File Systems Ext2, Ext3 and Ext4 Table of Contents
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Lecture 9: Data Storage and IO Models Lecture 9
Lecture 9 Lecture 9: Data Storage and IO Models Lecture 9 Announcements • Submission Project Part 1 tonight • Instructions on Piazza! • PS2 due on Friday at 11:59 pm • Questions? Easier than PS1. • Badgers Rule! Lecture 9 Today’s Lecture 1. Data Storage 2. Disk and Files 3. Buffer Manager - Prelims 3 Lecture 9 > Section 1 1. Data Storage 4 Lecture 9 > Section 1 What you will learn about in this section 1. Life cycle of a query 2. Architecture of a DBMS 3. Memory Hierarchy 5 Lecture 9 > Section 1 Life cycle of a query Query Result Query Database Server Query Execute Parser Optimizer Select R.text from |…|……|………..|………..| Report R, Weather W |…|……|………..|………..| where W.image.rain() Scheduler Operators |…|……|………..|………..| and W.city = R.city |…|……|………..|………..| and W.date = R.date |…|……|………..|………..| and |…|……|………..|………..| R.text. |…|……|………..|………..| matches(“insurance claims”) |…|……|………..|………..| |…|……|………..|………..| |…|……|………..|………..| |…|……|………..|………..| Query Query Syntax Tree Query Plan Result Segments 6 Lecture 9 > Section 1 > Architecture of a DBMS Internal Architecture of a DBMS query Query Execution data access Storage Manager I/O access 7 Lecture 9 > Section 1 > Storage Manager Architecture of a Storage Manager Access Methods Sorted File Hash Index B+-tree Heap File Index Manager Buffer Manager Recovery Manager Concurrency Control I/O Manager IO Accesses In Systems, IO cost matters a ton! 8 Lecture 9 > Section 1 > Data Storage Data Storage • How does a DBMS store and access data? • main memory (fast, temporary) • disk (slow, permanent) • How -
System Calls System Calls
System calls We will investigate several issues related to system calls. Read chapter 12 of the book Linux system call categories file management process management error handling note that these categories are loosely defined and much is behind included, e.g. communication. Why? 1 System calls File management system call hierarchy you may not see some topics as part of “file management”, e.g., sockets 2 System calls Process management system call hierarchy 3 System calls Error handling hierarchy 4 Error Handling Anything can fail! System calls are no exception Try to read a file that does not exist! Error number: errno every process contains a global variable errno errno is set to 0 when process is created when error occurs errno is set to a specific code associated with the error cause trying to open file that does not exist sets errno to 2 5 Error Handling error constants are defined in errno.h here are the first few of errno.h on OS X 10.6.4 #define EPERM 1 /* Operation not permitted */ #define ENOENT 2 /* No such file or directory */ #define ESRCH 3 /* No such process */ #define EINTR 4 /* Interrupted system call */ #define EIO 5 /* Input/output error */ #define ENXIO 6 /* Device not configured */ #define E2BIG 7 /* Argument list too long */ #define ENOEXEC 8 /* Exec format error */ #define EBADF 9 /* Bad file descriptor */ #define ECHILD 10 /* No child processes */ #define EDEADLK 11 /* Resource deadlock avoided */ 6 Error Handling common mistake for displaying errno from Linux errno man page: 7 Error Handling Description of the perror () system call. -
Study of File System Evolution
Study of File System Evolution Swaminathan Sundararaman, Sriram Subramanian Department of Computer Science University of Wisconsin {swami, srirams} @cs.wisc.edu Abstract File systems have traditionally been a major area of file systems are typically developed and maintained by research and development. This is evident from the several programmer across the globe. At any point in existence of over 50 file systems of varying popularity time, for a file system, there are three to six active in the current version of the Linux kernel. They developers, ten to fifteen patch contributors but a single represent a complex subsystem of the kernel, with each maintainer. These people communicate through file system employing different strategies for tackling individual file system mailing lists [14, 16, 18] various