Regulatory Links Between Imprinted Genes: Evolutionary Predictions and Consequences

1 Research outputsListing of Research outputsRegulatory links between imprinted genes: Evolutionary predictions and consequencesPatten, M. M., Cowley, M., Oakey, R. J.& Feil, R. 3 Feb 2016In : Proceedings of the Royal Society B: Biological Sciences.283, 1824, 20152760Research output: Contribution to journal› ArticleNetwork-informed gene ranking tackles genetic heterogeneity in exome-sequencing studies of monogenic diseaseDand, N., Schulz, R., Weale, M. E., Southgate, L., Oakey, R. J., Simpson, M. A.& Schlitt, T.1 Dec 2015In : Human Mutation.36, 12, p. 1135-114410 p.Research output: Contribution to journal› ArticleGenome-wide methylation analysis in Silver-Russell syndrome patientsPrickett, A. R., Ishida, M., Böhm, S., Frost, J. M., Puszyk, W., Abu-Amero, S., Stanier, P., Schulz, R., Moore, G. E. & Oakey, R. J.Mar 2015In : Human genetics.134, 3, p. 317-3216 p.Research output: Contribution to journal› ArticleImprinted gene expression in hybrids: perturbed mechanisms and evolutionary implicationsWolf, J. B., Oakey, R. J.& Feil, R. Aug 2014In : Heredity.113, 2, p. 167-1759 p.Research output: Contribution to journal› ArticleDevelopmental Programming Mediated by Complementary Roles of Imprinted Grb10 in Mother and PupCowley, M., Garfield, A. S., Madon-Simon, M., Charalambous, M., Clarkson, R. W., Smalley, M. J., Kendrick, H., Isles, A. R., Parry, A. J., Carney, S., Oakey, R. J., Heisler, L. K., Moorwood, K., Wolf, J. B. & Ward, A. 25 Feb 2014In : PL o S Biology.12, 2, 13 p., e1001799Research output: Contribution to journal› ArticleGenomewide and parental allele-specific analysis of CTCF and cohesin DNA binding in mouse brain reveals a tissue-specific binding pattern and an association with imprinted differentially methylated regionsPrickett, A. R., Barkas, N., McCole, R. B., Hughes, S., Amante, S. M., Schulz, R.& Oakey, R. J.Oct 2013In : Genome Research.23, 10, p. 1624-163512 p.Research output: Contribution to journal› ArticleThe epigenetic regulator PLZF represses L1 retrotransposition in germ and progenitor cellsPuszyk, W., Down, T., Grimwade, D., Chomienne, C., Oakey, R. J., Solomon, E.& Guidez, F.3 Jul 2013In : The EMBO journal.32, 13, p. 1941-195212 p.Research output: Contribution to journal› ArticleTransposable Elements Re-Wire and Fine-Tune the TranscriptomeCowley, M.& Oakey, R. J.24 Jan 2013In : PL o S Genetics.9, 1, p. N/A7 p., e1003234Research output: Contribution to journal› Literature reviewResetting for the Next GenerationCowley, M.& Oakey, R. J.28 Dec 2012In : MOLECULAR CELL.48, 6, p. 819-8213 p., N/AResearch output: Contribution to journal› EditorialEpigenetic control of alternative mRNA processing at the imprinted Herc3/Nap1l5 locusCowley, M., Wood, A. J., Böhm, S., Schulz, R.& Oakey, R. J.Oct 2012In : Nucleic Acids Research.40, 18, p. 8917-892610 p.Research output: Contribution to journal› ArticleProtection against De Novo Methylation Is Instrumental in Maintaining Parent-of-Origin Methylation Inherited from the GametesProudhon, C., Duffié, R., Ajjan, S., Cowley, M., Iranzo, J., Carbajosa, G., Saadeh, H., Holland, M. L., Oakey, R. J., Rakyan, V. K., Schulz, R.& Bourc'his, D. 28 Sep 2012In : MOLECULAR CELL.47, 6, p. 909–92012 p.Research output: Contribution to journal› ArticleA survey of tissue-specific genomic imprinting in mammalsPrickett, A. R.