Plants and Animals As Geobiological Agents
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GTL PI Meeting 2003 Presentation Nealson
USCUSC Geobiology Astrobiology Ken Nealson Wrigley Professor of Geobiology USC SHEWANELLA and Genomes to Life !! THE FUTURE!! WHERE ARE WE GOING? HOW WILL WE GET THERE? WHAT ARE THE CHALLENGES AND TRAPS? USCUSC Geobiology Astrobiology Genomes to Life: Shewanella and the future !! Genomes & Genomics: For sake of this discussion, I include Genome composition, gene expression, & metabolism Genomics Physiology Ecophsyiology Ecology Predictable Community Behavior Successful Manipulation of Natural Communities USCUSC Geobiology Astrobiology Shewanella in the future: Short Term: Genomic/Proteomic/Metabolic Connections Linkage of physiology to genomic information Mid Term: Ecophysiology Questions regarding regulation of MR-1 How does the cell”work”? Linkage of laboratory to microcosm and field data Long Term: Community structure and activities Genetic variability and use of genomic approaches Predictable community ecology The “old view” of Shewanella oneidensis Gamma Purple proteobacteria MR-1; when Isolated was One of ~10, Now >50 ! USCUSC Geobiology Astrobiology The “new view” of Shewanella Now MR-1 is again one of 1, although a strain of S. benthica is almost finished by a Japanese group (JAMSTEC) USCUSC Geobiology Astrobiology Excitement of the “new view”: May be able to use this information to dissect specific aspects of both ecology and evolution: Ecology: Involved in many different redox processes Aerobic and anaerobic niches Metal cycling connected with carbon cycling Potential for dealing with many toxic metals and radionuclides Can we understand Shewanella well enough to begin to use it? what it does how it does it how it regulates how it interacts with other organisms All of this well enough to make predictions that work. -
Health, the Global Ocean and Marine Resources 1 Marine Pollution Can Poison Us
HEALTH, THE GLOBAL OCEAN AND MARINE POLICY BRIEF RESOURCES The global ocean (interconnected system of Earth’s oceanic waters) plays Key messages a central and positive role in human life, including through the climate system. Damage to the ocean is far-reaching in its effects, in terms of Taking action on one SDG productivity, species diversity and resilience. Global ocean activities are gets results in others: health putting populations at risk (1). runs through every SDG. The “health” of the global ocean is both affected by and a threat to human activities. People have lived in harmony with the ocean for generations and ENSURE HEALTHY have relied on its bounty. Fish and seafood from a healthy ocean LIVES AND PROMOTE contribute to our health. The best-documented and direct benefits WELL-BEING FOR ALL AT ALL AGES. to human health and well-being from the ocean are linked to the consumption of fish and seafood, rich in omega-3 fatty acids, and non-terrestrial animal proteins. Indirect benefits to health also CONSERVE AND SUSTAINABLY USE arise from marine-derived pharmaceuticals and vitamins. THE OCEANS, SEAS AND MARINE RESOURCES FOR SUSTAINABLE Society benefits from the seas. The coastal waters provide DEVELOPMENT. employment, commerce, cultural, social interaction and artistic activities. They offer a variety of social, economic, health, cultural and environmental benefits to human livelihoods (2). The global ocean helps people to feel good. There is increasing recognition of the value of coastal waters in promoting better mental health through decreased vulnerability to depression. Better physical and mental health is also gained through exercise, such as swimming, walking and sailing. -
Thoughts in Geobiology
