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A Classification of Living and Fossil Genera of Decapod Crustaceans
RAFFLES BULLETIN OF ZOOLOGY 2009 Supplement No. 21: 1–109 Date of Publication: 15 Sep.2009 © National University of Singapore A CLASSIFICATION OF LIVING AND FOSSIL GENERA OF DECAPOD CRUSTACEANS Sammy De Grave1, N. Dean Pentcheff 2, Shane T. Ahyong3, Tin-Yam Chan4, Keith A. Crandall5, Peter C. Dworschak6, Darryl L. Felder7, Rodney M. Feldmann8, Charles H. J. M. Fransen9, Laura Y. D. Goulding1, Rafael Lemaitre10, Martyn E. Y. Low11, Joel W. Martin2, Peter K. L. Ng11, Carrie E. Schweitzer12, S. H. Tan11, Dale Tshudy13, Regina Wetzer2 1Oxford University Museum of Natural History, Parks Road, Oxford, OX1 3PW, United Kingdom [email protected] [email protected] 2Natural History Museum of Los Angeles County, 900 Exposition Blvd., Los Angeles, CA 90007 United States of America [email protected] [email protected] [email protected] 3Marine Biodiversity and Biosecurity, NIWA, Private Bag 14901, Kilbirnie Wellington, New Zealand [email protected] 4Institute of Marine Biology, National Taiwan Ocean University, Keelung 20224, Taiwan, Republic of China [email protected] 5Department of Biology and Monte L. Bean Life Science Museum, Brigham Young University, Provo, UT 84602 United States of America [email protected] 6Dritte Zoologische Abteilung, Naturhistorisches Museum, Wien, Austria [email protected] 7Department of Biology, University of Louisiana, Lafayette, LA 70504 United States of America [email protected] 8Department of Geology, Kent State University, Kent, OH 44242 United States of America [email protected] 9Nationaal Natuurhistorisch Museum, P. O. Box 9517, 2300 RA Leiden, The Netherlands [email protected] 10Invertebrate Zoology, Smithsonian Institution, National Museum of Natural History, 10th and Constitution Avenue, Washington, DC 20560 United States of America [email protected] 11Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543 [email protected] [email protected] [email protected] 12Department of Geology, Kent State University Stark Campus, 6000 Frank Ave. -
BIOPAPUA Expedition Highlighting Deep-Sea Benthic Biodiversity of Papua New- Guinea
Biopapua Expedition – Progress report MUSÉUM NATIONAL D'HISTOIRE NATURELLE 57 rue Cuvier 75005 PARIS‐ France BIOPAPUA Expedition Highlighting deep-sea benthic Biodiversity of Papua New- Guinea Submitted by: Muséum National d'Histoire Naturelle (MNHN) Represented by (co‐PI): Dr Sarah Samadi (Researcher, IRD) Dr Philippe Bouchet (Professor, MNHN) Dr Laure Corbari (Research associate, MNHN) 1 Biopapua Expedition – Progress report Contents Foreword 3 1‐ Our understanding of deep‐sea biodiversity of PNG 4 2 ‐ Tropical Deep‐Sea Benthos program 5 3‐ Biopapua Expedition 7 4‐ Collection management 15 5‐ Preliminary results 17 6‐ Outreach and publications 23 7‐ Appendices 26 Appendix 1 27 NRI, note n°. 302/2010 on 26th march, 2010, acceptance of Biopapua reseach programme Appendix 2 28 Biopapua cruise Report, submitted by Ralph MANA (UPNG) A Report Submitted to School of Natural and Physical Sciences, University of Papua New Guinea Appendix 3 39 Chan, T.Y (2012) A new genus of deep‐sea solenocerid shrimp (Crustacea: Decapoda: Penaeoidea) from the Papua New Guinea. Journal of Crustacean Biology, 32(3), 489‐495. Appendix 4 47 Pante E, Corbari L., Thubaut J., Chan TY, Mana R., Boisselier MC, Bouchet P., Samadi S. (In Press). Exploration of the deep‐sea fauna of Papua New Guinea. Oceanography Appendix 5 60 Richer de Forges B. & Corbari L. (2012) A new species of Oxypleurodon Miers, 1886 (Crustacea Brachyura, Majoidea) from the Bismark Sea, Papua New Guinea. Zootaxa. 3320: 56–60 Appendix 6 66 Taxonomic list: Specimens in MNHN and Taiwan collections 2 Biopapua Expedition – Progress report Foreword Biopapua cruise was a MNHN/IRD deep‐sea cruise in partnership with the School of Natural and Physical Sciences, University of Papua New Guinea. -
Islam and Politics in Madura: Ulama and Other Local Leaders in Search of Influence (1990 – 2010)