& Oakey, R. J.Aug 2012In : Molecular Genetics and Genomics: an international journal.287, 8, p. 621-63010 p.Research output: Contribution to journal› ArticleHuman imprinted retrogenes exhibit non-canonical imprint chromatin signatures and reside in non- imprinted host genesMonk, D., Arnaud, P., Frost, J. M., Wood, A. J., Cowley, M., Martin-Trujillo, A., Guillaumet-Adkins, A., Platas, I. I., Camprubi, C., Bourc'his, D., Feil, R., Moore, G. E. & Oakey, R. J.Jun 2011In : Nucleic Acids Research.39, 11, p. 4577 - 458610 p.Research output: Contribution to journal› ArticleA CASE-BY-CASE EVOLUTIONARY ANALYSIS OF FOUR IMPRINTED RETROGENESMcCole, R. B., Loughran, N. B., Chahal, M., Fernandes, L. P., Roberts, R. G., Fraternali, F., O'Connell, M. J. & Oakey, R. J.May 2011In : EVOLUTION.65, 5, p. 1413 - 142715 p.Research output: Contribution to journal› ArticleThe role of imprinted genes in humansMoore, G. & Oakey, R.21 Mar 2011In : GENOME BIOLOGY.12, 3, 106Research output: Contribution to journal› EditorialShort Interspersed Element (SINE) Depletion and Long Interspersed Element (LINE) Abundance Are Not Features Universally Required for ImprintingCowley, M., de Burca, A., McCole, R. B., Chahal, M., Saadat, G., Oakey, R. J.& Schulz, R.2011In : PL o S One .6, 4, e18953Research output: Contribution to journal› ArticleThe Parental Non-Equivalence of Imprinting Control Regions during Mammalian Development and EvolutionSchulz, R., Proudhon, C., Bestor, T. H., Woodfine, K., Lin, C-S., Lin, S-P., Prissette, M., Oakey, R. J.& Bourc'his, D. Nov 2010In : PL o S Genetics.6, 11, e1001214Research output: Contribution to journal› ArticleSegmental Paternal Uniparental Disomy (patUPD) of 14q32 With Abnormal Methylation Elicits the Characteristic Features of Complete patUPD14Irving, M., Buiting, K., Kanber, D., Donaghue, C., Schulz, R., Offiah, A., Mohammed , S.& Oakey, R. J.Aug 2010In : American Journal of Medical Genetics. Part A.152A, 8, p. 1942 - 19509 p.Research output: Contribution to journal› ArticleRetrotransposition and genomic imprintingCowley, M.& Oakey, R. J.29 Jun 2010In : Briefings In Functional Genomics.9, 4, p. 340 - 3467 p., elq015Research output: Contribution to journal› ArticleTranscriptional profiles underlying parent-of-origin effects in seeds of Arabidopsis thalianaTiwari, S., Spielman, M., Schulz, R., Oakey, R. J., Kelsey, G., Salazar, A., Zhang, K., Pennell, R. & Scott, R. J. 20 Apr 2010In : Bmc Plant Biology.10, 72Research output: Contribution to journal› ArticleJagged1 is a competitive inhibitor of Notch signaling in the embryonic pancreasGolson, M. L., Le Lay, J., Gao, N., Braemswig, N., Loomes, K. M., Oakey, R., May, C. L., White, P. & Kaestner, K. H. Aug 2009In : Mechanisms of Development.126, 8-9, p. 687 - 69913 p.Research output: Contribution to journal› ArticleDuctal Malformation and Pancreatitis in Mice Caused by Conditional Jag1 DeletionGolson, M. L., Loomes, K. M., Oakey, R.& Kaestner, K. H. May 2009In : Gastroenterology.136, 5, p. 1761 - 177111 p.Research output: Contribution to journal› ArticleGenomic imprinting in Singapore Workshop on Genomic ImprintingLoppin, B. & Oakey, R.2009In : EMBO REPORTS.10, 3, p. 222 - 2276 p.Research output: Contribution to journal› EditorialTranscript- and tissue-specific imprinting of a tumour suppressor geneSchulz, R., McCole, R. B., Woodfine, K., Wood, A. J., Chahal, M., Monk, D., Moore, G. E. & Oakey, R. J.2009In : Human Molecular Genetics.18, 1, p. 