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Taxonomic Assessment of Lumbricidae (Oligochaeta) Earthworm Genera Using DNA Barcodes
European Journal of Soil Biology 48 (2012) 41e47 Contents lists available at SciVerse ScienceDirect European Journal of Soil Biology journal homepage: http://www.elsevier.com/locate/ejsobi Original article Taxonomic assessment of Lumbricidae (Oligochaeta) earthworm genera using DNA barcodes Marcos Pérez-Losada a,*, Rebecca Bloch b, Jesse W. Breinholt c, Markus Pfenninger b, Jorge Domínguez d a CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Campus Agrário de Vairão, 4485-661 Vairão, Portugal b Biodiversity and Climate Research Centre, Lab Centre, Biocampus Siesmayerstraße, 60323 Frankfurt am Main, Germany c Department of Biology, Brigham Young University, Provo, UT 84602-5181, USA d Departamento de Ecoloxía e Bioloxía Animal, Universidade de Vigo, E-36310, Spain article info abstract Article history: The family Lumbricidae accounts for the most abundant earthworms in grasslands and agricultural Received 26 May 2011 ecosystems in the Paleartic region. Therefore, they are commonly used as model organisms in studies of Received in revised form soil ecology, biodiversity, biogeography, evolution, conservation, soil contamination and ecotoxicology. 14 October 2011 Despite their biological and economic importance, the taxonomic status and evolutionary relationships Accepted 14 October 2011 of several Lumbricidae genera are still under discussion. Previous studies have shown that cytochrome c Available online 30 October 2011 Handling editor: Stefan Schrader oxidase I (COI) barcode phylogenies are informative at the intrageneric level. Here we generated 19 new COI barcodes for selected Aporrectodea specimens in Pérez-Losada et al. [1] including nine species and 17 Keywords: populations, and combined them with all the COI sequences available in Genbank and Briones et al. -
A Case Study of the Exotic Peregrine Earthworm Morphospecies Pontoscolex Corethrurus Shabnam Taheri, Céline Pelosi, Lise Dupont
Harmful or useful? A case study of the exotic peregrine earthworm morphospecies Pontoscolex corethrurus Shabnam Taheri, Céline Pelosi, Lise Dupont To cite this version: Shabnam Taheri, Céline Pelosi, Lise Dupont. Harmful or useful? A case study of the exotic peregrine earthworm morphospecies Pontoscolex corethrurus. Soil Biology and Biochemistry, Elsevier, 2018, 116, pp.277-289. 10.1016/j.soilbio.2017.10.030. hal-01628085 HAL Id: hal-01628085 https://hal.archives-ouvertes.fr/hal-01628085 Submitted on 5 Jan 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Harmful or useful? A case study of the exotic peregrine earthworm MARK morphospecies Pontoscolex corethrurus ∗ ∗∗ S. Taheria, , C. Pelosib, L. Duponta, a Université Paris Est Créteil, Université Pierre et Marie Curie, CNRS, INRA, IRD, Université Paris-Diderot, Institut d’écologie et des Sciences de l'environnement de Paris (iEES-Paris), Créteil, France b UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026 Versailles, France ABSTRACT Exotic peregrine earthworms are often considered to cause environmental harm and to have a negative impact on native species, but, as ecosystem engineers, they enhance soil physical properties. Pontoscolex corethrurus is by far the most studied morphospecies and is also the most widespread in tropical areas. -
&WILDLIFE Tlmber/FISH/WILDLIFE ECOREGION BIOASSESSMENT
53 TFW-WQl l-92-001 &WILDLIFE TlMBER/FISH/WILDLIFE ECOREGION BIOASSESSMENT PILOT PROJECT July 1992 Ecology Publica.tion No. 92-63 prinred on recycled paper The Department of Ecology is an Equal Opportunity and Ajinnative Action employer and shall not discriminate on the basis of race, creed, color, national origin, sex, marital status, sexual orientation, age, religion, or disability as defined by applicable state and/orfederal regulations or statutes. If you have special accommodation needs, please contact the Environmental Investigations and Laboratory Services Program, Wutershed Assessments Section, Barbara Tovrea at (206) 407-6696 (voice). Ecology’s telecommunications device for the deaf (TDD) number at Ecology Headquarters is (206) 407-6006. For additional copies of this publication, please contact: Department of Ecology Publications Disttibutions Ofice at P. 0. Box 47600 Olympia, Washington 98504-7600 (206) 407-7472 Refer to Publication Number 92-6.3 WASHINGTON STATE DEPARTMENT OF ECOLOGY &WILDLIFE TIMBER/FISH/WILDLIFE ECOREGION BIOASSESSMENT PILOT PROJECT by Robert W. Plotnikoff Washington State Department of Ecology Environmental Investigations and Laboratory Services Program Watershed Assessments Section Olympia, Washington 98504-7710 July 1.992 TABLE OF C:ONTENTS LISTOFTABLES . ..iii LIST OF FIGURES . ” . I ,, I . iv ACKNOWLEDGEMENTS .................................... vi ABSTRACT ........................................... .v ii INTRODUCTION Biological Assessment ................................... 1 Integration of Monitoring -
