Biosynthesis and Functions of a Melanoid Pigment Produced by Species of the Sporothrix Complex in the Presence of L-Tyrosine

Total Page:16

File Type:pdf, Size:1020Kb

Biosynthesis and Functions of a Melanoid Pigment Produced by Species of the Sporothrix Complex in the Presence of L-Tyrosine Biosynthesis and Functions of a Melanoid Pigment Produced by Species of the Sporothrix Complex in the Presence of L-Tyrosine Rodrigo Almeida-Paes,a Susana Frases,b,f Glauber de Sousa Araújo,b,f Manoel Marques Evangelista de Oliveira,a Gary J. Gerfen,c Joshua D. Nosanchuk,d,e and Rosely Maria Zancopé-Oliveiraa Laboratório de Micologia, Instituto de Pesquisa Clínica Evandro Chagas, Fundação Oswaldo Cruz, Rio de Janeiro, Brazila; Instituto de Biofísica Prof. Carlos Chagas Filho, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazilb; Departments of Physiology and Biophysics,c Medicine, Division of Infectious Diseases,d Microbiology and Immunology,e Albert Einstein College of Medicine, Yeshiva University, Bronx, New York, USA; and Laboratório de Biotecnologia, Instituto Nacional de Metrologia, Normalização e Qualidade Industrial, Rio de Janeiro, Brazilf Sporothrix schenckii is the etiological agent of sporotrichosis, the main subcutaneous mycosis in Latin America. Melanin is an important virulence factor of S. schenckii, which produces dihydroxynaphthalene melanin (DHN-melanin) in conidia and yeast cells. Additionally, L-dihydroxyphenylalanine (L-DOPA) can be used to enhance melanin production on these structures as well as on hyphae. Some fungi are able to synthesize another type of melanoid pigment, called pyomelanin, as a result of tyrosine ca- tabolism. Since there is no information about tyrosine catabolism in Sporothrix spp., we cultured 73 strains, including represen- tatives of newly described Sporothrix species of medical interest, such as S. brasiliensis, S. schenckii, and S. globosa, in minimal medium with tyrosine. All strains but one were able to produce a melanoid pigment with a negative charge in this culture me- dium after 9 days of incubation. An S. schenckii DHN-melanin mutant strain also produced pigment in the presence of tyrosine. Further analysis showed that pigment production occurs in both the filamentous and yeast phases, and pigment accumulates in supernatants during stationary-phase growth. Notably, sulcotrione inhibits pigment production. Melanin ghosts of wild-type and DHN mutant strains obtained when the fungus was cultured with tyrosine were similar to melanin ghosts yielded in the ab- sence of the precursor, indicating that this melanin does not polymerize on the fungal cell wall. However, pyomelanin-producing fungal cells were more resistant to nitrogen-derived oxidants and to UV light. In conclusion, at least three species of the Sporo- thrix complex are able to produce pyomelanin in the presence of tyrosine, and this pigment might be involved in virulence. elanins are polymers with diverse molecular structures, typ- initially white to creamy but turn brown to black after a few days of Mically black or dark brown, formed by the oxidative poly- cultivation due to the production of DHN-melanin on conidial merization of phenolic and indolic compounds. They are pro- cells (17). Although yeast colonies grown at 37°C do not turn duced by a broad range of organisms, from bacteria to humans. black even after long periods of