Molecular Identification and Nutrient Analysis of the Green Tide Species Ulva Ohnoi M
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Revision of Herbarium Specimens of Freshwater Enteromorpha-Like Ulva (Ulvaceae, Chlorophyta) Collected from Central Europe During the Years 1849–1959
Phytotaxa 218 (1): 001–029 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2015 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.218.1.1 Revision of herbarium specimens of freshwater Enteromorpha-like Ulva (Ulvaceae, Chlorophyta) collected from Central Europe during the years 849–959 ANDRZEJ S. RYBAK Department of Hydrobiology, Institute of Environmental Biology, Faculty of Biology, Adam Mickiewicz University, Umultowska 89, PL61 – 614 Poznań, Poland. [email protected] Abstract This paper presents results concerning the taxonomic revision of Ulva taxa originating from herbarium specimens dating back to 1849–1959. A staining and softening mixture was applied to allow a detailed morphometric analysis of thalli and cells and to detect many morphological details. The study focused on individuals collected exclusively from inland water ecosystems (having no contact with sea water). Detailed analysis concerned the following items: structures of thalli and cells, number of pyrenoids per cell, configuration of cells inside the thallus, occurrence or not of branching thallus, shapes of apical cells, and shape of chromatophores. The objective of the study was to confirm the initial identifications of specimens of Ulva held in herbaria. The study sought to determine whether saltwater species of the genus Ulva, e.g., Ulva compressa and U. intestinalis, could have been found in European freshwater ecosystems in 19th and 20th centuries. Moreover, the paper presents a method for the initial treatment of voucher specimens for viewing stained cellular structures that are extremely vulnerable to damage (the oldest specimens were more than 160 years old). -
University of Copenhagen
Classification, Naming and Evolutionary History of Glycosyltransferases from Sequenced Green and Red Algal Genomes Ulvskov, Peter; Paiva, Dionisio Soares; Domozych, David; Harholt, Jesper Published in: P L o S One DOI: 10.1371/journal.pone.0076511 Publication date: 2013 Document version Publisher's PDF, also known as Version of record Citation for published version (APA): Ulvskov, P., Paiva, D. S., Domozych, D., & Harholt, J. (2013). Classification, Naming and Evolutionary History of Glycosyltransferases from Sequenced Green and Red Algal Genomes. P L o S One, 8(10), [e76511.]. https://doi.org/10.1371/journal.pone.0076511 Download date: 02. okt.. 2021 Classification, Naming and Evolutionary History of Glycosyltransferases from Sequenced Green and Red Algal Genomes Peter Ulvskov1, Dionisio Soares Paiva1¤, David Domozych2, Jesper Harholt1* 1 Department of Plant and Environmental Sciences, University of Copenhagen, Frederiksberg C, Denmark, 2 Department of Biology and Skidmore Microscopy Imaging Center, Skidmore College, Saratoga Springs, New York, United States of America Abstract The Archaeplastida consists of three lineages, Rhodophyta, Virideplantae and Glaucophyta. The extracellular matrix of most members of the Rhodophyta and Viridiplantae consists of carbohydrate-based or a highly glycosylated protein-based cell wall while the Glaucophyte covering is poorly resolved. In order to elucidate possible evolutionary links between the three advanced lineages in Archaeplastida, a genomic analysis was initiated. Fully sequenced genomes from -
Exhaustive Reanalysis of Barcode Sequences from Public
Exhaustive reanalysis of barcode sequences from public repositories highlights ongoing misidentifications and impacts taxa diversity and distribution: a case study of the Sea Lettuce. Antoine Fort1, Marcus McHale1, Kevin Cascella2, Philippe Potin2, Marie-Mathilde Perrineau3, Philip Kerrison3, Elisabete da Costa4, Ricardo Calado4, Maria Domingues5, Isabel Costa Azevedo6, Isabel Sousa-Pinto6, Claire Gachon3, Adrie van der Werf7, Willem de Visser7, Johanna Beniers7, Henrice Jansen7, Michael Guiry1, and Ronan Sulpice1 1NUI Galway 2Station Biologique de Roscoff 3Scottish Association for Marine Science 4University of Aveiro 5Universidade de Aveiro 6University of Porto Interdisciplinary Centre of Marine and Environmental Research 7Wageningen University & Research November 24, 2020 Abstract Sea Lettuce (Ulva spp.; Ulvophyceae, Ulvales, Ulvaceae) is