The Peril of the Plankton Dawn Vaughn1,2,*,† and Jonathan D
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MARINE FAUNA and FLORA of BERMUDA a Systematic Guide to the Identification of Marine Organisms
MARINE FAUNA AND FLORA OF BERMUDA A Systematic Guide to the Identification of Marine Organisms Edited by WOLFGANG STERRER Bermuda Biological Station St. George's, Bermuda in cooperation with Christiane Schoepfer-Sterrer and 63 text contributors A Wiley-Interscience Publication JOHN WILEY & SONS New York Chichester Brisbane Toronto Singapore ANTHOZOA 159 sucker) on the exumbrella. Color vari many Actiniaria and Ceriantharia can able, mostly greenish gray-blue, the move if exposed to unfavorable condi greenish color due to zooxanthellae tions. Actiniaria can creep along on their embedded in the mesoglea. Polyp pedal discs at 8-10 cm/hr, pull themselves slender; strobilation of the monodisc by their tentacles, move by peristalsis type. Medusae are found, upside through loose sediment, float in currents, down and usually in large congrega and even swim by coordinated tentacular tions, on the muddy bottoms of in motion. shore bays and ponds. Both subclasses are represented in Ber W. STERRER muda. Because the orders are so diverse morphologically, they are often discussed separately. In some classifications the an Class Anthozoa (Corals, anemones) thozoan orders are grouped into 3 (not the 2 considered here) subclasses, splitting off CHARACTERISTICS: Exclusively polypoid, sol the Ceriantharia and Antipatharia into a itary or colonial eNIDARIA. Oral end ex separate subclass, the Ceriantipatharia. panded into oral disc which bears the mouth and Corallimorpharia are sometimes consid one or more rings of hollow tentacles. ered a suborder of Scleractinia. Approxi Stomodeum well developed, often with 1 or 2 mately 6,500 species of Anthozoa are siphonoglyphs. Gastrovascular cavity compart known. Of 93 species reported from Ber mentalized by radially arranged mesenteries. -
Coelenterata: Anthozoa), with Diagnoses of New Taxa
PROC. BIOL. SOC. WASH. 94(3), 1981, pp. 902-947 KEY TO THE GENERA OF OCTOCORALLIA EXCLUSIVE OF PENNATULACEA (COELENTERATA: ANTHOZOA), WITH DIAGNOSES OF NEW TAXA Frederick M. Bayer Abstract.—A serial key to the genera of Octocorallia exclusive of the Pennatulacea is presented. New taxa introduced are Olindagorgia, new genus for Pseudopterogorgia marcgravii Bayer; Nicaule, new genus for N. crucifera, new species; and Lytreia, new genus for Thesea plana Deich- mann. Ideogorgia is proposed as a replacement ñame for Dendrogorgia Simpson, 1910, not Duchassaing, 1870, and Helicogorgia for Hicksonella Simpson, December 1910, not Nutting, May 1910. A revised classification is provided. Introduction The key presented here was an essential outgrowth of work on a general revisión of the octocoral fauna of the western part of the Atlantic Ocean. The far-reaching zoogeographical affinities of this fauna made it impossible in the course of this study to ignore genera from any part of the world, and it soon became clear that many of them require redefinition according to modern taxonomic standards. Therefore, the type-species of as many genera as possible have been examined, often on the basis of original type material, and a fully illustrated generic revisión is in course of preparation as an essential first stage in the redescription of western Atlantic species. The key prepared to accompany this generic review has now reached a stage that would benefit from a broader and more objective testing under practical conditions than is possible in one laboratory. For this reason, and in order to make the results of this long-term study available, even in provisional form, not only to specialists but also to the growing number of ecologists, biochemists, and physiologists interested in octocorals, the key is now pre- sented in condensed form with minimal illustration. -
Octocoral Physiology: Calcium Carbonate Composition and the Effect of Thermal Stress on Enzyme Activity
