Annual Report for the College of Marine Science Dean Jacqueline E. Dixon
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The Recent Molluscan Marine Fauna of the Islas Galápagos
THE FESTIVUS ISSN 0738-9388 A publication of the San Diego Shell Club Volume XXIX December 4, 1997 Supplement The Recent Molluscan Marine Fauna of the Islas Galapagos Kirstie L. Kaiser Vol. XXIX: Supplement THE FESTIVUS Page i THE RECENT MOLLUSCAN MARINE FAUNA OF THE ISLAS GALApAGOS KIRSTIE L. KAISER Museum Associate, Los Angeles County Museum of Natural History, Los Angeles, California 90007, USA 4 December 1997 SiL jo Cover: Adapted from a painting by John Chancellor - H.M.S. Beagle in the Galapagos. “This reproduction is gifi from a Fine Art Limited Edition published by Alexander Gallery Publications Limited, Bristol, England.” Anon, QU Lf a - ‘S” / ^ ^ 1 Vol. XXIX Supplement THE FESTIVUS Page iii TABLE OF CONTENTS INTRODUCTION 1 MATERIALS AND METHODS 1 DISCUSSION 2 RESULTS 2 Table 1: Deep-Water Species 3 Table 2: Additions to the verified species list of Finet (1994b) 4 Table 3: Species listed as endemic by Finet (1994b) which are no longer restricted to the Galapagos .... 6 Table 4: Summary of annotated checklist of Galapagan mollusks 6 ACKNOWLEDGMENTS 6 LITERATURE CITED 7 APPENDIX 1: ANNOTATED CHECKLIST OF GALAPAGAN MOLLUSKS 17 APPENDIX 2: REJECTED SPECIES 47 INDEX TO TAXA 57 Vol. XXIX: Supplement THE FESTIVUS Page 1 THE RECENT MOLLUSCAN MARINE EAUNA OE THE ISLAS GALAPAGOS KIRSTIE L. KAISER' Museum Associate, Los Angeles County Museum of Natural History, Los Angeles, California 90007, USA Introduction marine mollusks (Appendix 2). The first list includes The marine mollusks of the Galapagos are of additional earlier citations, recent reported citings, interest to those who study eastern Pacific mollusks, taxonomic changes and confirmations of 31 species particularly because the Archipelago is far enough from previously listed as doubtful. -
The Cephalopoda
Carl Chun THE CEPHALOPO PART I: OEGOPSIDA PART II: MYOPSIDA, OCTOPODA ATLAS Carl Chun THE CEPHALOPODA NOTE TO PLATE LXVIII Figure 7 should read Figure 8 Figure 9 should read Figure 7 GERMAN DEEPSEA EXPEDITION 1898-1899. VOL. XVIII SCIENTIFIC RESULTS QF THE GERMAN DEEPSEA EXPEDITION ON BOARD THE*STEAMSHIP "VALDIVIA" 1898-1899 Volume Eighteen UNDER THE AUSPICES OF THE GERMAN MINISTRY OF THE INTERIOR Supervised by CARL CHUN, Director of the Expedition Professor of Zoology , Leipzig. After 1914 continued by AUGUST BRAUER Professor of Zoology, Berlin Carl Chun THE CEPHALOPODA PART I: OEGOPSIDA PART II: MYOPSIDA, OCTOPODA ATLAS Translatedfrom the German ISRAEL PROGRAM FOR SCIENTIFIC TRANSLATIONS Jerusalem 1975 TT 69-55057/2 Published Pursuant to an Agreement with THE SMITHSONIAN INSTITUTION and THE NATIONAL SCIENCE FOUNDATION, WASHINGTON, D.C. Since the study of the Cephalopoda is a very specialized field with a unique and specific terminology and phrase- ology, it was necessary to edit the translation in a technical sense to insure that as accurate and meaningful a represen- tation of Chun's original work as possible would be achieved. We hope to have accomplished this responsibility. Clyde F. E. Roper and Ingrid H. Roper Technical Editors Copyright © 1975 Keter Publishing House Jerusalem Ltd. IPST Cat. No. 05452 8 ISBN 7065 1260 X Translated by Albert Mercado Edited by Prof. O. Theodor Copy-edited by Ora Ashdit Composed, Printed and Bound by Keterpress Enterprises, Jerusalem, Israel Available from the U. S. DEPARTMENT OF COMMERCE National Technical Information Service Springfield, Va. 22151 List of Plates I Thaumatolampas diadema of luminous o.rgans 95 luminous organ 145 n.gen.n.sp. -
Aspects of the Natural History of Pelagic Cephalopods of the Hawaiian Mesopelagic-Boundary Region 1