Journal of Geology and Mining Research Vol. 1(8), October, 2009 Available online http://www.academicjournals.org/jgmr ISSN 2006 – 9766 © 2009 Academic Journals Editorial Thoughts in Geobiology One of the possible ways to make connection between geologists and biologists is through studying subjects related to the newly established trend “Geobiology”. In the year 1972, Sylvester-Bradley stated that the Earth sciences include not only geology, but the hybrid-sciences geophysics, geochemistry and geobiology, of which the most complex and least rigorous is geobiology. Kump (2008) simply defined geobiology as the field that has recently energized the life and Earth sciences as geologists and biologists bring new tools to collaborations addressing fundamental problems that transcend the disciplines. The book edited by Xiao and Kaufman (2007) includes a set of multidisciplinary reviews on the Neoproterozoic fossil record (animals, algae, acritarchs, protists, and trace fossils), evolutionary developmental biology of animals, molecular clock estimates of phylogenetic divergences, and Neoproterozoic chemostratigraphy and sedimentary geology. The editors of this book believe that these topics are of continuing interest to geoscientists and bioscientists who are intrigued by the deep history of the Earth and its inhabitants. Yildirim et al. (2008) believe that microbial systems in extreme environments and in the deep biosphere may be analogous to potential life on other planetary bodies and hence may be used to investigate the possibilities of extraterrestrial life. I would add that astrobiologists are working on this point through studying materials from Mars. Through geobiology we search for origins and evolution of life, atmosphere, hydrosphere, lithosphere and biosphere, reasons of mass extinctions, interactions between microbes and minerals, global changes, and other subjects of interest. -
Rowan C. Martindale Curriculum Vitae Associate Professor (Invertebrate Paleontology) at the University of Texas at Austin
ROWAN C. MARTINDALE CURRICULUM VITAE ASSOCIATE PROFESSOR (INVERTEBRATE PALEONTOLOGY) AT THE UNIVERSITY OF TEXAS AT AUSTIN Department of Geological Sciences E-mail: [email protected] Jackson School of Geosciences Website: www.jsg.utexas.edu/martindale/ 2275 Speedway Stop C9000 Orchid ID: 0000-0003-2681-083X Austin, TX 78712-1722 Phone: 512-475-6439 Office: JSG 3.216A RESEARCH INTERESTS The overarching theme of my work is the connection between Earth and life through time, more precisely, understanding ancient (Mesozoic and Cenozoic) ocean ecosystems and the evolutionary and environmental events that shaped them. My research is interdisciplinary, (paleontology, sedimentology, biology, geochemistry, and oceanography) and focuses on: extinctions and carbon cycle perturbation events (e.g., Oceanic Anoxic Events, acidification events); marine (paleo)ecology and reef systems; the evolution of reef builders (e.g., coral photosymbiosis); and exceptionally preserved fossil deposits (Lagerstätten). ACADEMIC APPOINTMENTS Associate Professor, University of Texas at Austin September 2020 to Present Assistant Professor, University of Texas at Austin August 2014 to August 2020 Postdoctoral Researcher, Harvard University August 2012 to July 2014 Department of Organismic and Evolutionary Biology; Mentor: Dr. Andrew H. Knoll. EDUCATION Doctorate, University of Southern California 2007 to 2012 Dissertation: “Paleoecology of Upper Triassic reef ecosystems and their demise at the Triassic-Jurassic extinction, a potential ocean acidification event”. Advisor: Dr. David J. Bottjer, degree conferred August 7th, 2012. Bachelor of Science Honors Degree, Queen’s University 2003 to 2007 Geology major with a general concentration in Biology (Geological Sciences Medal Winner). AWARDS AND RECOGNITION Awards During Tenure at UT Austin • 2019 National Science Foundation CAREER Award: Awarded to candidates who are judged to have the potential to serve as academic role models in research and education. -
Alaska Birds & Wildlife
Alaska Birds & Wildlife Pribilof Islands - 25th to 27th May 2016 (4 days) Nome - 28th May to 2nd June 2016 (5 days) Barrow - 2nd to 4th June 2016 (3 days) Denali & Kenai Peninsula - 5th to 13th June 2016 (9 days) Scenic Alaska by Sid Padgaonkar Trip Leader(s): Forrest Rowland and Forrest Davis RBT Alaska – Trip Report 2016 2 Top Ten Birds of the Tour: 1. Smith’s Longspur 2. Spectacled Eider 3. Bluethroat 4. Gyrfalcon 5. White-tailed Ptarmigan 6. Snowy Owl 7. Ivory Gull 8. Bristle-thighed Curlew 9. Arctic Warbler 10. Red Phalarope It would be very difficult to accurately describe a tour around Alaska - without drowning the narrative in superlatives to the point of nuisance. Not only is it an inconceivably huge area to describe, but the habitats and landscapes, though far north and less biodiverse than the tropics, are completely unique from one portion of the tour to