The Epidemiology of Sex Chromosome Abnormalities
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Preimplantation Genetic Diagnosis (PGD)
Preimplantation Genetic Diagnosis (PGD) AS3323/5621 Lecture 7 Sept 19, 2017 1 Risks of Fetal Loss A total of 634,272 women and 1,221,546 pregnancy outcomes in Denmark from 1978 to 1992. 2 Anderson et al. BMJ, 2000,320:1708-1712. Meiotic Non-disjunction:% Trisomy? 3 Aneuploidy P centromere Q Abnormal number of chromosomes in a cell. 4 Aneuploidy: the most common cause for early pregnancy failure Prevalence of oocyte and embryo aneuploidy increases with maternal age Also increase in chromosomally normal couples with recurrent early pregnancy loss or repeated failed IVF cycles despite the transfer of high-quality embryos (based on morphology). http://www.asrm.org/uploadedFiles/ASRM_Content/News_and_Publications/Practice_Guidelines/Commi ttee_Opinions/Preimplantation_genetic_testing(1).pdf 5 “Common” Types of Trisomy Trisomy 21 – Down’s Syndrome karyotype 47, XX +21 or 47, XY + 21 frequency ~ 1/600 births Trisomy 18 – Edward’s Syndrome karyotype 47, XX + 18 or 47, XY + 18 Frequency ~ 1 in 10,000 births Sex chromosome trisomies 47, XXY (Klinefelter Syndrome), 1/1,000 males 47, XXX (super females), many un-diagnosed Polysomy X e.g., XXXX Trisomies of other chromosomes partial, mosaic and rare incompatible with life 6 Monosomy • No other live births of full monosomy – abortion • Cancer cells (lymphocytes) • Only partial monosomies in live births • Turner’s Syndrome: XO females 7 Why does aneuploidy lead to fetal death? Gene dosage • Intolerance to deviations from diploid • Extra or missing chromosomes causes developmental defects and/or death (monosomy, trisomy) • Sex chromosomes exception • On the surface 8 Central Dogma of Gene Expression 9 http://cnx.org/contents/Z7qBU2RZ@5/The-Central-Dogma-and-Basic-Tr Gene copy number vs. -
Ring Chromosome 4 49,XXXXY Patients Is Related to the Age of the Mother
228 Case reports placenta and chorionic sacs were of no help for Further cytogenetic studies in twins would be diagnosis. The dermatoglyphs are expected to be necessary to find out whether there is a relation different, even ifthey were monozygotic, in relation to between non-disjunction and double ovulation or the total finger ridge count; since according to whether these 2 events are independent but could Penrose (1967), when the number of X chromosomes occur at the same time by chance. increases, the TFRC decreases in about 30 per each extra X. The difference of 112 found in our case is so We want to thank Dr Maroto and Dr Rodriguez- striking that we believe that we are facing a case of Durantez for performing the cardiological and dizygosity. On the other hand, the blood groups were radiological studies; Dr A. Valls for performing the conclusive. All the systems studied were alike in Xg blood group. We also wish to thank Mrs A. both twins except for the Rh. In the propositus the Moran and Mrs M. C. Cacituaga for their technical phenotype was CCDee while in the brother it was assistance. cCDee, which rules out monozygosity. The incidence of dizygotic twins with noncon- J. M. GARCIA-SAGREDO, C. MERELLO-GODINO, cordant chromosomal aneuploidy appears to be low. and C. SAN ROMAN To the best of our knowledge we think that ours is the From the Department ofHuman Genetics, first reported case of dizygotic twins with this specific Fundacion Jimenez Diaz, Madrid; and anomaly. U.C.I., Hospital Infantil, C.S. -
Chromosome 18
Chromosome 18 Description Humans normally have 46 chromosomes in each cell, divided into 23 pairs. Two copies of chromosome 18, one copy inherited from each parent, form one of the pairs. Chromosome 18 spans about 78 million DNA building blocks (base pairs) and represents approximately 2.5 percent of the total DNA in cells. Identifying genes on each chromosome is an active area of genetic research. Because researchers use different approaches to predict the number of genes on each chromosome, the estimated number of genes varies. Chromosome 18 likely contains 200 to 300 genes that provide instructions for making proteins. These proteins perform a variety of different roles in the body. Health Conditions Related to Chromosomal Changes The following chromosomal conditions are associated with changes in the structure or