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Multilocus Analysis of the Catfish Family Trichomycteridae (Teleostei: Ostario- Physi: Siluriformes) Supporting a Monophyletic Trichomycterinae
Accepted Manuscript Multilocus analysis of the catfish family Trichomycteridae (Teleostei: Ostario- physi: Siluriformes) supporting a monophyletic Trichomycterinae Luz E. Ochoa, Fabio F. Roxo, Carlos DoNascimiento, Mark H. Sabaj, Aléssio Datovo, Michael Alfaro, Claudio Oliveira PII: S1055-7903(17)30306-8 DOI: http://dx.doi.org/10.1016/j.ympev.2017.07.007 Reference: YMPEV 5870 To appear in: Molecular Phylogenetics and Evolution Received Date: 28 April 2017 Revised Date: 4 July 2017 Accepted Date: 7 July 2017 Please cite this article as: Ochoa, L.E., Roxo, F.F., DoNascimiento, C., Sabaj, M.H., Datovo, A., Alfaro, M., Oliveira, C., Multilocus analysis of the catfish family Trichomycteridae (Teleostei: Ostariophysi: Siluriformes) supporting a monophyletic Trichomycterinae, Molecular Phylogenetics and Evolution (2017), doi: http://dx.doi.org/10.1016/ j.ympev.2017.07.007 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. Multilocus analysis of the catfish family Trichomycteridae (Teleostei: Ostariophysi: Siluriformes) supporting a monophyletic Trichomycterinae Luz E. Ochoaa, Fabio F. Roxoa, Carlos DoNascimientob, Mark H. Sabajc, Aléssio -
Water Diversion in Brazil Threatens Biodiversit
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/332470352 Water diversion in Brazil threatens biodiversity Article in AMBIO A Journal of the Human Environment · April 2019 DOI: 10.1007/s13280-019-01189-8 CITATIONS READS 0 992 12 authors, including: Vanessa Daga Valter Monteiro de Azevedo-Santos Universidade Federal do Paraná 34 PUBLICATIONS 374 CITATIONS 17 PUBLICATIONS 248 CITATIONS SEE PROFILE SEE PROFILE Fernando Pelicice Philip Fearnside Universidade Federal de Tocantins Instituto Nacional de Pesquisas da Amazônia 68 PUBLICATIONS 2,890 CITATIONS 612 PUBLICATIONS 20,906 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Freshwater microscrustaceans from continental Ecuador and Galápagos Islands: Integrative taxonomy and ecology View project Conservation policy View project All content following this page was uploaded by Philip Fearnside on 11 May 2019. The user has requested enhancement of the downloaded file. The text that follows is a PREPRINT. O texto que segue é um PREPRINT. Please cite as: Favor citar como: Daga, Vanessa S.; Valter M. Azevedo- Santos, Fernando M. Pelicice, Philip M. Fearnside, Gilmar Perbiche-Neves, Lucas R. P. Paschoal, Daniel C. Cavallari, José Erickson, Ana M. C. Ruocco, Igor Oliveira, André A. Padial & Jean R. S. Vitule. 2019. Water diversion in Brazil threatens biodiversity: Potential problems and alternatives. Ambio https://doi.org/10.1007/s13280-019- 01189-8 . (online version published 27 April 2019) ISSN: 0044-7447 (print version) ISSN: 1654-7209 (electronic version) Copyright: Royal Swedish Academy of Sciences & Springer Science+Business Media B.V. -
A New Species of Sand-Dwelling Catfish, with a Phylogenetic Diagnosis of Pygidianops Myers (Siluriformes: Trichomycteridae: Glanapteryginae)
Neotropical Ichthyology, 9(3): 493-504, 2011 Copyright © 2011 Sociedade Brasileira de Ictiologia A new species of sand-dwelling catfish, with a phylogenetic diagnosis of Pygidianops Myers (Siluriformes: Trichomycteridae: Glanapteryginae) Mário C. C. de Pinna1 and Alexandre L. Kirovsky2 A new species of sand-dwelling catfish genus Pygidianops, P. amphioxus, is described from the Negro and lower Amazon basins. The new species differs from its three congeners in the elongate eel-like body, the short barbels, and the small caudal fin, continuous with the body, among other traits of internal anatomy. The absence of anal fin further distinguishes P. amphioxus from all other Pygidianops species except P. magoi and the presence of eyes from all except P. cuao. The new Pygidianops seems to be the sister species to P. magoi, the two species sharing a unique mesethmoid with a