incubation, DHN-melanin is also Several fungi can produce melanins, and the functions of these produced within the cell walls of yeast both in vitro and during pigments are related to microbial survival under several unfavor- infection (12). Moreover, L-DOPA can be used to enhance mela- able environmental and host conditions (10, 14). The major mel- nin production on conidial and yeast cells as well as to induce anin type encountered among fungi is 1,8-dihydroxynaphthalene hyphal melanization (1). melanin (DHN-melanin), which is synthesized from acetyl coen- Since there is no information about tyrosine metabolism or zyme A via the polyketide pathway. This form of melanin is syn- pyomelanin production in species of the Sporothrix complex, we thesized by several plant and human fungal pathogens. In addition first decided to evaluate whether this fungus was capable of pyo- to DHN-melanin, certain fungi can also produce melanin via di- melanin synthesis and then examined its potential impact on the hydroxyphenylalanine (DOPA), in which tyrosinases or laccases biology of the fungi. hydroxylate tyrosine via DOPA to dopaquinone, which then MATERIALS AND METHODS auto-oxidizes and polymerizes, resulting in a polyphenolic het- eropolymer that is black (9). Some fungi produce a soluble mela- Strains. Seventy-three Sporothrix sp. strains were used to investigate the capacity of the species to produce pyomelanin. All strains were identified nin from L-tyrosine through p-hydroxyphenylpyruvate and ho- by morphological and biochemical characteristics at both 25°C and 36°C, mogentisic acid. This soluble pigment is called pyomelanin, and it and the identifications were confirmed by molecular criteria (11). The is similar to the alkaptomelanin produced by humans. Aspergillus strains were identified as S. schenckii (14 strains), S. brasiliensis (58 fumigatus, Madurella mycetomatis, and Yarrowia lipolytica are ex- strains), and S. globosa (1 strain). Reference strains were included: three S. amples of fungi that can produce this type of soluble pigment (4, schenckii reference strains (ATCC 16345, ATCC 32285, and ATCC 32286) 18, 20). and one S. brasiliensis strain (CBS 120339). All strains are maintained in Sporothrix schenckii is a dimorphic fungal pathogen that is the primary cause of sporotrichosis, a cosmopolitan subcutaneous mycosis that can affect humans and other animals, such as dogs, Received 1 August 2012 Accepted 26 September 2012 cats, horses, and armadillos (2). More recently, additional species Published ahead of print 5 October 2012 of Sporothrix, including Sporothrix brasiliensis and Sporothrix glo- Address correspondence to Rodrigo Almeida-Paes, rodrigo.paes@ipec.fiocruz.br. bosa, have been identified as important causes of human or mam- Copyright © 2012, American Society for Microbiology. All Rights Reserved. malian sporotrichosis (11). When cultured at 25°C to 30°C, the doi:10.1128/AEM.02414-12 fungus produces smooth and wrinkled mycelial colonies that are December 2012 Volume 78 Number 24 Applied and Environmental Microbiology p. 8623–8630 aem.asm.org 8623 Almeida-Paes et al. TABLE 1 Profile of dark pigment production of 73 strains of the TABLE 1 (Continued) Sporothrix complex used in this study Pigment productiona Pigment productiona Strain Species 25°C 37°C Strain Species 25°C 37°C ATCC 32285 S. schenckii ϩϩϩϩ ϩϩϩ CBS 120339 S. brasiliensis ϩϩϩATCC 32286 