Islam and Politics in Madura: Ulama and Other Local Leaders in Search of Influence (1990 – 2010) Islam and Politics in Madura: Ulama and Other Local Leaders in Search of Influence (1990 – 2010) Proefschrift ter verkrijging van de graad van Doctor aan de Universiteit Leiden, op gezag van Rector Magnificus prof.mr. C.J.J.M. Stolker, volgens besluit van het College voor Promoties te verdedigen op woensdag 28 augustus 2013 klokke 13.45 uur door Yanwar Pribadi geboren te Sukabumi in 1978 Promotiecommissie Promotor : Prof. dr. C. van Dijk Co-Promotor : Dr. N.J.G. Kaptein Overige Leden : Prof. dr. L.P.H.M. Buskens Prof. dr. D.E.F. Henley Dr. H.M.C. de Jonge Layout and cover design: Ade Jaya Suryani Contents Contents, ................................................................................ vii A note on the transliteration system, ..................................... xi List of tables and figures, ........................................................ xiii Acknowledgements, ................................................................ xv Maps, ....................................................................................... xviii Chapter 1 Introduction, .......................................................................... 1 Madura: an island of piety, tradition, and violence, .............. 1 Previous studies, ..................................................................... 3 Focus of the study, .................................................................. 9 Methods and sources, ............................................................ -
Delineation of Sedimentary Subbasin and Subsurface Interpretation East Java Basin in the Madura Strait and Surrounding Area Based on Gravity Data Analysis
Bulletin of the Marine Geology, Vol. 34, No. 1, June 2019, pp. 1 to 16 Delineation of Sedimentary Subbasin and Subsurface Interpretation East Java Basin in the Madura Strait and Surrounding Area Based on Gravity Data Analysis Delineasi Subcekungan Sedimen dan Interpretasi Bawah Permukaan Cekungan Jawa Timur Wilayah Selat Madura dan Sekitarnya Berdasarkan Analisis Data Gayaberat Imam Setiadi1, Budi Setyanta2, Tumpal B. Nainggolan1, Joni Widodo1 1 Marine Geological Institute, Jl. Dr. Djundjunan No. 236, Bandung, 40174, Indonesia. 2 Centre for Geological Survey, Jl.Diponegoro No.57. Bandung, 40122, Indonesia. Corresponding author: [email protected] (Received 08 January 2019; in revised form 15 January 2019 accepted 27 March 2019) ABSTRACT: East Java basin is a very large sedimentary basin and has been proven produce hydrocarbons, this basin consists of several different sub-basins, one of the sub-basin is in the Madura Strait and surrounding areas. Gravity is one of the geophysical methods that can be used to determine geological subsurface configurations and delineate sedimentary sub-basin based on density parameter. The purposes of this study are to delineate sedimentary sub-basins, estimate the thickness of sedimentary rock, interpret subsurface geological model and identify geological structures in the Madura Strait and surrounding areas. Data analysis which used in this paper are spectral analysis, spectral decomposition filter and 2D forward modeling. The results of the spectral analysis show that the thickness of sedimentary rock is about 3.15 Km. Spectral decomposition is performed at four different wave numbers cut off, namely (0.36, 0.18, 0.07 and 0.04), each showing anomaly patterns at depth (1 Km, 2 Km, 3 Km and 4 Km). -
Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
A New Classification of the Chirostyloidea (Crustacea: Decapoda: Anomura)