number of copies of chromosome 18. Distal 18q deletion syndrome Distal 18q deletion syndrome occurs when a piece of the long (q) arm of chromosome 18 is missing. The term "distal" means that the missing piece (deletion) occurs near one end of the chromosome arm. The signs and symptoms of distal 18q deletion syndrome include delayed development and learning disabilities, short stature, weak muscle tone ( hypotonia), foot abnormalities, and a wide variety of other features. The deletion that causes distal 18q deletion syndrome can occur anywhere between a region called 18q21 and the end of the chromosome. The size of the deletion varies among affected individuals. The signs and symptoms of distal 18q deletion syndrome are thought to be related to the loss of multiple genes from this part of the long arm of chromosome 18. -
Klinefelter, Turner & Down Syndrome
Klinefelter, Turner & Down Syndrome A brief discussion of gamete forma2on, Mitosis and Meiosis: h7ps://www.youtube.com/watch?v=zGVBAHAsjJM Non-disjunction in Meiosis: • Nondisjunction "not coming apart" is the failure of a chromosome pair to separate properly during meiosis 1, or of two chromatids of a chromosome to separate properly during meiosis 2 or mitosis. • Can effect each pair. • Not a rare event. • As a result, one daughter cell has two chromosomes or two chromatids and the other has none • The result of this error is ANEUPLOIDY. 4 haploid gametes 2 gametes with diploid 2 gametes with haploid number of x and 2 lacking number of X chromosome, 1 x chromosome gamete with diploid number of X chromosome, and 1 gamete lacking X chromosome MEIOSIS MITOSIS Nondisjunc2on at meiosis 1 = All gametes will be abnormal Nondisjunc2on at meiosis 2 = Half of the gametes are normal (%50 normal and %50 abnormal) Down’s Syndrome • Karyotype: 47, XY, +21 Three copies of chromosome 21 (21 trisomy) • The incidence of trisomy 21 rises sharply with increasing maternal age (above 37), but Down syndrome can also be the result of nondisjunction of the father's chromosome 21 (%15 of cases) • A small proportion of cases is mosaic* and probably arise from a non-disjunction event in early zygotic division. *“Mosaicism, used to describe the presence of more than one type of cells in a person. For example, when a baby is born with Down syndrome, the doctor will take a blood sample to perform a chromosome study. Typically, 20 different cells are analyzed. -
Whole Chromosome Gain Does Not in Itself Confer Cancer-Like Chromosomal Instability
Whole chromosome gain does not in itself confer cancer-like chromosomal instability Anders Valinda,1, Yuesheng Jina, Bo Baldetorpb, and David Gisselssona aDepartment of Clinical Genetics, Lund University, University and Regional Laboratories, Biomedical Center B13, Lund SE22184, Sweden; and bDepartment of Oncology, Lund University, Skåne University Hospital, Lund SE22185, Sweden Edited* by George Klein, Karolinska Institutet, Stockholm, Sweden, and approved November 4, 2013 (received for review June 12, 2013) Constitutional aneuploidy is typically caused by a single-event and chromosomal instability in humans is using constitutional meiotic or early mitotic error. In contrast, somatic aneuploidy, aneuploidy syndromes as a model. Cells from patients with these found mainly in neoplastic tissue, is attributed to continuous syndromes provide a good experimental system for studying the chromosomal instability. More debated as a cause of aneuploidy effects of aneuploidy on overall genome stability on representative is aneuploidy itself; that is, whether aneuploidy per se causes human material. Such cells typically only have a single or a limited chromosomal instability, for example, in patients with inborn set of stem-line chromosome aberrations compared with tumor aneuploidy. We have addressed this issue by quantifying the level cell lines, which typically harbor a multitude of genetic lesions, as of somatic mosaicism, a proxy marker of chromosomal instability, well as a cancer phenotype. The few earlier studies performed on in patients with -
Detection of Turner Syndrome by Quantitative PCR of SHOX and VAMP7 Genes
