Applications of Endophytic Actinomycetes and Their Role in Protection

Total Page:16

File Type:pdf, Size:1020Kb

Applications of Endophytic Actinomycetes and Their Role in Protection Imperial Journal of Interdisciplinary Research (IJIR) Vol-2, Issue-7, 2016 ISSN: 2454-1362, http://www.onlinejournal.in Applications of Endophytic Actinomycetes and Their Role in Protection *Sayeed Ahmad1, Syed Salman Abbas1, Ravi Prakash1 Aftab Alam1 & Mohammad Ajmal Husain1. 1Department of Bioengineering, Faculty of Engineering, Integral University Lucknow, Uttar Pradesh, India-226026 Abstract: Actinomycetes are one of the most the knowledge concerning the pathway of lignin striking sources of antibiotics and other degradation by white root basidiomycetes, biologically dynamic substances of high viable phnerochateschryo-sosporium. Where it is a value. It account approximately for two-thirds of complex secondary metabolic procees mediated by the total known antibiotics isolated from these the action of several extra-cellular enzyme gram positive, branched spores bearing followed by lactase and manganese peroxidase filamentous group of Eubacteria with notorious (Adhi, T. P., et al 1987) were the first group to bacto-fungoid morphology. Among the identify and characterize LiP from actinomycetes. actinomycetes, Streptomyces spp. has been the Actinomycetes are less abundant in water logged most profuse sources of all types of antibiotics. and acidic soils, and may be present in higher than Screening and isolation of capable strains of normal numbers in drier, alkaline soils. Although actinomycetes with prospective antibiotics is still a they are classified as bacteria, they are fungus like thrust area of research and it is recommended that in appearance and growth. Whereas most bacteria the explorations of resources from new areas and grow by asexual fission of individual cells, the habitat have a key role to play in the search for vegetative cells of most actinomycetes produce novel microbes and fresh metabolites and is vital to slender, branchedfilaments, or hyphae that are offset the threats posed by the fast rising collectively termed mycelia. These structures are occurrence of antibiotic resistance. Counting the smaller and of a different morphology and endophytic actinomycetes in the race of investigate composition than their fungal counterparts. Within along the actinomycetes, endophytes have been these hyphae forms asexual spores called conidia; established to improve and promote growth of the spores are formed when conditions are no swarm plants as well as to decrease disease longer optimal for vegetative growth, and symptoms caused by plant pathogens and/or germinate when conditions are again favourable. various environmental stresses. The low stress Actinomycetes are heterotrophic, and are valuable tolerance of axenic plants is normally believed to decomposers of organic matter in soil communities. result partially from the deficiency of endophytic Members of the Streptomycetes family of actinomycetes. Not only to the plants; they even actinomycetes, which includes Streptomyces, are produces abundant bioactive compounds which are responsible for production of the compound of human being benefit. causing the musty odour prominent in freshly turned soils; many also produce antibiotics that Keywords: Endophytic actinomycetes, Bioactive inhibit the growth of bacteria and fungi compounds, Morphology, Characterization, (Alexander,1977; Locci, 1989). They are defined to Bioremediation. be organism producing extensively primary or substrate mycelium as well as more or less INTRODUCTION abundant secondary or aerial mycelium. In the The diversity analysis of the actinomycetes is well course of the Streptomycetes life cycle the hyphae recognized, due to the sustained generation of are partially transformed into chain of spores which environment isolates for pharmaceutical screening are often called as conidia or arthrospore. During and much interest was given to this group of the same period studied on the chemical organism over the year for obtaining antibiotic composition of the cell wall began helped to compound. Beside antibiotic production, another classify the actinomycetes(Becker et al., 1964, important trait of actinomycetes that has been 1965; Lechevalier and Lechevalier, 1970) they studied is their ability to degrade lignin- the most clearly demonstrated that Streptomyces and other complex bipolar. Biodegradation of lignin has been genera contained LL-diaminopimelic acid (LL- considered as significant phenomenons since it A2pm) in its peptidoglycan where as meso-A3pm play a critical role in the carbon cycling. Most of exists in the other actinomycetes. Member of the Imperial Journal of Interdisciplinary Research (IJIR) Page 854 Imperial Journal of Interdisciplinary Research (IJIR) Vol-2, Issue-7, 2016 ISSN: 