankachen J, Islam M, Ghio AJ, Foronjy RF. Increased matrix metalloproteinase (MMPs) levels do not predict disease severity or progression in emphysema. PLoS One 2013;8(2):e56352. Deng X, Weerapana E, Ulanovskaya O, Sun F, Liang H, Ji Q, Ye Y, Fu Y, Zhou L, Li J, Zhang H, Wang C, Alvarez S, Hicks LM, Lan L, Wu M, Cravatt BF, He C. Proteome- wide quantification and characterization of oxidation-sensitive cysteines in pathogenic bacteria. Cell Host Microbe 2013;13(3):358-370. DiFranza J, Wellman R, Savageau JA, Beccia A, Ursprung WWSA, McMillen R. What aspect of dependence does the Fagerström Test for Nicotine Dependence Measure? ISRN Addiction 2013;2013:Article ID 906276, 8 pages Available at http://www.hindawi.com/isrn/addiction/2013/906276/. 4 FAMRI Publications 2013 Dominissini D, Moshitch-Moshkovitz S, Salmon-Divon M, Amariglio N, Rechavi G. Transcriptome-wide mapping of N6-methyladenosine by m6A-seq based on immunocapturing and massively parallel sequencing. Nat Protoc 2013;8(1):176-189. Eppert BL, Wortham BW, Flury JL, Borchers MT. Functional characterization of T cell populations in a mouse model of chronic obstructive pulmonary disease. J Immunol 2013;190(3):1331-1340. Gally F, Chu HW, Bowler RP. Cigarette smoke decreases airway epithelial FABP5 expression and promotes Pseudomonas aeruginosa infection. PLoS One 2013;8(1):e51784. García-Esquinas E, Loeffler LF, Weaver VM, Fadrowski JJ, Navas-Acien A. Kidney function and