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Repositorio Academico Digital UANL GENETIC TESTING AND MOLECULAR BIOMARKERS ORIGINAL ARTICLES Volume 19, Number 2, 2015 ª Mary Ann Liebert, Inc. Pp. 1–5 DOI: 10.1089/gtmb.2014.0236 Detection of Turner Syndrome by Quantitative PCR of SHOX and VAMP7 Genes Marisol Ibarra-Ramı´rez,1 Michelle de Jesu´s Zamudio-Osuna,1 Luis Daniel Campos-Acevedo,1 Hugo Leonid Gallardo-Blanco,1 Ricardo Martin Cerda-Flores,2 Ira´m Pablo Rodrı´guez-Sa´nchez,1 and Laura Elia Martı´nez-de-Villarreal1 Turner Syndrome (TS) is an unfavorable genetic condition with a prevalence of 1:2500 in newborn girls. Prompt and effective diagnosis is very important to appropriately monitor the comorbidities. The aim of the present study was to propose a feasible and practical molecular diagnostic tool for newborn screening by quantifying the gene dosage of the SHOX, VAMP7, XIST, UBA1, and SRY genes by quantitative polymerase chain reaction (qPCR) in individuals with a diagnosis of complete X monosomy, as well as those with TS variants, and then compare the results to controls without chromosomal abnormalities. According to our results, the most useful markers for these chromosomal variants were the genes found in the pseudoautosomic regions 1 and 2 (PAR1 and PAR2), because differences in gene dosage (relative quantification) between groups were more evident in SHOX and VAMP7 gene expression. Therefore, we conclude that these markers are useful for early detection in aneuploidies involving sex chromosomes. Introduction Guidelines of the American College of Endocrinology for the management of patients with TS emphasize the benefit of urner syndrome (TS) affects 1 in 2500/3000 live- early detection through newborn screening methods (Bondy Tborn girls and is characterized by short stature, gonadal et al., 2007). -
22Q13.3 Deletion Syndrome
22q13.3 deletion syndrome Description 22q13.3 deletion syndrome, which is also known as Phelan-McDermid syndrome, is a disorder caused by the loss of a small piece of chromosome 22. The deletion occurs near the end of the chromosome at a location designated q13.3. The features of 22q13.3 deletion syndrome vary widely and involve many parts of the body. Characteristic signs and symptoms include developmental delay, moderate to profound intellectual disability, decreased muscle tone (hypotonia), and absent or delayed speech. Some people with this condition have autism or autistic-like behavior that affects communication and social interaction, such as poor eye contact, sensitivity to touch, and aggressive behaviors. They may also chew on non-food items such as clothing. Less frequently, people with this condition have seizures or lose skills they had already acquired (developmental regression). Individuals with 22q13.3 deletion syndrome tend to have a decreased sensitivity to pain. Many also have a reduced ability to sweat, which can lead to a greater risk of overheating and dehydration. Some people with this condition have episodes of frequent vomiting and nausea (cyclic vomiting) and backflow of stomach acids into the esophagus (gastroesophageal reflux). People with 22q13.3 deletion syndrome typically have distinctive facial features, including a long, narrow head; prominent ears; a pointed chin; droopy eyelids (ptosis); and deep-set eyes. Other physical features seen with this condition include large and fleshy hands and/or feet, a fusion of the second and third toes (syndactyly), and small or abnormal toenails. Some affected individuals have rapid (accelerated) growth. -
Turner Syndrome (TS) Is a Genetic Disease That Affects About Physical Signs of TS May Include: 1 in Every 2,500 Female Live Births
Notes: A Guide for Caregivers For easily accessible answers, education, and support, visit Nutropin.com or call 1-866-NUTROPIN (1-866-688-7674). 18 19 of patients with Your healthcare team is your primary source Turner Syndrome of information about your child’s treatment. Please see the accompanying full Prescribing Information, including Instructions for Use, and additional Important Safety Information througout and on pages 16-18. Models used for illustrative purposes only. Nutropin, Nutropin AQ, and NuSpin are registered trademarks, Nutropin GPS is a trademark, and NuAccess is a service mark of Genentech, Inc. © 2020 Genentech USA, Inc., 1 DNA Way, So. San Francisco, CA 94080 M-US-00005837(v1.0) 06/20 FPO Understanding Turner Syndrome What is Turner Syndrome? Turner Syndrome (TS) is a genetic disease that