an important ecological and economical entity, with a worldwide distribution and is a well-known source of near-shore blooms blighting many coastlines. Species of Ulva are frequently misiden- tified in public repositories, including herbaria and gene banks, making species identification based on traditional barcoding hazardous. We investigated the species distribution of 295 individual distromatic foliose strains from the North East Atlantic by traditional barcoding or next generation sequencing. We found seven distinct species, and compared our results with all worldwide Ulva spp sequences present in the NCBI database for the three barcodes rbcL, tuf A and the ITS1. Our results demonstrate a large degree of species misidentification in the NCBI database. We estimate that 21% of the entries pertaining to foliose species are misannotated. In the extreme case of U. lactuca, 65% of the entries are erroneously labelled specimens of another Ulva species, typically U. fenestrata. In addition, 30% of U. -
Differentiation Between Some Ulva Spp. by Morphological, Genetic and Biochemical Analyses
Филогенетика Вавиловский журнал генетики и селекции. 2017;21(3):360367 ОРИГИНАЛЬНОЕ ИССЛЕДОВАНИЕ / ORIGINAL ARTICLE DOI 10.18699/VJ17.253 Differentiation between some Ulva spp. by morphological, genetic and biochemical analyses M.M. Ismail1 , S.E. Mohamed2 1 Marine Environmental Division, National Institute of Oceanography and Fisheries, Alexandria, Egypt 2 Department of Molecular Biology, Genetic Engineering and Biotechnology Research Institute, Sadat City University, Sadat City, Egypt Ulva is most common green seaweed in Egypt coast, it used as a Различия между некоторыми source of food, feed, medicines and fertilizers in all the world. This study is the first time to investigate the morphological, genetic видами рода Ulva, выявленные and biochemical variation within four Ulva species collected путем морфологического, from Eastern Harbor, Alexandria. The morphology description of генетического и биохимического thallus showed highly variations according to species, but there is not enough data to make differentiation between species in the анализа same genus since it is impacted with environmental factors and development stage of seaweeds. Genetic variations between the М.М. Исмаил1 , С.Э. Мохамед2 tested Ulva spp. were analyzed using random amplified polymor phic DNA (RAPD) analyses which shows that it would be possible 1 Отдел исследований морской среды Национального института to establish a unique fingerprint for individual seaweeds based on океанографии и рыболовства, Александрия, Египет 2 Отдел молекулярной биологии Исследовательского института the combined results generated from a small collection of prim генной инженерии и биотехнологий, Садатский университет, ers. The dendrogram showed that the most closely species are Садат, Египет U. lactuca and U. compressa, while, U. fasciata was far from both U. -
Using a Macroalgal Functional Form Approach to Assess the Level of Disturbance of Seagrass Meadows in Bahía of Nuevitas, Cuba (2000-2002)
American Journal of Plant Sciences, 2019, 10, 2020-2033 https://www.scirp.org/journal/ajps ISSN Online: 2158-2750 ISSN Print: 2158-2742 Using a Macroalgal Functional Form Approach to Assess the Level of Disturbance of Seagrass Meadows in Bahía of Nuevitas, Cuba (2000-2002) Rubén Cabrera1*, Jhoana Díaz-Larrea2, Schery Umanzor3, Laura Georgina Núñez García2 1Gabinete de Arqueologia,́ Oficina del Historiador de la Ciudad, Habana Vieja, Cuba 2Departamento de Hidrobiología, Universidad Autónoma Metropolitana-Iztapalapa, Mexico City, Mexico 3Department of Ecology & Evolutionary Biology, University of Connecticut, Stamford, CT, USA How to cite this paper: Cabrera, R., Abstract Díaz-Larrea, J., Umanzor, S. and García, L.G.N. (2019) Using a Macroalgal Func- A study on the spatial and seasonal variations of the associate macroalgae and tional Form Approach to Assess the Level epiphytes of Thalassia testudinum was carried out in Bahía de Nuevitas. Six- of Disturbance of Seagrass Meadows in ty-two species were identified: 3 Cyanophyta, 25 Chlorophyta, 8 Phaeophy- Bahía of Nuevitas, Cuba (2000-2002). American Journal of Plant Sciences, 10, ceae, 23 Rhodophyta and 3 Magnoliophyta, with two new records for Cuba 2020-2033. and 43 for the area. The differences in the specific composition of the ma- https://doi.org/10.4236/ajps.2019.1011142 croalgae communities are determined by a space component related to the Received: October 10, 2019 type of affectation in each area. The morpho-functional groups of macroalgae Accepted: November 18, 2019 in the station with more nutrient influence were mainly foliaceous and fila- Published: November 21, 2019 mentous. In the stations far from the city, the predominant morpho-types were the leathery and articulate calcareous indicators of lower nitrification Copyright © 2019 by author(s) and Scientific Research Publishing Inc. -