S. schenckii ϩϩϩ ϩϩϩ IPEC 17307 S. brasiliensis ϩϩϩ ϩϩϩ IOC 1113 S. schenckii ϩϩϩ ϩϩ IPEC 17521 S. brasiliensis ϩϩϩϩ ϩϩϩ IPEC 23249 S. schenckii ϩϩ ϩϩ IPEC 17585 S. brasiliensis ϩϩϩϩ ϩϩϩ IPEC 23250 S. schenckii Ϫ ϩϩϩ IPEC 17608 S. brasiliensis ϩϩϩ ϩϩϩ IPEC 23251 S. schenckii ϩϩ IPEC 17692 S. brasiliensis ϩϩϩ ϩϩϩ IPEC 23252 S. schenckii ϩϩϩϩ ϩ IPEC 17920 S. brasiliensis ϩϩϩϩ ϩϩ IPEC 23253 S. schenckii ϩϩϩϩ ϩϩϩ IPEC 18202-3 S. brasiliensis ϩϩϩ ϩ IPEC 24372-1 S. schenckii ϩϩ ϩϩϩ IPEC 18782A S. brasiliensis ϩϩϩϩ ϩϩ IPEC 25374 S. schenckii ϩϩϩ ϩϩ IPEC 18782B S. brasiliensis ϩϩ ϩ IPEC 25457 S. schenckii ϩϩϩϩ ϩϩϩ IPEC 19777 S. brasiliensis ϩϩ ϩ IPEC 27722 S. schenckii ϩϩϩϩ ϩϩϩ IPEC 22493-1 S. brasiliensis ϩϩ ϩ Mel-14 S. schenckii ϩϩϩϩ ϩϩϩ ϩϩϩ ϩϩ IPEC 22582 S. brasiliensis a Ϫ, no pigment production; ϩ, low-level pigment production; ϩϩ, light brown IPEC 25303 S. brasiliensis ϩϩ ϩϩ pigment production; ϩϩϩ, dark brown pigment production; ϩϩϩϩ, black pigment IPEC 25541 S. brasiliensis ϩϩϩ ϩϩ production. IPEC 25644 S. brasiliensis ϩϩ ϩϩϩ IPEC 25712 S. brasiliensis ϩϩϩ ϩϩϩ IPEC 25758 S. brasiliensis ϩϩ IPEC 25853 S. brasiliensis ϩϩϩ ϩϩ the pathogenic fungal culture collection of the Laboratorio de Micologia/ IPEC 25976 S. brasiliensis ϩϩϩ ϩ IPEC/Fiocruz (WDCM 951). Strain IPEC 26449, previously characterized IPEC 26034 S. brasiliensis ϩϩϩ ϩϩ by our group as a high-melanin-producing strain (1), was further studied IPEC 26156 S. brasiliensis ϩϩϩto examine conditions for pigment production and its functions. In addi- IPEC 26449 S. brasiliensis ϩϩϩϩ ϩϩϩ tion, a DHN-melanin-deficient mutant strain, Mel-14, which has a mu- IPEC 27588 S. brasiliensis ϩϩ ϩ tation in the polyketide synthase gene (17), was also studied to determine IPEC 28831 S. brasiliensis ϩϩ ϩϩ if DHN-melanin was involved in pyomelanin formation. IPEC 29039 S. brasiliensis ϩϩϩ ϩϩϩ Media. Defined chemical medium (minimal medium) for Sporothrix IPEC 29787 S. brasiliensis ϩϩ ϩϩ sp. growth consisted of 15 mM glucose, 10 mM MgSO4, 29.4 mM IPEC 30650 S. brasiliensis ϩϩϩKH2PO4, 13 mM glycine, and 3.0 mM thiamine (pH 5.5). Minimal me- IPEC 30682-1 S. brasiliensis ϩϩϩϩ ϩϩ dium with L-tyrosine was made by adding 10 mM L-tyrosine to minimal IPEC 31047-1 S. brasiliensis ϩϩϩ ϩϩ medium. Agar plates were made by adding 20 g/liter to the corresponding IPEC 31515 S. brasiliensis ϩϩ ϩϩϩ medium. All chemicals used to prepare culture media were purchased IPEC 31676 S. brasiliensis ϩϩ ϩϩ from Sigma-Aldrich (St. Louis, MO). IPEC 32004 S. brasiliensis ϩϩϩ ϩϩϩ Screening for pigment production. The 73 Sporothrix sp. strains were IPEC 32406 S. brasiliensis ϩϩ ϩ inoculated onto minimal medium agar plates with and without L-ty- IPEC 33601 S. brasiliensis ϩϩϩ ϩϩ rosine. Cultures were incubated at both 25°C and 36°C and checked daily IPEC 33611 S. brasiliensis ϩϩϩϩ ϩϩϩ for pigment production over a 20-day period. Also, cultures at 36°C were IPEC 33704 S. brasiliensis ϩϩϩ ϩϩ checked for the presence of yeast cells, and they were used only if at least IPEC 33822 S. brasiliensis ϩϩϩ ϩϩ 90% yeast cells were observed. IPEC 33946 S. brasiliensis ϩϩϩϩ ϩϩϩϩ Influence of sulcotrione and glyphosate. In order to check if pigment IPEC 34079 S. brasiliensis ϩϩϩ ϩϩ production could be suppressed or abolished by melanin synthesis inhib- IPEC 34105 S. brasiliensis ϩ ϩϩϩ itors, sulcotrione [2-(2-chloro-4-mesylbenzoyl)cyclohexane-1,3-dione] IPEC 34196 S.