affects about Physical signs of TS may include: 1 in every 2,500 female live births. TS occurs when one • Short stature of a girl’s two X chromosomes is absent or incomplete. • Webbing of the neck Chromosomes are found in all cells of the human body. They contain the genes that determine the characteristics of a • Low-set, rotated ears person such as the color of hair or eyes. Every person has • Arms that turn out slightly at the elbows 22 pairs of chromosomes containing these characteristics, • Low hairline at the back of the head and one pair of sex chromosomes. • A high, arched palate in the mouth Normally cells in a female’s body contain two “X” chromosomes Biological signs of TS may include: (Fig. 1). • Underdevelopment of the ovaries In girls with TS, part or • Not reaching sexual maturity or starting all of one X chromosome a menstrual period (Fig. -
Phenotype Manifestations of Polysomy X at Males
PHENOTYPE MANIFESTATIONS OF POLYSOMY X AT MALES Amra Ćatović* &Centre for Human Genetics, Faculty of Medicine, University of Sarajevo, Čekaluša , Sarajevo, Bosnia and Herzegovina * Corresponding author Abstract Klinefelter Syndrome is the most frequent form of male hypogonadism. It is an endocrine disorder based on sex chromosome aneuploidy. Infertility and gynaecomastia are the two most common symptoms that lead to diagnosis. Diagnosis of Klinefelter syndrome is made by karyotyping. Over years period (-) patients have been sent to “Center for Human Genetics” of Faculty of Medicine in Sarajevo from diff erent medical centres within Federation of Bosnia and Herzegovina with diagnosis suspecta Klinefelter syndrome, azoo- spermia, sterilitas primaria and hypogonadism for cytogenetic evaluation. Normal karyotype was found in (,) subjects, and karyotype was changed in (,) subjects. Polysomy X was found in (,) examinees. Polysomy X was expressed at the age of sexual maturity in the majority of the cases. Our results suggest that indication for chromosomal evaluation needs to be established at a very young age. KEY WORDS: polysomy X, hypogonadism, infertility Introduction Structural changes in gonosomes (X and Y) cause different distribution of genes, which may be exhibited in various phenotypes. Numerical aberrations of gonosomes have specific pattern of phenotype characteristics, which can be classified as clini- cal syndrome. Incidence of gonosome aberrations in males is / male newborn (). Klinefelter syndrome is the most common chromosomal disorder associated with male hypogonadism. According to different authors incidence is / male newborns (), /- (), and even / (). Very high incidence indicates that the zygotes with Klinefelter syndrome are more vital than those with other chromosomal aberrations. BOSNIAN JOURNAL OF BASIC MEDICAL SCIENCES 2008; 8 (3): 287-290 AMRA ĆATOVIĆ: PHENOTYPE MANIFESTATIONS OF POLYSOMY X AT MALES In , Klinefelter et al. -
Oocyte Cryopreservation for Fertility Preservation in Postpubertal Female Children at Risk for Premature Ovarian Failure Due To
Original Study Oocyte Cryopreservation for Fertility Preservation in Postpubertal Female Children at Risk for Premature Ovarian Failure Due to Accelerated Follicle Loss in Turner Syndrome or Cancer Treatments K. Oktay MD 1,2,*, G. Bedoschi MD 1,2 1 Innovation Institute for Fertility Preservation and IVF, New York, NY 2 Laboratory of Molecular Reproduction and Fertility Preservation, Obstetrics and Gynecology, New York Medical College, Valhalla, NY abstract Objective: To preliminarily study the feasibility of oocyte cryopreservation in postpubertal girls aged between 13 and 15 years who were at risk for premature ovarian failure due to the accelerated follicle loss associated with Turner syndrome or cancer treatments. Design: Retrospective cohort and review of literature. Setting: Academic fertility preservation unit. Participants: Three girls diagnosed with Turner syndrome, 1 girl diagnosed with germ-cell tumor. and 1 girl diagnosed with lymphoblastic leukemia. Interventions: Assessment of ovarian reserve, ovarian stimulation, oocyte retrieval, in vitro maturation, and mature oocyte cryopreservation. Main Outcome Measure: Response to ovarian stimulation, number of mature oocytes cryopreserved and complications, if any. Results: Mean anti-mullerian€ hormone, baseline follical stimulating hormone, estradiol, and antral follicle counts were 1.30 Æ 0.39, 6.08 Æ 2.63, 41.39 Æ 24.68, 8.0 Æ 3.2; respectively. In Turner girls the ovarian reserve assessment indicated already diminished ovarian reserve. Ovarian stimulation and oocyte cryopreservation was successfully performed in all female children referred for fertility preser- vation. A range of 4-11 mature oocytes (mean 8.1 Æ 3.4) was cryopreserved without any complications. All girls tolerated the procedure well. -
