Allelopathy of Wild Mushrooms—An Important Factor for Assessing Forest Ecosystems in Japan
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Covered in Phylloboletellus and Numerous Clamps in Boletellus Fibuliger
PERSOONIA Published by the Rijksherbarium, Leiden Volume 11, Part 3, pp. 269-302 (1981) Notes on bolete taxonomy—III Rolf Singer Field Museum of Natural History, Chicago, U.S.A. have Contributions involving bolete taxonomy during the last ten years not only widened the knowledge and increased the number of species in the boletes and related lamellate and gastroid forms, but have also introduced a large number of of new data on characters useful for the generic and subgeneric taxonomy these is therefore timely to fungi,resulting, in part, in new taxonomical arrangements. It consider these new data with a view to integratingthem into an amended classifi- cation which, ifit pretends to be natural must take into account all observations of possible diagnostic value. It must also take into account all sufficiently described species from all phytogeographic regions. 1. Clamp connections Like any other character (including the spore print color), the presence or absence ofclamp connections in is neither in of the carpophores here nor other groups Basidiomycetes necessarily a generic or family character. This situation became very clear when occasional clamps were discovered in Phylloboletellus and numerous clamps in Boletellus fibuliger. Kiihner (1978-1980) rightly postulates that cytology and sexuality should be considered wherever at all possible. This, as he is well aware, is not feasible in most boletes, and we must be content to judgeclamp-occurrence per se, giving it importance wherever associated with other characters and within a well circumscribed and obviously homogeneous group such as Phlebopus, Paragyrodon, and Gyrodon. (Heinemann (1954) and Pegler & Young this is (1981) treat group on the family level.) Gyroporus, also clamp-bearing, considered close, but somewhat more removed than the other genera. -
Phylogenetic Overview of Aureoboletus (Boletaceae, Boletales), with Descriptions of Six New Species from China
A peer-reviewed open-access journal MycoKeys 61: 111–145 (2019) The Aureoboletus in China 111 doi: 10.3897/mycokeys.61.47520 REVIEW ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Phylogenetic overview of Aureoboletus (Boletaceae, Boletales), with descriptions of six new species from China Ming Zhang1, Tai-Hui Li1, Chao-Qun Wang1, Nian-Kai Zeng2, Wang-Qiu Deng1 1 State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China 2 Department of Pharmacy, Hainan Medical University, Haikou 571101, China Corresponding author: Tai-Hui Li ([email protected]) Academic editor: M. P. Martín | Received 23 October 2019 | Accepted 29 November 2019 | Published 17 December 2019 Citation: Zhang M, Li T-H, Wang C-Q, Zeng N-K, Deng W-Q (2019)Phylogenetic overview of Aureoboletus (Boletaceae, Boletales), with descriptions of six new species from China. MycoKeys 61: 111–145. https://doi. org/10.3897/mycokeys.61.47520 Abstract In this study, species relationships of the genus Aureoboletus were studied, based on both morphological characteristics and a four-gene (nrLSU, tef1-a, rpb1 and rpb2) phylogenetic inference. Thirty-five species of the genus have been revealed worldwide, forming eight major clades in the phylogenetic tree, of which twenty-four species have been found in China, including six new species: A. glutinosus, A. griseorufescens, A. raphanaceus, A. sinobadius, A. solus, A. velutipes and a new combination A. miniatoaurantiacus (Bi & Loh) Ming Zhang, N.K. Zeng & T.H. Li proposed here. -
Conservation of Ectomycorrhizal Fungi: Exploring the Linkages Between Functional and Taxonomic Responses to Anthropogenic N Deposition
fungal ecology 4 (2011) 174e183 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/funeco Conservation of ectomycorrhizal fungi: exploring the linkages between functional and taxonomic responses to anthropogenic N deposition E.A. LILLESKOVa,*, E.A. HOBBIEb, T.R. HORTONc aUSDA Forest Service, Northern Research Station, Forestry Sciences Laboratory, Houghton, MI 49931, USA bComplex Systems Research Center, University of New Hampshire, Durham, NH 03833, USA cState University of New York, College of Environmental Science and Forestry, Department of Environmental and Forest Biology, 246 Illick Hall, 1 Forestry Drive, Syracuse, NY 13210, USA article info abstract Article