Annelida, Lumbricidae) - Description Based on Morphological and Molecular Data
A peer-reviewed open-access journal ZooKeys 399: A71–87 new (2014) earthworm species within a controversial genus: Eiseniona gerardoi sp. n... 71 doi: 10.3897/zookeys.399.7273 RESEARCH ARTICLE www.zookeys.org Launched to accelerate biodiversity research A new earthworm species within a controversial genus: Eiseniona gerardoi sp. n. (Annelida, Lumbricidae) - description based on morphological and molecular data Darío J. Díaz Cosín1,†, Marta Novo1,2,‡, Rosa Fernández1,3,§, Daniel Fernández Marchán1,|, Mónica Gutiérrez1,¶ 1 Departamento de Zoología y Antropología Física, Facultad de Biología, Universidad Complutense de Madrid, C/ José Antonio Nováis 2, 28040, Madrid, Spain 2 Cardiff School of Biosciences, Cardiff University, BIOSI 1, Museum Avenue, Cardiff CF10, 3TL, UK3 Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA † http://zoobank.org/38538B17-F127-4438-9DE2-F9D6C597D044 ‡ http://zoobank.org/79DA5419-91D5-4EAB-BC72-1E46F10C716A § http://zoobank.org/99618966-BB50-4A01-8FA0-7B1CC31686B6 | http://zoobank.org/CAB83B57-ABD1-40D9-B16A-654281D71D58 ¶ http://zoobank.org/E1A7E77A-9CD5-4D67-88A3-C7F65AD6A5BE Corresponding author: Darío J. Díaz Cosín ([email protected]) Academic editor: R. Blakemore | Received 17 February 2014 | Accepted 25 March 2014 | Published 9 April 2014 http://zoobank.org/F5AC3116-E79E-4442-9B26-2765A5243D5E Citation: Cosín DJD, Novo M, Fernández R, Marchán DF, Gutiérrez M (2014) A new earthworm species within a controversial genus: Eiseniona gerardoi sp. n. (Annelida, Lumbricidae) - description based on morphological and molecular data. ZooKeys 399: 71–87. doi: 10.3897/zookeys.399.7273 Abstract The morphological and anatomical simplicity of soil dwelling animals, such as earthworms, has limited the establishment of a robust taxonomy making it sometimes subjective to authors’ criteria. -
Earthworms (Annelida: Oligochaeta) of the Columbia River Basin Assessment Area
United States Department of Agriculture Earthworms (Annelida: Forest Service Pacific Northwest Oligochaeta) of the Research Station United States Columbia River Basin Department of the Interior Bureau of Land Assessment Area Management General Technical Sam James Report PNW-GTR-491 June 2000 Author Sam Jamesis an Associate Professor, Department of Life Sciences, Maharishi University of Management, Fairfield, IA 52557-1056. Earthworms (Annelida: Oligochaeta) of the Columbia River Basin Assessment Area Sam James Interior Columbia Basin Ecosystem Management Project: Scientific Assessment Thomas M. Quigley, Editor U.S. Department of Agriculture Forest Service Pacific Northwest Research Station Portland, Oregon General Technical Report PNW-GTR-491 June 2000 Preface The Interior Columbia Basin Ecosystem Management Project was initiated by the USDA Forest Service and the USDI Bureau of Land Management to respond to several critical issues including, but not limited to, forest and rangeland health, anadromous fish concerns, terrestrial species viability concerns, and the recent decline in traditional commodity flows. The charter given to the project was to develop a scientifically sound, ecosystem-based strategy for managing the lands of the interior Columbia River basin administered by the USDA Forest Service and the USDI Bureau of Land Management. The Science Integration Team was organized to develop a framework for ecosystem management, an assessment of the socioeconomic biophysical systems in the basin, and an evalua- tion of alternative management strategies. This paper is one in a series of papers developed as back- ground material for the framework, assessment, or evaluation of alternatives. It provides more detail than was possible to disclose directly in the primary documents. -
The Giant Palouse Earthworm (Driloleirus Americanus)
