Protein‐Engineered Functional Materials

Total Page:16

File Type:pdf, Size:1020Kb

Protein‐Engineered Functional Materials REVIEW Engineered Proteins www.advhealthmat.de Protein-Engineered Functional Materials Yao Wang, Priya Katyal, and Jin Kim Montclare* temperature, pH, or ionic strength. These Proteins are versatile macromolecules that can perform a variety of functions. triggers can further modulate the design In the past three decades, they have been commonly used as building blocks to and synthesis of novel biomaterials with generate a range of biomaterials. Owing to their flexibility, proteins can either increasingly complex functions. Because of their versatile nature, proteins can be be used alone or in combination with other functional molecules. Advances combined with a variety of other materials in synthetic and chemical biology have enabled new protein fusions as well as to create materials with novel functionali- the integration of new functional groups leading to biomaterials with emergent ties. Additionally, the inherent property of properties. This review discusses protein-engineered materials from the per- proteins to self-assemble has paved the spectives of domain-based designs as well as physical and chemical approaches ways to generate new protein assemblies. By precisely controlling the self-assembly for crosslinked materials, with special emphasis on the creation of hydrogels. of proteins, novel architectures with Engineered proteins that organize or template metal ions, bear noncanonical improved functional properties can be amino acids (NCAAs), and their potential applications, are also reviewed. designed.[3] The increasing interest in self-assembly of proteins has contributed significantly to 1. Introduction the development of biomaterials. These self-assembled protein based materials have a wide range of biomedical applications in Proteins are multifunctional macromolecules that regulate tissue engineering, biosensors, drug delivery, medical imaging, a number of biological processes and pathways.[1,2] With the gene therapies and protein therapeutics.[4–10] The properties of recent advances in protein engineering including synthetic proteins can be dynamically regulated by the organization or and chemical biology, new variants have been designed with templation of inorganic metal ions and more recently by intro- improved or novel functionalities. The diverse properties of ducing noncanonical amino acids (NCAAs).[11,12] proteins make them excellent candidates for building new bio- In this review, we highlight various recombinant proteins materials. Over the past few decades, continuous efforts have with a particular focus on their ability to assemble into various been made to develop protein engineered materials, capable of structures. In the following sections, we discuss functional replacing synthetic polymers, owing to their biocompatible and materials from the perspectives of domain-based designs as biodegradable properties.[1] well as physically and chemically crosslinked materials, with There are several advantages associated with the use of special emphasis on the design of hydrogels. In addition, we protein-based materials. The proteins can undergo conforma- review protein engineered materials bearing sequences for tional changes based on external stimuli, such as changes in metal crystallization and noncanonical amino acids, and their potential applications. Y. Wang, Dr. P. Katyal, Prof. J. K. Montclare Department of Chemical and Biomolecular Engineering New York University 2. Domain-Based Protein Engineered Materials Tandon School of Engineering Brooklyn, NY 11201, USA 2.1. Single Domain Protein Engineered Materials E-mail: [email protected] Prof. J. K. Montclare Single domain protein engineered materials are comprised of Department of Chemistry sequences that are derived from a single protein conformation. New York University While the sequences of single domain protein may vary with sim- New York, NY 10003, USA ilar or different repeats, the conformation of the domain remains Prof. J. K. Montclare Department of Biomaterials singular. In this section, we describe such single domains that New York University College of Dentistry can interact with each other to form hydrogel networks. New York, NY 10010, USA Prof. J. K. Montclare Department of Radiology 2.1.1. Elastin New York University School of Medicine New York, NY 10016, USA Elastin is a major component of the extracellular matrix The ORCID identification number(s) for the author(s) of this article can be found under https://doi.org/10.1002/adhm.201801374. (ECM) that directly impacts the elasticity of blood vessels and overall movement of joints and limbs.