Cyanobacteria: an Emerging Source for Drug Discovery
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Cyanobacterial Peptide Toxins
CYANOBACTERIAL PEPTIDE TOXINS CYANOBACTERIAL PEPTIDE TOXINS 1. Exposure data 1.1 Introduction Cyanobacteria, also known as blue-green algae, are widely distributed in fresh, brackish and marine environments, in soil and on moist surfaces. They are an ancient group of prokaryotic organisms that are found all over the world in environments as diverse as Antarctic soils and volcanic hot springs, often where no other vegetation can exist (Knoll, 2008). Cyanobacteria are considered to be the organisms responsible for the early accumulation of oxygen in the earth’s atmosphere (Knoll, 2008). The name ‘blue- green’ algae derives from the fact that these organisms contain a specific pigment, phycocyanin, which gives many species a slightly blue-green appearance. Cyanobacterial metabolites can be lethally toxic to wildlife, domestic livestock and even humans. Cyanotoxins fall into three broad groups of chemical structure: cyclic peptides, alkaloids and lipopolysaccharides. Table 1.1 gives an overview of the specific toxic substances within these broad groups that are produced by different genera of cyanobacteria together, with their primary target organs in mammals. However, not all cyanobacterial blooms are toxic and neither are all strains within one species. Toxic and non-toxic strains show no predictable difference in appearance and, therefore, physicochemical, biochemical and biological methods are essential for the detection of cyanobacterial toxins. The most frequently reported cyanobacterial toxins are cyclic heptapeptide toxins known as microcystins which can be isolated from several species of the freshwater genera Microcystis , Planktothrix ( Oscillatoria ), Anabaena and Nostoc . More than 70 structural variants of microcystins are known. A structurally very similar class of cyanobacterial toxins is nodularins ( < 10 structural variants), which are cyclic pentapeptide hepatotoxins that are found in the brackish-water cyanobacterium Nodularia . -
Protein–Protein Interactions, Dynamics Simulations and Free Energy Calculations
molecules Article Structural Insight into the Binding of Cyanovirin-N with the Spike Glycoprotein, Mpro and PLpro of SARS-CoV-2: Protein–Protein Interactions, Dynamics Simulations and Free Energy Calculations Devashan Naidoo 1,* , Pallab Kar 2, Ayan Roy 3,*, Taurai Mutanda 1 , Joseph Bwapwa 1, Arnab Sen 2 and Akash Anandraj 1 1 Centre for Algal Biotechnology, Mangosuthu University of Technology, P.O. Box 12363, Durban 4026, South Africa; [email protected] (T.M.); [email protected] (J.B.); [email protected] (A.A.) 2 Bioinformatics Facility, Department of Botany, University of North Bengal, Siliguri 734013, India; [email protected] (P.K.); [email protected] (A.S.) 3 Department of Biotechnology, Lovely Professional University, Phagwara 144411, India * Correspondence: [email protected] (D.N.); [email protected] (A.R.) Abstract: The emergence of COVID-19 continues to pose severe threats to global public health. The pandemic has infected over 171 million people and claimed more than 3.5 million lives to date. Citation: Naidoo, D.; Kar, P.; Roy, A.; We investigated the binding potential of antiviral cyanobacterial proteins including cyanovirin-N, Mutanda, T.; Bwapwa, J.; Sen, A.; scytovirin and phycocyanin with fundamental proteins involved in attachment and replication of Anandraj, A. Structural Insight into SARS-CoV-2. Cyanovirin-N displayed the highest binding energy scores (−16.8 ± 0.02 kcal/mol, the Binding of Cyanovirin-N with the −12.3 ± 0.03 kcal/mol and −13.4 ± 0.02 kcal/mol, respectively) with the spike protein, the main Spike Glycoprotein, Mpro and PLpro of protease (Mpro) and the papainlike protease (PLpro) of SARS-CoV-2. -