dorsally-bent tip lacking cornua, and a produced articular process in the palatine for the articulation with the neurocranium. Pygidianops amphioxus is a permanent and highly-specialized inhabitant of psammic environments. Additional characters are proposed as synapomorphies of Pygidianops, including a hypertrophied symphyseal joint and associated ligament in the lower jaw; an elongate, laterally-directed, process on the dorsal surface of the premaxilla; and a rotated lower jaw, where the surface normally facing laterally in other glanapterygines is instead directed ventrally. These and other characters are incorporated into a revised phylogenetic diagnosis of Pygidianops. Uma nova espécie do gênero de bagre arenícola Pygidianops, P. amphioxus, é descrita de diferentes localidades na Amazônia brasileira. A nova espécie difere de seus três congêneres pelo corpo alongado e anguiliforme, pelos barbilhões curtos e pela pequena nadadeira caudal, contínua com o corpo, além de outras características da anatomia interna. -
Zootaxa, Listrura (Siluriformes: Trichomycteridae)
Zootaxa 1142: 43–50 (2006) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 1142 Copyright © 2006 Magnolia Press ISSN 1175-5334 (online edition) A new glanapterygine catfish of the genus Listrura (Siluriformes: Trichomycteridae) from the southeastern Brazilian coastal plains LEANDRO VILLA-VERDE1 & WILSON J. E. M. COSTA2 Laboratório de Ictiologia Geral e Aplicada, Departamento de Zoologia, Universidade Federal do Rio de Jan- eiro, Caixa Postal 68049, CEP 21944-970, Rio de Janeiro, Brasil. E-mail: 1 [email protected]; 2 [email protected] Abstract Listrura picinguabae, new species, is described from small tributary streams of rio da Fazenda, an isolated coastal river in Picinguaba, São Paulo State, southeastern Brazil. It is distinguished from all other trichomycterids, except L. nematopteryx, in possessing a single long pectoral-fin ray. It differs from L. nematopteryx by a combination of features including relative position of anal and dorsal-fin origins, higher number of anal-fin rays and opercular and interopercular odontodes, and morphology of the urohyal. Key words: Listrura, Glanapteryginae, Trichomycteridae, catfish, new species, taxonomy, southeastern Brazil Resumo É descrita Listrura picinguabae, nova espécie, para pequenos córregos adjacentes ao rio da Fazenda, Picinguaba, Estado de São Paulo, sudeste do Brasil. A nova espécie distingue-se dos demais membros da família Trichomycteridae, exceto L. nematopteryx, por possuir um único longo raio na nadadeira peitoral. Difere de L. nematopteryx pela combinação dos seguintes caracteres: posições relativas das nadadeiras anal e dorsal; maior número de raios da nadadeira anal e de odontóides operculares e interoperculares; morfologia do uro-hial. Introduction Listrura de Pinna is the only genus of the subfamily Glanapteryginae occurring in small coastal rivers basins of southern and southeastern Brazil (de Pinna, 1988; Nico & de Pinna, 1996; Landim & Costa, 2002; de Pinna & Wosiacki, 2002). -
Lista De Espécies
IV Oficina de Avaliação do Estado de Conservação de Peixes Amazônicos Ordem Família Espécie 1 Gymnotiformes Apteronotidae Adontosternarchus balaenops (Cope 1878) 2 Gymnotiformes Apteronotidae Adontosternarchus clarkae Mago-Leccia, Lundberg & Baskin 1985 3 Gymnotiformes Apteronotidae Adontosternarchus duartei de Santana & Vari 2012 4 Gymnotiformes Apteronotidae Adontosternarchus nebuosus Lundberg & Cox Fernandes 2007 5 Gymnotiformes Apteronotidae Adontosternarchus sachsi (Peters 1877) 6 Gymnotiformes Apteronotidae Apteronotus albifrons (Linnaeus 1766) 7 Gymnotiformes Apteronotidae Apteronotus apurensis Fernández-Yépez 1968 8 Gymnotiformes Apteronotidae Apteronotus bonapartii (Castelnau 1855) 9 Gymnotiformes Apteronotidae Apteronotus camposdapazi de Santana & Lehmann A. 2006 10 Gymnotiformes Apteronotidae Apteronotus leptorhynchus (Ellis 1912) 11 Gymnotiformes Apteronotidae Apteronotus macrolepis (Steindachner 1881) 12 Gymnotiformes Apteronotidae Compsaraia samueli Albert & Crampton 2009 13 Gymnotiformes Apteronotidae Magosternarchus duccis Lundberg, Cox Fernandes & Albert 1996 14 Gymnotiformes Apteronotidae Magosternarchus raptor Lundberg, Cox Fernandes & Albert 1996 15 Gymnotiformes Apteronotidae Megadontognathus kaitukaensis Campos-da-Paz 1999 16 Gymnotiformes Apteronotidae Orthosternarchus tamandua (Boulenger 1898) 17 Gymnotiformes Apteronotidae Parapteronotus hasemani (Ellis 1913) 18 Gymnotiformes Apteronotidae Pariosternarchus amazonensis Albert & Crampton 2006 19 Gymnotiformes Apteronotidae Platyurosternarchus crypticus de Santana -