[13] Inspired by the DOI: 10.1002/adhm.201801374 natural protein, tailor-made elastin-like polypeptides (ELPs) Adv. Healthcare Mater. 2019, 8, 1801374 1801374 (1 of 33) © 2019 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim www.advancedsciencenews.com www.advhealthmat.de Yao Wang was born in Beijing, China, and holds a bachelor’s degree in polymer materials. In 2015, she finished her M.S. in materials science and engineering at the University of Florida. The same year in September, she joined New York University Tandon School of Engineering where she is currently pur- suing her Ph.D. in materials chemistry. Her work focuses on patternable environmen- tally responsive hydrogels derived from protein tri-block copolymers for biomedical applications. Priya Katyal completed her Ph.D. in pharmaceutical sciences from the University of Connecticut, where she investigated protein–protein and protein–polymer interac- Figure 1. Plot showing the inverse phase transition of ELPs. Reproduced tions using biophysical and [14] with permission. Copyright 2014, John Wiley and Sons. biochemical approaches. She is a postdoctoral fellow in consisting of pentapeptide sequences have been investigated Professor Montclare’s lab at for their remarkable elasticity and self-assembling properties New York University, Tandon [14] (Figure 1). These properties render ELPs useful for applica- School of Engineering. Her tions in tissue engineering,[15,16] as drug delivery systems,[17–19] research is focused on developing self-assembled inject- and as probes for bioimaging applications.[16,20,21] able hydrogels for post-traumatic osteoarthritis. ELPs are comprised of a pentapeptide sequence, Val-Pro- Gly-Xaa-Gly or (VPGXG) , where ‘Xaa’ is an interchangeable n Jin Kim Montclare is a pro- amino acid (except proline) and “n” is the number of repeating fessor in the Department of units; the properties of ELPs can be tuned by varying Xaa or n Chemical and Biomolecular (Table 1).[16,22] The glycine and proline residues of ELPs main- Engineering at NYU Tandon tain the structure and function of elastin. ELPs exhibit a unique School of Engineering. lower critical solution temperature (LCST), which is also She has appointments referred to as the inverse transition temperature (T ); below t in biochemistry at SUNY their T , ELPs are soluble in aqueous solution and as the tem- t Downstate Medical Center, perature increases beyond T , ELPs undergo phase separation t chemistry at NYU, radiology and form aggregates.[23] Introduction of hydrophobic residues at NYU School of Medicine, at the “Xaa” position decreases T while ionic and polar residues t and biomaterials at NYU increase T . By varying the guest residue, it is possible to tune t College of Dentistry. Professor the ELP transition temperature from 0 to 60 C.[24,25] ° Montclare is performing groundbreaking research in The transition temperature of ELPs is also influenced by engineering proteins to mimic nature and, in some cases, their amino acid sequence, chain length, buffer concentration, work better than nature. She exploits nature’s biosyn- and polypeptide concentration.[26] Chilkoti and co-workers have thetic machinery and evolutionary mechanisms to design designed ELPs that form injectable depots capable of providing new artificial proteins. Her lab focuses on two research sustained release of peptide therapeutics.[22] Additionally, ELP areas: 1) developing protein biomaterials capable of self- solution when mixed with chondrocytes, result in the formation assembling into supramolecular structures and 2) engi- of coacervates that can maintain the cell viability (Figure 2a).[27] neering functional proteins/enzymes for particular The Chilkoti group has precisely tuned the T by varying the t substrates with the aim of targeting human disorders, drug guest residue and ELP chain length (Figure 2b) using recom- delivery and tissue regeneration. binant DNA techniques.[28] They have proposed a model that can predict the Tt of ELPs (Table 1) with the sequence repeats of VPGVG and VPGAG across a range of molecular weights and The Conticello group has generated different types of BAB chain lengths.