Comparison of Ulva Lactuca and Ulva Clathrata As Ingredients In
International Journal of Fisheries and Aquatic Studies 2021; 9(1): 192-194 E-ISSN: 2347-5129 P-ISSN: 2394-0506 (ICV-Poland) Impact Value: 5.62 Comparison of Ulva lactuca and Ulva clathrata as (GIF) Impact Factor: 0.549 IJFAS 2021; 9(1): 192-194 ingredients in Litopenaeus vannamei feeds © 2021 IJFAS www.fisheriesjournal.com Received: 23-10-2020 Dian Yuni Pratiwi and Fittrie Meyllianawaty Pratiwy Accepted: 02-12-2020 DOI: https://doi.org/10.22271/fish.2021.v9.i1c.2401 Dian Yuni Pratiwi Faculty of Fisheries and Marine Abstract Science, Universitas Ulva lactuca and Ulva clathrata are marine green algae belonging to genera Ulva. These algae have a lot Padjadjaran, Indonesia of nutrient such as protein, carbohydrates, lipids, pigments and others. These nutrient can be used to Fittrie Meyllianawaty Pratiwy improve the growth performance and health of Shrimps. Several studies have shown that U. lactuca and Faculty of Fisheries and Marine U. clathrata have antifungal, antibacterial, antiviral activities. One of popular shrimp among people of Science, Universitas the world is Litopenaeus vannamei. So that, this review article aims to comparing the effect of U. lactuca Padjadjaran, Indonesia and U. clathrata as ingredients in L. vannamei juvenile feeds. This review also summarizes a literature survey of the nutritional content and antimicrobial activity of U. lactuca and U. clathrata. Keywords: Ulva lactuca, Ulva clathrata, Litopenaeus vannamei, growth, health 1. Introduction Shrimps is one of popular seafood commodity among people of the world. The global trade of [1] [2] shrimp achieve 5.10 million tons in 2019 and estimate at USD 28 billion per year . -
Common Benthic Algae and Cyanobacteria in Southern California Tidal Wetlands
Scripps Institution of Oceanography Technical Report Common benthic algae and cyanobacteria in southern California tidal wetlands Christopher N. Janousek Scripps Institution of Oceanography, University of California, San Diego 11 July 2011 Janousek 2011: Algae and cyanobacteria of southern California marine wetlands. 1 Abstract Benthic algae and photosynthetic bacteria are important components of coastal wetlands, contributing to primary productivity, nutrient cycling, and other ecosystem functions. Despite their key roles in mudflat and salt marsh food webs, the extent and patterns of diversity of these organisms is poorly known. Sediments from intertidal marshes in San Diego County, California host a variety of cyanobacteria, diatoms, and multi-cellular algae. This flora describes approximately 40 taxa of common and notable cyanobacteria, microalgae and macroalgae observed in wetland sediments, principally from a small tidal marsh in Mission Bay. Cyanobacteria included coccoid and heterocyte and non-heterocyte bearing filamentous genera. A phylogenetically-diverse assemblage of pennate and centric diatoms, euglenoids, green algae, red algae, tribophytes and brown seaweeds was also observed. Most taxa are illustrated with photographs. Key words alpha diversity • cyanobacteria • diatoms • euglenoids • Kendall-Frost Mission Bay Marsh Reserve • macroalgae • microphytobenthos • salt marsh • Tijuana Estuary • Vaucheria Introduction The sediments of coastal marine wetlands in California are inhabited by a variety of algal and bacterial primary producers in addition to the more conspicuous vascular plants that provide most of the physical structure of coastal salt marshes and seagrass meadows. The non-vascular plant flora includes microscopic cyanobacteria, anoxygenic phototrophic bacteria, diatoms, and euglenoids, often collectively known as “microphytobenthos” (Sullivan and Currin 2000). Larger green algae, red and brown seaweeds, and the macroscopic tribophyte, Vaucheria are also residents of these ecosystems (Barnhardt et al. -