2454-1362, http://www.onlinejournal.in Streptomycetes are now primarily recognized by Taxanomy of genus Actinomycetes the structure of their peptidoglycan. Peptidoglycan About a decade ago a genus called actinomycetes is of type A3γ containing an inter peptide bridge was shaped it clearly separated from the other composed of a glycine residue (Schliefer and genera so before study about streptomycetes in Kandler, 1972). Further taxonomist also have general. The actinomycetes are a numerous and studied biochemical characters such as pattern of widely distribution group of soil microorganism, sugar in the whole cell hydrolysates(Lechevalier composing of 10 to 50% of the soil and Lechevalier, 1970), phospholipids (Lechevalier mirofloracommunity over a broad range of soil et al., 1970), fatty acids (Kroppenstedt, condition, with streptomyces the numerically 1985),menaquinone(Alderson et al., Kroppenstedt, dominant genus (Alexander, 1977). In taxonomy, a 1985) etc. Beside their importance in the medical large amount awareness has been given recently to microbiology now the scientist are switching over the base composition of deoxyribonucleic acids to the roots where they are looking for the other (DNA) of various organisms. Actinomycetes as a properties specially related to agriculture .From last whole, form homogenous group with high G+C three decades the people are working in many ratio (65.5 to 74%). Some applied field where they are reporting other thermophilicActinomycetes have lower ratio (44 to features such as, ability to bio degrade, plant 53%). Much of this information has reviewed by growth promoting activities etc. Most soil Hill. In the recent taxonomic Actinomycetes in actinomycetes also behave as neutrophiles in Berger’s Manual of systematic bacteriology (2nd culture, growing between pH5.0 and 9.0 with an edition).Actinomycetes are included under volume optimum close to neutrality. As many soils are 4rth published in 2007. (George M.Garrity, Editor- acidic Ph is clearly a major factor determining their in-Chief springer, 2001, New York). According to distribution and activity; it has been known for this approach the G+C gram positive bacteria are many years that acidic soil yield low count of classified under class-Actinobacteria of phylum neutrophilic actinomycetes (Waksman, Actinobacteria. This phylum includes five 1959).However acidophilic and acido duric subclasses, six order, fourteen suborder, thirty nine streptomycetes, the former growing between about families streptomycetaceae of Actinomycetes, pH (Williams et al ;) and to produce diastases and which includes streptomyces are responsible for chitinase with pH optima lower than those of production of the compound causing the musty enzyme from neutrophiles. The presence of low odour well-known in freshly tuned soil many number of neutrophilicstreptomycetes may be due produce antibiotics that restrain the growth of to the localized occurrence of less acidic micro bacteria and fungi (Alexander,1977; Locci 1989). sites and to the resistance of their spores to acidity. When chitin or dead fungal mycelium were added Characterization of Endophytic Actinomycetes to a badly buffered acidic soil, a succession from Morphological characterization. acidophiles to neutrophiles occurred that paralleled Although actinomycetes are classified as bacteria, ammonification and the consequent rise in pH. they are fungus like in appearance and growth. Whereas most bacteria grow by asexual fission of Identification of actinomycetes individual cell, the vegetative cells of most The following points may help in identifying the actinomycetes produce slender, branched filaments, actinomycetes on dilution plates: or hyphae that are collectively mycelia. These 1. Most the actinomycetes contain colonies structures are smaller and of a different of whites gray or black powdery surface morphology and composition than their whereas bacterial colonies are of different counterparts. Its hyphae structure asexual spore colors shiny surface and gummy called conidia; the spore are formed when appearance. condition no longer optimal for vegetative growth, and germinate when condition favourable. Thus by 2. Generally bacteria have lens or lemon morphology of aerial and vegetative mycelia shaped colonies with very thin surface. actinomycetes can characterized. 3. Mostly the actinomycetes colonies can be Microscopic Characterization observed without microscope and have a Aerial mycelium including the chain of distinct hollow with a darker interior spores (arthrospore /conidiospore)- while bacteria do not. The arthrospore although by definition vegetative mycelium on solid medium is not 4. Actinomycetes colonies are firmer than fragmented .In some of the bacteria when picked with a sharp needle. Streptomycetesformation of the spore chain at the edge of the mycelium growth can be observed.