issues. Although there are many file systems in submitting proposals for new features, enhancements, Linux, there has been no prior work (to the best of our reporting bugs, submitting and reviewing patches for knowledge) on understanding how file systems evolve. known bugs. The problems with the open source We believe that such information would be useful to the development approach is that all communication is file system community allowing developers to learn buried in the mailing list archives and aren’t easily from previous experiences. accessible to others. As a result when new file systems are developed they do not leverage past experience and This paper looks at six file systems (Ext2, Ext3, Ext4, could end up re-inventing the wheel. To make things JFS, ReiserFS, and XFS) from a historical perspective worse, people could typically end up doing the same (between kernel versions 1.0 to 2.6) to get an insight on mistakes as done in other file systems. -
Linux on the Road
Linux on the Road Linux with Laptops, Notebooks, PDAs, Mobile Phones and Other Portable Devices Werner Heuser <wehe[AT]tuxmobil.org> Linux Mobile Edition Edition Version 3.22 TuxMobil Berlin Copyright © 2000-2011 Werner Heuser 2011-12-12 Revision History Revision 3.22 2011-12-12 Revised by: wh The address of the opensuse-mobile mailing list has been added, a section power management for graphics cards has been added, a short description of Intel's LinuxPowerTop project has been added, all references to Suspend2 have been changed to TuxOnIce, links to OpenSync and Funambol syncronization packages have been added, some notes about SSDs have been added, many URLs have been checked and some minor improvements have been made. Revision 3.21 2005-11-14 Revised by: wh Some more typos have been fixed. Revision 3.20 2005-11-14 Revised by: wh Some typos have been fixed. Revision 3.19 2005-11-14 Revised by: wh A link to keytouch has been added, minor changes have been made. Revision 3.18 2005-10-10 Revised by: wh Some URLs have been updated, spelling has been corrected, minor changes have been made. Revision 3.17.1 2005-09-28 Revised by: sh A technical and a language review have been performed by Sebastian Henschel. Numerous bugs have been fixed and many URLs have been updated. Revision 3.17 2005-08-28 Revised by: wh Some more tools added to external monitor/projector section, link to Zaurus Development with Damn Small Linux added to cross-compile section, some additions about acoustic management for hard disks added, references to X.org added to X11 sections, link to laptop-mode-tools added, some URLs updated, spelling cleaned, minor changes. -
Membrane: Operating System Support for Restartable File Systems Swaminathan Sundararaman, Sriram Subramanian, Abhishek Rajimwale, Andrea C
Membrane: Operating System Support for Restartable File Systems Swaminathan Sundararaman, Sriram Subramanian, Abhishek Rajimwale, Andrea C. Arpaci-Dusseau, Remzi H. Arpaci-Dusseau, Michael M. Swift Computer Sciences Department, University of Wisconsin, Madison Abstract and most complex code bases in the kernel. Further, We introduce Membrane, a set of changes to the oper- file systems are still under active development, and new ating system to support restartable file systems. Mem- ones are introduced quite frequently. For example, Linux brane allows an operating system to tolerate a broad has many established file systems, including ext2 [34], class of file system failures and does so while remain- ext3 [35], reiserfs [27], and still there is great interest in ing transparent to running applications; upon failure, the next-generation file systems such as Linux ext4 and btrfs. file system restarts, its state is restored, and pending ap- Thus, file systems are large, complex, and under develop- plication requests are serviced as if no failure had oc- ment, the perfect storm for numerous bugs to arise. curred. Membrane provides transparent recovery through Because of the likely presence of flaws in their imple- a lightweight logging and checkpoint infrastructure, and mentation, it is critical to consider how to recover from includes novel techniques to improve performance and file system crashes as well. Unfortunately, we cannot di- correctness of its fault-anticipation and recovery machin- rectly apply previous work from the device-driver litera- ery. We tested Membrane with ext2, ext3, and VFAT. ture to improving file-system fault recovery. File systems, Through experimentation, we show that Membrane in- unlike device drivers, are extremely stateful, as they man- duces little performance overhead and can tolerate a wide age vast amounts of both in-memory and persistent data; range of file system crashes. -