Successions of Phytobenthos Species in a Mediterranean Transitional Water System: the Importance of Long Term Observations
A peer-reviewed open-access journal Nature ConservationSuccessions 34: 217–246 of phytobenthos (2019) species in a Mediterranean transitional water system... 217 doi: 10.3897/natureconservation.34.30055 RESEARCH ARTICLE http://natureconservation.pensoft.net Launched to accelerate biodiversity conservation Successions of phytobenthos species in a Mediterranean transitional water system: the importance of long term observations Antonella Petrocelli1, Ester Cecere1, Fernando Rubino1 1 Water Research Institute (IRSA) – CNR, via Roma 3, 74123 Taranto, Italy Corresponding author: Antonella Petrocelli ([email protected]) Academic editor: A. Lugliè | Received 25 September 2018 | Accepted 28 February 2019 | Published 3 May 2019 http://zoobank.org/5D4206FB-8C06-49C8-9549-F08497EAA296 Citation: Petrocelli A, Cecere E, Rubino F (2019) Successions of phytobenthos species in a Mediterranean transitional water system: the importance of long term observations. In: Mazzocchi MG, Capotondi L, Freppaz M, Lugliè A, Campanaro A (Eds) Italian Long-Term Ecological Research for understanding ecosystem diversity and functioning. Case studies from aquatic, terrestrial and transitional domains. Nature Conservation 34: 217–246. https://doi.org/10.3897/ natureconservation.34.30055 Abstract The availability of quantitative long term datasets on the phytobenthic assemblages of the Mar Piccolo of Taranto (southern Italy, Mediterranean Sea), a lagoon like semi-enclosed coastal basin included in the Italian LTER network, enabled careful analysis of changes occurring in the structure of the community over about thirty years. The total number of taxa differed over the years. Thirteen non-indigenous species in total were found, their number varied over the years, reaching its highest value in 2017. The dominant taxa differed over the years. -
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E3S Web of Conferences 233, 02037 (2021) https://doi.org/10.1051/e3sconf/202123302037 IAECST 2020 Comparing Complete Mitochondrion Genome of Bloom-forming Macroalgae from the Southern Yellow Sea, China Jing Xia1, Peimin He1, Jinlin Liu1,*, Wei Liu1, Yichao Tong1, Yuqing Sun1, Shuang Zhao1, Lihua Xia2, Yutao Qin2, Haofei Zhang2, and Jianheng Zhang1,* 1College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, China, 201306 2East China Sea Environmental Monitoring Center, State Oceanic Administration, Shanghai, China, 201206 Abstract. The green tide in the Southern Yellow Sea which has been erupting continuously for 14 years. Dominant species of the free-floating Ulva in the early stage of macroalgae bloom were Ulva compressa, Ulva flexuosa, Ulva prolifera, and Ulva linza along the coast of Jiangsu Province. In the present study, we carried out comparative studies on complete mitochondrion genomes of four kinds of bloom-forming green algae, and provided standard morphological characteristic pictures of these Ulva species. The maximum likelihood phylogenetic analysis showed that U. linza is the closest sister species of U. prolifera. This study will be helpful in studying the genetic diversity and identification of Ulva species. 1 Introduction gradually [19]. Thus, it was meaningful to carry out comparative studies on organelle genomes of these Green tides, which occur widely in many coastal areas, bloom-forming green algae. are caused primarily by flotation, accumulation, and excessive proliferation of green macroalgae, especially the members of the genus Ulva [1-3]. China has the high 2 The specimen and data preparation frequency outbreak of the green tide [4-10]. Especially, In our previous studies, mitochondrion genome of U. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
bioRxiv preprint doi: https://doi.org/10.1101/668475; this version posted June 12, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, Pavel Škaloudf, Charles F. Delwicheg, Andrew H. Knollh, John A. Raveni,j,k, Heroen Verbruggene, Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2 Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, Krijgslaan 281, 9000 Ghent, Belgium bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium cVIB Center for Plant Systems Biology, Technologiepark 71, 9052 Zwijnaarde, Belgium dBioinformatics Institute Ghent, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium eSchool of Biosciences, University of Melbourne, Melbourne, Victoria, Australia fDepartment of Botany, Faculty of Science, Charles University, Benátská 2, CZ-12800 Prague 2, Czech Republic gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, 02138, USA. iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee, DD2 5DA, UK jSchool of Biological Sciences, University of Western Australia (M048), 35 Stirling Highway, WA 6009, Australia kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia lMeise Botanic Garden, Nieuwelaan 38, 1860 Meise, Belgium 1To whom correspondence may be addressed. Email [email protected], [email protected], [email protected] or [email protected]. -