OCTOCORAL PHYSIOLOGY: CALCIUM CARBONATE COMPOSITION AND THE EFFECT OF THERMAL STRESS ON ENZYME ACTIVITY by Hadley Jo Pearson A thesis submitted to the faculty of The University of Mississippi in partial fulfillment of the requirements of the Sally McDonnell Barksdale Honors College. Oxford May 2014 Approved by Advisor: Dr. Tamar Goulet Reader: Dr. Gary Gaston Reader: Dr. Marc Slattery © 2014 Hadley Jo Pearson ALL RIGHTS RESERVED ii ACKNOWLEDGMENTS I would like to thank everyone who has helped me to make this thesis a reality. First, I would like to thank Dr. Tamar L. Goulet for her direction in helping me both to choose my topics of study, and to find the finances needed for me to participate in field research in Mexico. Her help in cleaning up my writing was greatly needed and appreciated. I would also like to thank Kartick Shirur. This project would have been completely impossible without his gracious, continuous help over the past three years. Our many late nights in the lab would have been unbearable without his patience, humor, and impeccable taste in music. Thank you for teaching me so much, while keeping my spirits high. Your contributions are invaluable. I would be remiss in not also thanking my other travel companions from my two summers in Mexico: Dr. Denis Goulet, Blake Ramsby, Mark McCauley, and Lauren Camp. Thank you for teaching and helping me along this very, very long journey. I thank my other thesis readers for their time and effort: Dr. Gary Gaston and Dr. Marc Slattery. Also, thank you to Dr. Colin Jackson for the use of his laboratory equipment. -
Observations on the Size, Predators and Tumor-Like Outgrowths of Gorgonian Octocoral Colonies in the Area of Santa Marta, Caribbean Coast of Colombia
Northeast Gulf Science Volume 11 Article 1 Number 1 Number 1 7-1990 Observations on the Size, Predators and Tumor- Like Outgrowths of Gorgonian Octocoral Colonies in the Area of Santa Marta, Caribbean Coast of Colombia Leonor Botero Instituto de Investigaciones Marinas de Punta de Betin INVEMAR DOI: 10.18785/negs.1101.01 Follow this and additional works at: https://aquila.usm.edu/goms Recommended Citation Botero, L. 1990. Observations on the Size, Predators and Tumor-Like Outgrowths of Gorgonian Octocoral Colonies in the Area of Santa Marta, Caribbean Coast of Colombia. Northeast Gulf Science 11 (1). Retrieved from https://aquila.usm.edu/goms/vol11/iss1/1 This Article is brought to you for free and open access by The Aquila Digital Community. It has been accepted for inclusion in Gulf of Mexico Science by an authorized editor of The Aquila Digital Community. For more information, please contact [email protected]. Botero: Observations on the Size, Predators and Tumor-Like Outgrowths of Northeast Gulf Science Vol. 11, No. 1 July 1990 p. 1-10 OBSERVATIONS ON THE SIZE, PREDATORS AND TUMOR-LIKE OUTGROWTHS OF GORGONIAN OCTOCORAL COLONIES IN THE AREA OF SANTA MARTA, CARIBBEAN COAST OF COLOMBIA Leonor Botero Institute de Investigaciones Marinas de Punta de Betin INVEMAR Apartado Aereo 1016 Santa Marta, Colombia South America ABSTRACT: Gorgon ian communities of the Santa Marta area are dominated by species with large numbers of large colonies (height ;;.40 em) in contrast to that reported for other Caribbean sites where species with large numbers of small (<10 em in height) colonies are predominant. -
Fertilization Selection on Egg and Jelly-Coat Size in the Sand Dollar Dendraster Excentricus
Evolution, 55(12), 2001, pp. 2479±2483 FERTILIZATION SELECTION ON EGG AND JELLY-COAT SIZE IN THE SAND DOLLAR DENDRASTER EXCENTRICUS DON R. LEVITAN1,2 AND STACEY D. IRVINE2 1Department of Biological Science, Florida State University, Tallahassee, Florida 32306-1100 2Bam®eld Marine Station, Bam®eld, British Columbia VOR 1B0, Canada Abstract. Organisms with external fertilization are often sperm limited, and in echinoids, larger eggs have a higher probability of fertilization than smaller eggs. This difference is thought to be a result of the more frequent sperm- egg collisions experienced by larger targets. Here we report how two components of egg target size, the egg cell and jelly coat, contributed to fertilization success in a selection experiment. We used a cross-sectional analysis of correlated characters to estimate the selection gradients on egg and jelly-coat size in ®ve replicate male pairs of the sand dollar Dendraster excentricus. Results indicated that eggs with larger cells and jelly coats were preferentially fertilized under sperm limitation in the laboratory. The selection gradients were an average of 922% steeper for egg than for jelly- coat size. The standardized selection gradients for egg and jelly-coat size were similar. Our results suggest that fertilization selection can act on both egg-cell and jelly-coat size but that an increase in egg-cell volume is much more likely to increase fertilization success than an equal change in jelly-coat volume. The strengths of the selection gradients were inversely related to the correlation of egg traits across replicate egg clutches. This result suggests the importance of replication in studies of selection of correlated characters. -
