The Taxonomicon Systema Naturae 2000 Classification of Domain Bacteria (prokaryotes) down to Phylum Compiled by Drs. S.J. Brands Universal Taxonomic Services 6 Nov 2017 Systema Naturae 2000 - Domain Bacteria - Domain Bacteria Woese et al. 1990 1 Genus †Eoleptonema Schopf 1983, incertae sedis 2 Genus †Primaevifilum Schopf 1983, incertae sedis 3 Genus †Archaeotrichion Schopf 1968, incertae sedis 4 Genus †Siphonophycus Schopf 1968, incertae sedis 5 Genus Bactoderma Tepper and Korshunova 1973 (Approved Lists 1980), incertae sedis 6 Genus Stibiobacter Lyalikova 1974 (Approved Lists 1980), incertae sedis 7.1.1.1.1.1 Superphylum "Proteobacteria" Craig et al. 2010 1.1 Phylum "Alphaproteobacteria" 1.2.1 Phylum "Acidithiobacillia" 1.2.2.1 Phylum "Gammaproteobacteria" 1.2.2.2.1 Candidate phylum Muproteobacteria (RIF23) Anantharaman et al. 2016 1.2.2.2.2 Phylum "Betaproteobacteria" 2 Phylum "Zetaproteobacteria" 7.1.1.1.1.2 Phylum "Deltaproteobacteria_1" 7.1.1.1.2.1.1.1 Phylum "Deltaproteobacteria" [polyphyletic] 7.1.1.1.2.1.1.2.1 Phylum "Deltaproteobacteria_2" 7.1.1.1.2.1.1.2.2 Phylum "Deltaproteobacteria_3" 7.1.1.1.2.1.2 Candidate phylum Dadabacteria (CSP1-2) Hug et al. 2015 7.1.1.1.2.2.1 Candidate phylum "MBNT15" 7.1.1.1.2.2.2 Candidate phylum "Uncultured Bacterial Phylum 10 (UBP10)" Parks et al. 2017 7.1.1.2.1 Phylum "Nitrospirae_1" 7.1.1.2.2 Phylum Chrysiogenetes Garrity and Holt 2001 7.1.2.1.1 Phylum "Nitrospirae" Garrity and Holt 2001 [polyphyletic] 7.1.2.1.2.1.1 Candidate phylum Rokubacteria (CSP1-6) Hug et al. 2015 7.1.2.1.2.1.2 Candidate phylum "NC10" 7.1.2.1.2.2.1 Candidate phylum Modulibacteria (KSB3) Sekiguchi et al. 2015 7.1.2.1.2.2.2 Candidate phylum Tectomicrobia Wilson et al. 2014 7.1.2.2.1 Candidate phylum Schekmanbacteria (RIF3) Anantharaman et al. 2016 7.1.2.2.2.1 Candidatus Entotheonella Schmidt et al. 2000 7.1.2.2.2.2 Phylum "Nitrospinae" Lücker et al. 2013 7.2.1 Phylum Acidobacteria Thrash and Coates 2012 7.2.2.1 Candidate phylum Aminicenantes (OP8) Rinke et al. 2013 7.2.2.2 Candidate phylum Fischerbacteria (RIF25) Anantharaman et al. 2016 8.1.1.1 Superphylum Fibrobacteres-Chlorobi-Bacteroidetes (FCB) Gupta 2004 1.1.1.1.1.1.1 Phylum Bacteroidetes Krieg et al. 2012 1.1.1.1.1.1.2 Phylum Chlorobi Iino et al. 2010 1.1.1.1.1.2 Phylum Ignavibacteriae Podosokorskaya et al. 2013 1.1.1.1.2.1 Phylum "Calditrichaeota" Kublanov et al. 2017 1.1.1.1.2.2 Candidate phylum "KSB1" 1.1.1.2.1 Candidate phylum Marinimicrobia (SAR406 / Marine Group A) Rinke et al. 2013 1.1.1.2.2 Candidate phylum "Uncultured Bacterial Phylum 11 (UBP11)" Parks et al. 2017 1.1.2.1.1 Candidate phylum Edwardsbacteria (RIF29) Anantharaman et al. 2016 1.1.2.1.2.1 Candidate phylum Raymondbacteria (RIF7) Anantharaman et al. 2016 1.1.2.1.2.2 Phylum Fibrobacteres Garrity and Holt 2012 1.1.2.2.1.1 