Recommended publications
  • Downloaded from the National This Genus-Wide Comparative Analysis Determined That Center for Biotechnology Information Database (NCBI) Gastric Helicobacter Spp
    Mannion et al. BMC Genomics (2018) 19:830 https://doi.org/10.1186/s12864-018-5171-2 RESEARCHARTICLE Open Access Comparative genomics analysis to differentiate metabolic and virulence gene potential in gastric versus enterohepatic Helicobacter species Anthony Mannion*, Zeli Shen and James G. Fox Abstract Background: The genus Helicobacter are gram-negative, microaerobic, flagellated, mucus-inhabiting bacteria associated with gastrointestinal inflammation and classified as gastric or enterohepatic Helicobacter species (EHS) according to host species and colonization niche. While there are over 30 official species, little is known about the physiology and pathogenic mechanisms of EHS, which account for most in the genus, as well as what genetic factors differentiate gastric versus EHS, given they inhabit different hosts and colonization niches. The objective of this study was to perform a whole-genus comparative analysis of over 100 gastric versus EHS genomes in order to identify genetic determinants that distinguish these Helicobacter species and provide insights about their evolution/ adaptation to different hosts, colonization niches, and mechanisms of virulence. Results: Whole-genome phylogeny organized Helicobacter species according to their presumed gastric or EHS classification. Analysis of orthologs revealed substantial heterogeneity in physiological and virulence-related genes between gastric and EHS genomes. Metabolic reconstruction predicted that unlike gastric species, EHS appear asaccharolytic and dependent on amino/organic acids to fuel metabolism. Additionally, gastric species lack de novo biosynthetic pathways for several amino acids and purines found in EHS and instead rely on environmental uptake/ salvage pathways. Comparison of virulence factor genes between gastric and EHS genomes identified overlapping yet distinct profiles and included canonical cytotoxins, outer membrane proteins, secretion systems, and survival factors.
    [Show full text]
  • The Role of Amino Acids in Liver Protein Metabolism Under a High Protein Diet
    The role of amino acids in liver protein metabolism under a high protein diet : identification of amino acids signal and associated transduction pathways Nattida Chotechuang To cite this version: Nattida Chotechuang. The role of amino acids in liver protein metabolism under a high protein diet : identification of amino acids signal and associated transduction pathways. Food and Nutrition. AgroParisTech, 2010. English. NNT : 2010AGPT0026. pastel-00610998 HAL Id: pastel-00610998 https://pastel.archives-ouvertes.fr/pastel-00610998 Submitted on 25 Jul 2011 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. N° /__/__/__/__/__/__/__/__/__/__/ T H E S I S submitted to obtain the degree of Doctor of Philosophy at L’Institut des Sciences et Industries du Vivant et de l’Environnement (AgroParisTech) Speciality: Nutrition Science Presented and defended in public by Nattida CHOTECHUANG on 22nd March 2010 THE ROLE OF AMINO ACIDS IN LIVER PROTEIN METABOLISM UNDER A HIGH PROTEIN DIET: IDENTIFICATION OF AMINO ACIDS SIGNAL AND ASSOCIATED TRANSDUCTION PATHWAYS Thesis director: Daniel TOMÉ Thesis co-director: Dalila AZZOUT-MARNICHE AgroParisTech, UMR914 Nutrition Physiology and Ingestive Behaviour, F-75005 Paris to the jury: Mr.
    [Show full text]
  • Amino Acids, Peptides, Proteins: Introduction
    Chem 109 C Bioorganic Compounds Fall 2019 HFH1104 Armen Zakarian Office: Chemistry Bldn 2217 http://labs.chem.ucsb.edu/~zakariangroup/courses.html CLAS Instructor: Dhillon Bhavan [email protected] Amino acids, Peptides, Proteins: Introduction Chapter 21 O R OH NH2 α-amino acid O O + H N R R R OH 2 R N - H2O H peptide bond = amide bond Proteins: Function 21.1 3 Proteins: Structural Histone Protein Structure: DNA packaging 4 Proteins: Protective botulinum toxin (botox) structure most toxic substance known LD50 = 10 ng/kg Amino acids, Peptides, Proteins: Introduction O O R O R O H R R OH R N OH N N OH H NH2 H NH2 O NH2 O R α-amino acid dipeptide tripeptide ! oligopeptide: 3 - 10 amino acids ! polypeptide, or protein: many amino acids Proteins: Amino Acids, Configuration NH2 HO O phenylalanine O + - NH3 natural amino acids C O +H N H same as - have the L configuration (S) 3 O2C R R Amino acids: Classification • Hydrophobic: “water-fearing”, nonpolar side chains – Alkyl side chain • Hydrophilic: “water-loving” side chains – Polar, neutral side chains – Anionic – Cationic - Table 21.1 lists 20 most common natural occurring amino acids - The structures of amino acids will be provided on the tests nonpolar side chains polar neutral (uncharged) side chains Amino acids: Classification polar acidic (anionic) side chains Amino acids: Classification polar basic (cationic) side chains Amino acids: Classification PROBLEM 1 Explain why when the imidazole ring of histidine is protonated, the double-bonded nitrogen is the nitrogen atom that accepts the proton. same for guanidine group in arginine.
