In Search of a Physiological Role for Amine Oxidase,Copper Containing-3 (AOC3) in Adipocytes
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Zinc-Α2-Glycoprotein Is an Inhibitor of Amine Oxidase
1 Supplemental Fig. 1 and 2 of “ZINC-α2-GLYCOPROTEIN IS AN INHIBITOR OF AMINE 2 OXIDASE COPPER-CONTAINING 3”, Matthias Romauch 3 Plasma enhances AOC3 activity 4 Endogenous plasma amine oxidase activity has previously been described in both human and 5 mouse plasma [1–3]. This activity derives from membrane-bound AOC3 which has been 6 released by metalloprotease activity [4]. A pronounced increase in levels of cleaved AOC3 is 7 observed during diabetes, congestive heart failure and liver cirrhosis [5–7]. Incubating 8 recombinant AOC3 with IEX fractions lacking ZAG (Fig. 4, B) increased amine oxidase 9 activity, which might be due to plasma-derived AOC3 activity or other plasma components. 10 To test this hypothesis, the amine oxidase activity in plasma of wt, AOC3 k.o. and ZAG k.o. 11 mice was measured directly using radioactive benzylamine as substrate. The activity linearly 12 increased with measured plasma volume of wt and ZAG k.o. mice, and the activity could be 13 blocked by the highly selective AOC3 inhibitor LJP1586 (Supplemental Fig. 1, A and B). 14 However, AOC3 activity in AOC3 k.o. plasma does not increase with increasing plasma 15 volume and residual activity cannot be further significantly reduced by adding LJP1586 16 (Supplemental Fig. 1, C). This suggests that AOC3 is the main plasma enzyme responsible for 17 benzylamine deamination, but it does not exclude other amine oxidases that are not sensitive 18 to LJP1586 or that have a higher affinity for other substrates. One such category of enzymes 19 could be the lysyl oxidases, which are also members of the copper amine oxidase family. -
Topical LOX Inhibitor 2 Compounds Phase 2 Ready in 2020
Investor Presentation Gary Phillips CEO 26 July 2019 For personal use only 1 Forward looking statement This document contains forward-looking statements, including statements concerning Pharmaxis’ future financial position, plans, and the potential of its products and product candidates, which are based on information and assumptions available to Pharmaxis as of the date of this document. Actual results, performance or achievements could be significantly different from those expressed in, or implied by, these forward-looking statements. All statements, other than statements of historical facts, are forward-looking statements. These forward-looking statements are not guarantees or predictions of future results, levels of performance, and involve known and unknown risks, uncertainties and other factors, many of which are beyond our control, and which may cause actual results to differ materially from those expressed in the statements contained in this document. For example, despite our efforts there is no certainty that we will be successful in partnering our LOXL2 program or any of the other products in our pipeline on commercially acceptable terms, in a timely fashion or at all. Except as required by law we undertake no obligation to update these forward-looking statements as a result of new information, future events or otherwise. For personal use only 2 A business model generating a valuable pipeline in fibrotic and inflammatory diseases • Anti fibrosis / oncology drug successfully cleared initial Clinical phase 1 study trials in high -
Increased Vascular Adhesion Protein 1 (VAP-1) Levels Are Associated with Alternative M2 Macrophage Activation and Poor Prognosis for Human Gliomas
diagnostics Article Increased Vascular Adhesion Protein 1 (VAP-1) Levels Are Associated with Alternative M2 Macrophage Activation and Poor Prognosis for Human Gliomas Shu-Jyuan Chang 1 , Hung-Pin Tu 2, Yen-Chang Clark Lai 3, Chi-Wen Luo 4,5, Takahide Nejo 6, 6 3,7,8, , 9,10, , Shota Tanaka , Chee-Yin Chai * y and Aij-Lie Kwan * y 1 Graduate Institute of Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 80708, Taiwan; [email protected] 2 Department of Public Health and Environmental Medicine, School of Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 80708, Taiwan; [email protected] 3 Department of Pathology, Kaohsiung Medical