Recommended publications
  • Study of Actinobacteria and Their Secondary Metabolites from Various Habitats in Indonesia and Deep-Sea of the North Atlantic Ocean
    Study of Actinobacteria and their Secondary Metabolites from Various Habitats in Indonesia and Deep-Sea of the North Atlantic Ocean Von der Fakultät für Lebenswissenschaften der Technischen Universität Carolo-Wilhelmina zu Braunschweig zur Erlangung des Grades eines Doktors der Naturwissenschaften (Dr. rer. nat.) genehmigte D i s s e r t a t i o n von Chandra Risdian aus Jakarta / Indonesien 1. Referent: Professor Dr. Michael Steinert 2. Referent: Privatdozent Dr. Joachim M. Wink eingereicht am: 18.12.2019 mündliche Prüfung (Disputation) am: 04.03.2020 Druckjahr 2020 ii Vorveröffentlichungen der Dissertation Teilergebnisse aus dieser Arbeit wurden mit Genehmigung der Fakultät für Lebenswissenschaften, vertreten durch den Mentor der Arbeit, in folgenden Beiträgen vorab veröffentlicht: Publikationen Risdian C, Primahana G, Mozef T, Dewi RT, Ratnakomala S, Lisdiyanti P, and Wink J. Screening of antimicrobial producing Actinobacteria from Enggano Island, Indonesia. AIP Conf Proc 2024(1):020039 (2018). Risdian C, Mozef T, and Wink J. Biosynthesis of polyketides in Streptomyces. Microorganisms 7(5):124 (2019) Posterbeiträge Risdian C, Mozef T, Dewi RT, Primahana G, Lisdiyanti P, Ratnakomala S, Sudarman E, Steinert M, and Wink J. Isolation, characterization, and screening of antibiotic producing Streptomyces spp. collected from soil of Enggano Island, Indonesia. The 7th HIPS Symposium, Saarbrücken, Germany (2017). Risdian C, Ratnakomala S, Lisdiyanti P, Mozef T, and Wink J. Multilocus sequence analysis of Streptomyces sp. SHP 1-2 and related species for phylogenetic and taxonomic studies. The HIPS Symposium, Saarbrücken, Germany (2019). iii Acknowledgements Acknowledgements First and foremost I would like to express my deep gratitude to my mentor PD Dr.
    [Show full text]
  • Mary Josephine Punithaet Al, J. Global Trends Pharm Sci, 2017; 8(4)
    Mary Josephine Punitha et al, J. Global Trends Pharm Sci, 2017; 8(4): 4342 - 4354 An Elsevier Indexed Journal ISSN-2230-7346 Journal of Global Trends in Pharmaceutical Sciences BIOCHEMICAL AND MOLECULAR CHARACTERIZATION OF ACTINOMYCETES ISOLATED FROM MARINE SOIL SAMPLE OF KANYAKUMARI COAST C. Johny1, S. Jeeva2, and S. Mary Josephine Punitha3* 1Research Scholar, Centre for Marine Science and Technology, Manonmaniam Sundaranar University, Rajakkamangalam, Kanyakumari District, Tamil Nadu, India, 2Asst. Professor, Department of Microbiology, Udaya College of Arts and Science, Vellamodi, Kanyakumari District, Tamil Nadu, India, 3*Associate Professor, Centre for Marine Science and Technology, Manonmaniam Sundaranar University, Rajakkamangalam, Kanyakumari District, Tamil Nadu, India, *Corresponding author E-mail: [email protected] ARTICLE INFO ABSTRACT The main focus of this study was to isolate and identify the predominant Key Words actinomycetes from coastal area of Kanyakumari, Tamilnadu by cultural, microscopic, biochemical characterization and by 16S rDNA sequencing. About 16S rDNA sequencing, 52 actinomycete colonies were isolated by systematic serial dilution and plating Streptomyces sp, technique and the size, shape and margin of the two selected predominant Nocardiopsis actinomycete colonies were observed on starch casein agar after 7 to 14 days of dassonvillei, accession incubation. Based on experimental studies and genetic DNA sequence analysis, numbers, EMBL it was concluded that present strains A1 and A2 were identified as Streptomyces sp. and Nocardiopsis dassonvillei respectively and the 16s rRNA sequences of A1 and A2 were submitted to GenBank under accession numbers KU174216 and AB896798. The strains were submitted as Streptomyces sp. N56 and Nocardiopsis dassonvillei and the data are simultaneously made available to EMBL in Europe and the DNA Data Bank of Japan.
