Klinefelter Syndrome
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SNP-Based Non-Invasive Prenatal Testing Detects Sex Chromosome Aneuploidies with High Accuracy
DOI: 10.1002/pd.4159 NIPT SPECIAL ISSUE SNP-based non-invasive prenatal testing detects sex chromosome aneuploidies with high accuracy Carole Samango-Sprouse1,3*, Milena Banjevic2, Allison Ryan2, Styrmir Sigurjonsson2, Bernhard Zimmermann2, Matthew Hill2, Megan P. Hall2, Margaret Westemeyer2, Jennifer Saucier2, Zachary Demko2 and Matthew Rabinowitz2 1George Washington University School of Medicine and Health Sciences, Washington, D.C., USA 2Natera Inc., San Carlos, CA, USA 3Neurodevelopmental Diagnostic Center for Young Children, Davidsonville, MD, USA *Correspondence to: Carole Samango-Sprouse. E-mail: [email protected] ABSTRACT Objective This study aimed to develop a single-nucleotide polymorphism-based and informatics-based non-invasive prenatal test that detects sex chromosome aneuploidies early in pregnancy. Methods Sixteen aneuploid samples, including thirteen 45,X, two 47,XXY, and one 47,XYY, along with 185 euploid controls, were analyzed. Cell-free DNA was isolated from maternal plasma, amplified in a single multiplex polymerase chain reaction assay that targeted 19 488 polymorphic loci covering chromosomes 13, 18, 21, X, and Y, and sequenced. Sequencing results were analyzed using a Bayesian-based maximum likelihood statistical method to determine copy number of interrogated chromosomes, calculating sample-specific accuracies. Results Of the samples that passed a stringent quality control metric (93%), the algorithm correctly identified copy number at all five chromosomes in all but one of the 187 samples, for 934/935 correct calls as early as 9.4 weeks of gestation. We detected 45,X with 91.7% sensitivity (CI: 61.5–99.8%) and 100% specificity (CI: 97.9–100%), and 47,XXY and 47,XYY. The average calculated accuracy was 99.78%. -
Testosterone Replacement in 49,XXXXY Syndrome: Andrological, Metabolic and Neurological Aspects
R Mazzilli and others Testosterone replacement in ID: 15-0114; January 2016 49,XXXXY syndrome DOI: 10.1530/EDM-15-0114 Open Access Testosterone replacement in 49,XXXXY syndrome: andrological, metabolic and neurological aspects 1 1 1 1 2 Rossella Mazzilli , Michele Delfino , Jlenia Elia , Francesco Benedetti , Laura Alesi , Correspondence Luciana Chessa2 and Fernando Mazzilli1 should be addressed to R Mazzilli 1Andrology Unit 2Genetics Unit, Department of Clinical and Molecular Medicine, Sant’Andrea Hospital, Email University of Rome “Sapienza”, Via di Grottarossa 1035, 00189 Rome, Italy [email protected] Summary We report the case of a 19-year-old boy, presenting several congenital malformations (facial dysmorphisms, cardiac and musculoskeletal abnormalities), mental retardation, recurrent respiratory infections during growth and delayed puberty. Although previously hospitalised in other medical centres, only psychological support had been recommended for this patient. In our department, genetic, biochemical/hormonal and ultrasound examinations were undertaken. The karyotype was 49,XXXXY, a rare aneuploidy with an incidence of 1/85 000–100 000, characterised by the presence of three extra X chromosomes in phenotypically male subjects. The hormonal/biochemical profile showed hypergonadotropic hypogonad- ism, insulin resistance and vitamin D deficiency. The patient was then treated with testosterone replacement therapy. After 12 months of treatment, we observed the normalisation of testosterone levels. There was also an increase -
Klinefelter, Turner & Down Syndrome