(Siluriformes: Diplomystidae) in Coastal River Basins of Chile and Its Implications for Conservation
Neotropical Ichthyology Original article https://doi.org/10.1590/1982-0224-2019-0073 A Century after! Rediscovery of the ancient catfish Diplomystes Bleeker 1858 (Siluriformes: Diplomystidae) in coastal river basins of Chile and its implications for conservation Carlos P. Muñoz-Ramírez1,2, Raul Briones3, Nicole Colin4, Correspondence: Pablo Fierro5, Konrad Górski2,5, Alfonso Jara6 and Carlos P. Muñoz-Ramírez 6 [email protected] Aliro Manosalva The ancient catfish family Diplomystidae, with seven species endemic to rivers of southern South America, represents one of the oldest branches of the diverse order Siluriformes. With most species endangered, new reports of these species become extremely valuable for conservation. Currently, it is assumed that Diplomystes species inhabit only Andean (large) basins, and that they are extinct from coastal (small) basins from which their presence have not been recorded since 1919. Here, we document new records of the family Diplomystidae in the Laraquete and Carampangue basins, two coastal basins from the Nahuelbuta Coast Range, Chile, with no previous reports. This finding represents the rediscovery of the genus in coastal basins in more than a Century. Based on analysis of mitochondrial DNA sequences, the collected specimens were found to be closely related to Diplomystes nahuelbutaensis from the Andean Biobío Basin, but sufficiently differentiated to suggest that coastal basin populations are a different management unit. These populations are important because, contrary to previous thoughts, they prove these catfish can survive in small river networks, providing unique opportunities for research and conservation. The conservation category of Critically Endangered (CE) is recommended for the Submitted July 26, 2019 populations from the Laraquete and Carampangue basins. -
Fuzzy Logic-Based Expert System for Native Fish Habitat Assessment in a Scarcity Information Context
Ecohydrology of Surface and Groundwater Dependent Systems: Concepts, Methods and Recent Developments 77 (Proc. of JS.1 at the Joint IAHS & IAH Convention, Hyderabad, India, September 2009). IAHS Publ. 328, 2009. Fuzzy logic-based expert system for native fish habitat assessment in a scarcity information context R. I. MEZA & H. X. VARGAS Civil Engineering Department, Water Resources and Environmental Division, University of Chile, Av. Blanco Encalada #2002, 3º piso, Santiago, Chile [email protected] Abstract Expert systems are typically developed to solve unclear application fields or problems. Such is the case for Chilean river ecosystems, and their fish fauna. In Chile, fish fauna studies are led almost exclusively by biologists, but no or little information is available about reproductive season, fertility, reproductive strategies, age, locomotive capacity, migration, trophic dynamic or niche, to name a few. Quantitative studies are required to analyse the impact of exotic over native species and the antropic effect over a population’s decrease. This information is essential to take appropriate conservation measures for each species and aquatic system. On the other hand, the lack of an adequate hydrometric network forces the use of complementary tools that introduce uncertainties, which are expensive and of difficult quantification. Due to the absence of gauged data for the study area, an expert system application methodology was coupled to the hydrological and hydraulic models, GR4J and HEC-RAS, respectively. Fish species information was taken from biological studies performed for the basin of the Bio Bio River where 17 fish species (13 native and 4 exotic, were found); furthermore, 7 species are classified as vulnerable and 7 are endangered. -