Turner Syndrome
TURNER SYNDROME What is it? Turner syndrome (TS) is a condition only affecting females as a result of an X chromosome abnormality. TS occurs in approximately 1 in 2,500 newborn females. While one X chromosome is normal, the other female X chromosome is missing or altered. TS is characterized by a variety of medical and developmental problems but the most consistent features affect bone development and growth resulting in short stature and lack of ovarian development. Diagnosis can be made prenatally or in early childhood but over 1/3 of girls diagnosed are diagnosed in mid-childhood or adolescence. A blood test can confirm suspicion of the syndrome. The long term health outcomes are improved with an earlier diagnosis. What are the symptoms or complications? Diagnosis can be made prenatally or during early childhood years. However, over 1/3 of diagnoses occur during adolescence. A blood test can confirm suspicion of the syndrome. Signs and symptoms may be subtle and develop slow over time, or they may be significant. They can occur in varying degrees based on the individual's genetic makeup. Short stature Scoliosis Swelling of hands and feet Recurrent ear infections that may lead to hearing problems Lack of spontaneous puberty Webbed neck Kidney problems e.g. UTI’s Droopy eyelids Heart issues e.g. congenital defects Strabismus Type II Diabetes Low set ears and hairline Hypertension Poor vision Thyroid disease Infertility Lack of stamina A child with TS will not only face medical problems but also learning disabilities. Students with TS often have a cognitive profile that includes normal intelligence and verbal capabilities but weaknesses in the areas of visual–spatial, executive, and social cognitive function. -
Impact of Chromosome 9 Numerical Imbalances in Oral Squamous Cell Carcinoma: a Pilot Grid-Based Centromere Analysis
diagnostics Communication Impact of Chromosome 9 Numerical Imbalances in Oral Squamous Cell Carcinoma: A Pilot Grid-Based Centromere Analysis 1, 1, 2, Efthymios Kyrodimos y , Aristeidis Chrysovergis y , Nicholas Mastronikolis y, Evangelos Tsiambas 3,*, Christos Riziotis 4,5,* , Dimitrios Roukas 6, Panagiotis Fotiades 7, Chara Stavraka 8 , Vasileios Ragos 9, Minas Paschopoulos 10 and Vasileios Papanikolaou 1 1 1st ENT Department, Hippocration General Hospital, University of Athens, 115 27 Athens, Greece; [email protected] (E.K.); [email protected] (A.C.); [email protected] (V.P.) 2 ENT Department, Medical School, University of Patras, 265 04 Patras, Greece; [email protected] 3 Department of Cytopathology, 417 Veterans Army Hospital (NIMTS), 115 21 Athens, Greece 4 Theoretical and Physical Chemistry Institute, Photonics for Nanoapplications Laboratory, National Hellenic Research Foundation, 11635 Athens, Greece 5 Defence & Security Research Institute, University of Nicosia, CY-2417 Nicosia, Cyprus 6 Department of Psychiatry, 417 Veterans Army Hospital (NIMTS), 115 21 Athens, Greece; [email protected] 7 Department of Surgery, 424 General Army Hospital, 564 29 Thessaloniki, Greece; [email protected] 8 Department of Medical Oncology, Guy’s and St Thomas National Health System Foundation Trust, London SE1 9RT, UK; [email protected] 9 Department of Maxillofacial Surgery, Medical School, University of Ioannina, 455 00 Ioannina, Greece; [email protected] 10 Department of Obstetrics and Gynaecology, School of Health Sciences, University of Ioannina, 455 00 Ioannina, Greece; [email protected] * Correspondence: [email protected] (E.T.); [email protected] (C.R.); Tel.: +00306946939414 (E.T.) These authors are equally contributed. y Received: 16 June 2020; Accepted: 14 July 2020; Published: 21 July 2020 Abstract: Oral squamous cell carcinoma (OSCC) is considered an aggressive malignancy, mainly due to its increased propensity to provide local and distant lymph node metastases.