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Plant-Microbe Symbioses: a Continuum from Commensalism to Parasitism
UCLA UCLA Previously Published Works Title Plant-microbe symbioses: A continuum from commensalism to parasitism Permalink https://escholarship.org/uc/item/6kx779h1 Journal Symbiosis, 37(1-3) ISSN 0334-5114 Author Hirsch, Ann M. Publication Date 2004 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Symbiosis, 37 (2004) xx–xx 1 Balaban, Philadelphia/Rehovot Review article. Plant-Microbe Symbioses: A Continuum from Commensalism to Parasitism ANN M. HIRSCH Department of Molecular, Cell, and Developmental Biology and Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA 90095-1606, USA, Tel. +1-310-206-8673, Fax. +1-310-206-5413, Email. [email protected] Received October 28, 2003; Accepted January 27, 2004 Abstract Photosynthetic organisms establish symbioses with a wide range of microorganisms. This review examines the diversity of symbiotic interactions, and proposes that there is a continuum from commensalism to mutualism to pathogenesis/parasitism in plant-microbe associations. The advantage of considering commensalism, mutualism, and pathogenesis/parasitism as a continuum rather than as discrete relationships between hosts and microbes, as they have been considered in the past, is that it will motivate us to focus more on common molecular mechanisms. Keywords: ?? 1. Introduction Plants establish mutualistic, often described as symbiotic, interactions with myriad organisms, both prokaryotic and eukaryotic. Some of the most prominent photosynthetic mutualisms are illustrated in Fig. 1. Although technically not a plant symbiosis, lichens are photosynthetic and represent an excellent example of a beneficial interaction (Fig. 1A). Presented at the 4th International Symbiosis Congress, August 17–23, 2003, Halifax, Canada 0334-5114/2004/$05.50 ©2004 Balaban 2 A.M. -
Mammal Species Native to the USA and Canada for Which the MIL Has an Image (296) 31 July 2021
Mammal species native to the USA and Canada for which the MIL has an image (296) 31 July 2021 ARTIODACTYLA (includes CETACEA) (38) ANTILOCAPRIDAE - pronghorns Antilocapra americana - Pronghorn BALAENIDAE - bowheads and right whales 1. Balaena mysticetus – Bowhead Whale BALAENOPTERIDAE -rorqual whales 1. Balaenoptera acutorostrata – Common Minke Whale 2. Balaenoptera borealis - Sei Whale 3. Balaenoptera brydei - Bryde’s Whale 4. Balaenoptera musculus - Blue Whale 5. Balaenoptera physalus - Fin Whale 6. Eschrichtius robustus - Gray Whale 7. Megaptera novaeangliae - Humpback Whale BOVIDAE - cattle, sheep, goats, and antelopes 1. Bos bison - American Bison 2. Oreamnos americanus - Mountain Goat 3. Ovibos moschatus - Muskox 4. Ovis canadensis - Bighorn Sheep 5. Ovis dalli - Thinhorn Sheep CERVIDAE - deer 1. Alces alces - Moose 2. Cervus canadensis - Wapiti (Elk) 3. Odocoileus hemionus - Mule Deer 4. Odocoileus virginianus - White-tailed Deer 5. Rangifer tarandus -Caribou DELPHINIDAE - ocean dolphins 1. Delphinus delphis - Common Dolphin 2. Globicephala macrorhynchus - Short-finned Pilot Whale 3. Grampus griseus - Risso's Dolphin 4. Lagenorhynchus albirostris - White-beaked Dolphin 5. Lissodelphis borealis - Northern Right-whale Dolphin 6. Orcinus orca - Killer Whale 7. Peponocephala electra - Melon-headed Whale 8. Pseudorca crassidens - False Killer Whale 9. Sagmatias obliquidens - Pacific White-sided Dolphin 10. Stenella coeruleoalba - Striped Dolphin 11. Stenella frontalis – Atlantic Spotted Dolphin 12. Steno bredanensis - Rough-toothed Dolphin 13. Tursiops truncatus - Common Bottlenose Dolphin MONODONTIDAE - narwhals, belugas 1. Delphinapterus leucas - Beluga 2. Monodon monoceros - Narwhal PHOCOENIDAE - porpoises 1. Phocoena phocoena - Harbor Porpoise 2. Phocoenoides dalli - Dall’s Porpoise PHYSETERIDAE - sperm whales Physeter macrocephalus – Sperm Whale TAYASSUIDAE - peccaries Dicotyles tajacu - Collared Peccary CARNIVORA (48) CANIDAE - dogs 1. Canis latrans - Coyote 2. -
Inventory of Mammals at Walnut Canyon, Wupatki, and Sunset Crater National Monuments
