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A Revised Classification of Naked Lobose Amoebae (Amoebozoa
Protist, Vol. 162, 545–570, October 2011 http://www.elsevier.de/protis Published online date 28 July 2011 PROTIST NEWS A Revised Classification of Naked Lobose Amoebae (Amoebozoa: Lobosa) Introduction together constitute the amoebozoan subphy- lum Lobosa, which never have cilia or flagella, Molecular evidence and an associated reevaluation whereas Variosea (as here revised) together with of morphology have recently considerably revised Mycetozoa and Archamoebea are now grouped our views on relationships among the higher-level as the subphylum Conosa, whose constituent groups of amoebae. First of all, establishing the lineages either have cilia or flagella or have lost phylum Amoebozoa grouped all lobose amoe- them secondarily (Cavalier-Smith 1998, 2009). boid protists, whether naked or testate, aerobic Figure 1 is a schematic tree showing amoebozoan or anaerobic, with the Mycetozoa and Archamoe- relationships deduced from both morphology and bea (Cavalier-Smith 1998), and separated them DNA sequences. from both the heterolobosean amoebae (Page and The first attempt to construct a congruent molec- Blanton 1985), now belonging in the phylum Per- ular and morphological system of Amoebozoa by colozoa - Cavalier-Smith and Nikolaev (2008), and Cavalier-Smith et al. (2004) was limited by the the filose amoebae that belong in other phyla lack of molecular data for many amoeboid taxa, (notably Cercozoa: Bass et al. 2009a; Howe et al. which were therefore classified solely on morpho- 2011). logical evidence. Smirnov et al. (2005) suggested The phylum Amoebozoa consists of naked and another system for naked lobose amoebae only; testate lobose amoebae (e.g. Amoeba, Vannella, this left taxa with no molecular data incertae sedis, Hartmannella, Acanthamoeba, Arcella, Difflugia), which limited its utility. -
S41598-020-68694-9.Pdf
www.nature.com/scientificreports OPEN Delayed cytokinesis generates multinuclearity and potential advantages in the amoeba Acanthamoeba castellanii Nef strain Théo Quinet1, Ascel Samba‑Louaka2, Yann Héchard2, Karine Van Doninck1 & Charles Van der Henst1,3,4,5* Multinuclearity is a widespread phenomenon across the living world, yet how it is achieved, and the potential related advantages, are not systematically understood. In this study, we investigate multinuclearity in amoebae. We observe that non‑adherent amoebae are giant multinucleate cells compared to adherent ones. The cells solve their multinuclearity by a stretchy cytokinesis process with cytosolic bridge formation when adherence resumes. After initial adhesion to a new substrate, the progeny of the multinucleate cells is more numerous than the sibling cells generated from uninucleate amoebae. Hence, multinucleate amoebae show an advantage for population growth when the number of cells is quantifed over time. Multiple nuclei per cell are observed in diferent amoeba species, and the lack of adhesion induces multinuclearity in diverse protists such as Acanthamoeba castellanii, Vermamoeba vermiformis, Naegleria gruberi and Hartmannella rhysodes. In this study, we observe that agitation induces a cytokinesis delay, which promotes multinuclearity. Hence, we propose the hypothesis that multinuclearity represents a physiological adaptation under non‑adherent conditions that can lead to biologically relevant advantages. Te canonical view of eukaryotic cells is usually illustrated by an uninucleate organization. However, in the liv- ing world, cells harbouring multiple nuclei are common. Tis multinuclearity can have diferent origins, being either generated (i) by fusion events between uninucleate cells or by (ii) uninucleate cells that replicate their DNA content without cytokinesis. -
Nuclear and Genome Dynamics in Multinucleate Ascomycete Fungi