Biodiversidad Final.Pmd
Gayana 70(1): 100-113, 2006 ISSN 0717-652X ESTADO DE CONOCIMIENTO DE LOS PECES DULCEACUICOLAS DE CHILE CURRENT STATE OF KNOWLEDGE OF FRESHWATER FISHES OF CHILE Evelyn Habit1, Brian Dyer2 & Irma Vila3 1Unidad de Sistemas Acuáticos, Centro de Ciencias Ambientales EULA-Chile, Universidad de Concepción, Casilla 160-C, Concepción, Chile. [email protected] 2Escuela de Recursos Naturales, Universidad del Mar, Amunátegui 1838, Recreo, Viña del Mar, Chile. [email protected] 3Laboratorio de Limnología, Depto. Ciencias Ecológicas, Facultad de Ciencias, Universidad de Chile, Santiago, Chile. [email protected] RESUMEN La ictiofauna nativa de los sistemas límnicos de Chile se compone de 11 familias, 17 géneros y alrededor de 44 especies, incluyendo dos lampreas. De éstas, 81% son endémicas de la provincia biogeográfica chilena y 40% se encuentran clasificadas en peligro de extinción. Los grupos más representados corresponden a los órdenes Siluriformes (11 especies), Osmeriformes (9 especies) y Atheriniformes (7 especies). También están representados en Chile los ciclóstomos Petromyzontiformes (2 especies), y los teleósteos Characiformes (4 especies), Cyprinodontiformes (6 especies), Perciformes (4 especies) y Mugilifromes (1). Latitudinalmente, la mayor riqueza de especies ocurre en la zona centro-sur de la provincia Chilena, en tanto que los extremos norte y sur son de baja riqueza específica. Dado su origen, porcentaje de endemismo y retención de caracteres primitivos, este conjunto ictiofaunístico es de alto valor biogeográfico y de conservación. Existen sin embargo importantes vacíos de conocimiento sobre su sistemática, distribución y biología. PALABRAS CLAVES: Peces, sistemas dulceacuícolas, Chile. ABSTRACT The Chilean native freshwater ichthyofauna is composed of 11 families, 17 genera and about 44 species, including two lampreys. -
Amazon Alive: a Decade of Discoveries 1999-2009
Amazon Alive! A decade of discovery 1999-2009 The Amazon is the planet’s largest rainforest and river basin. It supports countless thousands of species, as well as 30 million people. © Brent Stirton / Getty Images / WWF-UK © Brent Stirton / Getty Images The Amazon is the largest rainforest on Earth. It’s famed for its unrivalled biological diversity, with wildlife that includes jaguars, river dolphins, manatees, giant otters, capybaras, harpy eagles, anacondas and piranhas. The many unique habitats in this globally significant region conceal a wealth of hidden species, which scientists continue to discover at an incredible rate. Between 1999 and 2009, at least 1,200 new species of plants and vertebrates have been discovered in the Amazon biome (see page 6 for a map showing the extent of the region that this spans). The new species include 637 plants, 257 fish, 216 amphibians, 55 reptiles, 16 birds and 39 mammals. In addition, thousands of new invertebrate species have been uncovered. Owing to the sheer number of the latter, these are not covered in detail by this report. This report has tried to be comprehensive in its listing of new plants and vertebrates described from the Amazon biome in the last decade. But for the largest groups of life on Earth, such as invertebrates, such lists do not exist – so the number of new species presented here is no doubt an underestimate. Cover image: Ranitomeya benedicta, new poison frog species © Evan Twomey amazon alive! i a decade of discovery 1999-2009 1 Ahmed Djoghlaf, Executive Secretary, Foreword Convention on Biological Diversity The vital importance of the Amazon rainforest is very basic work on the natural history of the well known. -
Amazon Alive!