Aquatic Microbial Ecology 69:135
Vol. 69: 135–143, 2013 AQUATIC MICROBIAL ECOLOGY Published online May 28 doi: 10.3354/ame01628 Aquat Microb Ecol A cultivation-independent approach for the genetic and cyanotoxin characterization of colonial cyanobacteria Yannick Lara1, Alexandre Lambion1, Diana Menzel2, Geoffrey A. Codd2, Annick Wilmotte1,* 1Center for Protein Engineering, University of Liège, 4000 Liège, Belgium 2Division of Molecular Microbiology, College of Life Sciences, University of Dundee, Dundee DD1 4HN, UK ABSTRACT: To bypass the constraint of cyanobacterial strain isolation and cultivation, a combina- tion of whole genome amplification (WGA) and enzyme-linked immunoassay (ELISA) for micro- cystin toxins (MCs) was tested on individual colonies of Microcystis and Woronichinia, taken directly from aquatic environments. Genomic DNA of boiled cells was amplified by multiple strand displacement amplification (MDA), followed by several specific PCR reactions to character- ize the genotype of each colony. Sequences of 3 different housekeeping genes (ftsZ, gltX, and recA), of 3 MC biosynthesis genes (mcyA, mcyB, and mcyE), and the Internal Transcribed Spacer (ITS) were analyzed for 11 colonies of Microcystis. MCs were detected and quantified by ELISA in 7 of the 11 Microcystis colonies tested, in agreement with the detection of mcy genes. Sequence types (ST) based on the concatenated sequences of housekeeping genes from cyanobacterial colonies from Belgian water bodies appeared to be endemic when compared to those of strains described in the literature. One colony appeared to belong to a yet undiscovered lineage. A simi- lar protocol was used for 6 colonies of the genus Woronichinia, a taxon that is very difficult to cul- tivate in the laboratory. -
Occurrence of Nitrogen-Fixing Cyanobacteria During Different Stages of Paddy Cultivation
Bangladesh J. Plant Taxon. 18(1): 73-76, 2011 (June) ` - Short communication © 2011 Bangladesh Association of Plant Taxonomists OCCURRENCE OF NITROGEN-FIXING CYANOBACTERIA DURING DIFFERENT STAGES OF PADDY CULTIVATION * KAUSHAL KISHORE CHOUDHARY Department of Botany, B.R.A. Bihar University, Muzaffarpur-842001, Bihar, India Keywords: Cyanobacteria; Diversity; Nitrogen-fixing; Rice fields; North Bihar. Rapid decline in soil fertility and productivity due to excessive application of chemical fertilizer particularly nitrogen and its increasing cost has induced to develop alternate biological sources of nitrogenous fertilizers (Boussiba, 1991). Biological fertilizers maintain the nitrogen status of the soils and helps in optimum crop production to meet the demand of increasing human populations while maintaining the agricultural practices sustainable. With establishment of agronomic potential of cyanobacteria (Singh, 1950), these photosynthetic prokaryotes were applied and studied for enrichment of different living ecosystems with nitrogenous compounds. Cyanobacteria are endowed with a specialized structure ‘heterocyst’ with ‘nitrogenase complex’ capable of converting unavailable sources of molecular nitrogen into nitrogenous compounds (Ernst et al., 1992). The ability of cyanobacteria to fix atmospheric nitrogen is increasing concern worldwide to exploit this tiny living system for nitrogenous fertilizers for sustainable agriculture practices. Advances in cyanobacteria have revealed their significant contribution in promoting the fertility of the soil and water including marine by adding nitrogen and phosphorus. Cyanobacteria contribute phosphorus to the soil by mobilizing the insoluble organic phosphates present in the soil with enzyme ‘phosphatses’ (Whitton et al., 1991). Moreover, cyanobacteria enhance the water holding capacity by adding polysaccharidic material to the soil (Richert et al., 2005) that increases the soil aggregation property. -