the next. Though I will do my best, I will fail to encapsulate what it’s like to, for example, watch a coastal glacier calving into the Pacific, while being observed by Harbour Seals and on-looking Murrelets. I can’t accurately describe the sense of wilderness felt looking across the vast glacial valleys and tundra mountains of Nome, with Long- tailed Jaegers hovering overhead, a Rock Ptarmigan incubating eggs near our feet, and Muskoxen staring at us strangers to these arctic expanses. Finally, there is Denali: squinting across jagged snowy ridges that tower above 10,000 feet, mere dwarfs beneath Denali standing 20,300 feet high, making everything else in view seem small, even toy-like, by comparison. -
Dornbos.Web.CV
Stephen Quinn Dornbos Associate Professor and Department Chair Department of Geosciences University of Wisconsin-Milwaukee Milwaukee, WI 53201-0413 Phone: (414) 229-6630 Fax: (414) 229-5452 E-mail: [email protected] http://uwm.edu/geosciences/people/dornbos-stephen/ EDUCATION 2003 Ph.D., Geological Sciences, University of Southern California, Los Angeles, CA. 1999 M.S., Geological Sciences, University of Southern California, Los Angeles, CA. 1997 B.A., Geology, The College of Wooster, Wooster, OH. ADDITIONAL EDUCATION 2002 University of Washington, Summer Marine Invertebrate Zoology Course, Friday Harbor Laboratories. 1997 Louisiana State University, Summer Field Geology Course. PROFESSIONAL EXPERIENCE 2017-Present Department Chair, Department of Geosciences, University of Wisconsin-Milwaukee. 2010-Present Associate Professor, Department of Geosciences, University of Wisconsin-Milwaukee. 2004-2010 Assistant Professor, Department of Geosciences, University of Wisconsin-Milwaukee. 2012-Present Adjunct Curator, Geology Department, Milwaukee Public Museum. 2004-Present Curator, Greene Geological Museum, University of Wisconsin- Milwaukee. 2003-2004 Postdoctoral Research Fellow, Department of Earth Sciences, University of Southern California. 2002 Research Assistant, Invertebrate Paleontology Department, Natural History Museum of Los Angeles County. EDITORIAL POSITIONS 2017-Present Editorial Board, Heliyon. 2015-Present Board of Directors, Coquina Press. 2014-Present Commentaries Editor, Palaeontologia Electronica. 2006-Present Associate Editor, Palaeontologia Electronica. Curriculum Vitae – Stephen Q. Dornbos 2 RESEARCH INTERESTS 1) Evolution and preservation of early life on Earth. 2) Evolutionary paleoecology of early animals during the Cambrian radiation. 3) Geobiology of microbial structures in Precambrian–Cambrian sedimentary rocks. 4) Cambrian reef evolution, paleoecology, and extinction. 5) Exceptional fossil preservation. HONORS AND AWARDS 2013 UWM Authors Recognition Ceremony. 2011 Full Member, Sigma Xi. -
Spontaneous Generation & Origin of Life Concepts from Antiquity to The
SIMB News News magazine of the Society for Industrial Microbiology and Biotechnology April/May/June 2019 V.69 N.2 • www.simbhq.org Spontaneous Generation & Origin of Life Concepts from Antiquity to the Present :ŽƵƌŶĂůŽĨ/ŶĚƵƐƚƌŝĂůDŝĐƌŽďŝŽůŽŐLJΘŝŽƚĞĐŚŶŽůŽŐLJ Impact Factor 3.103 The Journal of Industrial Microbiology and Biotechnology is an international journal which publishes papers in metabolic engineering & synthetic biology; biocatalysis; fermentation & cell culture; natural products discovery & biosynthesis; bioenergy/biofuels/biochemicals; environmental microbiology; biotechnology methods; applied genomics & systems biotechnology; and food biotechnology & probiotics Editor-in-Chief Ramon Gonzalez, University of South Florida, Tampa FL, USA Editors Special Issue ^LJŶƚŚĞƚŝĐŝŽůŽŐLJ; July 2018 S. Bagley, Michigan Tech, Houghton, MI, USA R. H. Baltz, CognoGen Biotech. Consult., Sarasota, FL, USA Impact Factor 3.500 T. W. Jeffries, University of Wisconsin, Madison, WI, USA 3.000 T. D. Leathers, USDA ARS, Peoria, IL, USA 2.500 M. J. López López, University of Almeria, Almeria, Spain C. D. Maranas, Pennsylvania State Univ., Univ. Park, PA, USA 2.000 2.505 2.439 2.745 2.810 3.103 S. Park, UNIST, Ulsan, Korea 1.500 J. L. Revuelta, University of Salamanca, Salamanca, Spain 1.000 B. Shen, Scripps Research Institute, Jupiter, FL, USA 500 D. K. Solaiman, USDA ARS, Wyndmoor, PA, USA Y. Tang, University of California, Los Angeles, CA, USA E. J. Vandamme, Ghent University, Ghent, Belgium H. Zhao, University of Illinois, Urbana, IL, USA 10 Most Cited Articles Published in 2016 (Data from Web of Science: October 15, 2018) Senior Author(s) Title Citations L. Katz, R. Baltz Natural product discovery: past, present, and future 103 Genetic manipulation of secondary metabolite biosynthesis for improved production in Streptomyces and R. -