Klinefelter, Turner & Down Syndrome A brief discussion of gamete forma2on, Mitosis and Meiosis: h7ps://www.youtube.com/watch?v=zGVBAHAsjJM Non-disjunction in Meiosis: • Nondisjunction "not coming apart" is the failure of a chromosome pair to separate properly during meiosis 1, or of two chromatids of a chromosome to separate properly during meiosis 2 or mitosis. • Can effect each pair. • Not a rare event. • As a result, one daughter cell has two chromosomes or two chromatids and the other has none • The result of this error is ANEUPLOIDY. 4 haploid gametes 2 gametes with diploid 2 gametes with haploid number of x and 2 lacking number of X chromosome, 1 x chromosome gamete with diploid number of X chromosome, and 1 gamete lacking X chromosome MEIOSIS MITOSIS Nondisjunc2on at meiosis 1 = All gametes will be abnormal Nondisjunc2on at meiosis 2 = Half of the gametes are normal (%50 normal and %50 abnormal) Down’s Syndrome • Karyotype: 47, XY, +21 Three copies of chromosome 21 (21 trisomy) • The incidence of trisomy 21 rises sharply with increasing maternal age (above 37), but Down syndrome can also be the result of nondisjunction of the father's chromosome 21 (%15 of cases) • A small proportion of cases is mosaic* and probably arise from a non-disjunction event in early zygotic division. *“Mosaicism, used to describe the presence of more than one type of cells in a person. For example, when a baby is born with Down syndrome, the doctor will take a blood sample to perform a chromosome study. Typically, 20 different cells are analyzed. -
NIPT Fact Sheet
Victorian Clinical Genetics Services Murdoch Childrens Research Institute The Royal Children's Hospital Flemington Road, Parkville VIC 3052 P (03) 8341 6201 W vcgs.org.au NIPT fact sheet High risk for XXY This fact sheet is for women and their partners who receive a high risk result for XXY from the perceptTM non-invasive prenatal test (NIPT) Possible explanations for this offered by Victorian Clinical Genetics Services (VCGS). This information high risk result: may not be applicable to test results reported by other NIPT service There is a high chance that the baby has XXY. providers. However, the only way to provide a definitive As part of the service offered by VCGS, women and couples have diagnosis is to have a diagnostic procedure the opportunity to discuss their result with a genetic counsellor at no (CVS or amniocentesis) with chromosome additional cost. Genetic counsellors are experts in assisting people to testing. understand genetic test results and make informed decisions about In some cases, high risk results for XXY may further testing options. represent ‘false positive’ test results. A false positive result means that although NIPT indicates a high risk of XXY, the baby does not What does this result mean? have this condition. NIPT is a way for women to get an accurate estimate of the chance that their baby has one of the most common chromosome conditions: Possible causes of false positive results trisomy 21 (Down syndrome), trisomy 18 and trisomy 13. The test for XXY from NIPT include: may also detect whether there are extra or missing copies of the sex chromosomes, X and Y. -
48,XXYY Syndrome Presenting with Long-Term Infertility and Newly
Alhalabi and Alhalabi Journal of Medical Case Reports (2020) 14:58 https://doi.org/10.1186/s13256-020-02375-z CASE REPORT Open Access 48,XXYY syndrome presenting with long- term infertility and newly observed neck deformities: a case report Mohammad Marwan Alhalabi1* and Marwan Alhalabi2 Abstract Background: Long-term infertility can be attributed to many factors, with the genetic factor being the most overlooked due to its many nonspecific morphological or endocrine signs. We present a rare case of a patient with progressive testicular failure associated with 48,XXYY syndrome. Case presentation: A 39-year-old Arab man presented to our fertility clinic for fertility treatment. He was diagnosed with primary infertility, which had been present for 20 years at the time of presentation. Our patient had nonspecific morphological features of an abnormally wide neck with front slouching neck posture, clinodactyly of the third finger, and had moderate hypoandrogenemic features. A semen analysis revealed azoospermia. Genetic tests for azoospermia, including sex-determining region Y (SRY) detection and chromosome Y microdeletion, revealed no deletion present on the Y chromosome. Karyotyping was used and our patient was diagnosed with 48,XXYY syndrome. Conclusion: Genetic testing (karyotyping and so on) played a key role in the diagnosis of our patient with long-term primary infertility secondary to 48,XXYY syndrome, and should play a vital role in all cases of long-term infertility, especially when presentation is accompanied by endocrine, skeletal, or morphological symptoms, signifying an underlying genetic factor. Keywords: aneuploidy, sex chromosomes, clinical manifestations, diagnosis, genetics, infertility Background 48,XXYY syndrome and could include radio-ulnar synos- 48,XXYY syndrome was first described in the medical lit- tosis, osteoporosis, hyperostosis, pseudoepiphysis, kyphos- erature in 1960 by Muldal et al. -