Occurrence of Ulva Lactuca L. 1753 (Ulvaceae, Chlorophyta) at the Murman Сoast of the Barents Sea
POLAR RESEARCH 2018, VOL. 37, 1503912 https://doi.org/10.1080/17518369.2018.1503912 RESEARCH NOTE Occurrence of Ulva lactuca L. 1753 (Ulvaceae, Chlorophyta) at the Murman Сoast of the Barents Sea Svetlana Malavenda a, Mikhail Makarov a, Inna Ryzhik a, Maxim Mityaeva & Sergey Malavendab aLaboratory of Algology, Murmansk Marine Biological Institute, Murmansk, Russia; bDepartment of Biology, Murmansk State Technical University, Murmansk, Russia ABSTRACT KEYWORDS Findings of Ulva lactuca L. on the Murman Сoast of the Barents Sea are described for the Sea lettuce; seaweed; period 2009–2017. This species has not been found in this area for more than 50 years. The climate change; global occurrence of U. lactuca on the Murman Coast appears to be related to the recent warming of warming; Arctic; waters in the region. berealization Introduction Averintseva 1994; Šošina 2003; Zavalko & Šošina 2008) and even question the presence of this species The present study aims to give an overview on the in the Barents Sea. Analysis of these data indicates the distribution of Ulva lactuca Linnaeus 1753: 1163 instability of the presence of U. lactuca on the (Chlorophyta, Ulvaceae) in the Barents Sea. In the Murmansk coast. World Ocean, this species is very widespread In recent decades, temperatures in the Barents Sea (Guiry & Guiry 2018), found almost everywhere have risen following the increased inflow of Atlantic in shallow waters, including estuaries. The tem- water masses during spring (Matishov et al. 2009; perature and light tolerance of the species are well Matishov et al. 2014; MMBI 2017). It is possible studied. Photosynthesis has been observed at tem- that these water masses also brought spores, gametes peratures ranging from 0°C to 28°C (Lüning or zygotes of U. -
Advances in Biochemistry and Biotechnology
Advances in Biochemistry and Biotechnology van Ginneken V. Adv Biochem Biotechnol 2: 156. Research Article DOI: 10.29011/2574-7258.000056 Seaweed Biotechnology to Combat Desertification Vincent van Ginneken* Blue Green Technologies, Ginkelseweg, Heelum, Netherlands *Corresponding author: Vincent van Ginneken, Blue Green Technologies, Ginkelseweg 2, 6866 DZ Heelum, The Netherlands. Tel: +31638071180; Email: [email protected] Citation: van Ginneken V (2018) Seaweed Biotechnology to Combat Desertification. Adv Biochem Biotechnol 2: 156. DOI: 10.29011/2574-7258.000056 Received Date: 29 January, 2018; Accepted Date: 13 February, 2018; Published Date: 20 February, 2018 Abstract This paper presents biotechnological laboratory work on the successful isolation of protoplasts from the green seaweed species Ulva lactuca, an intertidal seaweed species from the moderate North Atlantic well known for its algae blooms and tremendous biomass production. We suggest a model to combat desertification and create new arable area by first -based on seaweed biotechnological techniques- create a special “Ulva-Desert” High-Temperature-Tolerance (HTT)-strain. This strain which is suitable for desert aquaculture could be obtained by protoplast fusion with the tropical heat resistant Ulva reticulata for which protoplasts with a temperature tolerance of 30°±1°C were recently isolated by the research group of Gupta et al. Seaweeds of the genus Ulva are well-known for their tremendous oceanic “seaweed-blooms” or “green-tides” of green biomass for which we hypothesize they will create appropriate sulfur gasses with main emphasis on volatile dimethyl sulfide [(CH3)2S] (DMS) and + - its precursor β-dimethylsulfonium propionate [(CH3)2 S CH2CH2COO ] (DMSP) which will following the sulfur cycle stimulate at the oceans cloud formation resulting in rainfall in the deserts and climate cooling.