Amazon Alive! A decade of discovery 1999-2009 The Amazon is the planet’s largest rainforest and river basin. It supports countless thousands of species, as well as 30 million people. © Brent Stirton / Getty Images / WWF-UK © Brent Stirton / Getty Images The Amazon is the largest rainforest on Earth. It’s famed for its unrivalled biological diversity, with wildlife that includes jaguars, river dolphins, manatees, giant otters, capybaras, harpy eagles, anacondas and piranhas. The many unique habitats in this globally significant region conceal a wealth of hidden species, which scientists continue to discover at an incredible rate. Between 1999 and 2009, at least 1,200 new species of plants and vertebrates have been discovered in the Amazon biome (see page 6 for a map showing the extent of the region that this spans). The new species include 637 plants, 257 fish, 216 amphibians, 55 reptiles, 16 birds and 39 mammals. In addition, thousands of new invertebrate species have been uncovered. Owing to the sheer number of the latter, these are not covered in detail by this report. This report has tried to be comprehensive in its listing of new plants and vertebrates described from the Amazon biome in the last decade. But for the largest groups of life on Earth, such as invertebrates, such lists do not exist – so the number of new species presented here is no doubt an underestimate. Cover image: Ranitomeya benedicta, new poison frog species © Evan Twomey amazon alive! i a decade of discovery 1999-2009 1 Ahmed Djoghlaf, Executive Secretary, Foreword Convention on Biological Diversity The vital importance of the Amazon rainforest is very basic work on the natural history of the well known. -
A New Species of Ammoglanis (Siluriformes: Trichomycteridae) from Venezuela
~ 255 Ichthyol. Explor. Freshwaters, Vol. 11, No.3, pp. 255-264,6 figs., 1 tab., November 2000 @2000byVerlagDr. Friedrich Pfeil, MiincheD, Germany - ISSN 0936-9902 A new species of Ammoglanis (Siluriformes: Trichomycteridae) from Venezuela Mario c. C. de Pinna* and Kirk O. Winemiller** A new miniaturized species of the trichomycterid genus Ammoglanisis described from the Rio Orinoco basin in Venezuela. It is distinguished from its only congener, A. diaphanus,by: a banded color pattern formed by internal chromatophores; 5 or 6 pectoral-fin rays (7 in A. diaphanus),5/5 principal caudal-fin rays (6/6 in A. diaphanus),ii+6 dorsal-fin rays (iii+6+i in A. diaphanus),30 or 31 vertebrae (33 in A. diaphanus),six or seven branchiostegal rays (five in A. diaphanus),subterminal mouth (inferior in A. diaphanus)and by the lack of premaxillary and dentary teeth. The two speciesalso differ markedly in a number of internal anatomical traits. Synapomorphies are offered to support the monophyly of the two species now included in Ammoglanis,as well as autapomorphies for each of them. Ammoglanispulex is among the smallest known vertebrates, the largest known specimen being 14.9 mm SL. It is a fossorial inhabitant of shallow sandy sections of clear- and light blackwater streams, and probably feeds on interstitial microinvertebrates. Introduction they have often beensuperficially mis-identified ~ as juveniles of other fish. Miniaturization is a frequent phenomenon in the Miniature species are particularly abundant evolution of neotropical freshwater fishes, and it in the catfish family Trichomycteridae, and ex- seems to have occurred independently numer- pectedly there appears to be more undescribed ous times in that biogeographical region (Weitz- taxa in that group than in most other neotropical man & Vari, 1988). -
Systematic Index 881 SYSTEMATIC INDEX
systematic index 881 SYSTEMATIC INDEX Acanthodoras 28, 41, 544, 546-548 Anchoviella sp. 20, 152, 153, 158, 159 Acanthodoras cataphractus 28, 41, 544, 546-548 Ancistrinae 412, 438 ACESTRORHYNCHIDAE 24, 130, 168, 334-337 ANCISTRINI 412, 438 Acestrorhynchus 24, 72, 82, 84, 334-337 Ancistrus 438, 442-449 Acestrorhynchus falcatus 24, 334-336 Ancistrus aff. hoplogenys 26, 443-446 Acestrorhynchus guianensis 336 Ancistrus gr. leucostictus 26, 443, 446, 447 Acestrorhynchus microlepis 24, 82, 84, 334, 336, Ancistrus sp. ‘reticulate’ 26, 443, 446, 447 337 Ancistrus temminckii 26, 443, 448, 449 ACHIRIDAE 33, 77, 123, 794-799 Anostomidae 21, 33, 50, 131, 168, 184-201, 202 Achirus 4, 33, 794, 796, 797 Anostomus 131, 184, 185, 188-191 Achirus achirus 4, 33, 794, 796, 797 Anostomus anostomus 21, 185, 188, 189 Achirus declivis 33, 794, 796 Anostomus brevior 21, 185, 188, 189 Achirus lineatus 796 Anostomus ternetzi 21, 117, 185, 188-191 Acipenser 5 Aphyocharacidium melandetum 22, 232, 236, 237 Acnodon 23, 48, 288-292 APHYOCHARACINAE 23, 132, 304, 305 Acnodon oligacanthus 23, 48, 289-292 Aphyocharax erythrurus 23, 132, 304, 305 ACTINOPTERYGII 8 Apionichthys dumerili 33, 794, 796-798 Adontosternarchus 602 Apistogramma 720, 723, 728-731, 756 Aequidens 31, 724, 726-729, 750, 752 Apistogramma ortmanni 31, 723, 728-730 Aequidens geayi 750 Apistogramma steindachneri 31, 41, 69, 79, 723, Aequidens paloemeuensis 31, 724, 726, 727 730, 731 Aequidens potaroensis 726 apteronotidae 29, 124, 602-607 Aequidens tetramerus 31, 724, 728, 729 Apteronotus albifrons 4, 29,