Current Biology 21, R786–R793, September 27, 2011 ª2011 Elsevier Ltd All rights reserved DOI 10.1016/j.cub.2011.06.042 Nuclear and Genome Dynamics Review in Multinucleate Ascomycete Fungi Marcus Roper1,2, Chris Ellison3, John W. Taylor3, to enhance phenotypic plasticity [5] and is also thought to and N. Louise Glass3,* contribute to fungal virulence [6–8]. Recent and ongoing work reveals two fundamental chal- lenges of multinucleate fungal lifestyles, both in the presence Genetic variation between individuals is essential to evolu- and absence of genotypic diversity — namely, the coordina- tion and adaptation. However, intra-organismic genetic tion of populations of nuclei for growth and other behaviors, variation also shapes the life histories of many organisms, and the suppression of nucleotypic competition during including filamentous fungi. A single fungal syncytium can reproduction and dispersal. The potential for a mycelium to harbor thousands or millions of mobile and potentially harbor fluctuating proportions and distributions of multiple genotypically different nuclei, each having the capacity genotypes led some 20th century mycologists to argue for to regenerate a new organism. Because the dispersal of life-history models that focused on nuclei as the unit of asexual or sexual spores propagates individual nuclei in selection, and on the role of nuclear cooperation and compe- many of these species, selection acting at the level of tition in shaping mycelium growth and behavior [9,10].In nuclei creates the potential for competitive and coopera- particular, nuclear totipotency creates potential for conflict tive genome dynamics. Recent work in Neurospora crassa between heterogeneous nuclear populations within a myce- and Sclerotinia sclerotiorum has illuminated how nuclear lium [11,12]. -
Unicellular Associative Conditioning: an Interspecies Analysis
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.19.346007; this version posted October 21, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Unicellular associative conditioning: an interspecies analysis Jose Carrasco-Pujante1,2*, Carlos Bringas2*, Iker Malaina3, Maria Fedetz4, Luis Martínez2,5, Gorka Pérez-Yarza2, María Dolores Boyano2, Mariia Berdieva6, Andrew Goodkov6, José I. López7, Shira Knafo1,8,9# & Ildefonso M. De la Fuente3,10# 1. Department of Physiology and Cell Biology, Faculty of Health Sciences, and The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel. 2. Department of Cell Biology and Histology, Faculty of Medicine and Nursing, University of the Basque Country, UPV/EHU, Leioa 48940, Spain. 3. Department of Mathematics, Faculty of Science and Technology, University of the Basque Country, UPV/EHU, Leioa 48940, Spain. 4. Department of Cell Biology and Immunology, Institute of Parasitology and Biomedicine “López-Neyra”, CSIC, Granada 18016, Spain. 5. Basque Center of Applied Mathematics (BCAM) Bilbao 48009, Spain. 6. Laboratory of Cytology of Unicellular Organisms, Institute of Cytology Russian Academy of Science St. Petersburg 194064, Russia. 7. Department of Pathology, Cruces University Hospital, Biocruces-Bizkaia Health Research Institute, Barakaldo 48903, Spain. 8. Biophysics Institute, CSIC-UPV/EHU, Campus, University of the Basque Country (UPV/EHU), Leioa 48940, Spain. 9. Ikerbasque, Basque Foundation for Science, Bilbao 48013, Spain. 10. Department of Nutrition, CEBAS-CSIC Institute, Espinardo University Campus, Murcia 30100, Spain. * Equal contribution # Corresponding Authors: Correspondence and requests for materials should be addressed to Shira Knafo or Ildefonso M. -
BIO 002: INVERTEBRATE BIOLOGY PHYLUM PROTOZOA PHYLUM PROTOZOA Protozoa Refers to Single-Celled Eukaryotic Organisms, Eith
BIO 002: INVERTEBRATE BIOLOGY PHYLUM PROTOZOA PHYLUM PROTOZOA Protozoa refers to single-celled eukaryotic organisms, either free-living or parasitic, which feed on organic matter such as other microorganisms or organic tissues and debris. The name protozoa means “first animals” and has been derived from two Greek words, PROTOS, meaning first and ZOON, meaning animal. They are looked upon as the most primitive form of life, appearing first in the evolutionary history. They range in size from 1 to 106 micrometers. Structurally a protozoan is a one-called animal comparable with one cell or a METAZOAN with a body consisting of only a mass of protoplasm. But functionally, it is an entire organisms, physiologically balanced and performs all the essential process of an animal, hence protozoans are called acellular or non-cellular organisms. Historically, the protozoa were regarded as "one-celled animals," because they often possess animal-like behaviors, such as motility and predation, and lack