Zootaxa 2687: 56–64 (2010) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2010 · Magnolia Press ISSN 1175-5334 (online edition) A new classification of the Chirostyloidea (Crustacea: Decapoda: Anomura) KAREEN E. SCHNABEL1 & SHANE T. AHYONG2 1National Institute of Water and Atmospheric Research, Private Bag 14901, Kilbirnie, Wellington, New Zealand. E-mail: [email protected] 2Australian Museum, 6 College Street, Sydney, NSW 2010 Australia. E-mail: [email protected] Abstract The high level classification of the Chirostyloidea Ortmann, 1892, is reviewed. Eumunididae Milne-Edwards & Bouvier, 1900, is resurrected for two genera formerly placed in the Chirostylidae Ortmann, 1892, Eumunida Smith, 1883, and Pseudomunida Haig, 1979, based on shared characteristics such as the dorsal carapace striation, presence of supraocular spines of the rostrum, dentition of the mandible, presence of an epipod and an annulated exopod flagellum of maxilliped 1. Three families are now included in the Chirostyloidea: Chirostylidae, Eumunididae and Kiwaidae. Diagnoses are provided for each family as well as a key to the families. The fossil record of the Chirostyloidea is discussed, with putative records of Eumunida in the fossil record referred to the galatheid genus Sadayoshia Baba, 1969. Key words: Galatheoidea, Chirostylidae, Eumunididae, Kiwaidae, adult somatic morphology, larval morphology, fossil record Introduction Recent focus on the phylogeny of Anomura has generated significant molecular phylogenetic information that has challenged the traditional understanding of the marine squat lobsters and porcelain crabs, the Galatheoidea, which comprised the Chirostylidae Ortmann, 1892, Galatheidae Samouelle, 1819, Porcellanidae Haworth, 1825, and Kiwaidae Macpherson, Jones & Segonzac, 2005 (e.g., Ahyong et al. -
Squat Lobsters of the Genus Munida (Crustacea: Decapoda: Anomura: Munididae) from the Ogasawara Islands, with Descriptions of Four New Species
国立科博専報,(47): 339–365,2011年4月15日 Mem. Natl. Mus. Nat. Sci., Tokyo, (47): 339–365, April 15, 2011 Squat Lobsters of the Genus Munida (Crustacea: Decapoda: Anomura: Munididae) from the Ogasawara Islands, with Descriptions of Four New Species Tomoyuki Komai Natural History Museum and Institute, Chiba, 955–2 Aoba-cho, Chuo-ku, Chiba-shi, Chiba 260–8682, Japan E-mail: [email protected] Abstract. The present study reports on the squat lobster genus Munida Leach, 1820 (Anomura: Munididae) collected in the Ogasawara Islands during the Project “Studies on the Origin of Bio- diversity in the Sagami Sea Fossa Magna Element and the Izu-Ogasawara (Bonin) Arc” in 2006–2010, carried out by the National Museum and Nature and Science. Six species were iden- tified, including four new species: M. disiunctus sp. nov., M. honshuensis Benedict, 1902, M. koyo sp. nov., M. longinquus sp. nov., M. munin sp. nov., and M pectinata Macpherson and Ma- chordom, 2005. The two previously described species are newly recorded from the area, of them M. pectinata is first recorded from waters outside New Caledonia. Affinities of the four new spe- cies are discussed. Key words: Crustacea, Munididae, Munida, new species, Ogasawara Islands Pacific (e.g., Baba, 1988; 1994; 2005; Baba et al., Introduction 2009; Macpherson, 1993; 1994; 1996a; 1996b; The galatheoid fauna of the oceanic Ogasawara 1997; 1999a; 1999b; 2000; 2004; 2006a; 2006b; Islands, located at about 1000 km south of Tokyo, 2009; Macpherson and de Saint Laurent, 1991; central Japan, is little known, although some pub- Macpherson and Baba, 1993; Macpherson and lications have been published (Stimpson, 1858; Machordom, 2005; Machordom and Macpherson, Balss, 1913; Melin, 1939; Miyake and Baba, 2004; Ahyong and Poore, 2004; Ahyong, 2007). -
The Lower Bathyal and Abyssal Seafloor Fauna of Eastern Australia T
O’Hara et al. Marine Biodiversity Records (2020) 13:11 https://doi.org/10.1186/s41200-020-00194-1 RESEARCH Open Access The lower bathyal and abyssal seafloor fauna of eastern Australia T. D. O’Hara1* , A. Williams2, S. T. Ahyong3, P. Alderslade2, T. Alvestad4, D. Bray1, I. Burghardt3, N. Budaeva4, F. Criscione3, A. L. Crowther5, M. Ekins6, M. Eléaume7, C. A. Farrelly1, J. K. Finn1, M. N. Georgieva8, A. Graham9, M. Gomon1, K. Gowlett-Holmes2, L. M. Gunton3, A. Hallan3, A. M. Hosie10, P. Hutchings3,11, H. Kise12, F. Köhler3, J. A. Konsgrud4, E. Kupriyanova3,11,C.C.Lu1, M. Mackenzie1, C. Mah13, H. MacIntosh1, K. L. Merrin1, A. Miskelly3, M. L. Mitchell1, K. Moore14, A. Murray3,P.M.O’Loughlin1, H. Paxton3,11, J. J. Pogonoski9, D. Staples1, J. E. Watson1, R. S. Wilson1, J. Zhang3,15 