Relevance of Α-Defensins (HNP1-3) and Defensin Β-1 in Diabetes
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Downregulation of Salivary Proteins, Protective Against Dental Caries, in Type 1 Diabetes
proteomes Article Downregulation of Salivary Proteins, Protective against Dental Caries, in Type 1 Diabetes Eftychia Pappa 1,* , Konstantinos Vougas 2, Jerome Zoidakis 2 , William Papaioannou 3, Christos Rahiotis 1 and Heleni Vastardis 4 1 Department of Operative Dentistry, School of Dentistry, National and Kapodistrian University of Athens, 11527 Athens, Greece; [email protected] 2 Proteomics Laboratory, Biomedical Research Foundation Academy of Athens, 11527 Athens, Greece; [email protected] (K.V.); [email protected] (J.Z.) 3 Department of Preventive and Community Dentistry, School of Dentistry, National and Kapodistrian University of Athens, 11527 Athens, Greece; [email protected] 4 Department of Orthodontics, School of Dentistry, National and Kapodistrian University of Athens, 11527 Athens, Greece; [email protected] * Correspondence: effi[email protected] Abstract: Saliva, an essential oral secretion involved in protecting the oral cavity’s hard and soft tissues, is readily available and straightforward to collect. Recent studies have analyzed the sali- vary proteome in children and adolescents with extensive carious lesions to identify diagnostic and prognostic biomarkers. The current study aimed to investigate saliva’s diagnostic ability through proteomics to detect the potential differential expression of proteins specific for the occurrence of carious lesions. For this study, we performed bioinformatics and functional analysis of proteomic datasets, previously examined by our group, from samples of adolescents with regulated and unreg- ulated type 1 diabetes, as they compare with healthy controls. Among the differentially expressed Citation: Pappa, E.; Vougas, K.; proteins relevant to caries pathology, alpha-amylase 2B, beta-defensin 4A, BPI fold containing family Zoidakis, J.; Papaioannou, W.; Rahiotis, C.; Vastardis, H. -
Enteric Alpha Defensins in Norm and Pathology Nikolai a Lisitsyn1*, Yulia a Bukurova1, Inna G Nikitina1, George S Krasnov1, Yuri Sykulev2 and Sergey F Beresten1
Lisitsyn et al. Annals of Clinical Microbiology and Antimicrobials 2012, 11:1 http://www.ann-clinmicrob.com/content/11/1/1 REVIEW Open Access Enteric alpha defensins in norm and pathology Nikolai A Lisitsyn1*, Yulia A Bukurova1, Inna G Nikitina1, George S Krasnov1, Yuri Sykulev2 and Sergey F Beresten1 Abstract Microbes living in the mammalian gut exist in constant contact with immunity system that prevents infection and maintains homeostasis. Enteric alpha defensins play an important role in regulation of bacterial colonization of the gut, as well as in activation of pro- and anti-inflammatory responses of the adaptive immune system cells in lamina propria. This review summarizes currently available data on functions of mammalian enteric alpha defensins in the immune defense and changes in their secretion in intestinal inflammatory diseases and cancer. Keywords: Enteric alpha defensins, Paneth cells, innate immunity, IBD, colon cancer Introduction hydrophobic structure with a positively charged hydro- Defensins are short, cysteine-rich, cationic peptides philic part) is essential for the insertion into the micro- found in vertebrates, invertebrates and plants, which bial membrane and the formation of a pore leading to play an important role in innate immunity against bac- membrane permeabilization and lysis of the microbe teria, fungi, protozoa, and viruses [1]. Mammalian [10]. Initial recognition of numerous microbial targets is defensins are predominantly expressed in epithelial cells a consequence of electrostatic interactions between the of skin, respiratory airways, gastrointestinal and geni- defensins arginine residues and the negatively charged tourinary tracts, which form physical barriers to external phospholipids of the microbial cytoplasmic membrane infectious agents [2,3], and also in leukocytes (mostly [2,5]. -
LINKING INNATE and ADAPTIVE IMMUNE RESPONSES By
