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Mu14047supplementary Material 1 Emu 2015 2 doi: 10.1071/MU14047_AC 3 © BirdLife Australia 2015 4 5 Supplementary Material 6 Evolutionary history of birds across southern Australia: structure, history and taxonomic implications of mitochondrial DNA 7 diversity in an ecologically diverse suite of species 8 Gaynor DolmanA,B,C,D and Leo JosephA 9 AAustralian National Wildlife Collection, CSIRO National Research Collections Australia, GPO Box 1700, Canberra ACT 2601, Australia. 10 BAustralian Centre for Evolutionary Biology and Biodiversity, School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia. 11 CMolecular Systematics Unit, Western Australian Museum, Locked Bag 49, Welshpool DC, WA 6986, Australia. 12 DCorresponding author. Email: [email protected] 13 14 Appendix S1. List of specimens analysed, with locality details and GenBank numbers 15 Tissue ID is the tissue identification number of the indicated museum collection; ND2 publication is where the ND2 sequence was first published. 16 Collection: ABTC, Australian Biological Tissue Collection, South Australian Museum, Adelaide; ANSP, Academy of Natural Sciences at Drexel 17 University, Philadelphia; ANWC, Australian National Wildlife Collection, CSIRO, Canberra; SAMA, South Australian Museum, Adelaide; WAM, 18 Western Australian Museum, Perth; State: NSW, New South Wales; NT, Northern Territory; Qld, Queensland; SA, South Australia; Tas., Tasmania; 19 Vic., Victoria; WA, Western Australia. Locality: CP, Conservation Park; I., Island; Mt, Mount; NR, Nature Reserve; Pen., Peninsula; Rd, Road; SF, 20 State Forest; Stn, Station; compass directions are abbreviated N, north; S, south; E, east; W, west; and standard intermediates (NW, north-west and so 21 on). Further details of each specimen can be obtained through the Atlas of Living Australia (available at http://www.ala.org.au, verified 3 December 22 2014) 1 Tissue ND2 GenBank Collection Species State Locality Latitude Longitude ID publication number Nombinnie NR 3 km NW of Lake ANWC 28857 Cinclosoma castanotum NSW Cargelligo –33.091 146.215 This study KM280401 ANWC 28858 Cinclosoma castanotum NSW Round Hill NR 30 km SE of Mt Hope –33.039 146.202 This study KM280402 ANWC 33368 Cinclosoma clarum WA Tamala Stn S of Shark Bay –26.627 113.833 This study KM280403 Goondooloo, 31 km W of Halidon, 110 ANWC 42435 Cinclosoma castanotum SA km E of Adelaide –34.867 139.817 This study KM280404 26 km N of Arkaroola Stn, northern ANWC 48273 Cinclosoma castanotum SA Flinders Range –30.209 139.23 This study KM280405 26 km N of Arkaroola Stn, northern ANWC 48274 Cinclosoma castanotum SA Flinders Range –30.209 139.23 This study KM280406 ANWC 49644 Cinclosoma castanotum NSW Round Hill NR 30 km SE of Mt Hope –32.961 146.111 This study KM280407 ANWC 49654 Cinclosoma castanotum NSW Round Hill NR 30 km SE of Mt Hope –32.961 146.111 This study KM280408 ANSP 22722 Cinclosoma clarum SA Yardea, Gawler Ranges –32.417 134.567 This study KM280409 ANSP 22730 Cinclosoma clarum SA Yardea, Gawler Ranges –32.417 134.567 This study KM280410 ANSP 22732 Cinclosoma clarum SA Yardea, Gawler Ranges –32.417 134.567 This study KM280411 ANWC 51838 Cinclosoma clarum