and N. J. Bax2,16 Abstract Background: Our knowledge of the benthic fauna at lower bathyal to abyssal (LBA, > 2000 m) depths off Eastern Australia was very limited with only a few samples having been collected from these habitats over the last 150 years. In May–June 2017, the IN2017_V03 expedition of the RV Investigator sampled LBA benthic communities along the lower slope and abyss of Australia’s eastern margin from off mid-Tasmania (42°S) to the Coral Sea (23°S), with particular emphasis on describing and analysing patterns of biodiversity that occur within a newly declared network of offshore marine parks. Methods: The study design was to deploy a 4 m (metal) beam trawl and Brenke sled to collect samples on soft sediment substrata at the target seafloor depths of 2500 and 4000 m at every 1.5 degrees of latitude along the western boundary of the Tasman Sea from 42° to 23°S, traversing seven Australian Marine Parks. -
Updating the Seabird Fauna of Jakarta Bay, Indonesia
Tirtaningtyas & Yordan: Seabirds of Jakarta Bay, Indonesia, update 11 UPDATING THE SEABIRD FAUNA OF JAKARTA BAY, INDONESIA FRANSISCA N. TIRTANINGTYAS¹ & KHALEB YORDAN² ¹ Burung Laut Indonesia, Depok, East Java 16421, Indonesia ([email protected]) ² Jakarta Birder, Jl. Betung 1/161, Pondok Bambu, East Jakarta 13430, Indonesia Received 17 August 2016, accepted 20 October 2016 ABSTRACT TIRTANINGTYAS, F.N. & YORDAN, K. 2017. Updating the seabird fauna of Jakarta Bay, Indonesia. Marine Ornithology 45: 11–16. Jakarta Bay, with an area of about 490 km2, is located at the edge of the Sunda Straits between Java and Sumatra, positioned on the Java coast between the capes of Tanjung Pasir in the west and Tanjung Karawang in the east. Its marine avifauna has been little studied. The ecology of the area is under threat owing to 1) Jakarta’s Governor Regulation No. 121/2012 zoning the northern coastal area of Jakarta for development through the creation of new islands or reclamation; 2) the condition of Jakarta’s rivers, which are becoming more heavily polluted from increasing domestic and industrial waste flowing into the bay; and 3) other factors such as incidental take. Because of these factors, it is useful to update knowledge of the seabird fauna of Jakarta Bay, part of the East Asian–Australasian Flyway. In 2011–2014 we conducted surveys to quantify seabird occurrence in the area. We identified 18 seabird species, 13 of which were new records for Jakarta Bay; more detailed information is presented for Christmas Island Frigatebird Fregata andrewsi. To better protect Jakarta Bay and its wildlife, regular monitoring is strongly recommended, and such monitoring is best conducted in cooperation with the staff of local government, local people, local non-governmental organization personnel and birdwatchers. -
Invertébrés Benthiques Des Marquises
Invertébrés benthiques des Marquises Bernard Salvat 5 Sylvain Petek 1, Éric Folcher 2, Cécile Debitus 1 pour les éponges Francesca Benzoni 2, Michel Pichon 3 pour les coraux Philippe Bouchet 4, Jean Tröndlé 4, Bernard Salvat 5 pour les mollusques Joseph Poupin 6 pour les crustacés Gustav Paulay 7, François Michonneau 7, John Starmer 7, Nathaniel Evans 7 pour les échinodermes Photo Y. Hubert RÉSUMÉ Les îles Marquises ne présentent plus de formations récifales comme elles en possédaient avant l’ho- locène. Malgré une grande diversité des habitats littoraux et profonds dans un milieu océanique riche en plancton, la richesse en invertébrés est moindre que celles des autres archipels de la Polynésie française. Seuls quelques groupes taxonomiques ont été étudiés; ceux dont les espèces sont de taille conséquente. Le nombre d’espèces d’éponges, coraux, mollusques, crustacés et échinodermes est de près de 1 200 avec une dominance à 90 % des mollusques et des crustacés. En raison d’un iso- lement océanographique, une très forte spéciation s’est développée dans certains groupes comme les mollusques et les crustacés alors qu’elle est nulle pour les coraux et pour l’instant impossible à évaluer pour les éponges. Histoire récifale au cours du quaternaire, habitats particuliers et importants taux d’endémisme de certains groupes font tout l’intérêt de cette faune d’invertébrés des îles Marqui- ses qui est loin d’avoir été bien inventoriée. ABSTRACT The Marquesas Islands have no longer a reef formation as they possessed before the Holocene. Despite an -