    [Show full text]
  • Lecture 11 - Biosynthesis of Amino Acids
    Lecture 11 - Biosynthesis of Amino Acids Chem 454: Regulatory Mechanisms in Biochemistry University of Wisconsin-Eau Claire 1 Introduction Biosynthetic pathways for amino acids, Text nucleotides and lipids are very old Biosynthetic (anabolic) pathways share common intermediates with the degradative (catabolic) pathways. The amino acids are the building blocks for proteins and other nitrogen-containing compounds 2 2 Introduction Nitrogen Fixation Text Reducing atmospheric N2 to NH3 Amino acid biosynthesis pathways Regulation of amino acid biosynthesis. Amino acids as precursors to other biological molecules. e.g., Nucleotides and porphoryns 3 3 Introduction Nitrogen fixation is carried out by a few Text select anaerobic micororganisms The carbon backbones for amino acids come from glycolysis, the citric acid cycle and the pentose phosphate pathway. The L–stereochemistry is enforced by transamination of α–keto acids 4 4 1. Nitrogen Fixation Microorganisms use ATP and ferredoxin to Text reduce atmospheric nitrogen to ammonia. 60% of nitrogen fixation is done by these microorganisms 15% of nitrogen fixation is done by lighting and UV radiation. 25% by industrial processes Fritz Habers (500°C, 300!atm) N2 + 3 H2 2 N2 5 5 1. Nitrogen Fixation Enzyme has both a reductase and a Text nitrogenase activity. 6 6 1.1 The Reductase (Fe protein) Contains a 4Fe-4S Text center Hydrolysis of ATP causes a conformational change that aids the transfer of the electrons to the nitrogenase domain (MoFe protein) 7 7 1.1 The Nitrogenase (MoFe Protein) The nitrogenase Text component is an α2β2 tetramer (240#kD) Electrons enter the P-cluster 8 8 1.1 The Nitrogenase (MoFe Protein) An Iron-Molybdenum cofactor for the Text nitrogenase binds and reduces the atmospheric nitrogen.
    [Show full text]
  • From Carbon-11-Labeled Amino Acids to Peptides in Positron Emission Tomography: the Synthesis and Clinical Application Aleksandra Pekošak, Ulrike Filp, Alex J
    Mol Imaging Biol (2018) DOI: 10.1007/s11307-018-1163-5 * The Author(s), 2018. This article is an open access publication REVIEW ARTICLE From Carbon-11-Labeled Amino Acids to Peptides in Positron Emission Tomography: the Synthesis and Clinical Application Aleksandra Pekošak, Ulrike Filp, Alex J. Poot, Albert D. Windhorst Radionuclide Center, Department of Radiology and Nuclear Medicine, VU University Medical Center, De Boelelaan 1085c, 1081 HV, Amsterdam, The Netherlands Abstract Radiolabeled amino acids, their derivatives and peptides have a broad scope of application and can be used as receptor ligands, as well as enzyme substrates for many different diseases as radiopharmaceutical tracers. Over the past few decades, the application of molecular imaging techniques such as positron emission tomography (PET) has gained considerable importance and significance in diagnosis in today’s advanced health care. Next to that, the availability of cyclotrons and state-of-the-art radiochemistry facilities has progressed the production of imaging agents enabling the preparation of many versatile PET radiotracers. Due to many favorable characteristics of radiolabeled amino acids and peptides, they can be used for tumor staging and monitoring the progress of therapy success, while aromatic amino acids can be employed as PET tracer to study neurological disorders. This review provides a comprehensive overview of radiosynthetic and enzymatic approaches towards carbon-11 amino acids, their analogues and peptides, with focus on stereoselective reactions, and reflects upon their clinical application. Key Words: Carbon-11, Amino acid, Peptide, Radiolabeling, PET imaging Introduction D-glucose ([18F]FDG) as well as a large variety of other PET tracers like receptor ligands or enzyme substrates.