[28] These studies have allowed the design of new (Table 1) elastin-based triblock protein polymers, capable of ELPs for applications in medicine and biotechnology.[22,26] forming thermoplastic elastomer hydrogels (Figure 3).[29,30] Adv. Healthcare Mater. 2019, 8, 1801374 1801374 (2 of 33) © 2019 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim www.advancedsciencenews.com www.advhealthmat.de Table 1. Sequences of single domain proteins. Type of protein Name of protein Sequence Reference Elastin Protein Elastin Like Proteins (VPGVG)n [24] (ELPs) (VPGAG)n[(VPGIG)2(VPGKG)(VPGIG)2] [16] [139] [MSKGPG-(XGVPG)n-Y or WP] [26] ELP[V5A2G3] -n [28] ELP[V1A8G7] -n ELP[V5]-n *n = length of the pentapeptide BAB Thermoplastic Two BAB sequences: [30] Elastomer Hydrogels VPAVG[(IPAVG)4(VPAVG)]16IPAVG}-[VPGVG[(VPGVG)2VPGEG(VPGVG)2]30VPGVG]{VPAVG[(
Recommended publications
  • Nov07 NUCLEUS Aa4b
    DED UN 18 O 98 F http://www.nesacs.org N Y O T R E I T H C E N O A E S S S L T A E A C R C I N S M S E E H C C TI N O CA March 2010 Vol. LXXXVIII, No. 7 N • AMERI Monthly Meeting Richards Medal Award Meeting at Harvard Richards Award to Professor Richard N. Zare Book Review Echoes of Life: What Fossil Molecules Reveal about Earth’s History Reviewed by Mindy Levine Summer Scholar Report By Rita E. Ciambra, Eva Vennmann, Katherine H. Schiavoni, and Ekaterina Pletneva My Internship Experiences By Rajeev Chorghade 2 The Nucleus March 2010 The Northeastern Section of the American Chemical Society, Inc. Contents Office: Anna Singer, 12 Corcoran Road, Burlington, MA 01803, 1-800-872-2054 Book Review 4 (Voice or FAX) or 781-272-1966. __________________________________________ e-mail: [email protected] Echoes of Life: What Fossil Molecules Reveal about Earth’s History Any Section business may be conducted via the business office above. Reviewed by Mindy Levine NESACS Homepage: Monthly Meeting 5 http://www.NESACS.org _______________________________________ David Cunningham, Webmaster Richards Medal Award Meeting at Harvard ACS Hotline, Washington, D.C.: 1-800-227-5558 Award to Richard N. Zare, Stanford University Officers 2010 13th Weinberg Symposium Report 6 _________________________ Chair: John McKew Announcements 6,7 Wyeth Research ______________________________________ 200 Cambridge Park Drive Norris and Richards Undergraduate Research Scholarships Cambridge, MA 02140 2010 NESACS Candidates for Election 617-665-5603; jmckew(at)wyeth.com My Internship Experiences 8 Chair-Elect: _______________________________ Patrick M.
    [Show full text]
  • Undergraduate Summer Research Program Research Abstracts
    Fourteenth Annual Undergraduate Summer Research Program Research Abstracts 2020 NYU Tandon School of Engineering’s Undergraduate Summer Research Program (UGS- RP) provides a unique opportunity for NYU Tandon, NYU Abu Dhabi, NYU Shanghai, NYU College of Arts and Science + NYU Tandon Dual Degree Program, and other select students to engage in research over the course of the summer semester. This program offers far more than the traditional classroom experience; it allows students to work alongside OF TABLE faculty mentors as well as PhD and masters students on cutting-edge research projects. Aside from this, they get to interact with other students of all different levels from various fields of study within NYU and outside of it over a 10-week period. Aiming to enhance and broaden students’ knowledge base by applying classroom learning to solve practical and contemporary problems, this program better prepares them for lifelong learning. Close interaction with faculty and research staff promotes an educational experience that advances Tandon’s i2e Technology, Culture, Society model of invention, innovation and entrepreneurship. As such, Tandon’s faculty participation in this program is 4 essential. Along with the faculty, other Research Staff have extensively mentored the students, helping them to learn what research is and what the best practices are for their specific subject areas. In addition to the research NYU Langone Health (Population Health) & Civil/Urban performed, students participate in various workshops, lectures, and seminars throughout the summer. Matthew 8 Eng. Frenkel and Azure Stewart were involved in the program through the provision of the Student2Scholar (S2S) Series. A tremendous thanks to both them and the other guest speakers and lectures that provided the students Mechanical and Aerospace Engineering with pertinent information and resources to ensure their future success.