HUMAN β DEFENSIN 3: LINKING INNATE AND ADAPTIVE IMMUNE RESPONSES By: NICHOLAS FUNDERBURG Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Advisors: Michael Lederman, MD. Scott Sieg, PhD. Department of Molecular Biology and Microbiology CASE WESTERN RESERVE UNIVERSITY January 2008 CASE WESTERN RESERVE UNIVERSITY SCHOOL OF GRADUATE STUDIES We hereby approve the dissertation of ______________Nicholas Funderburg_____________________ candidate for the Ph.D. degree *. (signed)_________David McDonald______________________ (chair of the committee) ______________Michael Lederman__________________ ____ _Scott Sieg________________________ ________Aaron Weinberg___________________ Thomas McCormick___ __________ ________________________________________________ (date) _____7-17-07__________________ *We also certify that written approval has been obtained for any proprietary material contained therein. 2 Table of Contents Table of Contents 3 List of Tables 7 List of Figures 8 Acknowledgements 11 Abstract 12 Chapter 1: Introduction 14 Innate Immunity 17 Antimicrobial Activity of Beta Defensins 19 Human Defensins: Structure and Expression 21 Linking Innate and Adaptive Immune Responses 23 HBDs in HIV Infection 25 Summary of Thesis Work 26 Chapter 2: Human β defensin-3 activates professional antigen-presenting cells via Toll-like Receptors 1 and 2 31 Summary 32 Introduction 33 3 Results 35 HBD-3 induces co-stimulatory molecule expression on APC 35 HBD-3 activation of monocytes occurs through the signaling molecules MyD88 and IRAK-1 36 HBD-3 requires expression of TLR1 and 2 for cellular activation 37 Discussion 40 Materials and Methods 43 Reagents 43 Primary cells and culture conditions 44 HEK293 cell transfectants 44 Flow Cytometry 44 Western Blots 45 TLR Ligand Screening 45 Murine macrophage studies 45 CHO Cell experiments 46 Statistical Methods 46 Acknowledgments 47 Chapter 3: Induction of Surface Molecules and Inflammatory Cytokines by HBD-3 and Pam3CSK4 are regulated differentially by the MAP Kinase Pathways. -
Copy Number Variation and Huntington's Disease
UNIVERSIDADE DE LISBOA FACULDADE DE MEDICINA DE LISBOA Copy number variation and Huntington’s disease Angelica Vittori Ramo das Ciências Biomédicas Especialidade – Neurociências Outubro 2013 UNIVERSIDADE DE LISBOA FACULDADE DE MEDICINA DE LISBOA Copy number variation and Huntington’s disease Candidata: Angelica Vittori Orientadores: Prof . Doutor Tiago Fleming Outeiro Doutor Flaviano Giorgini Doutor Edward J. Hollox Ramo das Ciências Biomédicas Especialidade – Neurociências Todas as afirmações efectuadas no presente documento são da exclusiva II responsabilidade do seu autor, não cabendo qualquer responsabilidade à faculdade de medicina de lisboa pelos conteúdos nela apresentados. A impressão são da exclusiva está dissertação foi aprovada pelo Conselho Cientifico da Faculdade de Medicina em reunião de 19 de Novembro de 2013. III Resumo A variação de número de cópias (CNV em inglês) é uma modificação de uma sequência de DNA que apresenta uma inserção ou deleção em comparação com um genoma de referência com um número de cópias de N = 2. Com um comprimento variável, desde 50 pares de bases até várias megabases, as CNVs identificadas têm um tamanho médio de ~ 3 Kb e representam cerca de 4% do genoma humano. As CNVs, como outras variações genéticas, podem afetar directamente os níveis de expressão dos genes afectados. Os efeitos indirectos na expressão genética podem ser causados por alterações da posição, interrompendo o quadro de leitura do gene ou posteriormente, perturbando as redes de regulação genética. Foi demonstrado que as CNVs são em grande parte responsáveis pela evolução humana e diversidade genética entre os indivíduos. A relevância das CNVs no genoma humano foi salientada por vários estudos de associação que mostraram o efeito das CNVs na susceptibilidade a doenças neurodegenerativas, doenças de características complexas, e por serem a principal causa do aparecimento de doenças mendelianas ou por conferirem um fenótipo benigno. -
Paneth Cell Α-Defensins HD-5 and HD-6 Display Differential Degradation Into Active Antimicrobial Fragments
Paneth cell α-defensins HD-5 and HD-6 display differential degradation into active antimicrobial fragments D. Ehmanna, J. Wendlera, L. Koeningera, I. S. Larsenb,c, T. Klaga, J. Bergerd, A. Maretteb,c, M. Schallere, E. F. Stangea, N. P. Maleka, B. A. H. Jensenb,c,f, and J. Wehkampa,1 aInternal Medicine I, University Hospital Tübingen, 72076 Tübingen, Germany; bQuebec Heart and Lung Institute, Department of Medicine, Faculty of Medicine, Cardiology Axis, Laval University, G1V 4G5 Quebec, QC, Canada; cInstitute of Nutrition and Functional Foods, Laval University, G1V 4G5 Quebec, QC, Canada; dElectron Microscopy Unit, Max-Planck-Institute for Developmental Biology, 72076 Tübingen, Germany; eDepartment of Dermatology, University Hospital Tübingen, 72076 Tübingen, Germany; and fNovo Nordisk Foundation Center for Basic Metabolic Research, Section for Metabolic