Dealing with Document Size Limits
Dealing with Document Size Limits Introduction The Electronic Case Filing system will not accept PDF documents larger than ten megabytes (MB). If the document size is less than 10 MB, it can be filed electronically just as it is. If it is larger than 10 MB, it will need to be divided into two or more documents, with each document being less than 10 MB. Word Processing Documents Documents created with a word processing program (such as WordPerfect or Microsoft Word) and correctly converted to PDF will generally be smaller than a scanned document. Because of variances in software, usage, and content, it is difficult to estimate the number of pages that would constitute 10 MB. (Note: See “Verifying File Size” below and for larger documents, see “Splitting PDF Documents into Multiple Documents” below.) Scanned Documents Although the judges’ Filing Preferences indicate a preference for conversion of documents rather than scanning, it will be necessary to scan some documents for filing, e.g., evidentiary attachments must be scanned. Here are some things to remember: • Documents scanned to PDF are generally much larger than those converted through a word processor. • While embedded fonts may be necessary for special situations, e.g., trademark, they will increase the file size. • If graphs or color photos are included, just a few pages can easily exceed the 10 MB limit. Here are some guidelines: • The court’s standard scanner resolution is 300 dots per inch (DPI). Avoid using higher resolutions as this will create much larger file sizes. • Normally, the output should be set to black and white. -
ECE 598 – Advanced Operating Systems Lecture 19
ECE 598 { Advanced Operating Systems Lecture 19 Vince Weaver http://web.eece.maine.edu/~vweaver [email protected] 7 April 2016 Announcements • Homework #7 was due • Homework #8 will be posted 1 Why use FAT over ext2? • FAT simpler, easy to code • FAT supported on all major OSes • ext2 faster, more robust filename and permissions 2 btrfs • B-tree fs (similar to a binary tree, but with pages full of leaves) • overwrite filesystem (overwite on modify) vs CoW • Copy on write. When write to a file, old data not overwritten. Since old data not over-written, crash recovery better Eventually old data garbage collected • Data in extents 3 • Copy-on-write • Forest of trees: { sub-volumes { extent-allocation { checksum tree { chunk device { reloc • On-line defragmentation • On-line volume growth 4 • Built-in RAID • Transparent compression • Snapshots • Checksums on data and meta-data • De-duplication • Cloning { can make an exact snapshot of file, copy-on- write different than link, different inodles but same blocks 5 Embedded • Designed to be small, simple, read-only? • romfs { 32 byte header (magic, size, checksum,name) { Repeating files (pointer to next [0 if none]), info, size, checksum, file name, file data • cramfs 6 ZFS Advanced OS from Sun/Oracle. Similar in idea to btrfs indirect still, not extent based? 7 ReFS Resilient FS, Microsoft's answer to brtfs and zfs 8 Networked File Systems • Allow a centralized file server to export a filesystem to multiple clients. • Provide file level access, not just raw blocks (NBD) • Clustered filesystems also exist, where multiple servers work in conjunction. -
CS 5600 Computer Systems