Anomura (Crustacea Decapoda) from the Mayotte Region, Western Indian Ocean
ATOLL RESEARCH BULLETIN NO. 593 ANOMURA (CRUSTACEA DECAPODA) FROM THE MAYOTTE REGION, WESTERN INDIAN OCEAN Joseph Poupin, Jean-Marie Bouchard, Vincent Dinhut, Régis Cleva, and Jacques Dumas ANOMURA (CRUSTACEA DECAPODA) FROM THE MAYOTTE REGION, WESTERN INDIAN OCEAN Joseph Poupin, Jean-Marie Bouchard, Vincent Dinhut, Régis Cleva and Jacques Dumas Atoll Research Bulletin No. 593 23 October 2013 All statements made in papers published in the Atoll Research Bulletin are the sole responsibility of the authors and do not necessarily represent the views of the Smithsonian Institution or of the editors of the Bulletin. Articles submitted for publication in the Atoll Research Bulletin should be original papers and must be made available by authors for open access publication. Manuscripts should be consistent with the “Author Formatting Guidelines for Publication in the Atoll Research Bulletin.” All submissions to the Bulletin are peer reviewed and, after revision, are evaluated prior to acceptance and publication through the publisher’s open access portal, Open SI (http://opensi.si.edu). Published by SMITHSONIAN INSTITUTION SCHOLARLY PRESS P.O. Box 37012, MRC 957 Washington, D.C. 20013-7012 www.scholarlypress.si.edu The rights to all text and images in this publication are owned either by the contributing authors or third parties. Fair use of materials is permitted for personal, educational, or noncommercial purposes. Users must cite author and source of content, must not alter or modify the content, and must comply with all other terms or restrictions that may be applicable. Users are responsible for securing permission from a rights holder for any other use. ISSN: 0077-5630 (online) i CONTENT CONTENT ............................................................................................................................. -
An Investigation of Madura Island, Indonesia
What does Tourism Mean to Residents? An Investigation of Madura Island, Indonesia Dian Yulie Reindrawati BSocSc, MM Thesis submitted for the Degree of Doctor of Philosophy The University of Newcastle August 2013 STATEMENT OF ORIGINALITY This thesis contains no material which has been accepted for the award of any other degree or diploma in any university or other tertiary institution and, to the best of my knowledge and belief, contains no material previously published or written by another person, except where due reference has been made in the text. I give consent to the final version of my thesis being made available worldwide when deposited in the University’s Digital Repository**, subject to the provisions of the Copyright Act 1968. **Unless an Embargo has been approved for a determined period. Dian Yulie Reindrawati: _____________________________ ii ACKNOWLEDGEMENTS Thanks to Allah Almighty for all His endless blessings. The completion of this thesis was only possible because I had the support and assistance of many individuals. First and foremost, I would like to express my sincerest appreciation to my supervisors: Associate Professor Dr. Kevin Lyons and Dr. Tamara Young for the valuable feedback and constructive criticism on my work. The support you have both given me has been exceptional. I wish to extend my sincere appreciation to Dr. Patricia Johnson for insightful comments, and to Prof. Dr. Kevin Markwell for bringing me to Newcastle for my PhD journey. Thankfulness is also expressed to Prof. Dr. Alison Dean, Dr. Patricia Stanton, Associate Professor Dr. Suzanne Ryan and Michael Romeo for their constant support. I also wish to thank Dr.