    [Show full text]
  • Efficacy of Dietary Guanidinoacetic Acid in Broiler Chicks
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Illinois Digital Environment for Access to Learning and Scholarship Repository EFFICACY OF DIETARY GUANIDINOACETIC ACID IN BROILER CHICKS BY AMANDA ASHLEY DEGROOT THESIS Submitted in partial fulfillment of the requirements for the degree of Master of Science in Animal Sciences in the Graduate College of the University of Illinois at Urbana-Champaign, 2014 Urbana, Illinois Master’s Committee: Assistant Professor Ryan N. Dilger, Advisor, Chair Professor Carl M. Parsons Professor Hans H. Stein i ABSTRACT Three studies were conducted to determine the arginine (Arg) sparing effect of guanidinoacetic acid (GAA) and the efficacy of GAA to support growth performance and muscle phosphagen homeostasis in chicks when supplemented in either Arg-deficient or Arg-adequate diets. Study 1 established that 0.12% GAA supplementation increased (P < 0.05) gain:feed (G:F) by 7% on average compared with the 0.0% GAA negative controls. Bodyweight gain (BWG) increased (P < 0.05) and G:F (P < 0.05) for d 15 to 22 and d 8 to 22 with increasing Arg and GAA supplementation, proving that diets were successfully Arg deficient, and Arg and GAA supplementation alleviated the deficiency. Muscle metabolites, including phosphocreatine (PCr) and PCr:ATP, were increased (P < 0.05) by an average of 101% and 103%, respectively, with 0.12% GAA compared with the 0.0% GAA negative controls. Total Cre (tCre) was increased (Arg and GAA interaction, P < 0.05) by 41 and 51% with 0.12% GAA when included in diets containing 0.0 or 0.16% added Arg, respectively.
    [Show full text]
  • Glutamate Synthase: Structural, Mechanistic and Regulatory Properties, and Role in the Amino Acid Metabolism
    Photosynthesis Research (2005) 83: 191–217 Ó Springer 2005 Review Glutamate synthase: structural, mechanistic and regulatory properties, and role in the amino acid metabolism Akira Suzuki1,* & David B. Knaff2 1Unite´ de Nutrition Azote´e des Plantes, Institut National de la Recherche Agronomique, Route de Saint-Cyr, 78026 Versailles cedex, France; 2Department of Chemistry and Biochemistry, Texas Tech University, P.O. Box 41061, Lubbock, TX 79409-1061, USA; *Author for correspondence (e-mail: [email protected]; fax: +33-1-30833096) Received 28 June 2004; accepted in revised form 20 September 2004 Key words: ammonium assimilation, glutamate synthase, glutamine synthetase, higher plants, nitrogen metabolism Abstract Ammonium ion assimilation constitutes a central metabolic pathway in many organisms, and glutamate synthase, in concert with glutamine synthetase (GS, EC 6.3.1.2), plays the primary role of ammonium ion incorporation into glutamine and glutamate. Glutamate synthase occurs in three forms that can be dis- tinguished based on whether they use NADPH (NADPH-GOGAT, EC 1.4.1.13), NADH (NADH-GO- GAT, EC 1.4.1.14) or reduced ferredoxin (Fd-GOGAT, EC 1.4.7.1) as the electron donor for the (two- electron) conversion of L-glutamine plus 2-oxoglutarate to L-glutamate. The distribution of these three forms of glutamate synthase in different tissues is quite specific to the organism in question. Gene structures have been determined for Fd-, NADH- and NADPH-dependent glutamate synthases from different organisms, as shown by searches in nucleic acid sequence data banks. Fd-glutamate synthase contains two electron-carrying prosthetic groups, the redox properties of which are discussed.