Antiviral Cyanometabolites—A Review
biomolecules Review Antiviral Cyanometabolites—A Review Hanna Mazur-Marzec 1,*, Marta Cegłowska 2 , Robert Konkel 1 and Krzysztof Pyr´c 3 1 Division of Marine Biotechnology, University of Gda´nsk,Marszałka J. Piłsudskiego 46, PL-81-378 Gdynia, Poland; [email protected] 2 Institute of Oceanology, Polish Academy of Science, Powsta´nców Warszawy 55, PL-81-712 Sopot, Poland; [email protected] 3 Virogenetics Laboratory of Virology, Malopolska Centre of Biotechnology, Jagiellonian University, Gronostajowa 7A, PL-30-387 Krakow, Poland; [email protected] * Correspondence: [email protected] Abstract: Global processes, such as climate change, frequent and distant travelling and population growth, increase the risk of viral infection spread. Unfortunately, the number of effective and accessible medicines for the prevention and treatment of these infections is limited. Therefore, in recent years, efforts have been intensified to develop new antiviral medicines or vaccines. In this review article, the structure and activity of the most promising antiviral cyanobacterial products are presented. The antiviral cyanometabolites are mainly active against the human immunodeficiency virus (HIV) and other enveloped viruses such as herpes simplex virus (HSV), Ebola or the influenza viruses. The majority of the metabolites are classified as lectins, monomeric or dimeric proteins with unique amino acid sequences. They all show activity at the nanomolar range but differ in carbohydrate specificity and recognize a different epitope on high mannose oligosaccharides. The cyanobacterial lectins include cyanovirin-N (CV-N), scytovirin (SVN), microvirin (MVN), Microcystis viridis lectin (MVL), and Oscillatoria agardhii agglutinin (OAA). Cyanobacterial polysaccharides, peptides, and other metabolites also have potential to be used as antiviral drugs. -
Marine Natural Products: a Source of Novel Anticancer Drugs
marine drugs Review Marine Natural Products: A Source of Novel Anticancer Drugs Shaden A. M. Khalifa 1,2, Nizar Elias 3, Mohamed A. Farag 4,5, Lei Chen 6, Aamer Saeed 7 , Mohamed-Elamir F. Hegazy 8,9, Moustafa S. Moustafa 10, Aida Abd El-Wahed 10, Saleh M. Al-Mousawi 10, Syed G. Musharraf 11, Fang-Rong Chang 12 , Arihiro Iwasaki 13 , Kiyotake Suenaga 13 , Muaaz Alajlani 14,15, Ulf Göransson 15 and Hesham R. El-Seedi 15,16,17,18,* 1 Clinical Research Centre, Karolinska University Hospital, Novum, 14157 Huddinge, Stockholm, Sweden 2 Department of Molecular Biosciences, the Wenner-Gren Institute, Stockholm University, SE 106 91 Stockholm, Sweden 3 Department of Laboratory Medicine, Faculty of Medicine, University of Kalamoon, P.O. Box 222 Dayr Atiyah, Syria 4 Pharmacognosy Department, College of Pharmacy, Cairo University, Kasr el Aini St., P.B. 11562 Cairo, Egypt 5 Department of Chemistry, School of Sciences & Engineering, The American University in Cairo, 11835 New Cairo, Egypt 6 College of Food Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China 7 Department of Chemitry, Quaid-i-Azam University, Islamabad 45320, Pakistan 8 Department of Pharmaceutical Biology, Institute of Pharmacy and Biochemistry, Johannes Gutenberg University, Staudingerweg 5, 55128 Mainz, Germany 9 Chemistry of Medicinal Plants Department, National Research Centre, 33 El-Bohouth St., Dokki, 12622 Giza, Egypt 10 Department of Chemistry, Faculty of Science, University of Kuwait, 13060 Safat, Kuwait 11 H.E.J. Research Institute of Chemistry, -
DEVELOPMENT and EVALUATION of HIV Gp120 RESPONSIVE MICROBICIDE