University Chung Ho Memorial Hospital, Kaohsiung 80756, Taiwan; [email protected] 4 Division of Breast Surgery, Department of Surgery, Kaohsiung Medical University Chung Ho Memorial Hospital, Kaohsiung 80756, Taiwan; [email protected] 5 Department of Surgery, Kaohsiung Medical University Chung Ho Memorial Hospital, Kaohsiung 80756, Taiwan 6 Department of Neurosurgery, Graduate School of Medicine, University of Tokyo, Tokyo 113-0033, Japan; [email protected] (T.N.); [email protected] (S.T.) 7 Department of Pathology, College of Medicine, Kaohsiung Medical University, Kaohsiung 80708, Taiwan 8 Institute of Biomedical Sciences, National Sun Yat-Sen University, Kaohsiung 80424, Taiwan 9 Department of Neurosurgery, Kaohsiung Medical University Chung Ho Memorial Hospital, Kaohsiung 80756, Taiwan 10 Department of Surgery, Faculty of Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 80708, Taiwan * Correspondence: [email protected] (C.-Y.C.); [email protected] (A.-L.K.); Tel.: +88-6-7312-1101 (ext. -
S41598-021-90243-1.Pdf
www.nature.com/scientificreports OPEN Metabolomics and computational analysis of the role of monoamine oxidase activity in delirium and SARS‑COV‑2 infection Miroslava Cuperlovic‑Culf1,2*, Emma L. Cunningham3, Hossen Teimoorinia4, Anuradha Surendra1, Xiaobei Pan5, Stefany A. L. Bennett2,6, Mijin Jung5, Bernadette McGuiness3, Anthony Peter Passmore3, David Beverland7 & Brian D. Green5* Delirium is an acute change in attention and cognition occurring in ~ 65% of severe SARS‑CoV‑2 cases. It is also common following surgery and an indicator of brain vulnerability and risk for the development of dementia. In this work we analyzed the underlying role of metabolism in delirium‑ susceptibility in the postoperative setting using metabolomic profling of cerebrospinal fuid and blood taken from the same patients prior to planned orthopaedic surgery. Distance correlation analysis and Random Forest (RF) feature selection were used to determine changes in metabolic networks. We found signifcant concentration diferences in several amino acids, acylcarnitines and polyamines linking delirium‑prone patients to known factors in Alzheimer’s disease such as monoamine oxidase B (MAOB) protein. Subsequent computational structural comparison between MAOB and angiotensin converting enzyme 2 as well as protein–protein docking analysis showed that there potentially is strong binding of SARS‑CoV‑2 spike protein to MAOB. The possibility that SARS‑CoV‑2 infuences MAOB activity leading to the observed neurological and platelet‑based complications of SARS‑CoV‑2 infection requires further investigation. COVID-19 is an ongoing major global health emergency caused by severe acute respiratory syndrome coro- navirus SARS-CoV-2. Patients admitted to hospital with COVID-19 show a range of features including fever, anosmia, acute respiratory failure, kidney failure and gastrointestinal issues and the death rate of infected patients is estimated at 2.2%1. -
The Role of Protein Crystallography in Defining the Mechanisms of Biogenesis and Catalysis in Copper Amine Oxidase
Int. J. Mol. Sci. 2012, 13, 5375-5405; doi:10.3390/ijms13055375 OPEN ACCESS International Journal of Molecular Sciences ISSN 1422-0067 www.mdpi.com/journal/ijms Review The Role of Protein Crystallography in Defining the Mechanisms of Biogenesis and Catalysis in Copper Amine Oxidase Valerie J. Klema and Carrie M. Wilmot * Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, 321 Church St. SE, Minneapolis, MN 55455, USA; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-612-624-2406; Fax: +1-612-624-5121. Received: 6 April 2012; in revised form: 22 April 2012 / Accepted: 26 April 2012 / Published: 3 May 2012 Abstract: Copper amine oxidases (CAOs) are a ubiquitous group of enzymes that catalyze the conversion of primary amines to aldehydes coupled to the reduction of O2 to H2O2. These enzymes utilize a wide range of substrates from methylamine to polypeptides. Changes in CAO activity are correlated with a variety of human diseases, including diabetes mellitus, Alzheimer’s disease, and inflammatory disorders. CAOs contain a cofactor, 2,4,5-trihydroxyphenylalanine quinone (TPQ), that is required for catalytic activity and synthesized through the post-translational modification of a tyrosine residue within the CAO polypeptide. TPQ generation is a self-processing event only requiring the addition of oxygen and Cu(II) to the apoCAO. Thus, the CAO active site supports two very different reactions: TPQ synthesis, and the two electron oxidation of primary amines. Crystal structures are available from bacterial through to human sources, and have given insight into substrate preference, stereospecificity, and structural changes during biogenesis and catalysis. -