Terrestrial and Marine Biological Resource Information
APPENDIX C Terrestrial and Marine Biological Resource Information Appendix C1 Resource Agency Coordination Appendix C2 Marine Biological Resources Report APPENDIX C1 RESOURCE AGENCY COORDINATION 1 The ICF terrestrial biological team coordinated with relevant resource agencies to discuss 2 sensitive biological resources expected within the terrestrial biological study area (BSA). 3 A summary of agency communications and site visits is provided below. 4 California Department of Fish and Wildlife: On July 30, 2020, ICF held a conference 5 call with Greg O’Connell (Environmental Scientist) and Corianna Flannery (Environmental 6 Scientist) to discuss Project design and potential biological concerns regarding the 7 Eureka Subsea Fiber Optic Cables Project (Project). Mr. O’Connell discussed the 8 importance of considering the western bumble bee. Ms. Flannery discussed the 9 importance of the hard ocean floor substrate and asked how the cable would be secured 10 to the ocean floor to reduce or eliminate scour. The western bumble bee has been 11 evaluated in the Biological Resources section of the main document, and direct and 12 indirect impacts are avoided. The Project Description describes in detail how the cable 13 would be installed on the ocean floor, the importance of the hard bottom substrate, and 14 the need for avoidance. 15 Consultation Outcomes: 16 • The Project was designed to avoid hard bottom substrate, and RTI Infrastructure 17 (RTI) conducted surveys of the ocean floor to ensure that proper routing of the 18 cable would occur. 19 • Ms. Flannery will be copied on all communications with the National Marine 20 Fisheries Service 21 California Department of Fish and Wildlife: On August 7, 2020, ICF held a conference 22 call with Greg O’Connell to discuss a site assessment and survey approach for the 23 western bumble bee. -
Heterotrophic Feeding by Gorgonian Corals with Symbiotic Zooxanthella
Heterotrophic feeding by gorgonian corals with symbiotic zooxanthella Marta Ribes, Rafel Coma, and Josep-Maria Gili Institut de Ciències del Mar, Passeig Joan de Borbó s/n, 08039 Barcelona, Spain Abstract Gorgonians are one of the most characteristic groups in Caribbean coral reef communities. In this study, we measured in situ rates of grazing on pico-, nano-, and microplankton, zooxanthellae release, and respiration for the ubiquitous symbiotic gorgonian coral Plexaura flexuosa. Zooplankton capture by P. flexuosa and Pseudoplexaura porosa was quantified by examination of stomach contents. In nature, both species captured zooplankton prey ranging from 100 to 700 µm, at a grazing rate of 0.09 and 0.23 prey polyp-1 d-l, respectively. Because of the greater mean size of the prey and the higher mean prey capture per polyp, P. porosa obtained 3.4 × l0-s mg C polyp-1 d-l from zooplankton, about four times the grazing rate of P. flexuosa. On average, P. flexuosa captured 7.2 ± 1.9 microorganisms polyp-1 d-l including ciliates, dinoflagellates, and diatoms, but they did not appear to graze significantly on organisms <5 µm (heterotrophic bacteria, Prochlorococcus sp., Synechococcus sp., or pi- coeukaryotes). Zooplankton and microbial prey accounted for only 0.4% of respiratory requirements in P. flexuosa, but they contributed 17% of nitrogen required annually for new production (growth and reproduction). Although the contribution of microbial prey to gorgonian energetics was low, dense gorgonian populations found on many Caribbean reefs may be important grazers of plankton communities. The role of food as a constraining factor in population and photosynthetic products are deficient in nutrients such. -
In Situ Rates of Fertilization Among Broadcast Spawning Gorgonian Corals