Pacific Science (1995), vol. 49, no. 2: 143-155 © 1995 by University of Hawai'i Press. All rights reserved Aspects of the Natural History of Pelagic Cephalopods of the Hawaiian Mesopelagic-Boundary Region 1 RICHARD EDWARD YOUNG 2 ABSTRACT: Pelagic cephalopods of the mesopelagic-boundary region in Hawai'i have proven difficult to sample but seem to occupy a variety ofhabitats within this zone. Abralia trigonura Berry inhabits the zone only as adults; A. astrosticta Berry may inhabit the inner boundary zone, and Pterygioteuthis giardi Fischer appears to be a facultative inhabitant. Three other mesopelagic species, Liocranchia reinhardti (Steenstrup), Chiroteuthis imperator Chun, and Iridoteuthis iris (Berry), are probable inhabitants; the latter two are suspected to be nonvertical migrants. The mesopelagic-boundary region also contains a variety of other pelagic cephalopods. Some are transients, common species of the mesopelagic zone in offshore waters such as Abraliopsis spp., neritic species such as Euprymna scolopes Berry, and oceanic epipelagic species such as Tremoctopus violaceus Chiaie and Argonauta argo Linnaeus. Others are appar ently permanent but either epipelagic (Onychoteuthis sp. C) or demersal (No totodarus hawaiiensis [Berry] and Haliphron atlanticus Steenstrup). Submersible observations show that Nototodarus hawaiiensis commonly "sits" on the bot tom and Haliphron atlanticus broods its young in the manner of some pelagic octopods. THE CONCEPT OF the mesopelagic-boundary over bottom depths of the same range. The region (m-b region) was first introduced by designation of an inner zone is based on Reid et al. (1991), although a general asso Reid'sfinding mesopelagic fishes resident there ciation of various mesopelagic animals with during both the day and night; mesopelagic land masses has been known for some time. -
Translation 3204
4 of 6 I' rÉ:1°.r - - - Ï''.ec.n::::,- - — TRANSLATION 3204 and Van, else--- de ,-0,- SERIES NO(S) ^4p €'`°°'°^^`m`^' TRANSLATION 3204 5 of 6 serceaesoe^nee SERIES NO.(S) serv,- i°- I' ann., Canada ° '° TRANSLATION 3204 6 of 6 SERIES NO(S) • =,-""r I FISHERIES AND MARINE SERVICE ARCHIVE:3 Translation Series No. 3204 Multidisciplinary investigations of the continental slope in the Gulf of Alaska area by Z.A. Filatova (ed.) Original title: Kompleksnyye issledovaniya materikovogo sklona v raione Zaliva Alyaska From: Trudy Instituta okeanologii im. P.P. ShirshoV (Publications of the P.P. Shirshov Oceanpgraphy Institute), 91 : 1-260, 1973 Translated by the Translation Bureau(HGC) Multilingual Services Division Department of the Secretary of State of Canada Department of the Environment Fisheries and Marine Service Pacific Biological Station Nanaimo, B.C. 1974 ; 494 pages typescriPt "DEPARTMENT OF THE SECRETARY OF STATE SECRÉTARIAT D'ÉTAT TRANSLATION BUREAU BUREAU DES TRADUCTIONS MULTILINGUAL SERVICES DIVISION DES SERVICES DIVISION MULTILINGUES ceÔ 'TRANSLATED FROM - TRADUCTION DE INTO - EN Russian English Ain HOR - AUTEUR Z. A. Filatova (ed.) ri TL E IN ENGLISH - TITRE ANGLAIS Multidisciplinary investigations of the continental slope in the Gulf of Aâaska ares TI TLE IN FORE I GN LANGuAGE (TRANS LI TERA TE FOREIGN CHARACTERS) TITRE EN LANGUE ÉTRANGÈRE (TRANSCRIRE EN CARACTÈRES ROMAINS) Kompleksnyye issledovaniya materikovogo sklona v raione Zaliva Alyaska. REFERENCE IN FOREI GN LANGUAGE (NAME: OF BOOK OR PUBLICATION) IN FULL. TRANSLI TERATE FOREIGN CHARACTERS, RÉFÉRENCE EN LANGUE ÉTRANGÈRE (NOM DU LIVRE OU PUBLICATION), AU COMPLET, TRANSCRIRE EN CARACTÈRES ROMAINS. Trudy Instituta okeanologii im. P.P. -
Defensive Behaviors of Deep-Sea Squids: Ink Release, Body Patterning, and Arm Autotomy
Defensive Behaviors of Deep-sea Squids: Ink Release, Body Patterning, and Arm Autotomy by Stephanie Lynn Bush A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Integrative Biology in the Graduate Division of the University of California, Berkeley Committee in Charge: Professor Roy L. Caldwell, Chair Professor David R. Lindberg Professor George K. Roderick Dr. Bruce H. Robison Fall, 2009 Defensive Behaviors of Deep-sea Squids: Ink Release, Body Patterning, and Arm Autotomy © 2009 by Stephanie Lynn Bush ABSTRACT Defensive Behaviors of Deep-sea Squids: Ink Release, Body Patterning, and Arm Autotomy by Stephanie Lynn Bush Doctor of Philosophy in Integrative Biology University of California, Berkeley Professor Roy L. Caldwell, Chair The deep sea is the largest habitat on Earth and holds the majority of its’ animal biomass. Due to the limitations of observing, capturing and studying these diverse and numerous organisms, little is known about them. The majority of deep-sea species are known only from net-caught specimens, therefore behavioral ecology and functional