National Park Service U.S. Department of the Interior Natural Resource Program Center Inventory of Mammals at Walnut Canyon, Wupatki, and Sunset Crater National Monuments Natural Resource Technical Report NPS/SCPN/NRTR–2009/278 ON THE COVER: Top: Wupatki National Monument; bottom left: bobcat (Lynx rufus); bottom right: Wupatki pocket mouse (Perogna- thus amplus cineris) at Wupatki National Monument. Photos courtesy of U.S. Geological Survey/Charles Drost. Inventory of Mammals at Walnut Canyon, Wupatki, and Sunset Crater National Monuments Natural Resource Technical Report NPS/SCPN/NRTR—2009/278 Author Charles Drost U.S. Geological Survey Southwest Biological Science Center 2255 N. Gemini Drive Flagstaff, AZ 86001 Editing and Design Jean Palumbo National Park Service, Southern Colorado Plateau Network Northern Arizona University Flagstaff, Arizona December 2009 U.S. Department of the Interior National Park Service Natural Resource Program Center Fort Collins, Colorado The National Park Service, Natural Resource Program Center publishes a range of reports that address natural resource topics of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Technical Report Series is used to disseminate results of scientific studies in the physical, biological, and social sciences for both the advancement of science and the achievement of the National Park Service mission. The series provides contributors with a forum for displaying comprehensive data that are often deleted from journals because of page limitations. All manuscripts in the series receive the appropriate level of peer review to ensure that the information is scientifically credible, technically accurate, appropriately written for the intended audience, and designed and published in a professional manner. -
Symbiotic Relationship in Which One Organism Benefits and the Other Is Unaffected
Ecology Quiz Review – ANSWERS! 1. Commensalism – symbiotic relationship in which one organism benefits and the other is unaffected. Mutualism – symbiotic relationship in which both organisms benefit. Parasitism – symbiotic relationship in which one organism benefits and the other is harmed or killed. Predation – a biological interaction where a predator feeds on a prey. 2A. Commensalism B. Mutualism C. Parasitism D. Predation 3. Autotrophic organisms produce their own food by way of photosynthesis. They are also at the base of a food chain or trophic pyramid. 4. Answer will vary – You will need two plants, two herbivores, and two carnivores 5. Decreases. Only 10% of the energy available at one level is passed to the next level. 6. If 10,000 units of energy are available to the grass at the bottom of the food chain, only 1000 units of energy will be available to the primary consumer, and only 100 units will be available to the secondary consumer. 7. Population is the number of a specific species living in an area. 8. B – All members of the Turdis migratorius species. 9. The number of secondary consumers would increase. 10. The energy decreases as you move up the pyramid which is indicated by the pyramid becoming smaller near the top. 11. Second highest-level consumer would increase. 12. Primary consumer would decrease due to higher numbers of secondary consumer. 13. The number of organisms would decrease due to the lack of food for primary consumers. Other consumers would decrease as the numbers of their food source declined. 14. Number of highest-level consumers would decrease due to lack of food. -
Life History Account for Desert Woodrat
California Wildlife Habitat Relationships System California Department of Fish and Wildlife California Interagency Wildlife Task Group DESERT WOODRAT Neotoma lepida Family: MURIDAE Order: RODENTIA Class: MAMMALIA M126 Written by: P. Brylski Reviewed by: H. Shellhammer Edited by: R. Duke Updated by: CWHR Program Staff, February 2008 DISTRIBUTION, ABUNDANCE, AND SEASONALITY The desert woodrat occurs in California in 2 disjunct areas. It is found in northeastern California in Great Basin areas of eastern Modoc Co. to southeastern Lassen Co. Inhabits virtually all of southern California, with range extending northward along the coast to Monterey Co., and along the Coast Range to San Francisco Bay. In southeastern California, found from southern Mono Co. south throughout the Mojave Desert and from north-central Tulare Co. south through the Tehachapi and San Bernardino Mts. Common to abundant in Joshua tree, pinyon-juniper, mixed and chamise-redshank chaparral, sagebrush, and most desert habitats. Also found in a variety of other habitats. Most abundant in rocky areas with Joshua trees. Elevational range from sea level to 2600 m (8500 ft). Northern and elevational distribution may be limited by temperature (Lee 1963, MacMillen 1964). SPECIFIC HABITAT REQUIREMENTS Feeding: Eats buds, fruits, seeds, bark, leaves, and young shoots of many plant species. In coastal scrub, prefers live oak, chamise, and buckwheat as food plants (Meserve 1974). Creosote, cholla, and prickly-pear are eaten in the Mojave Desert (MacMillen 1964, Cameron and Rainey 1972). In juniper/sagebrush habitats, ate Mormon-tea, rattlesnake weed, mustard, sagebrush, and buckwheat (Stones and Hayward 1968). Cover: Houses are constructed with twigs, sticks, cactus parts, rocks, depending on availability of building materials. -
Pack Rats (Neotoma Spp.): Keystone Ecological Engineers?