    [Show full text]
  • Visualizing Better Cancer Treatment
    PRESS OFFICE • 1 MetroTech Center, 19th Floor, Brooklyn, NY 11201 CONTACT • Kathleen Hamilton 646.997.3792 / mobile 347.843.9782 [email protected] Immediate Release Visualizing better cancer treatment NYU researchers engineer a protein micelle that can be visualized by MRI as it delivers hemotherapeutics BROOKLYN, New York, Wednesday, March 20, 2019 – A team of researchers from New York University has engineered nanoscale protein micelles capable of both delivering chemotherapeutic drugs and of being tracked by magnetic resonance imaging (MRI). The innovation falls into the category of “theranostics,” meaning that it combines diagnostic capability and drug delivery, allowing researchers to administer therapy while also non-invasively monitoring the therapeutic progress and drastically reducing the need for surgical intervention. The team is led by NYU Tandon School of Engineering Professor of Chemical and Biomolecular Engineering Jin Kim Montclare, who says: “Think of the analogy of a missile aimed at a target, with the chemotherapeutic drug as the missile and the cancer cells as the target. It’s not enough to aim blindly; you need to carefully track the missile’s progress and determine to what extent it is effective.” Her research paper, “Protein Engineered Nanoscale Micelles for Dynamic Magnetic Resonance and Therapeutic Drug Delivery," was published in the American Chemical Society journal ACS Nano. It was co-authored by Radiology Associate Professor Youssef Wadhghiri at the Center for Advanced Imaging Innovation and Research and the Center for Biomedical Imaging, both at the NYU School of Medicine; Lindsay Hill, a student working with both professors; Priya Katyal, a postdoctoral researcher in Montclare’s lab; Minh Hoang and Zakia Youss, both researchers working with Wadhghiri; Joseph Frezzo, Cynthia Xu, and Xuan Xie, all former students of Montclare; and Erika Delgado-Fukushima, an undergraduate student in her lab.
    [Show full text]
  • Invited Speakers Include: Symposium Organizers
    Symposium BI01: Incorporating Sustainability into Materials Science Education, Training and Public Outreach Materials science is central to the sustainable development of new products and processes, from applications spanning clean energy technologies to water purification, to industrial-scale processes that are energy-efficient and benign to the environment and human health. The COVID-19 pandemic has emphasised the importance of materials science and how it scaffolds humanity. Meeting the challenges of sustainable development will require a materials science workforce that is well-educated and trained in the principles of sustainability and how they interface with the broader context of related scientific fields, industrial-scale up, socioeconomics, and policy. Since sustainable technologies must ultimately be adopted by the public to be successful, public perception and outreach are also critical components to enabling a sustainable future. Many of the 17 United Nations Sustainable Development Goals (UN SDGs), which originated at the United Nations Conference on Sustainable Development in 2012, intersect with the field of materials science. The UN SDGs also inform and underpin the research funding landscape, and represent an opportunity for companies, NGO’s and university researchers and educators to contribute to sustainable development. This symposium will bring together materials researchers and educators, industry and sustainability leaders, and science communications and outreach specialists. They will share and explore innovative
    [Show full text]
  • Ninth Annual Undergraduate Summer Research Program Introduction
    NINTH ANNUAL UNDERGRADUATE SUMMER RESEARCH PROGRAM INTRODUCTION NYU School of Engineering’s Undergraduate Summer Research Program provides a unique opportunity for NYU SOE, NYU College of Arts and Science, NYU Abu Dhabi, and other select students to engage in research over the course of the summer. This program offers students far more than the traditional classroom experience; it allows them to work alongside faculty mentors on cutting-edge research projects. Close interaction with faculty and research staff promotes an educational experience that advances the i2e model of invention, innovation and entrepreneurship. Undergraduate students are afforded the opportunity to conduct research as paid interns during this 10-week period. The program aims to enhance and broaden student’s knowledge base by applying classroom learning to solve practical and contemporary problems and to better prepare them for lifelong learning. Summer 2015 marked the ninth year of the Undergraduate Summer Research Program. Since its inception, 484 students have participated in and a number of faculty members have contributed to the program. In addition to their work in labs, students attended seminars on entrepreneurship, research panels, and diversity in STEM. Additionally, students presented their work-in-progress to other members of the research cohort at a special presentation event dedicated to practicing presentation skills and fostering inter-group collaboration on current and future projects. The School of Engineering’s faculty participation in this program was essential, as was the financial support provided by faculty mentors. The gifts from several alumni donors have also propelled the program’s success. I would like to thank Dr.