DEVELOPMENT AND EVALUATION OF HIV gp120 RESPONSIVE MICROBICIDE FORMULATION FOR THE PREVENTION OF HIV SEXUAL TRANSMISSION A DISSERTATION IN Pharmaceutical Sciences and Chemistry Presented to the Faculty of the University Of Missouri-Kansas City in partial fulfillment of The requirements for the degree of DOCTOR OF PHILOSOPHY By Fohona S. Coulibaly B.S Chemical Engineering, INP-HB, Yamoussoukro, Ivory Coast, 2011 Kansas City, Missouri 2018 © 2018 FOHONA S. COULIBALY ALL RIGHTS RESERVED DEVELOPMENT AND EVALUATION OF HIV gp120 RESPONSIVE MICROBICIDE FORMULATION FOR THE PREVENTION OF HIV SEXUAL TRANSMISSION Fohona S. Coulibaly, Candidate for the Doctor of Philosophy Degree University of Missouri-Kansas City, 2018 ABSTRACT Sexual transmission of HIV remains the primary route (75 to 85%) of HIV infection among all new infection cases. Furthermore, women represent the most vulnerable population and are more susceptible to HIV infections than their male counterpart. Thus, there is an urgent need to develop topical (vaginal/rectal) microbicide formulations capable of preventing HIV sexual transmission. The objective of this dissertation is to develop a mannose specific, lectin-based topical microbicide formulation capable of targeting HIV gp120 for the prevention of HIV sexual transmission. In Chapters 1 and 2, the general hypothesis, aims and scope of this work are introduced. Chapter 3 covers the literature review of anti-HIV lectins and current delivery approaches. In Chapter 4, the binding interactions between the mannose specific lectin Concanavalin A (ConA) and glycogen from Oster, as well as mannan from Saccharomyces cerevisiae, were studied using a quartz crystal microbalance (QCM). The equilibrium dissociation constant describing the interaction between Con A and glycogen (KD = 0.25 μM) was 12 fold lower than the equilibrium dissociation constant describing the binding between Con A and mannan (KD = iii 2.89 μM). -
Antiviral Activity of Freshwater Algae Received On: 03-01-2012 Revised On: 09-01-2012 Accepted On: 13-01-2012
Journal of Applied Pharmaceutical Science 02 (02); 2012: 21-25 ISSN: 2231-3354 Antiviral Activity of Freshwater Algae Received on: 03-01-2012 Revised on: 09-01-2012 Accepted on: 13-01-2012 Sayda M. Abdo, Mona H. Hetta, Waleed M. El-Senousy, Rawheya A. Salah El Din and Gamila H. Ali ABSTRACT Sayda M. Abdo, Waleed M. El-Senousy, Five freshwater algal species were isolated from Nile River and studied for their Gamila H. Ali biological (cytotoxic and antiviral activity) in order to test their benefit in the Egyptian drinking Water pollution Research Department, water source. The algal species were isolated and identified as: Anabaena sphaerica, National Research Centre, Cairo. Chroococcus turgidus, Oscillatoria limnetica, and Spirulina platensis (blue – green algae, Cyanobacteria) and Cosmarium leave (green algae). They were cultivated using a Photobioreactor and purified using BG11 media. Twenty five grams of each of the five powdered algal species were extracted with MeOH till exhaustion to give five methanolic Mona H. Hetta extracts for Anabaena sphaerica, Chroococcus turgidus, Oscillatoria limnetica, Spirulina Pharmacognosy Department, Faculty platensis and Cosmarium leave respectively. The residues left were extracted with distilled H2O of Pharmacy, Beni-Suef University, at 50oC to give five aqueous extracts respectively. The cytotoxicity of all the extracts was tested Beni-Suef; on Hep-2 cell line and their antiviral assays were tested on Adenovirus Type 40 as a preliminary testing. Nested PCR was carried out for confirmation of Adenovirus. Antialgal inhibitory effect on algal community was carried out. Results revealed that the non toxic concentrations for all the extracts were 2mg/ml and Spirulina platensis methanol and water extracts were active alga as antiviral (50% and 23.3% of reduction respectively). -