Effects of an Anti-Inflammatory VAP-1/SSAO Inhibitor, PXS-4728A
Schilter et al. Respiratory Research (2015) 16:42 DOI 10.1186/s12931-015-0200-z RESEARCH Open Access Effects of an anti-inflammatory VAP-1/SSAO inhibitor, PXS-4728A, on pulmonary neutrophil migration Heidi C Schilter1*†, Adam Collison2†, Remo C Russo3,4†, Jonathan S Foot1, Tin T Yow1, Angelica T Vieira4, Livia D Tavares4, Joerg Mattes2, Mauro M Teixeira4 and Wolfgang Jarolimek1,5 Abstract Background and purpose: The persistent influx of neutrophils into the lung and subsequent tissue damage are characteristics of COPD, cystic fibrosis and acute lung inflammation. VAP-1/SSAO is an endothelial bound adhesion molecule with amine oxidase activity that is reported to be involved in neutrophil egress from the microvasculature during inflammation. This study explored the role of VAP-1/SSAO in neutrophilic lung mediated diseases and examined the therapeutic potential of the selective inhibitor PXS-4728A. Methods: Mice treated with PXS-4728A underwent intra-vital microscopy visualization of the cremaster muscle upon CXCL1/KC stimulation. LPS inflammation, Klebsiella pneumoniae infection, cecal ligation and puncture as well as rhinovirus exacerbated asthma models were also assessed using PXS-4728A. Results: Selective VAP-1/SSAO inhibition by PXS-4728A diminished leukocyte rolling and adherence induced by CXCL1/KC. Inhibition of VAP-1/SSAO also dampened the migration of neutrophils to the lungs in response to LPS, Klebsiella pneumoniae lung infection and CLP induced sepsis; whilst still allowing for normal neutrophil defense function, resulting in increased survival. The functional effects of this inhibition were demonstrated in the RV exacerbated asthma model, with a reduction in cellular infiltrate correlating with a reduction in airways hyperractivity. -
A Multistep Bioinformatic Approach Detects Putative Regulatory
BMC Bioinformatics BioMed Central Research article Open Access A multistep bioinformatic approach detects putative regulatory elements in gene promoters Stefania Bortoluzzi1, Alessandro Coppe1, Andrea Bisognin1, Cinzia Pizzi2 and Gian Antonio Danieli*1 Address: 1Department of Biology, University of Padova – Via Bassi 58/B, 35131, Padova, Italy and 2Department of Information Engineering, University of Padova – Via Gradenigo 6/B, 35131, Padova, Italy Email: Stefania Bortoluzzi - [email protected]; Alessandro Coppe - [email protected]; Andrea Bisognin - [email protected]; Cinzia Pizzi - [email protected]; Gian Antonio Danieli* - [email protected] * Corresponding author Published: 18 May 2005 Received: 12 November 2004 Accepted: 18 May 2005 BMC Bioinformatics 2005, 6:121 doi:10.1186/1471-2105-6-121 This article is available from: http://www.biomedcentral.com/1471-2105/6/121 © 2005 Bortoluzzi et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: Searching for approximate patterns in large promoter sequences frequently produces an exceedingly high numbers of results. Our aim was to exploit biological knowledge for definition of a sheltered search space and of appropriate search parameters, in order to develop a method for identification of a tractable number of sequence motifs. Results: Novel software (COOP) was developed for extraction of sequence motifs, based on clustering of exact or approximate patterns according to the frequency of their overlapping occurrences. -
Human AOC3 ELISA Kit (ARG81991)