    [Show full text]
  • Glyphosate's Suppression of Cytochrome P450 Enzymes
    Entropy 2013, 15, 1416-1463; doi:10.3390/e15041416 OPEN ACCESS entropy ISSN 1099-4300 www.mdpi.com/journal/entropy Review Glyphosate’s Suppression of Cytochrome P450 Enzymes and Amino Acid Biosynthesis by the Gut Microbiome: Pathways to Modern Diseases Anthony Samsel 1 and Stephanie Seneff 2,* 1 Independent Scientist and Consultant, Deerfield, NH 03037, USA; E-Mail: [email protected] 2 Computer Science and Artificial Intelligence Laboratory, MIT, Cambridge, MA 02139, USA * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-617-253-0451; Fax: +1-617-258-8642. Received: 15 January 2013; in revised form: 10 April 2013 / Accepted: 10 April 2013 / Published: 18 April 2013 Abstract: Glyphosate, the active ingredient in Roundup®, is the most popular herbicide used worldwide. The industry asserts it is minimally toxic to humans, but here we argue otherwise. Residues are found in the main foods of the Western diet, comprised primarily of sugar, corn, soy and wheat. Glyphosate's inhibition of cytochrome P450 (CYP) enzymes is an overlooked component of its toxicity to mammals. CYP enzymes play crucial roles in biology, one of which is to detoxify xenobiotics. Thus, glyphosate enhances the damaging effects of other food borne chemical residues and environmental toxins. Negative impact on the body is insidious and manifests slowly over time as inflammation damages cellular systems throughout the body. Here, we show how interference with CYP enzymes acts synergistically with disruption of the biosynthesis of aromatic amino acids by gut bacteria, as well as impairment in serum sulfate transport. Consequences are most of the diseases and conditions associated with a Western diet, which include gastrointestinal disorders, obesity, diabetes, heart disease, depression, autism, infertility, cancer and Alzheimer’s disease.
    [Show full text]
  • The Biochemistry and Physiology of Protein and Amino Acid Metabolism, with Reference to Protein Nutrition
    Protein Metabolism During Infancy, edited by Niels C. R. Raiha. Nestle Nutrition Workshop Series, Vol. 33. Nestec Ltd., Vevey/ Raven Press, Ltd., New York © 1994. The Biochemistry and Physiology of Protein and Amino Acid Metabolism, with Reference to Protein Nutrition Vernon R. Young, Antoine E. El-Khoury, Melchor Sanchez, and Leticia Castillo Laboratory of Human Nutrition, School of Science and Clinical Research Center, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA All of the relevant topics that could be included under the title of this chapter would cover an extraordinary range of biological knowledge; more than is possible to include in an article of restricted length. Because of this and because of our own limited area of understanding, we have adopted the strategy of covering a few selected areas without attempting to be comprehensive; further elaboration of some of these areas will be made in later chapters. The emphasis to be given here is toward physiol- ogy rather than biochemistry, since our own interests relate to the flows of metabo- lites through pathways and the impact of nutritional and other factors that affect these, as well as the in vivo mechanisms involved. A particular biochemical focus would involve giving more attention to the detailed cellular and subcellular pathways responsible for the formation of proteins and amino acids, their movement to particu- lar sites, and their interconversion and degradation, together with details of the molec- ular mechanisms by which these processes take place. Our objective is to attempt to provide a better understanding of the metabolic basis of the protein and amino acid requirements under various pathophysiological conditions.
    [Show full text]
  • Fortifying Horticultural Crops with Essential Amino Acids: a Review
    Review Fortifying Horticultural Crops with Essential Amino Acids: A Review Guoping Wang 1, Mengyun Xu 1, Wenyi Wang 1,2,* and Gad Galili 2,* 1 College of Horticulture, South China Agricultural University, Guangzhou 510642, China; [email protected] (G.W.); [email protected] (M.X.) 2 Department of Plant Science, Weizmann Institute of Science, Rehovot 76100, Israel * Corresponding author: [email protected] (W.W.); [email protected] (G.G.); Tel.: +972-8-934-3511 (G.G.); Fax: +972-8-934-4181 (G.G.) Received: 17 May 2017; Accepted: 14 June 2017; Published: 19 June 2017 Abstract: To feed the world′s growing population, increasing the yield of crops is not the only important factor, improving crop quality is also important, and it presents a significant challenge. Among the important crops, horticultural crops (particularly fruits and vegetables) provide numerous health compounds, such as vitamins, antioxidants, and amino acids. Essential amino acids are those that cannot be produced by the organism and, therefore, must be obtained from diet, particularly from meat, eggs, and milk, as well as a variety of plants. Extensive efforts have been devoted to increasing the levels of essential amino acids in plants. Yet, these efforts have been met with very little success due to the limited genetic resources for plant breeding and because high essential amino acid content is generally accompanied by limited plant growth. With a deep understanding of the biosynthetic pathways of essential amino acids and their interactions with the regulatory networks in plants, it should be possible to use genetic engineering to improve the essential amino acid content of horticultural plants, rendering these plants more nutritionally favorable crops.