Reference: Biol. Bull. 190: 45-55. (February, 1996) In situ Rates of Fertilization Among Broadcast Spawning Gorgonian Corals HOWARD R. LASKER, DANIEL A. BRAZEAU1, JULIO CALDERON2, MARY ALICE COFFROTH, RAFEL COMA, AND KIHO KIM Department of Biological Sciences, State University of New York at Buffalo, g#z/o,#ew Fort 74260 Abstract. Fertilization rates among marine benthic column as gametes are diluted, spawning behavior of taxa have implicitly been assumed to be uniformly high the gorgonians, and the current regime. Fertilization in most analyses of life history evolution, but in situ rates are often low and may represent a limiting step fertilization rates during natural spawning events are in recruitment during some years. Low fertilization rates rarely measured. Fertilization rates of the Caribbean may also be an important component of the life history gorgonians Plexaura kuna and Pseudoplexaura porosa evolution of these species. were measured at a site in the San Bias Islands, Panama, by collecting eggs downstream of colonies during syn- Introduction chronous spawning events during the summer months in the years 1988-1994. Eggs collected by divers were One of the primary goals of benthic ecology has been incubated, and the proportion of eggs that developed the determination of the factors limiting populations. For was determined. Proportions of eggs developing suggest most of this century, such efforts have been concentrated fertilization rates that vary from 0% to 100%. Monthly on post-recruitment events in the life history of the or- means ranged from 0% to 60.4%. Failure of gametes to ganism (i.e., Connell, 1961, and hundreds of subsequent develop can be attributed to sperm limitation, as eggs studies). -
Assessment of Alaskan Marine Species for Toxicity Tests
Assessment of Alaskan Marine Species for Toxicity Tests Institute of Northern Engineering Robert A. Perkins, PE CONTENTS SECTION TITLE PAGE No. I. Executive Summary, Conclusions, and 1 Recommendations II. Introduction 6 III. Selection Criteria for an Alaskan Test Species 9 IV. Taxonomy of Plausible Test Species 16 V Discussion of Species, General 23 V.A Shrimp 25 V.B Crabs 27 V.C Mysids 29 V.D Copepods 31 V.E.I Mollusks, bivalves 32 V.E.II Mollusks, gastropods 35 V.F. Echinoderms 36 V.G. Fish 38 VI. References 49 VII. Acknowledgements 51 I. Executive summary, conclusions, and recommendations The standard toxicity test protocols for marine organisms expose a warm-water test species to test chemicals. Most tests are done at room temperature (25 o C). For colder water, for example the typical Alaskan marine water temperature of 4 o C, there are no standard toxicity test protocols. Many of the standard test protocols can be emulated, by following all the standard procedures, and reducing the test water temperature to the desired colder temperature. The test temperatures relative to Alaskan waters, however, are likely to be fatal to most standard test species. This paper summarizes a literature search and interviews with Alaskan marine biological experts in an effort to identify Alaskan species that would be suitable for toxicity testing in cold water. The toxicity test protocols considered were primarily those of the Chemical Response to Oil Spills: Ecological Effects Research Forum (CROSERF). CROSERF is a research group composed of laboratories from government, academia and industry dedicated to improving laboratory research on the ecological effects of chemical agents used in oil spill response [8]. -
Reference DNA Barcodes and Other Mitochondrial Markers for Identifying Caribbean Octocorals
Biodiversity Data Journal 7: e30970 doi: 10.3897/BDJ.7.e30970 Research Article Reference DNA barcodes and other mitochondrial markers for identifying Caribbean Octocorals Jaime G. Morín‡, Dagoberto E. Venera-Pontón§, Amy C. Driskell|, Juan A. Sánchez¶, Howard R. Lasker#, Rachel Collin ¤ ‡ Laboratorio de Sistemática Molecular y Filogeografía, Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima, Peru § Smithsonian Tropical Research Institute, Panama City, Panama | Laboratories of Analytical Biology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., United States of America ¶ Laboratorio de Biología Molecular Marina – BIOMMAR, Bogotá, Colombia # Department of Geology, University at Buffalo, Buffalo, United States of America ¤ Smithsonian Tropical Research Institute, Balboa, Panama Corresponding author: Rachel Collin ([email protected]) Academic editor: Danwei Huang Received: 31 Oct 2018 | Accepted: 04 Feb 2019 | Published: 20 Feb 2019 Citation: Morín J, Venera-Pontón D, Driskell A, Sánchez J, Lasker H, Collin R (2019) Reference DNA barcodes and other mitochondrial markers for identifying Caribbean Octocorals. Biodiversity Data Journal 7: e30970. https://doi.org/10.3897/BDJ.7.e30970 Abstract DNA barcoding is a useful tool for documenting the diversity of metazoans. The most commonly used barcode markers, 16S and COI, are not considered suitable for species identification within some "basal" phyla of metazoans. Nevertheless metabarcoding studies of bulk mixed samples commonly use these markers and may obtain sequences for "basal" phyla. We sequenced mitochondrial DNA fragments of cytochrome oxidase c subunit I (COI), 16S ribosomal RNA (16S), NADH dehydrogenase subunits 2 (16S-ND2), 6 (ND6- ND3) and 4L (ND4L-MSH) for 27 species of Caribbean octocorals to create a reference barcode dataset and to compare the utility of COI and 16S to other markers more typically used for octocorals. -
Host-Microbe Interactions in Octocoral Holobionts - Recent Advances and Perspectives Jeroen A
van de Water et al. Microbiome (2018) 6:64 https://doi.org/10.1186/s40168-018-0431-6 REVIEW Open Access Host-microbe interactions in octocoral holobionts - recent advances and perspectives Jeroen A. J. M. van de Water* , Denis Allemand and Christine Ferrier-Pagès Abstract Octocorals are one of the most ubiquitous benthic organisms in marine ecosystems from the shallow tropics to the Antarctic deep sea, providing habitat for numerous organisms as well as ecosystem services for humans. In contrast to the holobionts of reef-building scleractinian corals, the holobionts of octocorals have received relatively little attention, despite the devastating effects of disease outbreaks on many populations. Recent advances have shown that octocorals possess remarkably stable bacterial communities on geographical and temporal scales as well as under environmental stress. This may be the result of their high capacity to regulate their microbiome through the production of antimicrobial and quorum-sensing interfering compounds. Despite decades of research relating to octocoral-microbe interactions, a synthesis of this expanding field has not been conducted to date. We therefore provide an urgently needed review on our current knowledge about octocoral holobionts. Specifically, we briefly introduce the ecological role of octocorals and the concept of holobiont before providing detailed overviews of (I) the symbiosis between octocorals and the algal symbiont Symbiodinium; (II) the main fungal, viral, and bacterial taxa associated with octocorals; (III) the dominance of the microbial assemblages by a few microbial species, the stability of these associations, and their evolutionary history with the host organism; (IV) octocoral diseases; (V) how octocorals use their immune system to fight pathogens; (VI) microbiome regulation by the octocoral and its associated microbes; and (VII) the discovery of natural products with microbiome regulatory activities. -
Inventory and Atlas of Corals and Coral Reefs, with Emphasis on Deep-Water Coral Reefs from the U
Inventory and Atlas of Corals and Coral Reefs, with Emphasis on Deep-Water Coral Reefs from the U. S. Caribbean EEZ Jorge R. García Sais SEDAR26-RD-02 FINAL REPORT Inventory and Atlas of Corals and Coral Reefs, with Emphasis on Deep-Water Coral Reefs from the U. S. Caribbean EEZ Submitted to the: Caribbean Fishery Management Council San Juan, Puerto Rico By: Dr. Jorge R. García Sais dba Reef Surveys P. O. Box 3015;Lajas, P. R. 00667 [email protected] December, 2005 i Table of Contents Page I. Executive Summary 1 II. Introduction 4 III. Study Objectives 7 IV. Methods 8 A. Recuperation of Historical Data 8 B. Atlas map of deep reefs of PR and the USVI 11 C. Field Study at Isla Desecheo, PR 12 1. Sessile-Benthic Communities 12 2. Fishes and Motile Megabenthic Invertebrates 13 3. Statistical Analyses 15 V. Results and Discussion 15 A. Literature Review 15 1. Historical Overview 15 2. Recent Investigations 22 B. Geographical Distribution and Physical Characteristics 36 of Deep Reef Systems of Puerto Rico and the U. S. Virgin Islands C. Taxonomic Characterization of Sessile-Benthic 49 Communities Associated With Deep Sea Habitats of Puerto Rico and the U. S. Virgin Islands 1. Benthic Algae 49 2. Sponges (Phylum Porifera) 53 3. Corals (Phylum Cnidaria: Scleractinia 57 and Antipatharia) 4. Gorgonians (Sub-Class Octocorallia 65 D. Taxonomic Characterization of Sessile-Benthic Communities 68 Associated with Deep Sea Habitats of Puerto Rico and the U. S. Virgin Islands 1. Echinoderms 68 2. Decapod Crustaceans 72 3. Mollusks 78 E.