Genomics, Faculty of Health and Medical Sciences, University of Copenhagen, 1165 Copenhagen, Denmark Edited by Lora V. Hooper, The University of Texas Southwestern, Dallas, TX, and approved January 4, 2019 (received for review October 9, 2018) Antimicrobial peptides, in particular α-defensins expressed by Paneth variety of AMPs but most abundantly α-defensin 5 (HD-5) and -6 cells, control microbiota composition and play a key role in intestinal (HD-6) (2, 17, 18). These secretory Paneth cells are located at the barrier function and homeostasis. Dynamic conditions in the local bottom of the crypts of Lieberkühn and are highly controlled by microenvironment, such as pH and redox potential, significantly af- Wnt signaling due to their differentiation and their defensin regu- fect the antimicrobial spectrum. In contrast to oxidized peptides, lation and expression (19–21). -
Bacterial Interactions with Cells of the Intestinal Mucosa: Toll- 1182 Like Receptors and Nod2
Recent advances in basic science BACTERIAL INTERACTIONS WITH CELLS OF THE INTESTINAL MUCOSA: TOLL- 1182 LIKE RECEPTORS AND NOD2 ECario Gut: first published as on 11 July 2005. Downloaded from Gut 2005;54:1182–1193. doi: 10.1136/gut.2004.062794 SUMMARY Toll-like receptors (TLR) and NOD2 are emerging as key mediators of innate host defence in the intestinal mucosa, crucially involved in maintaining mucosal as well as commensal homeostasis. Recent observations suggest new (patho-) physiological mechanisms of how functional versus dysfunctional TLRx/NOD2 pathways may oppose or favour inflammatory bowel disease (IBD). In Published online first 19 April 2005 health, TLRx signalling protects the intestinal epithelial barrier and confers commensal tolerance whereas NOD2 signalling exerts antimicrobial activity and prevents pathogenic invasion. In disease, aberrant TLRx and/or NOD2 signalling may stimulate diverse inflammatory responses leading to acute and chronic intestinal inflammation with many different clinical phenotypes. c INTRODUCTION The intestinal mucosa must rapidly recognise detrimental pathogenic threats to the lumen to initiate controlled immune responses but maintain hyporesponsiveness to omnipresent harmless commensals. Charles Janeway Jr first suggested that so-called pattern recognition receptors (PRRs) may play an essential role in allowing innate immune cells to discriminate between ‘‘self’’ http://gut.bmj.com/ and microbial ‘‘non-self’’ based on the recognition of broadly conserved molecular patterns.1 Toll- like receptors (TLRs) which comprise a class of transmembrane PRRs play a key role in microbial recognition, induction of antimicrobial genes, and the control of adaptive immune responses. NODs (NOD1 and NOD2) are a structurally distinct family of intracellular PRRs which presumably in the context of microbial invasion subserve similar functions (fig 1). -
Alpha Defensin 1 Antibody / DEFA1 (R32739)
Alpha Defensin 1 Antibody / DEFA1 (R32739) Catalog No. Formulation Size R32739 0.5mg/ml if reconstituted with 0.2ml sterile DI water 100 ug Bulk quote request Availability 1-3 business days Species Reactivity Human, Rat Format Antigen affinity purified Clonality Polyclonal (rabbit origin) Isotype Rabbit IgG Purity Antigen affinity Buffer Lyophilized from 1X PBS with 2.5% BSA, 0.025% sodium azide UniProt P59665 Applications Western Blot : 0.5-1ug/ml Limitations This Alpha Defensin 1 antibody is available for research use only. Western blot testing of 1) rat testis and 2) human HeLa lysate with Alpha Defensin 1 antibody at 0.5ug/ml. Predicted molecular weight ~10 kDa. Description Defensin, alpha 1, also known as human alpha defensin 1, human neutrophil peptide 1 (HNP-1) or neutrophil defensin 1 is a human protein that is encoded by the DEFA1 gene. Defensins are a family of antimicrobial and cytotoxic peptides thought to be involved in host defense. They are abundant in the granules of neutrophils and also found in the epithelia of mucosal surfaces such as those of the intestine, respiratory tract, urinary tract, and vagina. Members of the defensin family are highly similar in protein sequence and distinguished by a conserved cysteine motif. The protein encoded by this gene, defensin, alpha 1, is found in the microbicidal granules of neutrophils and likely plays a role in phagocyte-mediated host defense. Several alpha defensin genes are clustered on chromosome 8. This gene differs from defensin, alpha 3 by only one amino acid. This gene and the gene encoding defensin, alpha 3 are both subject to copy number variation. -