history: Anthropogenic nitrogen (N) deposition alters ectomycorrhizal fungal communities, but the Received 12 April 2010 effect on functional diversity is not clear. In this review we explore whether fungi that Revision received 9 August 2010 respond differently to N deposition also differ in functional traits, including organic N use, Accepted 22 September 2010 hydrophobicity and exploration type (extent and pattern of extraradical hyphae). Corti- Available online 14 January 2011 narius, Tricholoma, Piloderma, and Suillus had the strongest evidence of consistent negative Corresponding editor: Anne Pringle effects of N deposition. Cortinarius, Tricholoma and Piloderma display consistent protein use and produce medium-distance fringe exploration types with hydrophobic mycorrhizas and Keywords: rhizomorphs. Genera that produce long-distance exploration types (mostly Boletales) and Conservation biology contact short-distance exploration types (e.g., Russulaceae, Thelephoraceae, some athe- Ectomycorrhizal fungi lioid genera) vary in sensitivity to N deposition. Members of Bankeraceae have declined in Exploration types Europe but their enzymatic activity and belowground occurrence are largely unknown. -
<I>Hydropus Mediterraneus</I>
ISSN (print) 0093-4666 © 2012. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/121.393 Volume 121, pp. 393–403 July–September 2012 Laccariopsis, a new genus for Hydropus mediterraneus (Basidiomycota, Agaricales) Alfredo Vizzini*, Enrico Ercole & Samuele Voyron Dipartimento di Scienze della Vita e Biologia dei Sistemi - Università degli Studi di Torino, Viale Mattioli 25, I-10125, Torino, Italy *Correspondence to: [email protected] Abstract — Laccariopsis (Agaricales) is a new monotypic genus established for Hydropus mediterraneus, an arenicolous species earlier often placed in Flammulina, Oudemansiella, or Xerula. Laccariopsis is morphologically close to these genera but distinguished by a unique combination of features: a Laccaria-like habit (distant, thick, subdecurrent lamellae), viscid pileus and upper stipe, glabrous stipe with a long pseudorhiza connecting with Ammophila and Juniperus roots and incorporating plant debris and sand particles, pileipellis consisting of a loose ixohymeniderm with slender pileocystidia, large and thin- to thick-walled spores and basidia, thin- to slightly thick-walled hymenial cystidia and caulocystidia, and monomitic stipe tissue. Phylogenetic analyses based on a combined ITS-LSU sequence dataset place Laccariopsis close to Gloiocephala and Rhizomarasmius. Key words — Agaricomycetes, Physalacriaceae, /gloiocephala clade, phylogeny, taxonomy Introduction Hydropus mediterraneus was originally described by Pacioni & Lalli (1985) based on collections from Mediterranean dune ecosystems in Central Italy, Sardinia, and Tunisia. Previous collections were misidentified as Laccaria maritima (Theodor.) Singer ex Huhtinen (Dal Savio 1984) due to their laccarioid habit. The generic attribution to Hydropus Kühner ex Singer by Pacioni & Lalli (1985) was due mainly to the presence of reddish watery droplets on young lamellae and sarcodimitic tissue in the stipe (Corner 1966, Singer 1982). -
Genome Sequence Analysis of Auricularia Heimuer Combined with Genetic Linkage Map
Journal of Fungi Article Genome Sequence Analysis of Auricularia heimuer Combined with Genetic Linkage Map Ming Fang 1, Xiaoe Wang 2, Ying Chen 2, Peng Wang 2, Lixin Lu 2, Jia Lu 2, Fangjie Yao 1,2,* and Youmin Zhang 1,* 1 Lab of genetic breeding of edible mushromm, Horticultural, College of Horticulture, Jilin Agricultural University, Changchun 130118, China; [email protected] 2 Engineering Research Centre of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun 130118, China; [email protected] (X.W.); [email protected] (Y.C.); [email protected] (P.W.); [email protected] (L.L.); [email protected] (J.L.) * Correspondence: [email protected] (F.Y.); [email protected] (Y.Z.) Received: 3 March 2020; Accepted: 12 March 2020; Published: 16 March 2020 Abstract: Auricularia heimuer is one of the most popular edible fungi in China. In this study, the whole genome of A. heimuer was sequenced on the Illumina HiSeq X system and compared with other mushrooms genomes. As a wood-rotting fungus, a total of 509 carbohydrate-active enzymes (CAZymes) were annotated in order to explore its potential capabilities on wood degradation. The glycoside hydrolases (GH) family genes in the A. heimuer genome were more abundant than the genes in the other 11 mushrooms genomes. The A. heimuer genome contained 102 genes encoding class III, IV, and V ethanol dehydrogenases. Evolutionary analysis based on 562 orthologous single-copy genes from 15 mushrooms showed that Auricularia formed an early independent branch of Agaricomycetes. The mating-type locus of A. heimuer was located on linkage group 8 by genetic linkage analysis. -