118 - 12710 p.Research output: Contribution to journal› ArticleMATERNALLY EXPRESSED PAB C-TERMINAL, a Novel Imprinted Gene in Arabidopsis, Encodes the Conserved C-Terminal Domain of Polyadenylate Binding ProteinsTiwari, S., Schulz, R., Ikeda, Y., Dytham, L., Bravo, J., Mathers, L., Spielman, M., Guzman, P., Oakey, R. J., Kinoshita, T. & Scott, R. J. Sep 2008In : Plant Cell.20, 9, p. 2387 - 239812 p.Research output: Contribution to journal› ArticleUnwitting hosts fall victim to imprintingMcCole, R. B. & Oakey, R. J.Sep 2008In : Epigenetics.3, 5, p. 258 - 2603 p.Research output: Contribution to journal› ArticleRegulation of alternative polyadenylation by genomic imprintingWood, A. J., Schulz, R., Woodfine, K., Koltowska, K., Beechey, C. V., Peters, J., Bourc'his, D. & Oakey, R. J.1 May 2008In : Genes and Development.22, 9, p. 1141 - 11466 p.Research output: Contribution to journal› ArticleWAMIDEX: A web atlas of murine genomic imprinting and differential expression.Schulz, R., Woodfine, K., Menheniott, T., Bourc'his, D., Bestor, T. & Oakey, R. J.Mar 2008In : Epigenetics.3, 2, p. 89 - 968 p.Research output: Contribution to journal› ArticleG9a histone methyltransferase contributes to imprinting in the mouse placentaWagschal, A., Sutherland, H. G., Woodfine, K., Henckel, A., Chebli, K., Schulz, R., Oakey, R. J., Bickmore, W. A. & Feil, R. Feb 2008In : Molecular and Cellular Biology.28, 3, p. 1104 - 111310 p.Research output: Contribution to journal› ArticleGenomic imprinting of Dopa decarboxylase in heart and reciprocal allelic expression with neighboring Grb10Menheniott, T. R., Woodfine, K., Schulz, R., Wood, A. J., Monk, D., Giraud, A. S., Baldwin, H. S., Moore, G. E. & Oakey, R. J.Jan 2008In : Molecular and Cellular Biology.28, 1, p. 386 - 39611 p.Research output: Contribution to journal› ArticleAllele-specific demethylation at an imprinted mammalian promoterWood, A. J., Bourc'his, D., Bestor, T. H. & Oakey, R. J.Nov 2007In : Nucleic Acids Research.35, 20, p. 7031 - 70399 p.Research output: Contribution to journal› ArticleBile duct proliferation in liver-specific Jag1 conditional knockout mice: Effects of gene dosageLoomes, K. M., Russo, P., Ryan, M., Nelson, A., Underkoffler, L., Glover, C., Fu, H., Gridley, T., Kaestner, K. H. & Oakey, R. J.Feb 2007In : Hepatology.45, 2, p. 323 - 3308 p.Research output: Contribution to journal› ArticleA screen for retrotransposed imprinted genes reveals an association between X chromosome homology and maternal germ-line methylation.Wood, A. J., Roberts, R. G., Monk, D., Moore, G. E., Schulz, R.& Oakey, R. J.2007In : PL o S Genetics.3, 2, p. 192 - 20312 p., e20Research output: Contribution to journal› ArticleNondisjunction and transmission ratio distortion of Chromosome 2 in a (2.8) Robertsonian translocation mouse strainSchulz, R., Underkoffler, L. A., Collins, J. N. & Oakey, R. J.Mar 2006In : Mammalian Genome.17, 3, p. 239 - 2479 p.Research output: Contribution to journal› ArticleChromosome-wide identification of novel imprinted genes using microarrays and uniparental disomiesSchulz, R., Menheniott, T. R., Woodfine, K., Wood, A. J., Choi, J. D.