morphology were assumed. The advent of human operated vehicles (HOVs) and remotely operated vehicles (ROVs) have allowed scientists to make one-of-a-kind observations and test hypotheses about deep-sea organismal biology. Cephalopods are large, soft-bodied molluscs whose defenses center on crypsis. Individuals can rapidly change coloration (for background matching, mimicry, and disruptive coloration), skin texture, body postures, locomotion, and release ink to avoid recognition as prey or escape when camouflage fails. Squids, octopuses, and cuttlefishes rely on these visual defenses in shallow-water environments, but deep-sea cephalopods were thought to perform only a limited number of these behaviors because of their extremely low light surroundings. -
Vertical Distribution Patterns of Cephalopods in the Northern Gulf of Mexico
fmars-07-00047 February 20, 2020 Time: 15:34 # 1 ORIGINAL RESEARCH published: 21 February 2020 doi: 10.3389/fmars.2020.00047 Vertical Distribution Patterns of Cephalopods in the Northern Gulf of Mexico Heather Judkins1* and Michael Vecchione2 1 Department of Biological Sciences, University of South Florida St. Petersburg, St. Petersburg, FL, United States, 2 NMFS National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, DC, United States Cephalopods are important in midwater ecosystems of the Gulf of Mexico (GOM) as both predator and prey. Vertical distribution and migration patterns (both diel and ontogenic) are not known for the majority of deep-water cephalopods. These varying patterns are of interest as they have the potential to contribute to the movement of large amounts of nutrients and contaminants through the water column during diel migrations. This can be of particular importance if the migration traverses a discrete layer with particular properties, as happened with the deep-water oil plume located between 1000 and 1400 m during the Deepwater Horizon (DWH) oil spill. Two recent studies focusing on the deep-water column of the GOM [2011 Offshore Nekton Sampling and Edited by: Jose Angel Alvarez Perez, Analysis Program (ONSAP) and 2015–2018 Deep Pelagic Nekton Dynamics of the Gulf Universidade do Vale do Itajaí, Brazil of Mexico (DEEPEND)] program, produced a combined dataset of over 12,500 midwater Reviewed by: cephalopod records for the northern GOM region. We summarize vertical distribution Helena Passeri Lavrado, 2 Federal University of Rio de Janeiro, patterns of cephalopods from the cruises that utilized a 10 m Multiple Opening/Closing Brazil Net and Environmental Sensing System (MOC10). -
Ommastrephidae 199
click for previous page Decapodiformes: Ommastrephidae 199 OMMASTREPHIDAE Flying squids iagnostic characters: Medium- to Dlarge-sized squids. Funnel locking appara- tus with a T-shaped groove. Paralarvae with fused tentacles. Arms with biserial suckers. Four rows of suckers on tentacular clubs (club dactylus with 8 sucker series in Illex). Hooks never present hooks never on arms or clubs. One of the ventral pair of arms present usually hectocotylized in males. Buccal connec- tives attach to dorsal borders of ventral arms. Gladius distinctive, slender. funnel locking apparatus with Habitat, biology, and fisheries: Oceanic and T-shaped groove neritic. This is one of the most widely distributed and conspicuous families of squids in the world. Most species are exploited commercially. Todarodes pacificus makes up the bulk of the squid landings in Japan (up to 600 000 t annually) and may comprise at least 1/2 the annual world catch of cephalopods.In various parts of the West- ern Central Atlantic, 6 species of ommastrephids currently are fished commercially or for bait, or have a potential for exploitation. Ommastrephids are powerful swimmers and some species form large schools. Some neritic species exhibit strong seasonal migrations, wherein they occur in huge numbers in inshore waters where they are accessable to fisheries activities. The large size of most species (commonly 30 to 50 cm total length and up to 120 cm total length) and the heavily mus- cled structure, make them ideal for human con- ventral view sumption. Similar families occurring in the area Onychoteuthidae: tentacular clubs with claw-like hooks; funnel locking apparatus a simple, straight groove. -