Phenotype Manifestations of Polysomy X at Males
PHENOTYPE MANIFESTATIONS OF POLYSOMY X AT MALES Amra Ćatović* &Centre for Human Genetics, Faculty of Medicine, University of Sarajevo, Čekaluša , Sarajevo, Bosnia and Herzegovina * Corresponding author Abstract Klinefelter Syndrome is the most frequent form of male hypogonadism. It is an endocrine disorder based on sex chromosome aneuploidy. Infertility and gynaecomastia are the two most common symptoms that lead to diagnosis. Diagnosis of Klinefelter syndrome is made by karyotyping. Over years period (-) patients have been sent to “Center for Human Genetics” of Faculty of Medicine in Sarajevo from diff erent medical centres within Federation of Bosnia and Herzegovina with diagnosis suspecta Klinefelter syndrome, azoo- spermia, sterilitas primaria and hypogonadism for cytogenetic evaluation. Normal karyotype was found in (,) subjects, and karyotype was changed in (,) subjects. Polysomy X was found in (,) examinees. Polysomy X was expressed at the age of sexual maturity in the majority of the cases. Our results suggest that indication for chromosomal evaluation needs to be established at a very young age. KEY WORDS: polysomy X, hypogonadism, infertility Introduction Structural changes in gonosomes (X and Y) cause different distribution of genes, which may be exhibited in various phenotypes. Numerical aberrations of gonosomes have specific pattern of phenotype characteristics, which can be classified as clini- cal syndrome. Incidence of gonosome aberrations in males is / male newborn (). Klinefelter syndrome is the most common chromosomal disorder associated with male hypogonadism. According to different authors incidence is / male newborns (), /- (), and even / (). Very high incidence indicates that the zygotes with Klinefelter syndrome are more vital than those with other chromosomal aberrations. BOSNIAN JOURNAL OF BASIC MEDICAL SCIENCES 2008; 8 (3): 287-290 AMRA ĆATOVIĆ: PHENOTYPE MANIFESTATIONS OF POLYSOMY X AT MALES In , Klinefelter et al. -
RD-Action Matchmaker – Summary of Disease Expertise Recorded Under
Summary of disease expertise recorded via RD-ACTION Matchmaker under each Thematic Grouping and EURORDIS Members’ Thematic Grouping Thematic Reported expertise of those completing the EURORDIS Member perspectives on Grouping matchmaker under each heading Grouping RD Thematically Rare Bone Achondroplasia/Hypochondroplasia Achondroplasia Amelia skeletal dysplasia’s including Achondroplasia/Growth hormone cleidocranial dysostosis, arthrogryposis deficiency/MPS/Turner Brachydactyly chondrodysplasia punctate Fibrous dysplasia of bone Collagenopathy and oncologic disease such as Fibrodysplasia ossificans progressive Li-Fraumeni syndrome Osteogenesis imperfecta Congenital hand and fore-foot conditions Sterno Costo Clavicular Hyperostosis Disorders of Sex Development Duchenne Muscular Dystrophy Ehlers –Danlos syndrome Fibrodysplasia Ossificans Progressiva Growth disorders Hypoparathyroidism Hypophosphatemic rickets & Nutritional Rickets Hypophosphatasia Jeune’s syndrome Limb reduction defects Madelung disease Metabolic Osteoporosis Multiple Hereditary Exostoses Osteogenesis imperfecta Osteoporosis Paediatric Osteoporosis Paget’s disease Phocomelia Pseudohypoparathyroidism Radial dysplasia Skeletal dysplasia Thanatophoric dwarfism Ulna dysplasia Rare Cancer and Adrenocortical tumours Acute monoblastic leukaemia Tumours Carcinoid tumours Brain tumour Craniopharyngioma Colon cancer, familial nonpolyposis Embryonal tumours of CNS Craniopharyngioma Ependymoma Desmoid disease Epithelial thymic tumours in -
A Case Report of Rare Sex Chromosomal Aneuploidy: 48,XXXY/49,XXXXY Rao Swathi S 1, Arumugam Meenakshi 2, Shetty Prashanth D 3, Shenoy Vijaya D 4