Molecular Phylogenetic Studies in the Genus Amanita
1170 Molecular phylogenetic studies in the genus Amanita I5ichael Weiß, Zhu-Liang Yang, and Franz Oberwinkler Abstracl A group of 49 Amanita species that had been thoroughly examined morphologically and amtomically was analyzed by DNA sequence compadson to estimate natural groups and phylogenetic rclationships within the genus. Nuclear DNA sequences coding for a part of the ribosomal large subunit were determined and evaluated using neighbor-joining with bootstrap analysis, parsimony analysis, conditional clustering, and maximum likelihood methods, Sections Amanita, Caesarea, Vaginatae, Validae, Phalloideae, and Amidella were substantially confirmed as monophyletic groups, while the monophyly of section Lepidell.t remained unclear. Branching topologies between and within sections could also pafiially be derived. Stbgenera Amanita an'd Lepidella were not supported. The Mappae group was included in section Validae. Grouping hypotheses obtained by DNA analyses are discussed in relation to the distribution of morphological and anatomical chamcters in the studied species. Key words: fungi, basidiomycetes phylogeny, Agarrcales, Amanita systematics, large subunit rDNA, 28S. R6sum6 : A partir d'un groupe de 49 esp,ces d'Amanita prdalablement examinees morphologiquement et anatomiquement, les auteurs ont utilisd la comparaison des s€quences d'ADN pour ddfinir les groupes naturels et les relations phylog6ndtiques de ce genre. Les sdquences de I'ADN nucl6aire codant pour une partie de la grande sous-unit6 ribosomale ont 6t6 ddterminEes et €valu6es en utilisant l'analyse par liaison en lacet avec le voisin (neighbor-joining with bootstrap), l'analyse en parcimonie, le rcgroupement conditionnel et les m€thodes de ressemblance maximale. Les rdsultats confirment substantiellement les sections Afiarira, Caesarea, Uaqinatae, Ualidae, Phalloideae et Amidella, comme groupes monophyldtiques, alors que la monophylie de la section Lepidella demerxe obscure. -
Appendix K. Survey and Manage Species Persistence Evaluation
Appendix K. Survey and Manage Species Persistence Evaluation Establishment of the 95-foot wide construction corridor and TEWAs would likely remove individuals of H. caeruleus and modify microclimate conditions around individuals that are not removed. The removal of forests and host trees and disturbance to soil could negatively affect H. caeruleus in adjacent areas by removing its habitat, disturbing the roots of host trees, and affecting its mycorrhizal association with the trees, potentially affecting site persistence. Restored portions of the corridor and TEWAs would be dominated by early seral vegetation for approximately 30 years, which would result in long-term changes to habitat conditions. A 30-foot wide portion of the corridor would be maintained in low-growing vegetation for pipeline maintenance and would not provide habitat for the species during the life of the project. Hygrophorus caeruleus is not likely to persist at one of the sites in the project area because of the extent of impacts and the proximity of the recorded observation to the corridor. Hygrophorus caeruleus is likely to persist at the remaining three sites in the project area (MP 168.8 and MP 172.4 (north), and MP 172.5-172.7) because the majority of observations within the sites are more than 90 feet from the corridor, where direct effects are not anticipated and indirect effects are unlikely. The site at MP 168.8 is in a forested area on an east-facing slope, and a paved road occurs through the southeast part of the site. Four out of five observations are more than 90 feet southwest of the corridor and are not likely to be directly or indirectly affected by the PCGP Project based on the distance from the corridor, extent of forests surrounding the observations, and proximity to an existing open corridor (the road), indicating the species is likely resilient to edge- related effects at the site. -
Does Allelopathy Have a Role in the Ecology of Chenopodium Murale?