& Oakey, R. J.2006In : Nucleic Acids Research.34, 12, p. e88 e88Research output: Contribution to journal› ArticleGenomic imprinting in mammals: Emerging themes and established theoriesWood, A. J. & Oakey, R. J.2006In : PL o S Genetics.2, 11, p. 1677 - 16859 p., e147Research output: Contribution to journal› Literature reviewA novel variant of Inpp5f is imprinted in brain and its expression is correlated with differential methylation of an internal exonic CpG island.Choi, J., Underkoffler, L., Wood, A., Collins, J., Williams, P., Golden, J., Shuster, E., Loomes, K. & Oakey, R.Jul 2005In : Molecular and Cellular Biology.25, 13, p. 5514 - 55229 p.Research output: Contribution to journal› ArticleTransmission ratio distortion in offspring of mouse heterozygous carriers of a (7.18) Robertsonian translocationUnderkoffler, L. A., Mitchell, L. E., Abdulali, Z. S., Collins, J. N. & Oakey, R. J.Feb 2005In : Genetics.169, 2, p. 843 - 8486 p.Research output: Contribution to journal› ArticleImprinted gene detection in Arabidopsis thaliana.Schulz, R., Tiwari, S., Scott, R. & Oakey, R.2005Unknown.Paris: Unknown PublisherResearch output: Chapter in Book/Report/Conference proceeding› Conference paperFacial features in Alagille syndromeKamath, B. M., Loomes, K. M., Piccoli, D. A., Emerick, K. E. M., Oakey, R. J., Spinner, N. B. & Krantz, I. D. 15 Jan 2004In : American Journal of Medical Genetics.124A, 2, p. 222 - 2232 p.Research output: Contribution to journal› LetterFamilial basaloid follicular hamartoma: lesional characterization and review of the literatureJih, D. M., Shapiro, M., James, W. D., Levin, M., Gelfand, J., Williams, P. T., Oakey, R. J., Fakharzadeh, S. & Seykora, J. T. Apr 2003In : American Journal of Dermatopathology.25, 2, p. 130 - 1378 p.Research output: Contribution to journal› ArticleAn Application of Molecular Genotyping in MiceUnderkoffler, L. A., Collins, J. N., Choi, J. D.& Oakey, R. J.2003In : BIOLOGICAL PROCEDURES ONLINE.5, 1, p. 116 - 1227 p.Research output: Contribution to journal› ArticleSupernumerary digital flexion creases: an additional clinical manifestation of Alagille syndromeKamath, B. M., Loomes, K. M., Oakey, R. J.& Krantz, I. D. 1 Nov 2002In : American Journal of Medical Genetics.112, 2, p. 171 - 1755 p.Research output: Contribution to journal› ArticleCharacterization of Notch receptor expression in the developing mammalian heart and liverLoomes, K. M., Taichman, D. B., Glover, C. L., Williams, P. T., Markowitz, J. E., Piccoli, D. A., Baldwin, H. S. & Oakey, R. J.1 Oct 2002In : American Journal of Medical Genetics.112, 2, p. 181 - 1899 p.Research output: Contribution to journal› ArticleFacial features in Alagille syndrome: specific or cholestasis facies?Kamath, B. M., Loomes, K. M., Oakey, R. J., Emerick, K. E., Conversano, T., Spinner, N. B., Piccoli, D. A. & Krantz, I. D. 1 Oct 2002In : American Journal of Medical Genetics.112, 2, p. 163 - 1708 p.Research output: Contribution to journal› ArticleNotch1 and Jagged1 expression by the developing pulmonary vasculatureTaichman, D. B., Loomes, K. M., Schachtner, S. K., Guttentag, S., Vu, C., Williams, P., Oakey, R. J.& Baldwin, H. S. 1 Oct 2002In : Developmental Dynamics.225, 2, p. 166 - 17510 p.Research output: Contribution to journal› ArticleImprinted genes: identification by chromosome rearrangements and post-genomic strategiesOakey, R. J.& Beechey, C. V. 1 Jul 2002In : Trends in Genetics.18, 7, p. 359 - 3668 p.Research output: Contribution to journal› Literature reviewMolecular analysis of nondisjunction in mice heterozygous for a robertsonian translocationUnderkoffler, L. A., Mitchell, L. E., Localio, A. R., Marchegiani, S. M., Morabito, J., Collins, J. N. & Oakey, R. J.2002In : Genetics.161, 3, p. 1219 - 12246 p.Research output: Contribution to journal› ArticleRegulation of vascular smooth muscle cell growth and adhesion by paired-related homeobox genes.Jones, F. S., McKean, D. M., Meech, R., Edelman, D. B., Oakey, R. J.