Water Column Stratification Structures Viral Community Composition in the Sargasso Sea
Vol. 76: 85–94, 2015 AQUATIC MICROBIAL ECOLOGY Published online October 7 doi: 10.3354/ame01768 Aquat Microb Ecol OPEN ACCESS FEATURE ARTICLE Water column stratification structures viral community composition in the Sargasso Sea Dawn B. Goldsmith1, Jennifer R. Brum2,4, Max Hopkins1, Craig A. Carlson3, Mya Breitbart1,* 1College of Marine Science, University of South Florida, St. Petersburg, FL 33701, USA 2Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA 3Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA 93106-9620, USA 4Present address: Department of Microbiology, Ohio State University, Columbus, OH 43210, USA ABSTRACT: A decade-long study of viral abundance at the Bermuda Atlantic Time-series Study (BATS) site recently revealed an annually recurring pattern where viral abundance was fairly uniform in the well-mixed upper water column each winter, yet a subsurface peak in viral abundance between 60 and 100 m depth developed each summer during water column stratification (Parsons et al. 2012; ISME J 6:273–284). Building upon these findings, this study tests the hypothesis that in the well-mixed period (March), the viral communities at the surface and at 100 m depth are similar in composition, while during water column stratification (September), differences in the viruses occupying these 2 depths emerge. Amplification and sequencing of 3 signature genes (g23, phoH, and the ssDNA phage major capsid pro- Sargasso Sea viral communities at 0 and 100 m are similar tein) in addition to randomly amplified polymorphic in the well-mixed winter, but differ during summer water- DNA PCR gel banding patterns were used to assess column stratification. -
First Insight Into the Viral Community of the Cnidarian Model Metaorganism Aiptasia Using RNA-Seq Data
First insight into the viral community of the cnidarian model metaorganism Aiptasia using RNA-Seq data Jan D. Brüwer and Christian R. Voolstra Red Sea Research Center, Division of Biological and Environmental Science and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Makkah, Saudi Arabia ABSTRACT Current research posits that all multicellular organisms live in symbioses with asso- ciated microorganisms and form so-called metaorganisms or holobionts. Cnidarian metaorganisms are of specific interest given that stony corals provide the foundation of the globally threatened coral reef ecosystems. To gain first insight into viruses associated with the coral model system Aiptasia (sensu Exaiptasia pallida), we analyzed an existing RNA-Seq dataset of aposymbiotic, partially populated, and fully symbiotic Aiptasia CC7 anemones with Symbiodinium. Our approach included the selective removal of anemone host and algal endosymbiont sequences and subsequent microbial sequence annotation. Of a total of 297 million raw sequence reads, 8.6 million (∼3%) remained after host and endosymbiont sequence removal. Of these, 3,293 sequences could be assigned as of viral origin. Taxonomic annotation of these sequences suggests that Aiptasia is associated with a diverse viral community, comprising 116 viral taxa covering 40 families. The viral assemblage was dominated by viruses from the families Herpesviridae (12.00%), Partitiviridae (9.93%), and Picornaviridae (9.87%). Despite an overall stable viral assemblage, we found that some viral taxa exhibited significant changes in their relative abundance when Aiptasia engaged in a symbiotic relationship with Symbiodinium. Elucidation of viral taxa consistently present across all conditions revealed a core virome of 15 viral taxa from 11 viral families, encompassing many viruses previously reported as members of coral viromes. -
A Catalog of the Type-Specimens of Recent Cephalopoda in the National Museum of Natural History