Product datasheet [email protected] ARG81991 Package: 96 wells Human AOC3 ELISA Kit Store at: 4°C Component Cat. No. Component Name Package Temp ARG81991-001 Antibody-coated 8 X 12 strips 4°C. Unused strips microplate should be sealed tightly in the air-tight pouch. ARG81991-002 Standard 2 X 50 ng/vial 4°C ARG81991-003 Standard/Sample 30 ml (Ready to use) 4°C diluent ARG81991-004 Antibody conjugate 1 vial (100 µl) 4°C concentrate (100X) ARG81991-005 Antibody diluent 12 ml (Ready to use) 4°C buffer ARG81991-006 HRP-Streptavidin 1 vial (100 µl) 4°C concentrate (100X) ARG81991-007 HRP-Streptavidin 12 ml (Ready to use) 4°C diluent buffer ARG81991-008 25X Wash buffer 20 ml 4°C ARG81991-009 TMB substrate 10 ml (Ready to use) 4°C (Protect from light) ARG81991-010 STOP solution 10 ml (Ready to use) 4°C ARG81991-011 Plate sealer 4 strips Room temperature Summary Product Description ARG81991 Human AOC3 ELISA Kit is an Enzyme Immunoassay kit for the quantification of Human AOC3 in serum, plasma (heparin, EDTA) and cell culture supernatants. Tested Reactivity Hu Tested Application ELISA Specificity There is no detectable cross-reactivity with other relevant proteins. Target Name AOC3 Conjugation HRP Conjugation Note Substrate: TMB and read at 450 nm. Sensitivity 0.39 ng/ml Sample Type Serum, plasma (heparin, EDTA) and cell culture supernatants. Standard Range 0.78 - 50 ng/ml Sample Volume 100 µl www.arigobio.com 1/3 Precision Intra-Assay CV: 5.8%; Inter-Assay CV: 6.6% Alternate Names HPAO; Semicarbazide-sensitive amine oxidase; VAP-1; Vascular adhesion protein 1; Copper amine oxidase; SSAO; Membrane primary amine oxidase; EC 1.4.3.21; VAP1 Application Instructions Assay Time ~ 5 hours Properties Form 96 well Storage instruction Store the kit at 2-8°C. -
Mechanism–Based Inhibitors for Copper Amine Oxidases
MECHANISM–BASED INHIBITORS FOR COPPER AMINE OXIDASES: SYNTHESIS, MECHANISM, AND ENZYMOLOGY By BO ZHONG Submitted in partial fulfillment of the requirements For the degree of Doctor of Philosophy Thesis Adviser: Dr. Lawrence M. Sayre, Dr Irene Lee Department of Chemistry CASE WESTERN RESERVE UNIVERSITY January, 2010 CASE WESTERN RESERVE UNIVERSITY SCHOOL OF GRADUATE STUDIES We hereby approve the thesis/dissertation of ______________________________________________________ candidate for the ________________________________degree *. (signed)_______________________________________________ (chair of the committee) ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ (date) _______________________ *We also certify that written approval has been obtained for any proprietary material contained therein. Table of Contents Table of Contents ............................................................................................................... I List of Tables .................................................................................................................... V List of Figures .................................................................................................................. VI List of Schemes ................................................................................................................ XI Acknowledgements -
Semicarbazide-Sensitive Amine Oxidase and Vascular Complications in Diabetes Mellitus
! " # $% &'((% ()*+,- .-. (,/'*,-.-, 0.1,'(, 00.1. 2332 Dissertation for the Degree of Doctor of Philosophy (Faculty of Medicine) in Medical Pharmacology presented at Uppsala University in 2002 ABSTRACT Nordquist, J. 2002. Semicarbazide-sensitive amine oxidase and vascular complications in diabetes mellitus. Biochemical and molecular aspects. Acta Universitatis Upsaliensis. Comprehensive summaries of Uppsala Dissertations from the Faculty of Medicine 1174. 51 pp. Uppsala ISBN 91-554-5375-9. Plasma activity of the enzyme semicarbazide-sensitive amine oxidase (SSAO; EC.1.4.3.6) has been reported to be high in disorders such as diabetes mellitus, chronic congestive heart failure and liver cirrhosis. Little is known of how the activity is regulated and, consequently, the cause for these findings is not well understood. Due to the early occurrence of increased enzyme activity in diabetes, in conjunction with the production of highly cytotoxic substances in SSAO-catalysed reactions, it has been speculated that there could be a causal relationship between high SSAO activity and vascular damage. Aminoacetone and methylamine are the best currently known endogenous substrates for human SSAO and the resulting aldehyde- products are methylglyoxal and formaldehyde, respectively. Both of these aldehydes have been shown to be implicated in the formation of advanced glycation end products (AGEs). This thesis is based on studies exploring the regulation of SSAO activity and its possible involvement in the development of vascular damage. The results further strengthen the connection between high SSAO activity and the occurrence of vascular damage, since type 2 diabetic patients with retinopathy were found to have higher plasma activities of SSAO and lower urinary concentrations of methylamine than patients with uncomplicated diabetes. -