& Jones, P. L. 2002In : Chest.121, 3, p. 89S - 90SResearch output: Contribution to journal› Conference paperPrx1 controls vascular smooth muscle cell proliferation and tenascin-C expression and is upregulated with Prx2 in pulmonary vascular diseaseJones, F. S., Meech, R., Edelman, D. B., Oakey, R. J.& Jones, P. L. 20 Jul 2001In : Circulation Research.89, 2, p. 131 - 1388 p.Research output: Contribution to journal› ArticleMicroarray expression profiling of tissues from mice with uniparental duplications of chromosomes 7 and 11 to identify imprinted genesChoi, J. D., Underkoffler, L. A., Collins, J. N., Marchegiani, S. M., Terry, N. A., Beechey, C. V. & Oakey, R. J.2001In : Mammalian Genome.12, 10, p. 758 - 7647 p.Research output: Contribution to journal› ArticleThe expression of Jagged1 in the developing mammalian heart correlates with cardiovascular disease in Alagille syndromeLoomes, K. M., Underkoffler, L. A., Morabito, J., Gottlieb, S., Piccoli, D. A., Spinner, N. B., Baldwin, H. S. & Oakey, R. J.Dec 1999In : Human Molecular Genetics.8, 13, p. 2443-97 p.Research output: Contribution to journal› ArticleMouse chromosome 7Williams, R. W., Angel, J. M., Holdener, B. C., Oakey, R.& Hunter, K. W. Oct 1999In : Mammalian Genome.10, 10, p. 947Research output: Contribution to journal› ArticleCharacterization of CDC45L: a gene in the 22q11.2 deletion region expressed during murine and human developmentShaikh, T. H., Gottlieb, S., Sellinger, B., Chen, F., Roe, B. A., Oakey, R. J., Emanuel, B. S. & Budarf, M. L. Mar 1999In : Mammalian Genome.10, 3, p. 322-3265 p., N/AResearch output: Contribution to journal› ArticleGoosecoid-like, a gene deleted in DiGeorge and velocardiofacial syndromes, recognizes DNA with a bicoid- like specificity and is expressed in the developing mouse brainGottlieb, S., Hanes, S. D., Golden, J. A., Oakey, R. J.& Budarf, M. L. Sep 1998In : Human Molecular Genetics.7, 9, p. 1497-5059 p.Research output: Contribution to journal› ArticleA very large protein with diverse functional motifs is deficient in rjs (runty, jerky, sterile) miceLehman, A. L., Nakatsu, Y., Ching, A., Bronson, R. T., Oakey, R. J., Keiper-Hrynko, N., Finger, J. N., Durham-Pierre, D., Horton, D. B., Newton, J. M., Lyon, M. F. & Brilliant, M. H. 4 Aug 1998In : Proceedings of the National Academy of Sciences of the United States of America.95, 16, p. 9436-94416 p., N/AResearch output: Contribution to journal› ArticleEncyclopedia of the mouse genome VII. Mouse chromosome 7Williams, R. W., Holdener, B. C., Angel, J. M., Oakey, R.& Hunter, K. W. 1998In : Mammalian Genome.8 Spec No, p. S136-59Research output: Contribution to journal› ArticleMolecular analysis of the cDNAs encoded by the pun and pJ alleles of the pink-eyed dilution locusOakey, R., Keiper, N. M., Ching, A. S. & Brilliant, M. H. Apr 1996In : Mammalian Genome.7, 4, p. 315-62 p.Research output: Contribution to journal› ArticleNondisjunction rates and abnormal embryonic development in a mouse cross between heterozygotes carrying a (7, 18) robertsonian translocation chromosomeOakey, R., Matteson, P. G., Litwin, S., Tilghman, S. M. & Nussbaum, R. L. Oct 1995In : Genetics.141, 2, p. 667-748 p.Research output: Contribution to journal› ArticleMouse chromosome 7Brilliant, M. H., Williams, R. W., Conti, C. J., Angel, J. M., Oakey, R. J.