PETITION TO LIST The Giant Palouse Earthworm (Driloleirus americanus) AS A THREATENED OR ENDANGERED SPECIES UNDER THE ENDANGERED SPECIES ACT June 30, 2009 Friends of the Clearwater Center for Biological Diversity Palouse Audubon Palouse Prairie Foundation Palouse Group of the Sierra Club 1 June 30, 2009 Ken Salazar, Secretary of the Interior Robyn Thorson, Regional Director U.S. Department of the Interior U.S. Fish & Wildlife Service 1849 C Street N.W. Pacific Region Washington, DC 20240 911 NE 11th Ave Portland, Oregon Dear Secretary Salazar, Friends of the Clearwater, Center for Biological Diversity, Palouse Prairie Foundation, Palouse Audubon, Palouse Group of the Sierra Club and Steve Paulson formally petition to list the Giant Palouse Earthworm (Driloleirus americanus) as a threatened or endangered species pursuant to the Endangered Species Act (”ESA”), 16 U.S.C. §1531 et seq. This petition is filed under 5 U.S.C. 553(e) and 50 CFR 424.14 (1990), which grant interested parties the right to petition for issuance of a rule from the Secretary of Interior. Petitioners also request that critical habitat be designated for the Giant Palouse Earthworm concurrent with the listing, pursuant to 50 CFR 424.12, and pursuant to the Administrative Procedures Act (5 U.S.C. 553). The Giant Palouse Earthworm (D. americanus) is found only in the Columbia River Drainages of eastern Washington and Northern Idaho. Only four positive collections of this species have been made within the last 110 years, despite the fact that the earthworm was historically considered “very abundant” (Smith 1897). The four collections include one between Moscow, Idaho and Pullman, Washington, one near Moscow Mountain, Idaho, one at a prairie remnant called Smoot Hill and a fourth specimen near Ellensberg, Washington (Fender and McKey- Fender, 1990, James 2000, Sánchez de León and Johnson-Maynard, 2008). -
Earthworm Eisenia Foetida (Oligochaeta)
Influence of temperature on the reproduction of the earthworm Eisenia foetida (Oligochaeta) A.J. Reinecke and J.R. Kriel Institute for Zoological Research, Potchefstroom University for C.H.E., Potchefstroom An experimental investigation revealed that cocoon produc· Some earthworm species have a potential as organic tion by E. foetida (Oligochaeta) increased linearly with in· waste decomposers, according to various authors crease in temperature in the range 10 to 25 DC. Diurnally fluc (Hartenstein, Neuhauser & Kaplan 1979a). Vermicultu tuating temperature did not h~ve a marked influence on total cocoon production at the temperature levels of 10, 15 and rists and researchers are attempting to utilize these earth 25 DC. A highly significant difference in cocoon production oc worms on a much wider scale than before to decompose curred between a constant temperature of 20 DC and a mean industrial organic waste materials such as pulp, sewage temperature of 20 DC (which fluctuated diurnally between 12 sludge, municipal refuse and agricultural wastes as well and 28 DC). Maximum cocoon production was obtained at as animal manures from dairies and other livestock 25 DC with each worm producing a cocoon every second day. The investigation also showed that temperature does in facilities (Huhta, Ikonen & Vilkamaa 1979). Earthworms fluence the number of hatchlings per cocoon. At a are also cultivated for other reasons such as fishing and temperature of 25 DC fewer worms hatched per cocoon than feeding supplements for poultry, fish and other livestock at 20 DC. (Schulz & Graff 1977, Sabine 1978). S. Afr. J. Zool. 1981, 16: 96 - 100 All of these practices require a fundamental knowledge of earthworm reproduction. -
Oregon Giant Earthworm Scientific Name: Driloleirus Macelfreshi
SPECIES FACT SHEET Common Name : Oregon Giant Earthworm Scientific Name : Driloleirus macelfreshi (Smith 1937) (formerly Megascolides macelfreshi ) Phylum: Annelida Class: Oligochaeta Order: Haplotaxida Family: Megascolecidae Conservation Status Global Status (1989): G1 – critically imperiled National Status (2006): N1 – critically imperiled State Status (Oregon): S1 – critically imperiled IUCN Red List Category: VU - Vulnerable BLM Status: Bureau Sensitive Species (NatureServe 2009) Technical Description : Adult: The Oregon giant earthworm is one of the largest North American earthworms (Wells et al. 1983). It is distinguished by its characteristic large size (up to 1.32 m