    [Show full text]
  • Streptosporangium Roseum Type Strain (NI 9100T)
    Lawrence Berkeley National Laboratory Recent Work Title Complete genome sequence of Streptosporangium roseum type strain (NI 9100). Permalink https://escholarship.org/uc/item/7g79w47k Journal Standards in genomic sciences, 2(1) ISSN 1944-3277 Authors Nolan, Matt Sikorski, Johannes Jando, Marlen et al. Publication Date 2010-01-28 DOI 10.4056/sigs.631049 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Standards in Genomic Sciences (2010) 2:29-37 DOI:10.4056/sigs.631049 Complete genome sequence of Streptosporangium T roseum type strain (NI 9100 ) Matt Nolan1, Johannes Sikorski2, Marlen Jando2, Susan Lucas1, Alla Lapidus1, Tijana Glavina Del Rio1, Feng Chen1, Hope Tice1, Sam Pitluck1, Jan-Fang Cheng1, Olga Chertkov1,3, David Sims1,3, Linda Meincke1,3, Thomas Brettin1,3, Cliff Han1,3, John C. Detter1,3, David Bruce1,3, Lynne Goodwin1,3, Miriam Land1,4, Loren Hauser1,4, Yun-Juan Chang1,4, Cynthia D. Jeffries1,4, Natalia Ivanova1, Konstantinos Mavromatis1, Natalia Mikhailova1, Amy Chen5, Krishna Pala- niappan5, Patrick Chain1,3, Manfred Rohde6, Markus Göker2, Jim Bristow1, Jonathan A. Ei- sen1,7, Victor Markowitz5, Philip Hugenholtz1, Nikos C. Kyrpides1, and Hans-Peter Klenk2* 1 DOE Joint Genome Institute, Walnut Creek, California, USA 2 DSMZ – German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany 3 Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA 4 Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA 5 Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA 6 HZI – Helmholtz Centre for Infection Research, Braunschweig, Germany 7 University of California Davis Genome Center, Davis, California, USA *Corresponding author: Hans-Peter Klenk Keywords: sporangia, vegetative and aerial mycelia, aerobic, non-motile, non-motile spores, Gram-positive, Streptosporangiaceae, S.
    [Show full text]
  • ISOLATION of Streptomyces Sp. from LAPINDO MUD SOIL, SIDOARJO, EAST JAVA PROVINCE, INDONESIA AS a LARVICIDE CANDIDATE AGAINST Aedes Aegypti
    Isolation of Streptomyces sp. as a Larvicide Candidate Against Aedes aegypti (Subagyo Yotopranoto et al) ISOLATION OF Streptomyces sp. FROM LAPINDO MUD SOIL, SIDOARJO, EAST JAVA PROVINCE, INDONESIA AS A LARVICIDE CANDIDATE AGAINST Aedes aegypti Subagyo Yotopranoto1,2, Rochmah Kurnijasanti3, Etik Ainun Rohmah2 1Department of Parasitology, Faculty of Medicine, 2Laboratory of Entomology, Institute of Tropical Disease, 3Department of Basic Veterinary Medicine, Faculty of Veterinary Medicine, Universitas Airlangga, Surabaya, Indonesia ABSTRAK Streptomyces sp. adalah suatu bakteri yang dapat hidup di banyak tempat habitat yaitu laut, bunga karang, daerah pantai, tanah, tanah pasir, tepi sungai dan lain-lain. Banyak antibiotika dan metabolit sekunder yang dihasilkan oleh bakeri ini. Beberapa meta- bolit sekunder dari bakteri ini dapat digunakan sebagai insektisida tehadap serangga termasuk larva nyamuk. Tujuan dari penelitian ini adalah untuk mencari dan mengisolasi sampai spesies dari Streptomyces sp. dari tanah lumpur Lapindo Sidoarjo, provinsi Jawa Timur yang dapat digunakan sebagai larvasida terhadap larva Aedes aegypti, vektor penyakit demam berdarah dengue. Metode penelitian ini adalah menumpulkan beberapa sampel tanah lumpur dari Lapindo Sidoarjo. Sampel yang sudah dikoleksi dikultur pada media ISP-4 untuk mendapatkan kultur campuran. Kemudin mengisolasi koloni yang dicurigai sebagai Streptomyces sp.dengan mengkultur beberapa kali lagi pada media ISP-4 pada petri dish. Beberapa isolat yang murni kemudian dikultur pada media ISP-4 miring (slant). Diperoleh delapan isolat murni Streptomyces sp. Karakterisasi 16S sRNA dari Streptomyces sp. dilakukan dalam rangka untuk menentukan spesies. Isolasi DNA dikerjakan dan dilanjutkan dengan sekuensing DNA, kemudian dibandingkan dengan Gene Bank dengan menggunakan program BLAST. Hasilnya menunjukkan bahwa sekuens basa-basa nukleotida Streptomyces Sp-D6 menunjukkan kesamaan yang tinggi dengan Streptomyces sp.