SA Shed Tank Camp, 91 km N of Cook –29.891 130.093 This study KM280412 18.5 km N of Shed Tank Camp, 100 ANWC 51855 Cinclosoma clarum SA km N of Cook –29.724 130.12 This study KM280413 38.9 km N of Shed Tank Camp, 130 ANWC 51857 Cinclosoma clarum SA km N of Cook –29.725 130.12 This study KM280414 5.4 km E of Vokes Hill Corner, Anne ANWC 51955 Cinclosoma clarum SA Beadell Highway –28.577 130.764 This study KM280415 5.4 km E of Vokes Hill Corner, Anne ANWC 51956 Cinclosoma clarum SA Beadell Highway –28.577 130.764 This study KM280416 12.2 km S of Vokes Hill Corner, 254 ANWC 52039 Cinclosoma clarum SA km N of Cook –28.638 130.603 This study KM280417 12.2 km S of Vokes Hill Corner, 254 ANWC 52040 Cinclosoma clarum SA km N of Cook –28.638 130.603 This study KM280418 18.1 km S of Vokes Hill Corner, 247 ANWC 52041 Cinclosoma clarum SA km N of Cook –28.657 130.557 This study KM280419 Irish Well, 21 km SW of highway ANWC 52080 Cinclosoma clarum SA between Oak Valley and Maralinga –29.959 131.093 This study KM280420 6 km NE of Irish Well, 48 km NW of ANWC 52088 Cinclosoma clarum SA Maralinga –29.953 131.074 This study KM280421 ANWC 52089 Cinclosoma clarum SA 6 km NE of Irish Well, 48 km NW of –29.953 131.074 This study KM280422 2 Tissue ND2 GenBank Collection Species State Locality Latitude Longitude ID publication number Maralinga Yellabinna area, 86.6 km NNE of ANWC 52266 Cinclosoma clarum SA Ceduna –31.554 133.978 This study KM280423 91.8 km E of Ilkurlka, Great Victoria ANWC 54215 Cinclosoma clarum WA Desert –28.534 128.281 This study KM280424 96.5 km E of Ilkurlka, Great Victoria ANWC 54218 Cinclosoma clarum WA Desert –28.534 128.329 This study KM280425 70.4 km E of Ilkurlka, Great Victoria ANWC 54225 Cinclosoma clarum WA Desert –28.456 128.091 This study KM280426 48.6 km E of Ilkurlka, Great Victoria ANWC 54232 Cinclosoma clarum WA Desert –28.36 127.957 This study KM280427 56.6 km E of Ilkurlka, Great Victoria ANWC 54234 Cinclosoma clarum WA Desert –28.403 128.018 This study KM280428 SAMA B55864 Cinclosoma clarum SA Yalata –31.983 132.433 This study KM280429 Dolman and ANSP 22679 Climacteris rufus SA Yardea, Gawler Ranges –32.417 134.567 Joseph (2012) JQ027606 Dolman and ANSP 22737 Climacteris rufus SA Yardea, Gawler Ranges –32.417 134.567 Joseph (2012) JQ027607 Dolman and ANSP 22738 Climacteris rufus SA Yardea, Gawler Ranges –32.417 134.567 Joseph (2012) JQ027608 Dolman and JQ027490 ANSP 23086 Climacteris rufus WA Mt Barker –34.65 117.633 Joseph (2012) 10 km S of Yardea Homestead, Gawler Dolman and JQ027602 ANWC 28230 Climacteris rufus SA Ranges –32.426 135.447 Joseph (2012) 10 km S of Yardea Homestead, Gawler Dolman and JQ027601 ANWC 28231 Climacteris rufus SA Ranges –32.426 135.447 Joseph (2012) Dolman and JQ027489 ANWC 31715 Climacteris rufus WA 6 km S of Cuballing –32.846 117.165 Joseph (2012) Brockman SF, 19 km ENE of Dolman and JQ027488 ANWC 31908 Climacteris rufus WA Pemberton –34.459 116.11 Joseph (2012) Dolman and JQ027487 ANWC 31933 Climacteris rufus WA Brockman SF, 15 km E of Pemberton –34.486 116.116 Joseph (2012) Warren River–Treen Brook Junction, Dolman and JQ027486 ANWC 31949 Climacteris rufus WA 9 km SE of Pemberton –34.503 116.003 Joseph (2012) Sinclairs Gap, Middleback