Ann. Bot. Fennici 41: 37–45 ISSN 0003-3847 Helsinki 27 February 2004 © Finnish Zoological and Botanical Publishing Board 2004 Does allelopathy have a role in the ecology of Chenopodium murale? Ahmed A. El-Khatib1, Ahmed K. Hegazy2 & Hanaa K. Galal1 1) Department of Botany, Faculty of Science, 82524 Sohag, Egypt 2) Department of Botany, Faculty of Science, Cairo University, Egypt Received 10 Jan. 2003, revised version received 3 June 2003, accepted 12 June 2003 El-Khatib, A. A., Hegazy, A. K. & Galal, H. K. 2004: Does allelopathy have a role in the ecology of Chenopodium murale? — Ann. Bot. Fennici 41: 37–45. Bioassays on Chenopodium murale demonstrated that root and shoot aqueous extracts reduced the seed germination, seedling establishment, plant growth and metabolite production of four target species. Leaf area and dry matter production showed a decreasing trend in response to the different treatments. Similar effects were found for pigment, carbohydrate and protein contents. In general, inhibition percentage was a function of extract concentration and plant tissue type. Shoot treatment was more strongly inhibitory than root treatment. The target species arranged from the most affected to the least affected were Melilotus indicus–Trifolium alexandrinum–Triticum pyramidal–Lycopersicon esculentum–Cucumis sativus. Key words: allelopathy, Chenopodium murale, ecology, inter-specific competition, phytotoxicity Introduction winter weed and is considered a pest in agro-eco- systems, roadsides etc. Galal (2000) studied the The importance of allelopathy in nature has plant sociological characteristics of a C. murale and attracted ecologists’ attention with the main reported its negative association with many species, goal of using the phenomenon in interpretation even with those with similar ecological require- in many disciplines related to plant community ments. -
A New Species of Bondarzewia from India
Turkish Journal of Botany Turk J Bot (2015) 39: 128-133 http://journals.tubitak.gov.tr/botany/ © TÜBİTAK Research Article doi:10.3906/bot-1402-82 A new species of Bondarzewia from India 1, 1 2 Kanad DAS *, Arvind PARIHAR , Manoj Emanuel HEMBROM 1 Botanical Survey of India, Cryptogamic Unit, P. O. B. Garden, Howrah, India 2 Botanical Survey of India, Central National Herbarium, P. O. B. Garden, Howrah, India Received: 25.02.2014 Accepted: 18.07.2014 Published Online: 02.01.2015 Printed: 30.01.2015 Abstract: Bondarzewia zonata, collected from North Sikkim, is proposed here as new to science. It is characterized by basidiomata with strong zonate pilei, thin context turning persistent dark red with guaiacol, comparatively small spores with narrow ornamented ridges, and an absence of cystidioles. A detailed description coupled with macro- and micromorphological illustrations of this species is provided. Its relation to the allied species is discussed and a provisional key to the species of Bondarzewia is given. Key words: Macrofungi, Bondarzewia, Russulales, new species, taxonomy, Sikkim 1. Introduction Picea. After thorough macro- and micromorphological The genusBondarzewia was first described by Singer studies followed by a survey of the literature, it proved to (1940). Presently, it accommodates subtropical (Dai et be new to science. It is proposed as Bondarzewia zonata al., 2010) to temperate and wood-inhabiting parasitic and described here in detail with illustrations. Its relation (causing white rot) poroid macrofungi. Therefore, the with closely related taxa is also discussed. genus Bondarzewia can be characterized as pileate stipitate to substipitate basidiocarps, with a dimitic hyphal system 2. -
Plant Life MagillS Encyclopedia of Science
MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D. -