Alexander 2013 Principles-Of-Animal-Locomotion.Pdf
.................................................... Principles of Animal Locomotion Principles of Animal Locomotion ..................................................... R. McNeill Alexander PRINCETON UNIVERSITY PRESS PRINCETON AND OXFORD Copyright © 2003 by Princeton University Press Published by Princeton University Press, 41 William Street, Princeton, New Jersey 08540 In the United Kingdom: Princeton University Press, 3 Market Place, Woodstock, Oxfordshire OX20 1SY All Rights Reserved Second printing, and first paperback printing, 2006 Paperback ISBN-13: 978-0-691-12634-0 Paperback ISBN-10: 0-691-12634-8 The Library of Congress has cataloged the cloth edition of this book as follows Alexander, R. McNeill. Principles of animal locomotion / R. McNeill Alexander. p. cm. Includes bibliographical references (p. ). ISBN 0-691-08678-8 (alk. paper) 1. Animal locomotion. I. Title. QP301.A2963 2002 591.47′9—dc21 2002016904 British Library Cataloging-in-Publication Data is available This book has been composed in Galliard and Bulmer Printed on acid-free paper. ∞ pup.princeton.edu Printed in the United States of America 1098765432 Contents ............................................................... PREFACE ix Chapter 1. The Best Way to Travel 1 1.1. Fitness 1 1.2. Speed 2 1.3. Acceleration and Maneuverability 2 1.4. Endurance 4 1.5. Economy of Energy 7 1.6. Stability 8 1.7. Compromises 9 1.8. Constraints 9 1.9. Optimization Theory 10 1.10. Gaits 12 Chapter 2. Muscle, the Motor 15 2.1. How Muscles Exert Force 15 2.2. Shortening and Lengthening Muscle 22 2.3. Power Output of Muscles 26 2.4. Pennation Patterns and Moment Arms 28 2.5. Power Consumption 31 2.6. Some Other Types of Muscle 34 Chapter 3. -
165 Cold Feet
Cold Feet: Addressing the Effect of Human Activity in Antarctica on Terrestrial Wildlife 165 cold feet: addressing the effect of human actiVity in antarctica on terrestrial wildlife andrew J. Koper* i. introduction “‘Great [G]od! This is an awful place.’”1 Those were some of Captain Robert Falcon Scott’s last words after he arrived at the South Pole.2 Not long after Scott entered those words into his journal, his team died off from the cold.3 One of the men, Captain Lawrence Oates, wished to die in his sleep, but after awaking, stated his famous outside and may be some time.”4 The rest of the team perished soon after Oates.5 simple mistake in Antarctica can lead to death.6 But while humans are not well suited to survive in Antarctica without life support supplies,7 others have adapted to thrive in the frigid environment. and simple vegetation have gained a foothold.8 Humans have entered portion of the continent that can foster life.9 Humans and animals interact to Professor Finkmoore for guiding me down the path to what ultimately became this Article. Thanks to Matt Springmeyer, who provided invaluable help to me in editing my fourth draft, and to Jacob Harding, without whom none of this would have been possible. Special thanks to my Oma and Opa, who provided a very comfortable study to the staff of the Journal of Animal & Natural Resource Law for their editing work. 1 Gabrielle Walker, The Great Thaw, n.y. times (June 21, 2012), http://www. 2 Id. 3 Id. -
Biomechanics of Terrestrial Locomotion: Asymmetric Octopedal and Quadrupedal Gaits