Journal of Arid Environments 74 (2010) 1450e1455 Contents lists available at ScienceDirect Journal of Arid Environments journal homepage: www.elsevier.com/locate/jaridenv Pack rats (Neotoma spp.): Keystone ecological engineers? Walter G. Whitford a, Yosef Steinberger b,* a USDA-ARS Jornada Experimental Range, MSC 3JER, New Mexico State University, Las Cruces, NM 88003, USA b The Mina & Everard Goodman, The Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 52900, Israel article info abstract Article history: The potential role of two species of pack rats (Neotoma albigula and Neotoma micropus) as keystone Received 8 December 2009 ecological engineers was examined by estimating the species diversity of invertebrates living in the nest Received in revised form middens, and nitrogen mineralization rates in soils associated with the middens. Although pack-rat 15 April 2010 middens in tarbush (Flourensia cernua) shrublands were smaller than those in creostebush (Larrea tri- Accepted 21 May 2010 dentata) shrublands, they housed a higher abundance and diversity of arthropods. The Neotoma spp. Available online 15 June 2010 middens were an important microhabitat for crickets (Gryllus sp.), wolf spiders (Lycosa spp.), and lycid beetle larvae (Lycidae) in all of the shrub habitats. There were five arthropod taxa that occupied all Keywords: Habitat middens in the creosote-bush shrubland, and 12 arthropod taxa that occupied all middens in the tarbush fi Mineralization shrubland. Soils associated with pack-rat middens had signi cantly higher soil organic-matter content Species diversity than reference soils. Nitrogen mineralization was significantly higher in soils associated with pack-rat Stick nest middens than in reference soils. -
Adaptations for Survival: Symbioses, Camouflage
Adaptations for Survival: Symbioses, Camouflage & Mimicry OCN 201 Biology Lecture 11 http://www.oceanfootage.com/stockfootage/Cleaning_Station_Fish/ http://www.berkeley.edu/news/media/releases/2005/03/24_octopus.shtml Symbiosis • Parasitism - negative effect on host • Commensalism - no effect on host • Mutualism - both parties benefit Often involves food but benefits may also include protection from predators, dispersal, or habitat Parasites Leeches (Segmented Worms) Tongue Louse (Crustacean) Nematodes (Roundworms) Whale Barnacles & Lice Commensalism or Parasitism? Commensalism or Mutualism? http://magma.nationalgeographic.com/ http://www.scuba-equipment-usa.com/marine/APR04/ Mutualism Cleaner Shrimp http://magma.nationalgeographic.com/ Anemone Hermit Crab http://www.scuba-equipment-usa.com/marine/APR04/ Camouflage Countershading Sharks Birds Countershading coloration of the Caribbean reef shark © George Ryschkewitsch Fish JONATHAN CHESTER Mammals shiftingbaselines.org/blog/big_tuna.jpg http://www.nmfs.noaa.gov/pr/images/cetaceans/orca_spyhopping-noaa.jpg Adaptive Camouflage Camouflage http://www.cspangler.com/images/photos/aquarium/weedy-sea-dragon2.jpg Camouflage by Mimicry Mimicry • Batesian: an edible species evolves to look similar to an inedible species to avoid predation • Mullerian: two or more inedible species all evolve to look similar maximizing efficiency with which predators learn to avoid them Batesian Mimicry An edible species evolves to resemble an inedible species to avoid predators Pufferfish (poisonous) Filefish (non-poisonous) -
This Process Wherein 2 Organisms Help One Another Is Often Called Symbiosis Or Mutualism
This process wherein 2 organisms help one another is often called symbiosis or mutualism. The terms are often used interchangeably. Technically, mutualism is an ecological interaction between at least two species (=partners) where both partners benefit from the relationship. Symbiosis on the other hand is defined as an ecological interaction between at least two species (=partners) where there is persistent contact between the partners. Coral is an extremely important habitat. Coral is an animal which has a dinoflagellate living in it called Zooxanthellae You can see where the Zooxanthellae live in the coral and these provide oxygen to the coral which provides protection to the Zooxanthellae If the coral is stressed, the Zooxanthellae leave the coral and the coral becomes “bleached” and may die if the Zooxanthellae do not return. Fish have evolved so that