CS 5600 Computer Systems Lecture 10: File Systems What are We Doing Today? • Last week we talked extensively about hard drives and SSDs – How they work – Performance characterisEcs • This week is all about managing storage – Disks/SSDs offer a blank slate of empty blocks – How do we store files on these devices, and keep track of them? – How do we maintain high performance? – How do we maintain consistency in the face of random crashes? 2 • ParEEons and MounEng • Basics (FAT) • inodes and Blocks (ext) • Block Groups (ext2) • Journaling (ext3) • Extents and B-Trees (ext4) • Log-based File Systems 3 Building the Root File System • One of the first tasks of an OS during bootup is to build the root file system 1. Locate all bootable media – Internal and external hard disks – SSDs – Floppy disks, CDs, DVDs, USB scks 2. Locate all the parEEons on each media – Read MBR(s), extended parEEon tables, etc. 3. Mount one or more parEEons – Makes the file system(s) available for access 4 The Master Boot Record Address Size Descripon Hex Dec. (Bytes) Includes the starEng 0x000 0 Bootstrap code area 446 LBA and length of 0x1BE 446 ParEEon Entry #1 16 the parEEon 0x1CE 462 ParEEon Entry #2 16 0x1DE 478 ParEEon Entry #3 16 0x1EE 494 ParEEon Entry #4 16 0x1FE 510 Magic Number 2 Total: 512 ParEEon 1 ParEEon 2 ParEEon 3 ParEEon 4 MBR (ext3) (swap) (NTFS) (FAT32) Disk 1 ParEEon 1 MBR (NTFS) 5 Disk 2 Extended ParEEons • In some cases, you may want >4 parEEons • Modern OSes support extended parEEons Logical Logical ParEEon 1 ParEEon 2 Ext. -
Ext4 File System and Crash Consistency
1 Ext4 file system and crash consistency Changwoo Min 2 Summary of last lectures • Tools: building, exploring, and debugging Linux kernel • Core kernel infrastructure • Process management & scheduling • Interrupt & interrupt handler • Kernel synchronization • Memory management • Virtual file system • Page cache and page fault 3 Today: ext4 file system and crash consistency • File system in Linux kernel • Design considerations of a file system • History of file system • On-disk structure of Ext4 • File operations • Crash consistency 4 File system in Linux kernel User space application (ex: cp) User-space Syscalls: open, read, write, etc. Kernel-space VFS: Virtual File System Filesystems ext4 FAT32 JFFS2 Block layer Hardware Embedded Hard disk USB drive flash 5 What is a file system fundamentally? int main(int argc, char *argv[]) { int fd; char buffer[4096]; struct stat_buf; DIR *dir; struct dirent *entry; /* 1. Path name -> inode mapping */ fd = open("/home/lkp/hello.c" , O_RDONLY); /* 2. File offset -> disk block address mapping */ pread(fd, buffer, sizeof(buffer), 0); /* 3. File meta data operation */ fstat(fd, &stat_buf); printf("file size = %d\n", stat_buf.st_size); /* 4. Directory operation */ dir = opendir("/home"); entry = readdir(dir); printf("dir = %s\n", entry->d_name); return 0; } 6 Why do we care EXT4 file system? • Most widely-deployed file system • Default file system of major Linux distributions • File system used in Google data center • Default file system of Android kernel • Follows the traditional file system design 7 History of file system design 8 UFS (Unix File System) • The original UNIX file system • Design by Dennis Ritche and Ken Thompson (1974) • The first Linux file system (ext) and Minix FS has a similar layout 9 UFS (Unix File System) • Performance problem of UFS (and the first Linux file system) • Especially, long seek time between an inode and data block 10 FFS (Fast File System) • The file system of BSD UNIX • Designed by Marshall Kirk McKusick, et al. -
W4118: Linux File Systems
W4118: Linux file systems Instructor: Junfeng Yang References: Modern Operating Systems (3rd edition), Operating Systems Concepts (8th edition), previous W4118, and OS at MIT, Stanford, and UWisc File systems in Linux Linux Second Extended File System (Ext2) . What is the EXT2 on-disk layout? . What is the EXT2 directory structure? Linux Third Extended File System (Ext3) . What is the file system consistency problem? . How to solve the consistency problem using journaling? Virtual File System (VFS) . What is VFS? . What are the key data structures of Linux VFS? 1 Ext2 “Standard” Linux File System . Was the most commonly used before ext3 came out Uses FFS like layout . Each FS is composed of identical block groups . Allocation is designed to improve locality inodes contain pointers (32 bits) to blocks . Direct, Indirect, Double Indirect, Triple Indirect . Maximum file size: 4.1TB (4K Blocks) . Maximum file system size: 16TB (4K Blocks) On-disk structures defined in include/linux/ext2_fs.h 2 Ext2 Disk Layout Files in the same directory are stored in the same block group Files in different directories are spread among the block groups Picture from Tanenbaum, Modern Operating Systems 3 e, (c) 2008 Prentice-Hall, Inc. All rights reserved. 