Nº Ref Uniprot Proteína Péptidos Identificados Por MS/MS 1 P01024
Document downloaded from http://www.elsevier.es, day 26/09/2021. This copy is for personal use. Any transmission of this document by any media or format is strictly prohibited. Nº Ref Uniprot Proteína Péptidos identificados 1 P01024 CO3_HUMAN Complement C3 OS=Homo sapiens GN=C3 PE=1 SV=2 por 162MS/MS 2 P02751 FINC_HUMAN Fibronectin OS=Homo sapiens GN=FN1 PE=1 SV=4 131 3 P01023 A2MG_HUMAN Alpha-2-macroglobulin OS=Homo sapiens GN=A2M PE=1 SV=3 128 4 P0C0L4 CO4A_HUMAN Complement C4-A OS=Homo sapiens GN=C4A PE=1 SV=1 95 5 P04275 VWF_HUMAN von Willebrand factor OS=Homo sapiens GN=VWF PE=1 SV=4 81 6 P02675 FIBB_HUMAN Fibrinogen beta chain OS=Homo sapiens GN=FGB PE=1 SV=2 78 7 P01031 CO5_HUMAN Complement C5 OS=Homo sapiens GN=C5 PE=1 SV=4 66 8 P02768 ALBU_HUMAN Serum albumin OS=Homo sapiens GN=ALB PE=1 SV=2 66 9 P00450 CERU_HUMAN Ceruloplasmin OS=Homo sapiens GN=CP PE=1 SV=1 64 10 P02671 FIBA_HUMAN Fibrinogen alpha chain OS=Homo sapiens GN=FGA PE=1 SV=2 58 11 P08603 CFAH_HUMAN Complement factor H OS=Homo sapiens GN=CFH PE=1 SV=4 56 12 P02787 TRFE_HUMAN Serotransferrin OS=Homo sapiens GN=TF PE=1 SV=3 54 13 P00747 PLMN_HUMAN Plasminogen OS=Homo sapiens GN=PLG PE=1 SV=2 48 14 P02679 FIBG_HUMAN Fibrinogen gamma chain OS=Homo sapiens GN=FGG PE=1 SV=3 47 15 P01871 IGHM_HUMAN Ig mu chain C region OS=Homo sapiens GN=IGHM PE=1 SV=3 41 16 P04003 C4BPA_HUMAN C4b-binding protein alpha chain OS=Homo sapiens GN=C4BPA PE=1 SV=2 37 17 Q9Y6R7 FCGBP_HUMAN IgGFc-binding protein OS=Homo sapiens GN=FCGBP PE=1 SV=3 30 18 O43866 CD5L_HUMAN CD5 antigen-like OS=Homo -
Identification of Alternatively Spliced Mrna Variants Related to Cancers
Oncogene (2004) 23, 3013–3023 & 2004 Nature Publishing Group All rights reserved 0950-9232/04 $25.00 www.nature.com/onc Identification of alternatively spliced mRNA variants related to cancers by genome-wide ESTs alignment Lijian Hui1,6, Xin Zhang2,6, Xin Wu3, Zhixin Lin4, Qingkang Wang2, Yixue Li*,5, Gengxi Hu*,1 1State Key Laboratory of Molecular Biology, Institute of Biochemistry and Cell Biology, Room 400, Cell Building, Shanghai Institute of Biological Sciences, Chinese Academy of Sciences,Yueyang Road 320, Shanghai 200031, China; 2Institute of Microelectronics, Shanghai Jiaotong University, China; 3Liver Cancer Institute, Zhongshan Hospital, China; 4School of Life Science, Shanghai Jiaotong University, China; 5Bioinformation Center, Shanghai Insititutes for Biological Sciences, Chinese Academy of Sciences, Yueyang Road 319, Shanghai 200031, China Several databases have been published to predict alter- Introduction native splicing of mRNAs by analysing the exon linkage relationship by alignment of expressed sequence tags One of the remarkable revelations that the recent (ESTs) to the genome sequence; however, little effort has description and annotation of the human genome from been made to investigate the relationship between cancers the International Human Genome Sequencing Consor- and alternative splicing. We developed a program, tium andprivate company Celera Genomics has Alternative Splicing Assembler (ASA), to lookfor splicing brought us is the prediction that there are about variants of human gene transcripts by genome-wide ESTs 30 000–40 000 gene transcripts in human beings (Lander alignment. Using ASA, we constructed the biosino et al., 2001; Venter et al., 2001), although only 60% of alternative splicing database (BASD), which predicted these genes were consistent in different data sources splicing variants for reference sequences from the (Hogenesch et al., 2001).