in length and between .5 and 1 cm in diameter), pale whitish color, and distinctive, floral (lily-like) odor (Fender 2009, pers. comm. ). The clitellum of this species (a swelling of the body towards the head of the worm where the gonads are located) extends from segments 13 to about 22, and there are numerous nephridia (networks of tubules that have an excretory function) on each body segment (Wells et al. 1983). Since immature specimens of this species are not as large, and since there are other large, white, fragrant earthworms in the Willamette Valley which could be mistaken for this taxon, specimen collection and expert identification based on internal anatomy is essential for this species. Fresh (refridgerated) specimens are best for identification (Fender 2009, pers. comm. ). William Fender is the foremost authority on the Oregon giant earthworm, and should be consulted regarding any collected or reported specimens. The use of genetic work for identification of this species is a future possibility (Rosenberg 2009, pers. comm ). There are currently no keys to megascolecid worms in this region (Applegarth 1995), although a complete, technical description can be found in Smith (1937). -
The Potential Detrimental Impact of the New Zealand Flatworm to Scottish
B. Boag and R. Neilson Boag, B. and R. Neilson. The potential detrimental impact of the New Zealand fl atworm to Scottish islands The potential detrimental impact of the New Zealand fl atworm to Scottish islands B. Boag and R. Neilson The James Hutton Institute, Invergowrie, Dundee, Scotland, DD2 5DA, UK. <[email protected]>. Abstract: The New Zealand fl atworm, Arthurdendyus triangulatus, is an alien invasive species in The British Isles and the Faroes. It was probably fi rst introduced after WWII and is an obligate predator of our native earthworms. It was initially considered a curiosity until observations in the 1990s in Northern Ireland found it could signifi cantly reduce earthworm numbers. In 1992, it was scheduled under the Countryside and Wildlife Act 1981 then transferred to the Wildlife and Natural Environment (Scotland) Act in 2011 which makes it an off ence to knowingly distribute the fl atworm. A retrospective survey in Scotland showed that it was detected in botanic gardens, nurseries and garden centres in the 1960s but then spread to domestic gardens then fi nally to farms in the 1990s. Although the geographical distribution of A. triangulatus was initially confi ned to mainland Scotland it was subsequently found established on 30 Scottish Islands. Most of the islands are to the north and west of Scotland and have cool damp climates which are favoured by the New Zealand fl atworm. These islands also generally have relatively poor soils that support grassland farming systems. Evidence from both Northern Ireland and Scotland suggests anecic species of earthworm which occur predominantly in grassland, which help drainage and are a source of food for both animals and birds are at particular risk from the fl atworm. -
(Annelida: Clitellata: Oligochaeta) Earthworms
etics & E en vo g lu t lo i y o h n a P r f y Journal of Phylogenetics & Perez-Losada et al., J Phylogen Evolution Biol 2015, 3:1 o B l i a o n l r o DOI: 10.4172/2329-9002.1000140 u g o y J Evolutionary Biology ISSN: 2329-9002 Research Article Open Access An Updated Multilocus Phylogeny of the Lumbricidae (Annelida: Clitellata: Oligochaeta) Earthworms Marcos Pérez-Losada1-3*, Jesse W Breinholt4, Manuel Aira5 and Jorge Domínguez5 1CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Campus Agrário de Vairão, 4485-661 Vairão, Portugal. 2Computational Biology Institute, George Washington University, Ashburn, VA 20147, USA 3Department of Invertebrate Zoology, US National Museum of Natural History, Smithsonian Institution, Washington, DC 20013, USA 4Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA 5Departamento de Ecoloxía e Bioloxía Animal, Universidade de Vigo, E-36310, Spain Abstract Lumbricidae earthworms dominate agricultural lands and often natural terrestrial ecosystems in temperate regions in Europe. They impact soil properties and nutrient cycling, shaping plant community composition and aboveground food webs. The simplicity of the earthworm body plan has hampered morphology-based classifications and taxonomy; hence current research on Lumbricidae systematic relies mostly on molecular data from multiple or single locus [e.g., cytochrome oxidase subunit I (COI) barcodes] to infer evolutionary relationships, validate taxonomic groups and/or identify species. Here we use multiple nuclear and mitochondrial gene regions (including COI) to generate updated maximum likelihood and Bayesian phylogenies of the family Lumbricidae. We then compare these trees to new COI trees to assess the performance of COI at inferring lumbricid inter-generic relationships. -