Corresponding Author: Dr. Rohit David, MBBS, Post Graduate Resident in Department of Community Medicine, Christian Medical College and Hospital, Ludhiana, Punjab. E-mail: [email protected] www.ijrhs.com Case Report ISSN (o):2321–7251 A case report of rare sex chromosomal aneuploidy: 48,XXXY/49,XXXXY Rao Swathi S 1, Arumugam Meenakshi 2, Shetty Prashanth D 3, Shenoy Vijaya D 4 1. MBBS, DNB(Paediatrics), Senior Resident, Department of Paediatrics. 2. MSc Biotechnology, Lecturer/Research Associate, Diagnostic Centre for Cytogenetics and Molecular genetics. 3. PhD, Professor/ Coordinator, Diagnostic Centre for Cytogenetics and Molecular genetics. 4. MBBS, DCH, MD(Paediatrics),Professor/Head of the Department, Department of Paediatrics. Corresponding Author: Dr Swathi S Rao, 23-13/23(1), Shivakripa, Koragappa Compound, 3 rd Cross Kapikad, Ullal, Mangalore- 575020 . Email: [email protected] Abstract: The sex chromosome aneuploidy 49,XXXXY is a rare syndrome characterized by mental retardation, severe speech impairment, multiple skeletal defects, genital abnormalities and subtle dysmorphic features. The incidence of 48,XXXY/49,XXXXY is very rare and to our knowledge only few reports of mosaicism have been reported so far but with different cell line proportions. We describe a case with 48,XXXY[16]/49,XXXXY[4] mosaicism in a four year old boy with microcephaly, short stature, expressive speech delay, and clinodactyly. Karyotyping showed mosaicism with 48XXXY[16]/49XXXXY[4] and was confirmed by FISH analysis. Key words: Short stature; Expressive speech delay; Sex chromosomal aneuploidy Key Messages: Case History: Males with subtle dysmorphism and A four year old phenotypically male, was expressive speech delay are candidates for referred for evaluation of his speech delay. -
49,XXXXY Syndrome
49,XXXXY syndrome Description 49,XXXXY syndrome is a chromosomal condition in boys and men that causes intellectual disability, developmental delays, physical differences, and an inability to father biological children (infertility). Its signs and symptoms vary among affected individuals. Boys and men with 49,XXXXY syndrome have mild or moderate intellectual disability with learning difficulties. Speech and language development is particularly affected. Most affected boys and men can understand what other people say more easily than they themselves can speak. People with 49,XXXXY syndrome tend to be shy and friendly, but problems with speech and communication can contribute to behavioral issues, including irritability, difficulty tolerating frustration, defiant behavior, and outbursts or temper tantrums. 49,XXXXY syndrome is also associated with weak muscle tone (hypotonia) and problems with coordination that delay the development of motor skills, such as sitting, standing, and walking. Affected infants and young boys are often shorter than their peers, but some catch up in height later in childhood or adolescence. Other physical differences associated with 49,XXXXY syndrome include abnormal fusion of certain bones in the forearm (radioulnar synostosis), an unusually large range of joint movement (hyperextensibility), elbow abnormalities, curved pinky fingers (fifth finger clinodactyly), and flat feet (pes planus). Affected individuals have distinctive facial features that can include widely spaced eyes (ocular hypertelorism), outside corners of the eyes that point upward (upslanting palpebral fissures), skin folds covering the inner corner of the eyes (epicanthal folds), and a flat bridge of the nose. Dental abnormalities are also common in this disorder. 49,XXXXY syndrome disrupts male sexual development. -
Klinefelter Syndrome DANIEL J