the coral provides them with a kind of “background” against which they become harder for predators to see them WORMS Several different phyla Nematodes, Platyhelminthes, annelids etc) . Some people do eat worms but several kinds are parasitic and there are dangers in doing this. Many marine animals will eat worms. ECHINODERMS Some examples: Star fish, sea cucumbers, crinoids Possible to eat, but not much meat! More likely eaten by other animals. Interesting regenerative powers. ARTHROPODS (joint legged animals) Some examples: Crabs, lobsters and so on. Some are edible. Insects are arthropods and many people in the world eat them. Horseshoe crabs, are here too but are more closely related to the spiders than to the crabs proper. Lobster crab Barnacles Horseshoe crab MOLLUSKS Examples: Clams, mussels , snails Clams and other mollusks are regularly eaten around the world. -
The Ecology of Mutualism
Annual Reviews www.annualreviews.org/aronline AngRev. Ecol. Syst. 1982.13:315--47 Copyright©1982 by Annual Reviews lnc. All rightsreserved THE ECOLOGY OF MUTUALISM Douglas 1t. Boucher Departementdes sciences biologiques, Universit~ du Quebec~ Montreal, C. P. 8888, Suet. A, Montreal, Quebec, CanadaH3C 3P8 Sam James Departmentof Ecologyand Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA48109 Kathleen H. Keeler School of Life Sciences, University of Nebraska,Lincoln, Nebraska,USA 68588 INTRODUCTION Elementaryecology texts tell us that organismsinteract in three fundamen- tal ways, generally given the namescompetition, predation, and mutualism. The third memberhas gotten short shrift (264), and even its nameis not generally agreed on. Terms that may be considered synonyms,in whole or part, are symbiosis, commensalism,cooperation, protocooperation, mutual aid, facilitation, reciprocal altruism, and entraide. Weuse the term mutual- by University of Kanas-Lawrence & Edwards on 09/26/05. For personal use only. ism, defined as "an interaction betweenspecies that is beneficial to both," Annu. Rev. Ecol. Syst. 1982.13:315-347. Downloaded from arjournals.annualreviews.org since it has both historical priority (311) and general currency. Symbiosis is "the living together of two organismsin close association," and modifiers are used to specify dependenceon the interaction (facultative or obligate) and the range of species that can take part (oligophilic or polyphilic). We make the normal apologies concerning forcing continuous variation and diverse interactions into simple dichotomousclassifications, for these and all subsequentdefinitions. Thus mutualism can be defined, in brief, as a -b/q- interaction, while competition, predation, and eommensalismare respectively -/-, -/q-, and -t-/0. There remains, however,the question of howto define "benefit to the 315 0066-4162/82/1120-0315 $02.00 Annual Reviews www.annualreviews.org/aronline 316 BOUCHER, JAMES & KEELER species" without evoking group selection. -
Bio112 Home Work Community Structure
Name: Date: Bio112 Home Work Community Structure Multiple Choice Identify the choice that best completes the statement or answers the question. ____ 1. All of the populations of different species that occupy and are adapted to a given habitat are referred to by which term? a. biosphere b. community c. ecosystem d. niche e. ecotone ____ 2. Niche refers to the a. home range of an animal. b. preferred habitat for an organism. c. functional role of a species in a community. d. territory occupied by a species. e. locale in which a species lives. ____ 3. A relationship in which benefits flow both ways between the interacting species is a. a neutral relationship. b. commensalism. c. competitive exclusion. d. mutualism. e. parasitism. ____ 4. A one-way relationship in which one species benefits and directly hurts the other is called a. commensalism. b. competitive exclusion. c. parasitism. d. obligate mutualism. e. neutral relationship. ____ 5. The interaction in which one species benefits and the second species is neither harmed nor benefited is a. mutualism. b. parasitism. c. commensalism. d. competition. e. predation. ____ 6. The interaction between two species in which one species benefits and the other species is harmed is a. mutualism. b. commensalism. c. competition. d. predation. e. none of these ____ 7. The relationship between the yucca plant and the yucca moth that pollinates it is best described as a. camouflage. b. commensalism. c. competitive exclusion. d. mutualism. e. all of these Name: Date: ____ 8. Competitive exclusion is the result of a. mutualism. b. commensalism. -