    [Show full text]
  • Thèse Présentée Par : KITOUNI Mahmoud En Vue De L'obtention Du Diplôme De : DOCTORAT D'etat En : MICROBIOLOGIE APPLIQUEE
    République Algérienne Démocratique et Populaire Ministère de l’Enseignement Supérieur et de la Recherche Scientifique Université Mentouri-Constantine Faculté des Sciences de la Nature et de la Vie Département des Sciences de la Nature et de la Vie N ° d’ordreN° : 84 IT.E / 2007 SERIE : 05 ISN / 2007 Thèse présentée par : KITOUNI Mahmoud En vue de l’obtention du Diplôme de : DOCTORAT D’ETAT en : MICROBIOLOGIE APPLIQUEE Intitulée : Isolement de bactéries actinomycétales productrices d’antibiotiques à partir d’écosystèmes extrêmes. Identification moléculaire des souches actives et caractérisation préliminapréliminaireire des substances élaborées Membres du jury : Mr BENGUEDOUAR A. Professeur Président Univ. Mentouri-Constantine Mr BOULAHROUF A. Professeur Directeur de thèse Univ. Mentouri-Constantine Mr BOIRON P. Professeur Examinateur Univ. Lyon 1 Mr KARAM N. Professeur Examinateur Univ. Essania-Oran Mr BELLAHCENE M. Maître de Examinateur Univ. Mostaganem Conférences Mr HADDI M.L. Maître de Examinateur Univ. Mentouri-Constantine Conférences Session 2007 REMERCIEMENTS Ce travail a été réalisé au laboratoire de génie microbiologique et applications de l’Université Mentouri de Constantine. Que Monsieur Abderrahmane Boulahrouf (Professeur à l’Université Mentouri de Constantine) trouve ici l’expression de ma très vive reconnaissance pour avoir accepter la responsabilité de ce travail. Je remercie Monsieur Amar Benguedouar (Professeur à l’Université Mentouri de Constantine) de m’avoir fait l’honneur de présider mon jury de thèse. Mes remerciements vont également à Monsieur Patrick Boiron (Professeur à l’Université Claude Bernard Lyon 1) pour la confiance et l’accueil chaleureux qui ma réservé à Lyon, ses précieux conseils et d’avoir accepté de se déplacer à Constantine pour participer à ce jury.
    [Show full text]
  • Taxonomic Characterization of Streptomyces Strain CH54-4 Isolated from Mangrove Sediment
    Ann Microbiol (2010) 60:299–305 DOI 10.1007/s13213-010-0041-4 ORIGINAL ARTICLE Taxonomic characterization of Streptomyces strain CH54-4 isolated from mangrove sediment Rattanaporn Srivibool & Kanpicha Jaidee & Morakot Sukchotiratana & Shinji Tokuyama & Wasu Pathom-aree Received: 19 January 2010 /Accepted: 9 March 2010 /Published online: 15 April 2010 # Springer-Verlag and the University of Milan 2010 Abstract An actinobacterium, designated as strain CH54-4, wall chemotype I with no characteristic sugar, and type II was isolated from mangrove sediment on the east coast of the polar lipids that typically contain diphosphatidyl glycerol, Gulf of Thailand using starch casein agar. This isolate was phosphatidylinositol, phosphatidylethanolamine, and phos- found to contain chemical markers typical of members of the phatidylinositol mannoside. Members of the genus Strepto- genus Streptomyces: This strain possessed a broad spectrum myces are widely distributed in soils and played important of antimicrobial activity against Gram-positive, Gram- role in soil ecology (Goodfellow and Williams 1983). They negative bacteria and fungi. In addition, this strain also are prolific sources of secondary metabolites, notably showed strong activity against breast cancer cells with an antibiotics (Lazzarini et al. 2000). −1 IC50 value of 2.91 µg ml . Phylogenetic analysis of a 16S The search and discovery of novel microbes for new rRNA gene sequence showed that strain CH54-4 forms a secondary metabolites is significant in the fight against distinct clade within the Streptomyces 16S rRNA gene tree antibiotic resistant pathogens (Bernan et al. 2004) and and closely related to Streptomyces thermocarboxydus. emerging diseases (Taylor et al. 2001). One strategy is to isolate novel actinomycetes from poorly studied habitats to Keywords Mangrove sediment .