Adsorption of Ten Microcystin Congeners to Common Laboratory-Ware Is Solvent and Surface Dependent
toxins Article Adsorption of Ten Microcystin Congeners to Common Laboratory-Ware Is Solvent and Surface Dependent Stefan Altaner 1, Jonathan Puddick 2, Susanna A. Wood 3 and Daniel R. Dietrich 1,* 1 Human and Environmental Toxicology, University of Konstanz, P.O. Box 662, 78457 Konstanz, Germany; [email protected] 2 Cawthron Institute, Private Bag 2, Nelson 7010, New Zealand; [email protected] 3 Environmental Research Institute, University of Waikato, Private Bag 3105, Hamilton 3240, New Zealand; [email protected] * Correspondence: daniel.dietrich@uni-konstanz; Tel.: +49-7531-883-518 Academic Editors: Lesley V. D’Anglada, Elizabeth D. Hilborn and Lorraine C. Backer Received: 3 March 2017; Accepted: 31 March 2017; Published: 6 April 2017 Abstract: Cyanobacteria can produce heptapetides called microcystins (MC) which are harmful to humans due to their ability to inhibit cellular protein phosphatases. Quantitation of these toxins can be hampered by their adsorption to common laboratory-ware during sample processing and analysis. Because of their structural diversity (>100 congeners) and different physico-chemical properties, they vary in their adsorption to surfaces. In this study, the adsorption of ten different MC congeners (encompassing non-arginated to doubly-arginated congeners) to common laboratory-ware was assessed using different solvent combinations. Sample handling steps were mimicked with glass and polypropylene pipettes and vials with increasing methanol concentrations at two pH levels, before analysis by liquid chromatography-tandem mass spectrometry. We demonstrated that MC adsorb to polypropylene surfaces irrespective of pH. After eight successive pipet actions using polypropylene tips ca. 20% of the MC were lost to the surface material, which increased to 25%–40% when solutions were acidified. -
Multiple Toxin Production in the Cyanobacterium Microcystis: Isolation of the Toxic Protease Inhibitor Cyanopeptolin 1020
Gademann, K; Portmann, C; Blom, J F; Zeder, M; Jüttner, F (2010). Multiple toxin production in the cyanobacterium microcystis: isolation of the toxic protease inhibitor cyanopeptolin 1020. Journal of Natural Products, 73(5):980-984. Postprint available at: http://www.zora.uzh.ch University of Zurich Posted at the Zurich Open Repository and Archive, University of Zurich. Zurich Open Repository and Archive http://www.zora.uzh.ch Originally published at: Gademann, K; Portmann, C; Blom, J F; Zeder, M; Jüttner, F (2010). Multiple toxin production in the Winterthurerstr. 190 cyanobacterium microcystis: isolation of the toxic protease inhibitor cyanopeptolin 1020. Journal of Natural CH-8057 Zurich Products, 73(5):980-984. http://www.zora.uzh.ch Year: 2010 Multiple toxin production in the cyanobacterium microcystis: isolation of the toxic protease inhibitor cyanopeptolin 1020 Gademann, K; Portmann, C; Blom, J F; Zeder, M; Jüttner, F Gademann, K; Portmann, C; Blom, J F; Zeder, M; Jüttner, F (2010). Multiple toxin production in the cyanobacterium microcystis: isolation of the toxic protease inhibitor cyanopeptolin 1020. Journal of Natural Products, 73(5):980-984. Postprint available at: http://www.zora.uzh.ch Posted at the Zurich Open Repository and Archive, University of Zurich. http://www.zora.uzh.ch Originally published at: Gademann, K; Portmann, C; Blom, J F; Zeder, M; Jüttner, F (2010). Multiple toxin production in the cyanobacterium microcystis: isolation of the toxic protease inhibitor cyanopeptolin 1020. Journal of Natural Products, 73(5):980-984. Multiple toxin production in the cyanobacterium microcystis: isolation of the toxic protease inhibitor cyanopeptolin 1020 Abstract The isolation and structure of cyanopeptolin 1020 (hexanoic acid-Glu-N[-O-Thr-Arg-Ahp-Phe-N-Me-Tyr-Val-]) from a Microcystis strain is reported. -