    [Show full text]
  • Effects of L-Eopa on Lysine Compartmentation And
    EFFECTS OF L-EOPA ON LYSINE COMPARTMENTATION AND PROTEIN T SYNTHESIS IN EAT BEAIN C i V \ K i n A Thesis submitted by lioO, FAETIN M V T D KING a candidate for the Degree of Doctor of Philosophy in BIOCHEMISTRY Department of Biochemistry Royal Holloway College University of London Egham Hill Egham January 1980 Surrey ProQuest Number: 10097487 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. uest. ProQuest 10097487 Published by ProQuest LLC(2016). Copyright of the Dissertation is held by the Author. All rights reserved. This work is protected against unauthorized copying under Title 17, United States Code. Microform Edition © ProQuest LLC. ProQuest LLC 789 East Eisenhower Parkway P.O. Box 1346 Ann Arbor, Ml 48106-1346 — 11 — ACKNOWLEDGEMENTS I wish to express my gratitude to Dr P. W. Beesley for his unending enthusiasm and encouragement while this work was in progress. I am also indebted to Professor J. B. Pridham for his continued interest and support. In addition I owe much to other staff and postgraduate students in the Biochemistry Department at Royal Holloway College for their helpful discussions. My thanks are also due to Mr G. P. Beaumont for his guidance in connection with the statistical treatment of data and who, in collaboration with Mr J. Anderson, provided the results given in Tables A2 and AIJ.
    [Show full text]
  • 24Amino Acids, Peptides, and Proteins
    WADEMC24_1153-1199hr.qxp 16-12-2008 14:15 Page 1153 CHAPTER COOϪ a -h eli AMINO ACIDS, x ϩ PEPTIDES, AND NH3 PROTEINS Proteins are the most abundant organic molecules 24-1 in animals, playing important roles in all aspects of cell structure and function. Proteins are biopolymers of Introduction 24A-amino acids, so named because the amino group is bonded to the a carbon atom, next to the carbonyl group. The physical and chemical properties of a protein are determined by its constituent amino acids. The individual amino acid subunits are joined by amide linkages called peptide bonds. Figure 24-1 shows the general structure of an a-amino acid and a protein. α carbon atom O H2N CH C OH α-amino group R side chain an α-amino acid O O O O O H2N CH C OH H2N CH C OH H2N CH C OH H2N CH C OH H2N CH C OH CH3 CH2OH H CH2SH CH(CH3)2 alanine serine glycine cysteine valine several individual amino acids peptide bonds O O O O O NH CH C NH CH C NH CH C NH CH C NH CH C CH3 CH2OH H CH2SH CH(CH3)2 a short section of a protein a FIGURE 24-1 Structure of a general protein and its constituent amino acids. The amino acids are joined by amide linkages called peptide bonds. 1153 WADEMC24_1153-1199hr.qxp 16-12-2008 14:15 Page 1154 1154 CHAPTER 24 Amino Acids, Peptides, and Proteins TABLE 24-1 Examples of Protein Functions Class of Protein Example Function of Example structural proteins collagen, keratin strengthen tendons, skin, hair, nails enzymes DNA polymerase replicates and repairs DNA transport proteins hemoglobin transports O2 to the cells contractile proteins actin, myosin cause contraction of muscles protective proteins antibodies complex with foreign proteins hormones insulin regulates glucose metabolism toxins snake venoms incapacitate prey Proteins have an amazing range of structural and catalytic properties as a result of their varying amino acid composition.
    [Show full text]