a cell wall, as found in plants and many algae. There are 30,000 to 40,000 known species of Protozoa. However, the actual number of species is probably much larger, since the organisms have not been thoroughly investigated owing to their microscopic size and to technical difficulties. Hundreds of new species are being discovered each year. Although the traditional practice of grouping protozoans with animals is no longer considered valid, the term continues to be used in a loose way to identify single-celled organisms that can move independently and feed by heterotrophy. Characteristics of Protozoa They move through the aid of Locomotry organs like hair-like Cilia e.g. -
Multinucleate Cell Angiohistiocytoma
To protect the rights of the author(s) and publisher we inform you that this PDF is an uncorrected proof for internal business use only by the author(s), editor(s), reviewer(s), Elsevier and typesetter Toppan Best-set. It is not allowed to publish this proof online or in print. This proof copy is the copyright property of the publisher and is confidential until formal publication. These proofs may contain color(colour) figures. Those figures may print black and white in the final printed book if a color(colour) print product has not been planned. The color(colour) figures will appear in color(colour) in all electronic versions of this book. s0060 MULTINUCLEATE CELL ANGIOHISTIOCYTOMA s0065 Definition • Fibroblast-like and histiocyte-like mononuclear cells u0390 p0300 • A distinctive benign dermal proliferation composed • Thickened collagen bundles, frequently hyalinized u0395 of thin-walled capillaries and veins, admixed with • Occasional inflammatory cells, predominantly u0400 scattered multinucleated cells lymphocytes • Hemorrhage absent, no hemosiderin deposition u0405 s0070 Clinical features • Decreased elastic fibers in the dermis can be observed u0410 s0075 Epidemiology • Overlying epidermis normal, but can also be u0415 p0310 • Female predominance (F:M = 3 : 1) hyperplastic u0275 • Middle-aged adult patients • Proliferation restricted to upper and middermis u0420 s0080 Presentation Immunopathology/special stains s0100 p0325 • Slowly growing single or multiple firm, red-brown to • Multinucleated cells display variable CD68 positivity -
Host-Parasite Relationships of Atalodera Spp. (Heteroderidae) M
234 Journal of Nematology, Volume 15, No. 2, April 1983 and D. I. Edwards. 1972. Interaction of Meloidogyne 18. Volterra, V. 1931. Variations and fluctuations naasi, Pratylenchus penetrans, and Tylenchorhyn- of the number of individuals in animal species chus agri on creeping bentgrass. J. Nematol. 4:~ living together. Pp. 409-448 tn R. N. Chapman ed. 162-165. Animal ecology. New York: McGraw-Hill. Host-Parasite Relationships of Atalodera spp. (Heteroderidae) M. ]~'IUNDO-OCAMPOand J. G. BALDWIN r Abstract: Atalodera ucri, Wouts and Sher, 1971, and ,4. lonicerae, (Wonts, 1973) Luc et al., 1978, induce similar multinucleate syncytia in roots of golden bush and honeysuckle, respec- tively. The syncytium is initiated in the cortex; as it expands, it includes several partially delimited syncytial units and distorts vascular tissue. Outer walls of the syncytium are rela- tively smooth and thickest near the feeding site of the nematode; inner walls are interrupted by perforations which enlarge as syncytial units increa~ in size. The cytoplasm of the syncytium is granular and includes numermts plastids, mit(~chondria, vacuoles, Golgi, and a complex network of membranes. Nuclei are greatly enlarged and amoeboid in shape. Although more than one nucleus sometimes occur in a given syncytial unit, no mitotic activity was observed. Syncytia induced by species of Atalodera chiefly differ from those of Heterodera sensu lato by the absence of cell wall ingrowths; wall ingrowths increase solute transport and characterize transfer cells. In syncytia of Atalodera spp., a high incidence of pits and pit fields in walls adjacent to vasctdar elements suggests that in this case plasmodesmata provide the pathway for increased entry of sohttes. -
Physarum Polycephalum (Plasmodial Slime Mold)