DEFA1 Rabbit Pab
Leader in Biomolecular Solutions for Life Science DEFA1 Rabbit pAb Catalog No.: A6897 Basic Information Background Catalog No. Defensins are a family of antimicrobial and cytotoxic peptides thought to be involved in host A6897 defense. They are abundant in the granules of neutrophils and also found in the epithelia of mucosal surfaces such as those of the intestine, respiratory tract, urinary tract, and vagina. Observed MW Members of the defensin family are highly similar in protein sequence and distinguished by a 10KDa conserved cysteine motif. The protein encoded by this gene, defensin, alpha 1, is found in the microbicidal granules of neutrophils and likely plays a role in phagocyte-mediated host defense. Several alpha defensin genes are clustered on chromosome 8. This gene differs Calculated MW from defensin, alpha 3 by only one amino acid. This gene and the gene encoding defensin, 10kDa alpha 3 are both subject to copy number variation. Category Primary antibody Applications WB, IHC, IF Cross-Reactivity Human, Mouse, Rat Recommended Dilutions Immunogen Information WB 1:500 - 1:2000 Gene ID Swiss Prot 1667 P59665 IHC 1:50 - 1:100 Immunogen IF 1:50 - 1:100 Recombinant fusion protein containing a sequence corresponding to amino acids 1-94 of human DEFA1 (NP_004075.1). Synonyms DEFA1;DEF1;DEFA2;HNP-1;HP-1;HP1;MRS Contact Product Information 400-999-6126 Source Isotype Purification Rabbit IgG Affinity purification [email protected] Storage www.abclonal.com.cn Store at -20℃. Avoid freeze / thaw cycles. Buffer: PBS with 0.02% sodium azide,50% glycerol,pH7.3. Validation Data Western blot analysis of extracts of various cell lines, using DEFA1 antibody (A6897) at 1:1000 dilution. -
Functional Interaction of Human Neutrophil Peptide-1 with the Cell Wall Precursor Lipid II
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector FEBS Letters 584 (2010) 1543–1548 journal homepage: www.FEBSLetters.org Functional interaction of human neutrophil peptide-1 with the cell wall precursor lipid II Erik de Leeuw a,*, Changqing Li a, Pengyun Zeng b, Chong Li b, Marlies Diepeveen-de Buin c, Wei-Yue Lu b, Eefjan Breukink c, Wuyuan Lu a,** a University of Maryland Baltimore School of Medicine, Institute of Human Virology and Department of Biochemistry and Molecular Biology, 725 West Lombard Street, Baltimore, MD 21201, USA b Fudan University School of Pharmacy, Shanghai, China c Utrecht University, Department of Biochemistry of Membranes, Bijvoet Center for Biomolecular Research, Padualaan 8, 3585 CH, Utrecht, The Netherlands article info abstract Article history: Defensins constitute a major class of cationic antimicrobial peptides in mammals and vertebrates, Received 11 January 2010 acting as effectors of innate immunity against infectious microorganisms. It is generally accepted Revised 1 March 2010 that defensins are bactericidal by disrupting the anionic microbial membrane. Here, we provide evi- Accepted 2 March 2010 dence that membrane activity of human a-defensins does not correlate with antibacterial killing. Available online 7 March 2010 We further show that the a-defensin human neutrophil peptide-1 (HNP1) binds to the cell wall pre- Edited by Renee Tsolis cursor lipid II and that reduction of lipid II levels in the bacterial membrane significantly reduces bacterial killing. The interaction between defensins and lipid II suggests the inhibition of cell wall synthesis as a novel antibacterial mechanism of this important class of host defense peptides. -
Endogenous Production of Antimicrobial Peptides in Innate Immunity and Human Disease Richard L
Endogenous Production of Antimicrobial Peptides in Innate Immunity and Human Disease Richard L. Gallo, MD, PhD, and Victor Nizet, MD Address The definition of an AMP has been loosely applied to Departments of Medicine and Pediatrics, Division of Dermatology, Uni- any peptide with the capacity to inhibit the growth of versity of California San Diego, and VA San Diego Healthcare System, microbes. AMPs might exhibit potent killing or inhibi- San Diego, CA, USA. E-mail: [email protected] tion of a broad range of microorganisms, including gram- positive and -negative bacteria as well as fungi and certain Current Allergy and Asthma Reports 2003, 3:402–409 Current Science Inc. ISSN 1529-7322 viruses. More than 800 such AMPs have been described, Copyright © 2003 by Current Science Inc. and an updated list can be found at the website: http:// www.bbcm.units.it/~tossi/pag1.htm. Some of these AMPs Antimicrobial peptides are diverse and evolutionarily ancient