    [Show full text]
  • 53Rd MACUB FALL 2020 Conference
    Metropolitan Association of College and University Biologists 53rd MACUB FALL 2020 Conference Keynote Speakers OCTOBER 31 Viruses, Vaccines, and Vectors 9-9:45am 9AM-2PM Vincent Racaniello, Ph.D. To register and for Professor of MIcrobIology and Immunology at Columbia UnIversity’s College of Physicians and the zoom link email: Surgeons and founder of “TWIV---ThIs Week in VIrology” podcast [email protected] RegIster by sendIng an e-maIl with subject “MACUB RegIstratIon” and, In body of e-maIl, your full name, title, faculty or student, and school name to Kathleen Nolan. Member presentatIons 10-11am Health InequItIes in the Age of Poster sessIons COVID-19 1-1:45pm Shamard Charles, M.D., MPH. 11 AM-12:30pm Assistant Professor of Health PromotIon, St. Francis College, NBC News Health JournalIst Award Ceremony 2pm 1 WELCOME TO THE 53rd Annual MetropolItan AssocIatIon of College and UnIversity BIologIsts MACUB Conference! We hope to have a great day for you! 9-9:05 AM. IntroductIon of speaker by Kathleen A. Nolan, Ph.D., President of MACUB 9:05-9:50 AM. Keynote Speaker: Vincent Racaniello, Ph.D., ColumbIa UnIversity “Viruses, Vaccines, and Vectors” 10-11AM---------Member presentatIons---Stay In the MaIn Room 11 AM-11:10 AM---MaIn Room--IntroductIon to Poster Session by Allen Burdowski, Ph.D., Dean of Science and Health, St. FrancIs College 11:10 AM-12:30 PM---Poster presentatIons and Student MInglIng In 4 separate Zoom Rooms: (see below) 12:30-1 PM—Lunch break on your own 1-1:45 PM—Second Keynote Speaker: Shamard Charles, M.D., St.
    [Show full text]
  • Thermoresponsive Protein-Engineered Coiled-Coil Hydrogel for Sustained Small Molecule Release † ‡ § ∥ ⋈ † ⋈ † † † Lindsay K
    Article Cite This: Biomacromolecules 2019, 20, 3340−3351 pubs.acs.org/Biomac Thermoresponsive Protein-Engineered Coiled-Coil Hydrogel for Sustained Small Molecule Release † ‡ § ∥ ⋈ † ⋈ † † † Lindsay K. Hill, , , , , Michael Meleties, , Priya Katyal, Xuan Xie, Erika Delgado-Fukushima, † † ⊥ ⊥ # Teeba Jihad, Che-Fu Liu, Sean O’Neill, Raymond S. Tu, P. Douglas Renfrew, # ∇ ○ § ∥ † ∥ ◆ ¶ Richard Bonneau, , , Youssef Z. Wadghiri, , and Jin Kim Montclare*, , , , † Department of Chemical and Biomolecular Engineering, New York University Tandon School of Engineering, Brooklyn, New York 11201, United States ‡ Department of Biomedical Engineering, SUNY Downstate Medical Center, Brooklyn, New York 11203, United States § ∥ Center for Advanced Imaging Innovation and Research (CAI2R) and Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, New York 10016, United States ⊥ Chemical Engineering Department, The City College of New York, 160 Convent Avenue, New York, New York 10031, United States (UTC). # Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, New York 10010, United States ∇ Center for Genomics and Systems Biology, New York University, New York, New York 10003, United States ○ Computer Science Department, Courant Institute of Mathematical Sciences, New York University, New York, New York 10009, United States ◆ Department of Chemistry, New York University, New York, New York 10012, United States o legitimately share published articles. ¶ Department of Biomaterials, New York University College of Dentistry, New York, New York 10010, United States *S Supporting Information Downloaded via NEW YORK UNIV on September 13, 2019 at 16:05:26 ABSTRACT: Thermoresponsive hydrogels are used for an array of biomedical applications. Lower critical solution See https://pubs.acs.org/sharingguidelines for options on how t temperature-type hydrogels have been observed in nature and extensively studied in comparison to upper critical solution temperature (UCST)-type hydrogels.
    [Show full text]