Physarum polycephalum (plasmodial slime mold) Species: polycephalum Genus: Physarum Family: Physaraceae Order: Physarales Class: Myxomycetes Phylum: Mycetozoa Kingdom: Amoebozoa Conditions for Customer Ownership We hold permits allowing us to transport these organisms. To access permit conditions, click here. Never purchase living specimens without having a disposition strategy in place. There are currently no USDA permits required for this organism. In order to protect our environment, never release a live laboratory organism into the wild. Primary Hazard Considerations Always wash your hands thoroughly before and after you handle your cultures, or anything it has touched. It is recommended to use gloves when working with mold, fungus, or bacteria. Availability Physarum is available year round. Care Habitat • Plasmodial stage are shipped in a Petri dish on Physarum agar with oats. Your Physarum should be bright yellow in color, and fan shaped. If your Physarum takes on a different appearance it may be contaminated. Contaminated cultures occur when a foreign specimen (something other than Physarum) makes its way onto your culture. This culture should be stored at room temperature in a dark place. The culture should be viable for about 1–2 weeks in its current container. • Sclerotia are hardened masses of irregular form consisting of many minute cell-like components. These are shipped on cut strips of filter paper in a tube. The culture should be stored at room temperature and can be stored in this stage for several months. Care: • Physarum is subcultured onto Physarum agar, and is incubated at room temperature or 25 °C. To maintain viability, plasmodial Physarum should be subcultured weekly. -
Cytoskeleton and Cell Motility
Cytoskeleton and Cell Motility 1. (28 pts) Amoeba proteus, a single-celled eukaryote, moves by means of psudopods attaching to and detaching from the substratum. Locomotion seems to be correlated with the forward flow of fluid cytoplasm (endoplasm) into an advancing pseudopod through a surrounding, gel-like ectoplasmic tube. The ectoplasm forms at the pseudopodial tip in a region called the Fountain Zone. As the amoeba advances the ectoplasmic tube “liquifies” at the posterior end to form endoplasm. These features are illustrated in the figure below. Both locomotion and cytoplasmic streaming are inhibited by cytochalasin B. Consider everything you’ve learned so far and answer all the following questions. A. (4 pts) When amoeba undergoes cell division, it stops streaming and rounds up into a spherical cell. Describe how this change in shape and behavior comes about and why it might be a necessary precondition for division. B. (6 pts) Briefly describe how cytoplasmic streaming is most likely organized and generated at the cellular and molecular levels. C. (5 pts) Briefly describe an additional experiment or observation that would test your hypothesis and indicate clearly what the results would show. CCM - 1 Cytoskeleton and Cell Motility D. (8 pts) Describe clearly, with the aid of a well-labeled diagram, how streaming within a pseudopod could result in movement of the amoeba across the substratum. E. (5 pts) Describe how your streaming mechanism might be regulated such that the amoeba might change its streaming pattern to form phagocytic pseudopods around a ciliate it had touched. Now evaluate some past answers to these questions, in light of your own essays. -
Protistology Collection of the Proteus-Type Amoebae at The
Protistology 9 (2), 99–111 (2015) Protistology Collection of the proteus-type amoebae at the Institute of Cytology, Russian Academy of Sciences. II. Index of strains and list of publications Andrew Goodkov, Alexander Yudin and Yuliya Podlipaeva Institute of Cytology, Russian Academy of Sciences, St. Petersburg, Russia Summary Previously, in the first part of publication (Goodkov et al., 2014) we had presented and described the collection of free living freshwater amoeba strains of Amoeba proteus-type (family Amoebidae), the collection being for a long time maintained in the Institute of Cytology RAS, Saint-Petersburg, Russia. This collection is named Amoebae Culture Collection at the Institute of Cytology (ACCIC). In the second part of collection description (the present publication) we quote the full list of amoebae strains maintaining today in the Collection with their passports containing the date of the strain acceptance, whom it was received from, when and where the