CZECH MYCOLOGY Publication of the Czech Scientific Society for Mycology
CZECH MYCOLOGY Publication of the Czech Scientific Society for Mycology Volume 57 August 2005 Number 1-2 Central European genera of the Boletaceae and Suillaceae, with notes on their anatomical characters Jo s e f Š u t a r a Prosetická 239, 415 01 Tbplice, Czech Republic Šutara J. (2005): Central European genera of the Boletaceae and Suillaceae, with notes on their anatomical characters. - Czech Mycol. 57: 1-50. A taxonomic survey of Central European genera of the families Boletaceae and Suillaceae with tubular hymenophores, including the lamellate Phylloporus, is presented. Questions concerning the delimitation of the bolete genera are discussed. Descriptions and keys to the families and genera are based predominantly on anatomical characters of the carpophores. Attention is also paid to peripheral layers of stipe tissue, whose anatomical structure has not been sufficiently studied. The study of these layers, above all of the caulohymenium and the lateral stipe stratum, can provide information important for a better understanding of relationships between taxonomic groups in these families. The presence (or absence) of the caulohymenium with spore-bearing caulobasidia on the stipe surface is here considered as a significant ge neric character of boletes. A new combination, Pseudoboletus astraeicola (Imazeki) Šutara, is proposed. Key words: Boletaceae, Suillaceae, generic taxonomy, anatomical characters. Šutara J. (2005): Středoevropské rody čeledí Boletaceae a Suillaceae, s poznámka mi k jejich anatomickým znakům. - Czech Mycol. 57: 1-50. Je předložen taxonomický přehled středoevropských rodů čeledí Boletaceae a. SuiUaceae s rourko- vitým hymenoforem, včetně rodu Phylloporus s lupeny. Jsou diskutovány otázky týkající se vymezení hřibovitých rodů. Popisy a klíče k čeledím a rodům jsou založeny převážně na anatomických znacích plodnic. -
Allelopathy; a Brief Review
Journal of Novel Applied Sciences Available online at www.jnasci.org ©2020 JNAS Journal-2020-9-1/1-12 ISSN 2322-5149 ©2020 JNAS ALLELOPATHY; A BRIEF REVIEW Javed Kamal Department of Plant Sciences, Faculty of Biological Sciences, Quaid-I-Azam University, Islamabad, Pakistan. Corresponding author: Javed Kamal Email: [email protected] Mobile: 00923046886850 ABSTRACT: Allelopathy is a well known area of active research in ecology. However, its importance in agro-ecology is still underappreciated. This review sets out to address this situation and introduce this new and developing field to a wider research audience and to stimulate new research in it. The review starts with an introduction, followed by discussions of allelochemicals, the role of allelopathy in crop production, Allelopathy related problems in crop production, and Suggestions for future research. It also describes broader research into allelopathy in agriculture and the biosciences, and literature resources on the subject. We hope that it will encourage more scientists to initiate research into this exciting new field. Keywords: Allelopathy, Agro-ecology, Bio-sciences, Crop production, Ecology. INTRODUCTION Allelopathy is a natural phenomenon, defined as: “The inhibition of growth in one species of plants by chemicals produced by another species” Or, more widely: “The biochemical interactions among all types of plants, including microorganisms” The word allelopathy derives from two roots: allelon, meaning “of each other”; and pathos, meaning “to suffer”. The “inhibitory” chemical is released into the environment by one plant, where it then affects the growth and development of its neighbors. All living things need certain resources to live and grow, and plants require sunlight, nutrients, water, and air.