Range W of Dolman and JQ027605 ANWC 40316 Climacteris rufus SA Whyalla, Eyre Pen. –33.1 137.142 Joseph (2012) 3 Tissue ND2 GenBank Collection Species State Locality Latitude Longitude ID publication number Sinclairs Gap, Middleback Range W of Dolman and JQ027604 ANWC 40344 Climacteris rufus SA Whyalla, Eyre Pen. –33.1 137.142 Joseph (2012) Dolman and JQ027600 ANWC 46743 Climacteris rufus SA 28 km N of Minnipa, Eyre Pen. –32.641 135.229 Joseph (2012) Dolman and JQ027603 ANWC 46744 Climacteris rufus SA ~28 km N of Minnipa, Eyre Pen. –32.641 135.229 Joseph (2012) Dolman and JQ027599 ANWC 46745 Climacteris rufus SA 28 km N of Minnipa, Eyre Pen. –32.641 135.229 Joseph (2012) Dolman and JQ027491 ANWC 50479 Climacteris rufus WA 28 km E of Norseman –32.104 121.933 Joseph (2012) 150 km W of Vokes Hill Corner, Anne Dolman and JQ027610 ANWC 52012 Climacteris rufus SA Beadell Highway –28.511 129.216 Joseph (2012) 150 km W of Vokes Hill Corner, Anne Dolman and JQ027611 ANWC 52013 Climacteris rufus SA Beadell Highway –28.511 129.216 Joseph (2012) Dolman and JQ027612 ANWC 52055 Climacteris rufus SA Wyola Shed Tank, 167 km N of Cook –29.234 130.2 Joseph (2012) Dolman and JQ027613 ANWC 52060 Climacteris rufus SA Wyola Shed Tank, 167 km N of Cook –29.234 130.2 Joseph (2012) 20.5 km NE of Irish Well, 48 km NW Dolman and ANWC 52138 Climacteris rufus SA of Maralinga –29.898 131.295 Joseph (2012) JQ027614 Dolman and ANWC 52275 Climacteris rufus SA 44 km N of Ceduna on Googs Track –31.44 133.41 Joseph (2012) JQ027609 4 km W of SA border, Great Victoria Dolman and ANWC 54172 Climacteris rufus WA Desert –28.514 128.961 Joseph (2012) JQ027501 4 km W of SA border, Great Victoria Dolman and ANWC 54173 Climacteris rufus WA Desert –28.514 128.961 Joseph (2012) JQ027492 56.6 km E of Ilkurlka, Great Victoria Dolman and ANWC 54228 Climacteris rufus WA Desert –28.403 128.018 Joseph (2012) JQ027493 56.6 km E of Ilkurlka, Great Victoria Dolman and ANWC 54229 Climacteris rufus WA Desert –28.403 128.018 Joseph (2012) JQ027494 56.6 km E of Ilkurlka, Great Victoria Dolman and ANWC 54230 Climacteris rufus WA Desert –28.403 128.018 Joseph (2012) JQ027495 56.6 km E of Ilkurlka, Great Victoria Dolman and ANWC 54231 Climacteris rufus WA Desert –28.403 128.018 Joseph (2012) JQ027496 2.5 km E of Neale Junction, Great Dolman and ANWC 54238 Climacteris rufus WA Victoria Desert –28.304 125.833 Joseph (2012) JQ027497 4 Tissue ND2 GenBank Collection Species State Locality Latitude Longitude ID publication number 1.3 km E of Neale Junction, Great Dolman and ANWC 54320 Climacteris rufus WA Victoria Desert –28.305 125.834 Joseph (2012) JQ027498 5 km E of Neale Junction, Great Dolman and ANWC 54324 Climacteris rufus WA Victoria Desert –28.306 125.835 Joseph (2012) JQ027499 5 km E of Neale Junction, Great Dolman and ANWC 54325 Climacteris rufus WA Victoria Desert –28.306 125.835 Joseph (2012) JQ027500 Round Hill NR, 30 km SE of Mt Dolman and ANWC 28859 Drymodes brunneopygia NSW Hope –32.962 146.112 Joseph (2012) JQ027399 Round Hill NR, 30 km SE of Mt Dolman and ANWC 28863 Drymodes brunneopygia NSW Hope –32.964 146.111 Joseph (2012) JQ027404 Dolman and ANWC 31784 Drymodes
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