strain was isolated from, notes, and the full register of articles where these strains were used as research objects (bibliography). Key words: Amoeba, bibliography, free living freshwater amoebae, strains collection Introduction with their passports which include the date of the strain acceptance, whom it was received from, when Today the Amoebae Culture Collection at the and where the strain was isolated from, notes, and Institute of Cytology RAS in St. Petersburg, Russia the full register of articles where these strains were (ACCIC) is the unique collection containing used as research objects (bibliography), with the numerous strains (=clones) of free living fresh- exception of secondary importance publications, water amoebae of Amoeba proteus-type (family such as abstracts, etc. -
The Role of Endoplasmic Reticulum in the Repair of Amoeba Nuclear Envelopes Damaged Microsurgically
J. Cell Sci. 14, 421-437 ('974) 421 Printed in Great Britain THE ROLE OF ENDOPLASMIC RETICULUM IN THE REPAIR OF AMOEBA NUCLEAR ENVELOPES DAMAGED MICROSURGICALLY C. J. FLICKINGER Department of Anatomy, School of Medicine, University of Virginia, CharlottesvilU, Virginia 22901, U.S.A. SUMMARY The nuclear envelopes of amoebae were damaged microsurgically, and the fate of the lesions was studied with the electron microscope. Amoebae were placed on the surface of an agar- coated slide. Using a glass probe, the nucleus was pushed from an amoeba, damaged with a chopping motion of the probe, and reinserted into the amoeba. Cells were prepared for electron microscopy at intervals of between 10 min and 4 days after the manipulation. Nuclear envelopes studied between 10 min and 1 h after the injury displayed extensive damage, includ- ing numerous holes in the nuclear membranes. Beginning 15 min after the manipulation, pieces of rough endoplasmic reticulum intruded into the holes in the nuclear membranes. These pieces of rough endoplasmic reticulum subsequently appeared to become connected to the nuclear membranes at the margins of the holes. By 1 day following the injury, many cells had died, but the nuclear membranes were intact in those cells that survived. The elaborate fibrous lamina or honeycomb layer characteristic of the amoeba nuclear envelope was resistant to early changes after the manipulation. Patches of disorganization of the fibrous lamina were present 5 h to 1 day after injury, but the altered parts showed evidence of progress toward a return to normal configuration by 4 days after the injury. It is proposed that the rough endoplasmic reticulum participates in the repair of injury to the nuclear membranes. -
Slime Molds on Home Lawns
LAWN & GARDEN Slime Molds on Home Lawns ► Slime molds rarely damage lawns, but their appearance is unsightly to homeowners. Learn the symptoms, cause, and control. Slime molds commonly occur on all warm- and cool- season turfgrasses across Alabama. Most slime mold causing fungi on turfgrasses belong to the genera of Physarum, Fuligo, and Mucilago. Slime molds are saprophytic fungal-like organisms that obtain their nutrients from dead or decaying organic matter in soil or thatch. Slime molds are most prevalent following prolonged periods of leaf wetness, which favors growth. Slime molds use living turfgrass strictly for structural support and rarely cause damage to lawns. However, the sudden appearance of the crusty, gray to black fruiting bodies of a slime mold on the leaves of a manicured lawn often causes homeowners a great deal of anxiety. At times, homeowners mistake slime mold appearance with chemical spills and become concerned about the health of their lawns. Alabama’s humid, warm climate is quite conducive to slime mold activity, particularly during extended periods of rain in late spring and summer. Areas with poor drainage and Figure 2. Slime mold pustules on residential turf. heavy thatch (dead turfgrass tissue lying between the green vegetation of the grass above and the root system below) also favor slime mold growth. Slime molds may Symptoms appear in the same area of a lawn from year to year. Various species of slime molds can result in the growth of many small, round pustules called sporangia (fruiting bodies) on turfgrass leaves in small circular to irregular patches, usually 4 to 8 inches in diameter (figure 1).