    [Show full text]
  • Diversity and Antimicrobial Activity of Culturable Endophytic Actinobacteria Associated with Acanthaceae Plants
    R ESEARCH ARTICLE doi: 10.2306/scienceasia1513-1874.2020.036 Diversity and antimicrobial activity of culturable endophytic actinobacteria associated with Acanthaceae plants a,b, c a Wongsakorn Phongsopitanun ∗, Paranee Sripreechasak , Kanokorn Rueangsawang , Rungpech Panyawuta, Pattama Pittayakhajonwutd, Somboon Tanasupawatb a Department of Biology, Faculty of Science, Ramkhamhaeng University, Bangkok 10240 Thailand b Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330 Thailand c Department of Biotechnology, Faculty of Science, Burapha University, Chonburi 20131 Thailand d National Center for Genetic Engineering and Biotechnology (BIOTEC), Thailand Science Park, Pathumthani 12120 Thailand ∗Corresponding author, e-mail: [email protected] Received 20 Oct 2019 Accepted 20 Apr 2020 ABSTRACT: In this study, a total of 52 endophytic actinobacteria were isolated from 6 species of Acanthaceae plants collected in Thailand. Most actinobacteria were obtained from the root part. Based on 16S rRNA gene analysis and phylogenetic tree, these actinobacteria were classified into 4 families (Nocardiaceae, Micromonosporaceae, Streptosporangiaceae and Streptomycetaceae) and 6 genera including Actinomycetospora (1 isolate), Dactylosporangium (1 isolate), Nocardia (3 isolates), Microbispora (5 isolates), Micromonospora (10 isolates) and Streptomyces (32 isolates). The result of antimicrobial activity screening indicated that 8 isolates, including 1 Actinomycetospora and 7 Streptomyces,
    [Show full text]
  • ACTINOMYCETES IMPACTS on DROUGHT STRESS in MAIZE (Zea Mays L.)
    ACTINOMYCETES IMPACTS ON DROUGHT STRESS IN MAIZE (Zea Mays L.). M06007067'4 A dissertation submitted under the Department of Biological Sciences to the North-West University (Mafikeng Campus), in fulfillmentof the requirement for the Degree: Master of Science in Biological Sciences (Microbiology) By CHINENYENWA FORTUNE CHUKWUNEME (25540122) E) orcid.org!0000-0002-3995-208X Supervisor: Prof. Olubukola 0. Babalola LIBRARY MAFIKENG CAMPUS Co-Supervisor: Prof. Funso R. Kutu CALL NO.: 2018 -11- 1 4 March,2018 loCC.NO.: NORTH-WEST UNIVERSITY DECLARATION l declare that this dissertation titled "Actinomyccetes impacts on drought stress in maize (Zea mays L.)", is a true outcome of the research performed by me at the department of Biological Sciences, North-West University (Mafikeng Campus) under the supervision of Prof. Olubukola 0. Babalola and Prof. Funso R. Kutu. I declare that the work has not been previously submitted by me for a degree at this or any other University, and that a ll information derived from the literature has been duly acknowledged in the text and a list of references provided. STUDENT'S NAME CHINENYENWA FORTUNE CHUKWUNEME SIGNATURE. ~ ... DATE .................13- o-t;-~~..................... .. CO-SUPERVISOR'S NAME PROFESSOR FUNSO RAPHAEL KUTU SIGNATURE .............................. DATE ...................................... .. SUPERVISOR'S NAME PROFESSOR OLU OLA OLURANTI BABALOLA SIGNATURE ...... .__~_,........ ._.. DA TE .....L 3 .-::: .O.~ :-:-..l. DEDICATION This work is dedicated to Almighty God for His faithfulness, Unfailing Love and mercy upon my life. II ACKNOWLEDGEMENTS I am highly indebted to my maker for life, strength, wisdom and grace to carry out this project. My sincere gratitude goes to my Supervisor, Professor Olubukola Oluranti Babalola and my co­ supervisor, Professor Funso Raphael Kutu for standing by me and for their continuous guidance, tolerance and encouragement through the period of this research.