& Holdener, B. C. 1994In : Mammalian Genome.5 Spec No, p. S104-23Research output: Contribution to journal› ArticleLocalization of DNA sequences required for human centromere function through an analysis of rearranged Y chromosomesTyler-Smith, C., Oakey, R. J., Larin, Z., Fisher, R. B., Crocker, M., Affara, N. A., Ferguson-Smith, M. A., Muenke, M., Zuffardi, O. & Jobling, M. A. Dec 1993In : Nature Genetics.5, 4, p. 368-758 p.Research output: Contribution to journal› ArticleConstruction of a physical map on mouse and human chromosome 1: comparison of 13 Mb of mouse and 11 Mb of human DNAOakey, R., Watson, M. L. & Seldin, M. F. Nov 1992In : Human Molecular Genetics.1, 8, p. 613-6208 p., N/AResearch output: Contribution to journal› ArticleA linkage map of mouse chromosome 19: definition of comparative mapping relationships with human chromosomes 10 and 11 including the MEN1 locusRochelle, J. M., Watson, M. L., Oakey, R. J.& Seldin, M. F. Sep 1992In : Genomics.14, 1, p. 26-316 p.Research output: Contribution to journal› ArticleChromosomal mapping of the human (MACS) and mouse (Macs) genes encoding the MARCKS proteinBlackshear, P. J., Tuttle, J. S., Oakey, R. J., Seldin, M. F., Chery, M., Philippe, C. & Stumpo, D. J. Sep 1992In : Genomics.14, 1, p. 168-1747 p., N/AResearch output: Contribution to journal› ArticleChromosomal mapping of the high affinity Fc gamma receptor geneOakey, R. J., Howard, T. A., Hogarth, P. M., Tani, K. & Seldin, M. F. Mar 1992In : Immunogenetics.35, 4, p. 279-2824 p., N/AResearch output: Contribution to journal› ArticleA linkage map of mouse chromosome 1 using an interspecific cross segregating for the gld autoimmunity mutationWatson, M. L., D'Eustachio, P., Mock, B. A., Steinberg, A. D., Morse, H. C., Oakey, R. J., Howard, T. A., Rochelle, J. M. & Seldin, M. F. 1992In : Mammalian Genome.2, 3, p. 158-7114 p.Research output: Contribution to journal› ArticleThe human TTP protein: sequence, alignment with related proteins, and chromosomal localization of the mouse and human genesTaylor, G. A., Lai, W. S., Oakey, R. J., Seldin, M. F., Shows, T. B., Eddy, R. L. & Blackshear, P. J. 25 Jun 1991In : Nucleic Acids Research.19, 12, p. 3454Research output: Contribution to journal› ArticleGenomic organization of adrenergic and serotonin receptors in the mouse: linkage mapping of sequence- related genes provides a method for examining mammalian chromosome evolutionOakey, R., Caron, M. G., Lefkowitz, R. J. & Seldin, M. F. Jun 1991In : Genomics.10, 2, p. 338-447 p.Research output: Contribution to journal› ArticleY chromosome DNA haplotyping suggests that most European and Asian men are descended from one of two malesOakey, R.& Tyler-Smith, C. Jul 1990In : Genomics.7, 3, p. 325-306 p.Research output: Contribution to journal› ArticleAnalysis of transcription initiation in the Panolis flammea nuclear polyhedrosis virus polyhedrin geneOakey, R., Cameron, I. R., Davis, B., Davis, E., Possee, R. D. & Oakey, R.Mar 1989In : Journal of General Virology.70, 3, p. 769-7757 p., N/AResearch output: Contribution to journal› ArticleThe above report is produced using the following setupOrdered by: null

Regulatory Links Between Imprinted Genes: Evolutionary Predictions and Consequences

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