SCUOLA DI DOTTORATO IN SCIENZE MORFOLOGICHE, FISIOLOGICHE E DELLO SPORT DIPARTIMENTO DI FISIOLOGIA UMANA DOTTORATO DI RICERCA IN FISIOLOGIA CICLO XXIV Biomechanics of terrestrial locomotion: asymmetric octopedal and quadrupedal gaits SETTORE SCIENTIFICO DISCIPLINARE BIO-09 PhD Student: Dott. Carlo M. Biancardi Matricola: R08161 Tutor: Prof. Alberto E. Minetti Coordinatore: Prof. Paolo Cavallari Anno Accademico 2010-2011 Table of Contents Abstract...................................................................................................... 5 Introduction ...............................................................................................8 Foreword.................................................................................................................. 8 Objectives .................................................................................................................8 Thesis structure........................................................................................................ 8 Terrestrial legged locomotion ..................................................................9 Introduction .............................................................................................................9 Energetics and mechanics of terrestrial legged locomotion ................................10 Limbs mechanics ..........................................................................................................10 Size differences .............................................................................................................14 -
Twelve Testable Hypotheses on the Geobiology of Weathering S
Geobiology (2011) DOI: 10.1111/j.1472-4669.2010.00264.x Twelve testable hypotheses on the geobiology of weathering S. L. BRANTLEY,1 J. P. MEGONIGAL,2 F. N. SCATENA,3 Z. BALOGH-BRUNSTAD,4 R. T. BARNES,5 M. A. BRUNS,6 P. VAN CAPPELLEN,7 K. DONTSOVA,8 H. E. HARTNETT,9 A. S. HARTSHORN,10 A. HEIMSATH,11 E. HERNDON,1 L. JIN,1 C. K. KELLER,12 J. R. LEAKE,13 W. H. MCDOWELL,14 F. C. MEINZER,15 T. J. MOZDZER,2 S. PETSCH,16 J. PETT-RIDGE,17 K. S. PREGITZER,18 P. A. RAYMOND,19 C. S. RIEBE,20 K. SHUMAKER,21 A. SUTTON-GRIER,2 R. WALTER22 AND K. YOO23 1Earth and Environmental Systems Institute, Pennsylvania State University, University Park, PA, USA 2Smithsonian Environmental Research Center, Edgewater, MD, USA 3Department of Earth and Environmental Science, University of Pennsylvania, Philadelphia, PA, USA 4Departments of Geology, Environmental Sciences and Chemistry, Hartwick College, Oneonta, NY, USA 5Department of Geological Sciences, University of Colorado, Boulder, CO, USA 6Department of Crop and Soil Sciences, Pennsylvania State University, University Park, PA, USA 7School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, GA, USA 8Biosphere 2 Earthscience, University of Arizona, Tucson, AZ, USA 9School of Earth and Space Exploration, and Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ, USA 10Department of Geology and Environmental Science, James Madison University, Harrisonburg, VA, USA 11School of Earth and Space Exploration, Arizona State University, Tempe, AZ, USA 12School of Earth and -
Visitor Guidelines for the Antarctic Imprint
Visitor Guidelines for the Antarctic Imprint Editor: German Environment Agency Section II 2.8 P.O. Box 14 06 D-06813 Dessau-Roßlau Phone: ++ 49-340-2103-0 [email protected] Web: www.umweltbundesamt.de /umweltbundesamt.de /umweltbundesamt Authors: Rita Fabris, Heike Herata, Fritz Hertel, Jacqueline Hilbert, Manuela Krakau, Dagmar Larws, Mirjam Müller and Wiebke Schwarzbach Editor: Manuela Krakau Download as pdf: www.umweltbundesamt.de/publikationen/ visitor-guidelines-for-antarctic Photo credits: Cover picture: Susanne Kambor Pages 3, 4/5, 7, 10, 12/13: Susanne Kambor Page 8: Fritz Hertel Page 11 – Footprints in the moss: Osama Mustafa Page 14 – White-out effect: Hannes Grobe Published: September 2017 ISSN 2363-832X Dear Travellers! You are going to visit the Antarctic for private or professional reasons? You are about to discover for the first time or to revisit the “White Continent”? To support your safe and sustainable stay in the Antarctic we elaborated these guidelines for you. The extreme Antarctic landscape and climate are fascinating and motivating increasing numbers of visitors. Many consider a journey to this region one of the “great challenges”. Despite this fascination, visitors need to keep in mind that Antarctica is in no way comparable to other tourist destinations of the world. Particularly in case of emergencies, you need to rely mainly on yourself as external rescue options are very limited. To preserve the Antarctic’s pristine conditions for the future, internationally coordinated guidelines are in place for visitors to the Antarctic. On the following pages, we aim to familiarise you with these regulations. Please keep these guidelines in mind during your stay.