    [Show full text]
  • Streptomyces for Sustainability 12 Patricia Vaz Jauri , Nora Altier , and Linda L
    Streptomyces for Sustainability 12 Patricia Vaz Jauri , Nora Altier , and Linda L. Kinkel Abstract Streptomyces is a genus of gram-positive bacteria with a mycelial growth habit and the ability to produce spores. Due to their unparalleled ability to produce antibiotics, most of the early research carried out on Streptomyces was antibiotic discovery-driven, with over two thirds of antibiotics used for medical purposes originally isolated from Streptomyces . However, their ubiquity, high capacity of adaptation to different niches and rich secondary metabolite production, make them an invaluable source of solutions in diverse human activities, including medicine, agriculture, industry and toxic waste remotion. In addition to the abil- ity to culture and produce Streptomyces and Streptomyces -derived metabolites, knowledge on how to manipulate natural populations of Streptomyces will likely improve our ability to make environmentally sustainable decisions. 12.1 Introduction The Streptomyces are a large and diverse group of microorganisms that have long captured the attention of researchers. They have been studied for diverse reasons, including their unique morphology; their apparently endless source of secondary metabolites, especially antibiotics and other chemicals for medical use; their patho- genicity; and their symbiotic associations with other organisms, including insects and plants. There is substantial literature on Streptomyces , and, overall, research on P. V. Jauri (*) • N. Altier Plataforma de Bioinsumos , INIA-Las Brujas , Canelones , Uruguay e-mail: [email protected] L. L. Kinkel Department of Plant Pathology , University of Minnesota , Minneapolis , MN , USA © Springer Science+Business Media Singapore 2016 251 S. Castro-Sowinski (ed.), Microbial Models: From Environmental to Industrial Sustainability, Microorganisms for Sustainability 1, DOI 10.1007/978-981-10-2555-6_12 252 P.V.
    [Show full text]
  • Rhizosphere Streptomyces Formulas As the Biological Control Agent of Phytopathogenic Fungi Fusarium Oxysporum and Plant Growth Promoter of Soybean
    BIODIVERSITAS ISSN: 1412-033X Volume 22, Number 6, June 2021 E-ISSN: 2085-4722 Pages: 3015-3023 DOI: 10.13057/biodiv/d220602 Rhizosphere Streptomyces formulas as the biological control agent of phytopathogenic fungi Fusarium oxysporum and plant growth promoter of soybean MAYA SARI1, ABDJAD ASIH NAWANGSIH2, ARIS TRI WAHYUDI1,♥ 1Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Agatis, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia. Tel./fax.: +62-251-8622833, email: [email protected] 2Department of Plant Protection, Faculty of Agriculture, Institut Pertanian Bogor. Jl. Meranti, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia Manuscript received: 3 April 2021. Revision accepted: 2 May 2021. Abstract. Sari M, Nawangsih AA, Wahyudi AT. 2021. Rhizosphere Streptomyces formulas as the biological control agent of phytopathogenic fungi Fusarium oxysporum and plant growth promoter of soybean. Biodiversitas 22: 3015-3023. Rhizosphere Streptomyces are considered as promising sources of plant growth-promoting rhizobacteria (PGPR) and biocontrol agents against pathogenic fungi, particularly Fusarium oxysporum causing root rot, cotyledon rot, hypocotyl rot, and stunted growth in soybean. Formulation of rhizosphere Streptomyces with appropriate carrier materials is necessary to facilitate storage and application in plants. This study aimed to develop a formulation of rhizosphere Streptomyces, apply the formula to control F. oxysporum, and promote soybean plant growth. Five Streptomyces isolates, i.e., Streptomyces panaciradicis ARK 13, Streptomyces tritolerans ARK 17, Streptomyces recifensis ARK 63, Streptomyces tendae ARK 91, and Streptomyces manipurensis ARK 94 were used in this study. All of the isolates could grow in potato broth, rice bran extract, and molasses as alternative media.