Reticulate Evolution Everywhere
Reticulate Evolution Everywhere Nathalie Gontier Abstract Reticulation is a recurring evolutionary pattern found in phylogenetic reconstructions of life. The pattern results from how species interact and evolve by mechanisms and processes including symbiosis; symbiogenesis; lateral gene transfer (that occurs via bacterial conjugation, transformation, transduction, Gene Transfer Agents, or the movements of transposons, retrotransposons, and other mobile genetic elements); hybridization or divergence with gene flow; and infec- tious heredity (induced either directly by bacteria, bacteriophages, viruses, pri- ons, protozoa and fungi, or via vectors that transmit these pathogens). Research on reticulate evolution today takes on inter- and transdisciplinary proportions and is able to unite distinct research fields ranging from microbiology and molecular genetics to evolutionary biology and the biomedical sciences. This chapter sum- marizes the main principles of the diverse reticulate evolutionary mechanisms and situates them into the chapters that make up this volume. Keywords Reticulate evolution · Symbiosis · Symbiogenesis · Lateral Gene Transfer · Infectious agents · Microbiome · Viriome · Virolution · Hybridization · Divergence with gene flow · Evolutionary patterns · Extended Synthesis 1 Reticulate Evolution: Patterns, Processes, Mechanisms According to the Online Etymology Dictionary (http://www.etymonline.com), the word reticulate is an adjective that stems from the Latin words “re¯ticulātus” (having a net-like pattern) and re¯ticulum (little net). When scholars identify the evolution of life as being “reticulated,” they first and foremost refer to a recurring evolutionary pattern. N. Gontier (*) AppEEL—Applied Evolutionary Epistemology Lab, University of Lisbon, Lisbon, Portugal e-mail: [email protected] © Springer International Publishing Switzerland 2015 1 N. Gontier (ed.), Reticulate Evolution, Interdisciplinary Evolution Research 3, DOI 10.1007/978-3-319-16345-1_1 2 N. -
Nocturnal Rodents
Nocturnal Rodents Peter Holm Objectives (Chaetodipus spp. and Perognathus spp.) and The monitoring protocol handbook (Petryszyn kangaroo rats (Dipodomys spp.) belong to the 1995) states: “to document general trends in family Heteromyidae (heteromyids), while the nocturnal rodent population size on an annual white-throated woodrats (Neotoma albigula), basis across a representative sample of habitat Arizona cotton rat (Sigmodon arizonae), cactus types present in the monument”. mouse (Peromyscus eremicus), and grasshopper mouse (Onychomys torridus), belong to the family Introduction Muridae. Sigmodon arizonae, a native riparian Nocturnal rodents constitute the prey base for species relatively new to OPCNM, has been many snakes, owls, and carnivorous mammals. recorded at the Dos Lomitas and Salsola EMP All nocturnal rodents, except for the grasshopper sites, adjacent to Mexican agricultural fields. mouse, are primary consumers. Whereas Botta’s pocket gopher (Thomomys bottae) is the heteromyids constitute an important guild lone representative of the family Geomyidae. See of granivores, murids feed primarily on fruit Petryszyn and Russ (1996), Hoffmeister (1986), and foliage. Rodents are also responsible for Petterson (1999), Rosen (2000), and references considerable excavation and mixing of soil layers therein, for a thorough review. (bioturbation), “predation” on plants and seeds, as well as the dispersal and caching of plant seeds. As part of the Sensitive Ecosystems Project, Petryszyn and Russ (1996) conducted a baseline Rodents are common in all monument habitats, study originally titled, Special Status Mammals are easily captured and identified, have small of Organ Pipe Cactus National Monument. They home ranges, have high fecundity, and respond surveyed for nocturnal rodents and other quickly to changes in primary productivity and mammals in various habitats throughout the disturbance (Petryszyn 1995, Petryszyn and Russ monument and found that murids dominated 1996, Petterson 1999).