0-13-6006639 3 Block Addressing in Ext2 Twelve “direct” blocks Data Data BlockData Inode Block Block BLKSIZE/4 Indirect Data Data Blocks BlockData Block Data (BLKSIZE/4)2 Indirect Block Data BlockData Blocks Block Double Block Indirect Indirect Blocks Data Data Data (BLKSIZE/4)3 BlockData Data Indirect Block BlockData Block Block Triple Double Blocks Block Indirect Indirect Data Indirect Data BlockData Blocks Block Block Picture from Tanenbaum, Modern Operating Systems 3 e, (c) 2008 Prentice-Hall, Inc. -
Ext3 = Ext2 + Journaling
FS Sistem datoteka-skup metoda i struktura podataka koje operativni sistem koristi za čuvanje podataka Struktura sistema datoteka: - 1. zaglavlje→neophodni podaci za funkcionisanje sistema datoteka - 2. strukture za organizaciju podataka na medijumu→meta podaci - 3. podaci→datoteke i direktorijumi Strukture podataka neophodne za realizaciju sistema datoteka: - PCB(Partition Control Block) - BCB(Boot control Block) - Kontrolne strukture za alokaciju datoteka(i-node tabela kod Linux-a) - Direktorijumske strukture koje sadrže kontrolne blokove datoteka - FCB(File Control Block) ext3 Slide 1 of 51 VIRTUELNI SISTEM DATOTEKA(VFS) Linux podržava rad sa velikim brojem sistema datoteka(ext2,ext3, XFS,FAT, NTFS...) VFS-objektno orjentisani način realizacije sistema datoteka koji omogućava korisniku da na isti način pristupa svim sistemima datoteka Način obraćanja korisnika sistemu datoteka - korisnik->API - VFS->sistem datoteka ext3 Slide 2 of 51 Linux FS Linux posmatra svaki sistem datoteka kao nezavisnu hijerarhijsku strukturu objekata(datoteka i direktorijuma) na čijem se vrhu nalazi root(/) direktorijum Objekti Linux sistema datoteka: Super block - zaglavlje(superblock) - i-node tabela I-Node Table - blokovi sa podacima - direktorijumski blokovi - blokovi indirektnih pokazivača Data Area i-node-opisuje objekte, oko 128B na disku Kompromis između veličine i-node tabele i brzine rada sistema datoteka - prvih 10-12 pokazivača na blokove sa podacima - za alokaciju većih datoteka koristi se single indirection block - za još veće datoteke -
Comparing Filesystem Performance: Red Hat Enterprise Linux 6 Vs
COMPARING FILE SYSTEM I/O PERFORMANCE: RED HAT ENTERPRISE LINUX 6 VS. MICROSOFT WINDOWS SERVER 2012 When choosing an operating system platform for your servers, you should know what I/O performance to expect from the operating system and file systems you select. In the Principled Technologies labs, using the IOzone file system benchmark, we compared the I/O performance of two operating systems and file system pairs, Red Hat Enterprise Linux 6 with ext4 and XFS file systems, and Microsoft Windows Server 2012 with NTFS and ReFS file systems. Our testing compared out-of-the-box configurations for each operating system, as well as tuned configurations optimized for better performance, to demonstrate how a few simple adjustments can elevate I/O performance of a file system. We found that file systems available with Red Hat Enterprise Linux 6 delivered better I/O performance than those shipped with Windows Server 2012, in both out-of- the-box and optimized configurations. With I/O performance playing such a critical role in most business applications, selecting the right file system and operating system combination is critical to help you achieve your hardware’s maximum potential. APRIL 2013 A PRINCIPLED TECHNOLOGIES TEST REPORT Commissioned by Red Hat, Inc. About file system and platform configurations While you can use IOzone to gauge disk performance, we concentrated on the file system performance of two operating systems (OSs): Red Hat Enterprise Linux 6, where we examined the ext4 and XFS file systems, and Microsoft Windows Server 2012 Datacenter Edition, where we examined NTFS and ReFS file systems.