ANNUAL CLINICAL FOCUS Klinefelter Syndrome DANIEL J. WATTENDORF, MAJ, MC, USAF, and MAXIMILIAN MUENKE, M.D. National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland To complement the 2005 Annual Clinical Focus on medical genom- ics, AFP is publishing a series of short reviews on genetic syndromes. This series was designed to increase awareness of these diseases so that family physicians can recognize and diagnose children with these disorders and understand the kind of care they might require in the future. This review discusses Klinefelter syndrome. (Am Fam Physician 2005;72:2259-62 Copyright © 2005 American Academy of Family Physicians.) This article exem- linefelter syndrome is caused by Body habitus may be feminized (Figure 1). plifies the AAFP 2005 an additional X chromosome in In childhood, when there is a relative quies- Annual Clinical Focus on the legal, social, clinical, males (47,XXY). Clinical findings cence in the hormonal milieu, ascertainment and ethical issues of medi- are nonspecific during childhood; of the syndrome may be difficult because the cal genomics. Kthus, the diagnosis commonly is made during effects of hypogonadism (i.e., small external A glossary of genomics adolescence or adulthood in males who have genitalia and firm testes) may be subtle or terms is available online small testes with hypergonadotropic hypogo- not present at all. at http://www.aafp.org/ nadism and gynecomastia. Virtually all men Persistent androgen deficiency in adult- afpgenglossary.xml. with Klinefelter -
Sex Chromosome Aneuploidies
7 Sex Chromosome Aneuploidies Eliona Demaliaj1, Albana Cerekja2 and Juan Piazze3 1Department of Obstetric-Gynecology, Faculty of Medicine, University of Tirana Hospital "Mbreteresha Geraldine", Tirane 2Gynecology and Obstetrics Ultrasound Division, ASL Roma B, Rome 3Ultrasound Division, Ospedale di Ceprano/Ospedale SS. Trinità di Sora, Frosinone 1Albania 2,3Italy 1. Introduction Sex chromosome aneuploidy is defined as a numeric abnormality of an X or Y chromosome, with addition or loss of an entire X or Y chromosome. Sex chromosome mosaicism, in which one or more populations of cells have lost or gained a sex chromosome, also is common. The most commonly occurring sex chromosome mosaic karyotypes include 45,X/46XX, 46XX/47,XXX, and 46,XY/47,XXY. Less frequent are those sex chromosome abnormalities where addition of more than one sex chromosome or a structural variant of an X or Y chromosome occur. The X chromosome is one of the two sex-determining chromosomes in many animal species, including mammals and is common in both males and females. It is a part of the XY and X0 sex-determination system. The X chromosome in humans represents about 2000 out of 20,000 - 25,0000 genes. Normal human females have 2 X-chromosomes (XX), for a total of nearly 4000 "sex-tied" genes (many of which have nothing to do with sex, other than being attached to the chromosome that is believed to cause sexual bimorphism (or polymorphism if you count more rare variations). Men have, depending on the study, 1400-1900 fewer genes, as the Y chromosome is thought to have only the remaining genes down from an estimated 1438 -~2000 (Graves 2004). -
Orphanet Report Series Rare Diseases Collection
Marche des Maladies Rares – Alliance Maladies Rares Orphanet Report Series Rare Diseases collection DecemberOctober 2013 2009 List of rare diseases and synonyms Listed in alphabetical order www.orpha.net 20102206 Rare diseases listed in alphabetical order ORPHA ORPHA ORPHA Disease name Disease name Disease name Number Number Number 289157 1-alpha-hydroxylase deficiency 309127 3-hydroxyacyl-CoA dehydrogenase 228384 5q14.3 microdeletion syndrome deficiency 293948 1p21.3 microdeletion syndrome 314655 5q31.3 microdeletion syndrome 939 3-hydroxyisobutyric aciduria 1606 1p36 deletion syndrome 228415 5q35 microduplication syndrome 2616 3M syndrome 250989 1q21.1 microdeletion syndrome 96125 6p subtelomeric deletion syndrome 2616 3-M syndrome 250994 1q21.1 microduplication syndrome 251046 6p22 microdeletion syndrome 293843 3MC syndrome 250999 1q41q42 microdeletion syndrome 96125 6p25 microdeletion syndrome 6 3-methylcrotonylglycinuria 250999 1q41-q42 microdeletion syndrome 99135 6-phosphogluconate dehydrogenase 67046 3-methylglutaconic aciduria type 1 deficiency 238769 1q44 microdeletion syndrome 111 3-methylglutaconic aciduria type 2 13 6-pyruvoyl-tetrahydropterin synthase 976 2,8 dihydroxyadenine urolithiasis deficiency 67047 3-methylglutaconic aciduria type 3 869 2A syndrome 75857 6q terminal deletion 67048 3-methylglutaconic aciduria type 4 79154 2-aminoadipic 2-oxoadipic aciduria 171829 6q16 deletion syndrome 66634 3-methylglutaconic aciduria type 5 19 2-hydroxyglutaric acidemia 251056 6q25 microdeletion syndrome 352328 3-methylglutaconic