A Catalog of the Type-Specimens of Recent Cephalopoda in the National Museum of Natural History CLYDE F. E. ROPER and MICHAEL J. SWEENEY SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 278 SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of "diffusing knowledge" was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Paleobiotogy Smithsonian Contributions to Zoology Smithsonian Studies in Air and Space Smithsonian Studies in History and Technology In these series, the Institution publishes small papers and full-scale monographs that report the research and collections of its various museums and bureaux or of professional colleagues in the world cf science and scholarship. The publications are distributed by mailing lists to libraries, universities, and similar institutions throughout the world. Papers or monographs submitted for series publication are received by the Smithsonian Institution Press, subject to its own review for format and style, only through departments of the various Smithsonian museums or bureaux, where the manuscripts are given substantive review. -
Broad Surveys of DNA Viral Diversity Obtained Through Viral Metagenomics of Mosquitoes
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Scholar Commons | University of South Florida Research University of South Florida Scholar Commons Marine Science Faculty Publications College of Marine Science 2011 Broad Surveys of DNA Viral Diversity Obtained through Viral Metagenomics of Mosquitoes Terry Fei Fan Ng University of South Florida Dana Willner San Diego State University Yan Wei Lim San Diego State University Robert Schmieder San Diego State University Betty Chau San Diego State University See next page for additional authors Follow this and additional works at: https://scholarcommons.usf.edu/msc_facpub Part of the Life Sciences Commons Scholar Commons Citation Ng, Terry Fei Fan; Willner, Dana; Lim, Yan Wei; Schmieder, Robert; Chau, Betty; Nilsson, Christina; Anthony, Simon; Ruan, Yijun; Rohwer, Forest; and Breitbart, Mya, "Broad Surveys of DNA Viral Diversity Obtained through Viral Metagenomics of Mosquitoes" (2011). Marine Science Faculty Publications. 741. https://scholarcommons.usf.edu/msc_facpub/741 This Article is brought to you for free and open access by the College of Marine Science at Scholar Commons. It has been accepted for inclusion in Marine Science Faculty Publications by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Authors Terry Fei Fan Ng, Dana Willner, Yan Wei Lim, Robert Schmieder, Betty Chau, Christina Nilsson, Simon Anthony, Yijun Ruan, Forest Rohwer, and Mya Breitbart This article is available at Scholar Commons: https://scholarcommons.usf.edu/msc_facpub/741 Broad Surveys of DNA Viral Diversity Obtained through Viral Metagenomics of Mosquitoes Terry Fei Fan Ng1¤, Dana L. -
Comparison of Size Selectivity Between Marine Mammals and Commercial Fisheries with Recommendations for Restructuring Management Policies
NOAA Technical Memorandum NMFS-AFSC-159 Comparison of Size Selectivity Between Marine Mammals and Commercial Fisheries with Recommendations for Restructuring Management Policies by M. A. Etnier and C. W. Fowler U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service Alaska Fisheries Science Center October 2005 NOAA Technical Memorandum NMFS The National Marine Fisheries Service's Alaska Fisheries Science Center uses the NOAA Technical Memorandum series to issue informal scientific and technical publications when complete formal review and editorial processing are not appropriate or feasible. Documents within this series reflect sound professional work and may be referenced in the formal scientific and technical literature. The NMFS-AFSC Technical Memorandum series of the Alaska Fisheries Science Center continues the NMFS-F/NWC series established in 1970 by the Northwest Fisheries Center. The NMFS-NWFSC series is currently used by the Northwest Fisheries Science Center. This document should be cited as follows: Etnier, M. A., and C. W. Fowler. 2005. Comparison of size selectivity between marine mammals and commercial fisheries with recommendations for restructuring management policies. U.S. Dep. Commer., NOAA Tech. Memo. NMFS-AFSC-159, 274 p. Reference in this document to trade names does not imply endorsement by the National Marine Fisheries Service, NOAA. NOAA Technical Memorandum NMFS-AFSC-159 Comparison of Size Selectivity Between Marine Mammals and Commercial Fisheries with Recommendations for Restructuring Management Policies by M. A. Etnier and C. W. Fowler Alaska Fisheries Science Center 7600 Sand Point Way N.E. Seattle, WA 98115 www.afsc.noaa.gov U.S. DEPARTMENT OF COMMERCE Carlos M.