Curriculum Vitae (PDF)
CURRICULUM VITAE Steven J. Taylor April 2020 Colorado Springs, Colorado 80903 [email protected] Cell: 217-714-2871 EDUCATION: Ph.D. in Zoology May 1996. Department of Zoology, Southern Illinois University, Carbondale, Illinois; Dr. J. E. McPherson, Chair. M.S. in Biology August 1987. Department of Biology, Texas A&M University, College Station, Texas; Dr. Merrill H. Sweet, Chair. B.A. with Distinction in Biology 1983. Hendrix College, Conway, Arkansas. PROFESSIONAL AFFILIATIONS: • Associate Research Professor, Colorado College (Fall 2017 – April 2020) • Research Associate, Zoology Department, Denver Museum of Nature & Science (January 1, 2018 – December 31, 2020) • Research Affiliate, Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign (16 February 2018 – present) • Department of Entomology, University of Illinois at Urbana-Champaign (2005 – present) • Department of Animal Biology, University of Illinois at Urbana-Champaign (March 2016 – July 2017) • Program in Ecology, Evolution, and Conservation Biology (PEEC), School of Integrative Biology, University of Illinois at Urbana-Champaign (December 2011 – July 2017) • Department of Zoology, Southern Illinois University at Carbondale (2005 – July 2017) • Department of Natural Resources and Environmental Sciences, University of Illinois at Urbana- Champaign (2004 – 2007) PEER REVIEWED PUBLICATIONS: Swanson, D.R., S.W. Heads, S.J. Taylor, and Y. Wang. A new remarkably preserved fossil assassin bug (Insecta: Heteroptera: Reduviidae) from the Eocene Green River Formation of Colorado. Palaeontology or Papers in Palaeontology (Submitted 13 February 2020) Cable, A.B., J.M. O’Keefe, J.L. Deppe, T.C. Hohoff, S.J. Taylor, M.A. Davis. Habitat suitability and connectivity modeling reveal priority areas for Indiana bat (Myotis sodalis) conservation in a complex habitat mosaic. -
Catalogue of the Lumbricidae (Annelida, Clitellata, Lumbricoidea) from South America, with Remarks on the Systematics of the Lumbricina
Catalogue of the Lumbricidae (Annelida, Clitellata, Lumbricoidea) from South America, with remarks on the systematics of the Lumbricina Martin Lindsey CHRISTOFFERSEN Departamento de Sistemática e Ecologia, Universidade Federal da Paraíba, 58059-900, João Pessoa, Paraíba (Brazil) [email protected] Christoffersen M. L. 2011. — Catalogue of the Lumbricidae (Annelida, Clitellata, Lumbricoidea) from South America, with remarks on the systematics of the Lumbricina. Zoosystema 33 (2) : 141-173. DOI: 10.5252/z2011n2a2. ABSTRACT A catalogue of terrestrial Lumbricidae produced 28 nominal taxa (species and subspecies) reported to date from South America. Full synonyms and detailed South American occurrences are provided for each entity. Th is is the fi rst detailed assessment of the distribution of South American Lumbricidae. Bimastos sophiae, known only from Argentina, and Eiseniella tetraedra cerni, known only from Chile, are presently the only taxa restricted to South America. Th e remaining species are widely distributed in temperate regions of the globe. Lumbricinae are of Holarctic origin and are mainly restricted to subtropical latitudes in South America, except for the mountain ranges of the Andes, extending northward into the tropical region up to Colombia and then the mountain ranges extending eastward along the Guayana shield along Venezuela and the Guyanas; in Brazil, lumbricids are restricted to the southern and southeastern states, primarily in KEY WORDS the colder subtropical climate region and mountain ranges. Th e Lumbricina Annelida, Lumbricidae, are megadrile earthworms characterized by a multilayered clitellum, eggs small anthropogenic soil relative to microdriles, gastrulation by emboly, intestinal specializations such as fauna, biodiversity, the typhlosole, a complex circulatory apparatus, two pairs of testicles and sperm cold-adapted species, sacs, and the male pores located at least two segments behind the posterior testes.