have now been demonstrated to protect diverse organ- molecules produced by all living organisms. Peptides belong- isms, including plants, insects, and mammals, against ing to the cathelicidin and defensin gene families exhibit an infection. AMP sequence analysis has shown that the pep- immune strategy as they defend against infection by inhibiting tide immune system is evolutionarily ancient, and the microbial survival, and modify hosts through triggering tis- conservation of AMP gene families throughout the ani- sue-specific defense and repair events. A variety of processes mal kingdom further supports their biologic significance. have evolved in microbes to evade the action of antimicrobial Antimicrobial peptides function within the conceptual peptides, including the ability to degrade or inactivate antimi- framework of the innate immune system. -
Avian Antimicrobial Host Defense Peptides: from Biology to Therapeutic Applications
Pharmaceuticals 2014, 7, 220-247; doi:10.3390/ph7030220 OPEN ACCESS pharmaceuticals ISSN 1424-8247 www.mdpi.com/journal/pharmaceuticals Review Avian Antimicrobial Host Defense Peptides: From Biology to Therapeutic Applications Guolong Zhang 1,2,3,* and Lakshmi T. Sunkara 1 1 Department of Animal Science, Oklahoma State University, Stillwater, OK 74078, USA 2 Department of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK 74078, USA 3 Department of Physiological Sciences, Oklahoma State University, Stillwater, OK 74078, USA * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-405-744-6619; Fax: +1-405-744-7390. Received: 6 February 2014; in revised form: 18 February 2014 / Accepted: 19 February 2014 / Published: 27 February 2014 Abstract: Host defense peptides (HDPs) are an important first line of defense with antimicrobial and immunomoduatory properties. Because they act on the microbial membranes or host immune cells, HDPs pose a low risk of triggering microbial resistance and therefore, are being actively investigated as a novel class of antimicrobials and vaccine adjuvants. Cathelicidins and β-defensins are two major families of HDPs in avian species. More than a dozen HDPs exist in birds, with the genes in each HDP family clustered in a single chromosomal segment, apparently as a result of gene duplication and diversification. In contrast to their mammalian counterparts that adopt various spatial conformations, mature avian cathelicidins are mostly α-helical. Avian β-defensins, on the other hand, adopt triple-stranded β-sheet structures similar to their mammalian relatives. Besides classical β-defensins, a group of avian-specific β-defensin-related peptides, namely ovodefensins, exist with a different six-cysteine motif. -
Immuno-Stimulatory Peptides As a Potential Adjunct Therapy Against Intra-Macrophagic Pathogens
molecules Review Immuno-Stimulatory Peptides as a Potential Adjunct Therapy against Intra-Macrophagic Pathogens Tânia Silva 1,2 and Maria Salomé Gomes 1,2,3,* ID 1 i3S—Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto 4200-135, Portugal; [email protected] 2 IBMC—Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto 4200-135, Portugal 3 ICBAS—Instituto de Ciências Biomédicas Abel Salazar, Universidade do Porto, Porto 4050-313, Portugal * Correspondence: [email protected]; Tel.: +35-122-607-4950 Received: 14 July 2017; Accepted: 3 August 2017; Published: 4 August 2017 Abstract: The treatment of infectious diseases is increasingly prone to failure due to the rapid spread of antibiotic-resistant pathogens. Antimicrobial peptides (AMPs) are natural components of the innate immune system of most living organisms. Their capacity to kill microbes through multiple mechanisms makes the development of bacterial resistance less likely. Additionally, AMPs have important immunomodulatory effects, which critically contribute to their role in host defense. In this paper, we review the most recent evidence for the importance of AMPs in host defense against intracellular pathogens, particularly intra-macrophagic pathogens, such as mycobacteria. Cathelicidins and defensins are reviewed in more detail, due to the abundance of studies on these molecules. The cell-intrinsic as well as the systemic immune-related effects of the different AMPs are discussed. In the face of the strong potential emerging from the reviewed studies, the prospects for future use of AMPs as part of the therapeutic armamentarium against infectious diseases are presented. Keywords: antimicrobial peptide; host-defense peptide; infection; Mycobacterium; defensin; cathelicidin; macrophage 1.