The Biosynthesis of Rare Homo-Amino Acid Containing Variants of Microcystin by a Benthic Cyanobacterium
The Biosynthesis of Rare Homo-Amino Acid Containing Variants of Microcystin by a Benthic Cyanobacterium Shishido, Tânia Keiko; Jokela, Jouni; Humisto, Anu; Suurnäkki, Suni; Wahlsten, Matti; Alvarenga, Danillo O.; Sivonen, Kaarina; Fewer, David P. Published in: Marine Drugs DOI: 10.3390/md17050271 Publication date: 2019 Document version Publisher's PDF, also known as Version of record Document license: CC BY Citation for published version (APA): Shishido, T. K., Jokela, J., Humisto, A., Suurnäkki, S., Wahlsten, M., Alvarenga, D. O., Sivonen, K., & Fewer, D. P. (2019). The Biosynthesis of Rare Homo-Amino Acid Containing Variants of Microcystin by a Benthic Cyanobacterium. Marine Drugs, 17(5), 271. https://doi.org/10.3390/md17050271 Download date: 02. okt.. 2021 marine drugs Article The Biosynthesis of Rare Homo-Amino Acid Containing Variants of Microcystin by a Benthic Cyanobacterium Tânia Keiko Shishido 1,2 , Jouni Jokela 1 , Anu Humisto 1 , Suvi Suurnäkki 1,3, Matti Wahlsten 1 , Danillo O. Alvarenga 1 , Kaarina Sivonen 1 and David P. Fewer 1,* 1 Department of Microbiology, University of Helsinki, Viikinkaari 9, FI-00014 Helsinki, Finland; tania.shishido@helsinki.fi (T.K.S.); jouni.jokela@helsinki.fi (J.J.); anu.humisto@helsinki.fi (A.H.); suvi.a.e.suurnakki@jyu.fi (S.S.); matti.wahlsten@helsinki.fi (M.W.); danillo.oliveiradealvarenga@helsinki.fi (D.O.A.); kaarina.sivonen@helsinki.fi (K.S.) 2 Institute of Biotechnology, University of Helsinki, Viikinkaari 5D, FI-00014 Helsinki, Finland 3 Department of Biological and Environmental Science, University of Jyväskylä, FI-40014 Jyväskylä, Finland * Correspondence: david.fewer@helsinki.fi; Tel.: +358-9-19159270 Received: 1 April 2019; Accepted: 5 May 2019; Published: 7 May 2019 Abstract: Microcystins are a family of chemically diverse hepatotoxins produced by distantly related cyanobacteria and are potent inhibitors of eukaryotic protein phosphatases 1 and 2A. -
Skin,Mucosal and Blood-Brain Barrier Kinetics
FACULTY OF PHARMACEUTICAL SCIENCES DRUG Quality & Registration (DRUQUAR) Lab SKIN, MUCOSAL AND BLOOD-BRAIN BARRIER KINETICS OF MODEL CYCLIC DEPSIPEPTIDES: THE MYCOTOXINS BEAUVERICIN AND ENNIATINS Thesis submitted to obtain the degree of Doctor in Pharmaceutical Sciences Lien TAEVERNIER Promoter Prof. Dr. Bart DE SPIEGELEER FACULTY OF PHARMACEUTICAL SCIENCES Drug Quality & Registration (DruQuaR) Lab SKIN, MUCOSAL AND BLOOD-BRAIN BARRIER KINETICS OF MODEL CYCLIC DEPSIPEPTIDES: THE MYCOTOXINS BEAUVERICIN AND ENNIATINS Lien TAEVERNIER Master of Science in Drug Development Promoter Prof. Dr. Bart DE SPIEGELEER 2016 Thesis submitted to obtain the degree of Doctor in Pharmaceutical Sciences COPYRIGHT COPYRIGHT The author and the promotor give the authorization to consult and to copy parts of this thesis for personal use only. Any other use is limited by the Laws of Copyright, especially the obligation to refer to the source whenever results from this thesis are cited. Ghent, 9th of September 2016 The promoter The author Prof. Dr. Bart De Spiegeleer Lien Taevernier 3 ACKNOWLEDGEMENTS ACKNOWLEDGEMENTS I never could have achieved this work on my own, therefore I wish to thank some very important people and address a few words to them. I consider myself fortunate to know you and I was honoured to be able to work together with you and learn a great deal from all of you. First of all, a special thank you to my promoter Prof. Dr. Bart De Spiegeleer. I am grateful that you gave me the opportunity to pursue my Ph.D. at DruQuaR. Your door was always open for me, even if it did not consider work.