Phylum Gemmatimonadetes Zhang et al. 2003 1.1.2.2.1.2 Candidate phylum Glassbacteria (RIF5) Anantharaman et al. 2016 1.1.2.2.2 Candidate phylum Latescibacteria (WS3) Rinke et al. 2013 1.2.1.1 Candidate phylum Zixibacteria (RBG-1) Castelle et al. 2013 1.2.1.2 Candidate phylum "Uncultured Bacterial Phylum 14 (UBP14)" Parks et al. 2017 1.2.1.3.1 Candidate phylum Handelsmanbacteria (RIF27) Anantharaman et al. 2016 1.2.1.3.2.1 Candidate phylum "TA06" 1.2.1.3.2.2 Candidate phylum Eisenbacteria (RIF28) Anantharaman et al. 2016 1.2.2.1 Candidate phylum "Uncultured Bacterial Phylum 1 (UBP1)" Parks et al. 2017 1.2.2.2 Candidate phylum "Uncultured Bacterial Phylum 2 (UBP2)" Parks et al. 2017 2.1.1 Candidate phylum Cloacimonetes (WWE1) Rinke et al. 2013 2.1.2 Candidate phylum Delongbacteria (RIF26) Anantharaman et al. 2016 2.2.1 Candidate phylum Fermentibacteria (Hyd24-12) Kirkegaard et al. 2016 2.2.2.1 Candidate phylum Hydrothermae (EM3) Jungbluth et al. 2017 2.2.2.2 Candidate phylum "WOR-3" 8.1.1.2.1 Superphylum Planctomycetes-Verrucomicrobia-Chlamydiae (PVC) Wagner and Horn 2006 1.1.1.1 Phylum Verrucomicrobia Hedlund 2011 1.1.1.2 Phylum Lentisphaerae Cho et al. 2004 1.1.2 Phylum Chlamydiae Garrity and Holt 2012 1.2 Candidate phylum "Uncultured Bacterial Phylum 17 (UBP17)" Parks et al. 2017 2 Phylum "Planctomycetes" Garrity and Holt 2001 8.1.1.2.2 Candidate phylum Hydrogenedentes (NKB19) Rinke et al. 2013 8.1.2.1.1.1.1 Phylum Elusimicrobia Geissinger et al. 2010 8.1.2.1.1.1.2 Candidate phylum Firestonebacteria (RIF1) Anantharaman et al. 2016 8.1.2.1.1.1.3 Candidate phylum Desantisbacteria Probst et al. 2017 8.1.2.1.1.2.1 Candidate phylum Aerophobetes (CD12 / BHI80-139) Rinke et al. 2013 8.1.2.1.1.2.2 Candidate phylum "Uncultured Bacterial Phylum 5 (UBP5)" Parks et al. 2017 - 1 - © Universal Taxonomic Services, Zwaag, The Netherlands Systema Naturae 2000 - Domain Bacteria - 8.1.2.1.2.1.1 Candidate phylum Omnitrophica (OP3) Rinke et al. 2013 8.1.2.1.2.1.2 Candidate phylum "Uncultured Bacterial Phylum 3 (UBP3)" Parks et al. 2017 8.1.2.1.2.2 Candidate phylum "Uncultured Bacterial Phylum 4 (UBP4)" Parks et al. 2017 8.1.2.2.1 Candidate phylum Poribacteria Fieseler et al. 2004 8.1.2.2.2 Candidate phylum "BRC1" 8.2.1.1.1 Superphylum Terrabacteria Battistuzzi et al. 2004 1.1.1 Phylum Firmicutes corrig. Gibbons and Murray 1978 (Approved Lists 1980) 1.1.2.1 Phylum Armatimonadetes Tamaki et al. 2011 1.1.2.2 Candidate phylum "Uncultured Bacterial Phylum 13 (UBP13)" Parks et al. 2017 1.2.1.1 Phylum "Actinobacteria" Garrity and Holt 2001 1.2.1.2 Phylum "Deinococcus-Thermus" 1.2.2.1 Phylum Chloroflexi Garrity and Holt 2001 1.2.2.2.1 Candidate phylum "Uncultured Bacterial Phylum 9 (UBP9/SHA-109)" Parks et al. 2017 1.2.2.2.2 Candidate phylum "Uncultured Bacterial Phylum 12 (UBP12)" Parks et al. 2017 2.1 Candidate phylum Coatesbacteria (RIF8) Anantharaman et al. 2016 2.2.1.1 Phylum Cyanobacteria (ex Stanier 1974) Cavalier-Smith 2002 - cyanobacteria 2.2.1.2 Candidate phylum Melainabacteria (ACD20) Wrighton et al. 2014 2.2.2.1 Candidate phylum "RBX1" 2.2.2.2 Candidate phylum "WOR1" 2.2.2.3 Candidate phylum Margulisbacteria (RIF30) Anantharaman et al. 2016 8.2.1.1.2.1.1.1 Phylum Thermotogae Reysenbach 2001 8.2.1.1.2.1.1.2 Candidate phylum Acetothermia (OP1) Rinke et al. 2013 8.2.1.1.2.1.2.1 Candidate phylum Fervidibacteria (Oct-Spa1-106) Rinke et al. 2013 8.2.1.1.2.1.2.2.1.1 Phylum Caldiserica Mori et al. 2009 8.2.1.1.2.1.2.2.1.2 Phylum "Coprothermobacteraeota" Parks et al. 2017 8.2.1.1.2.1.2.2.2 Phylum Dictyoglomi Patel 2012 8.2.1.1.2.2.1 Phylum Synergistetes Jumas-Bilak et al. 2009 8.2.1.1.2.2.2 Candidate phylum Atribacteria (OP9) Rinke et al. 2013 8.2.1.2.1 Candidate phylum "Uncultured Bacterial Phylum 16 (UBP16)" Parks et al. 2017 8.2.1.2.2 Candidate phylum "Uncultured Bacterial Phylum 15 (UBP15)" Parks et al. 2017 8.2.2.1.1.1.1 Candidate phylum Lambdaproteobacteria (RIF24) Anantharaman et al. 2016 8.2.2.1.1.1.2 Phylum "Epsilonproteobacteria" 8.2.2.1.1.2 Phylum Deferribacteres Garrity and Holt 2001 8.2.2.1.2.1.1.1.1 Phylum Aquificae Reysenbach 2001 8.2.2.1.2.1.1.1.2 Candidate phylum Calescamantes (EM19) Rinke et al. 2013 8.2.2.1.2.1.1.2 Candidate phylum Fraserbacteria (RIF31) Anantharaman et al. 2016 8.2.2.1.2.1.2.1 Phylum Fusobacteria Garrity and Holt 2012 8.2.2.1.2.1.2.2 Candidate phylum "Uncultured Bacterial Phylum 6 (UBP6)" Parks et al. 2017 8.2.2.1.2.2.1 Candidate phylum Riflebacteria (RIF32) Anantharaman et al. 2016 8.2.2.1.2.2.2 Candidate phylum Wallbacteria (RIF33) Anantharaman et al. 2016 8.2.2.2.1 Phylum "Spirochaetes" Garrity and Holt 2001 8.2.2.2.2.1.1 Candidate phylum Lindowbacteria (RIF2) Anantharaman et al. 2016 8.2.2.2.2.1.2 Phylum "Dependentiae (TM6)" Yeoh et al. 2016 8.2.2.2.2.1.3 Candidate phylum "Uncultured Bacterial Phylum 8 (UBP8)" Parks et al. 2017 8.2.2.2.2.2.1 Candidate phylum "Uncultured Bacterial Phylum 7 (UBP7)" Parks et al. 2017 8.2.2.2.2.2.2.1 "Candidate Phyla Radiation (CPR)" Brown et al. 2015 1.1 Candidate phylum Dojkabacteria (WS6) Wrighton et al. 2016 1.2.1.1.1 Candidate phylum "CPR3" Brown et al. 2015 1.2.1.1.2 Candidate phylum Woykebacteria (RIF34) Anantharaman et al. 2016 1.2.1.2.1 Candidate phylum "CPR1" Brown et al. 2015 1.2.1.2.2 Candidate superphylum Microgenomates (OP11) Brown et al. 2015 1.1 Candidate phylum Daviesbacteria Brown et al. 2015 1.2 Candidate phylum Curtissbacteria Brown et al. 2015 2.1.1.1 Candidate phylum Shapirobacteria Brown et al. 2015 2.1.1.2.1 Candidate phylum Amesbacteria Brown et al. 2015 2.1.1.2.2.1 Candidate phylum Blackburnbacteria (RIF35) Anantharaman et al.