    [Show full text]
  • ISOLATION of Streptomyces Sp. from LAPINDO MUD SOIL, SIDOARJO, EAST JAVA PROVINCE, INDONESIA AS a LARVICIDE CANDIDATE AGAINST Aedes Aegypti
    Isolation of Streptomyces sp. as a Larvicide Candidate Against Aedes aegypti (Subagyo Yotopranoto et al) ISOLATION OF Streptomyces sp. FROM LAPINDO MUD SOIL, SIDOARJO, EAST JAVA PROVINCE, INDONESIA AS A LARVICIDE CANDIDATE AGAINST Aedes aegypti Subagyo Yotopranoto1,2, Rochmah Kurnijasanti3, Etik Ainun Rohmah2 1Department of Parasitology, Faculty of Medicine, 2Laboratory of Entomology, Institute of Tropical Disease, 3Department of Basic Veterinary Medicine, Faculty of Veterinary Medicine, Universitas Airlangga, Surabaya, Indonesia ABSTRAK Streptomyces sp. adalah suatu bakteri yang dapat hidup di banyak tempat habitat yaitu laut, bunga karang, daerah pantai, tanah, tanah pasir, tepi sungai dan lain-lain. Banyak antibiotika dan metabolit sekunder yang dihasilkan oleh bakeri ini. Beberapa meta- bolit sekunder dari bakteri ini dapat digunakan sebagai insektisida tehadap serangga termasuk larva nyamuk. Tujuan dari penelitian ini adalah untuk mencari dan mengisolasi sampai spesies dari Streptomyces sp. dari tanah lumpur Lapindo Sidoarjo, provinsi Jawa Timur yang dapat digunakan sebagai larvasida terhadap larva Aedes aegypti, vektor penyakit demam berdarah dengue. Metode penelitian ini adalah menumpulkan beberapa sampel tanah lumpur dari Lapindo Sidoarjo. Sampel yang sudah dikoleksi dikultur pada media ISP-4 untuk mendapatkan kultur campuran. Kemudin mengisolasi koloni yang dicurigai sebagai Streptomyces sp.dengan mengkultur beberapa kali lagi pada media ISP-4 pada petri dish. Beberapa isolat yang murni kemudian dikultur pada media ISP-4 miring (slant). Diperoleh delapan isolat murni Streptomyces sp. Karakterisasi 16S sRNA dari Streptomyces sp. dilakukan dalam rangka untuk menentukan spesies. Isolasi DNA dikerjakan dan dilanjutkan dengan sekuensing DNA, kemudian dibandingkan dengan Gene Bank dengan menggunakan program BLAST. Hasilnya menunjukkan bahwa sekuens basa-basa nukleotida Streptomyces Sp-D6 menunjukkan kesamaan yang tinggi dengan Streptomyces sp.
    [Show full text]
  • Program Abstract Book
    ABSTRACT BOOK INTERNATIONAL WORKSHOP ON BIOLOGY AND APPLICATIONS OF ACTINOMYCETES On 31st October-1st November 2019 Organized by University of Mysore, Mysore, India In association with Helmholtz Centre for Infection Research & Technical University of Braunschweig, Germany Vijnana Bhawan, University of Mysore Manasagangotri, Mysore ABSTRACT BOOK International Workshop on Biology and Applications of Actinomycetes Organized by UUNNIIVVEERRSSIITTYY OOFF MMYYSSOORREE University of Mysore, Mysore, India In association with Helmholtz Centre for Infection Research & Technical University of Braunschweig, Germany Edited by Dr. Ravishankar Rai. V University of Mysore, Mysore WELCOME MESSAGE _________________________________________________________________________________________ _ It gives me immense pleasure to invite you all to the International Workshop on Biology and Applications of Actinomycetes-2019. It is jointly organized by the University of Mysore, Mysore, Helmholtz Centre for Infection Research, Braunschweig and Technical University of Braunschweig, Germany. This workshop is aimed to bring both young and experienced scientists from all regions of the world to learn advanced techniques on the Diversity, Chemical biology and Ecology of Actinomycetes and the application of modern genomic platforms for the discovery of antibiotics, anti-infectives and anticancer drugs from Actinomycetes. Actinomycetes are one of the extremely diverse groups of filamentous bacteria capable of surviving in a number of ecological niches due to their bioactive potential. After more than half a century of exploitation, it has become increasingly challenging to find novel natural products with useful properties as the same known compounds are often repeatedly re-discovered when using traditional approaches. Modern genome mining approaches have led to the discovery of new biosynthetic gene clusters, thus indicating that Actinomycetes still harbor a huge unexploited potential to produce novel natural products.
    [Show full text]