Metastability, Criticality and Phase Transitions in Brain and Its Models
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Metastability of Anatase
Metastability of anatase: size dependent and irreversible anatase-rutile phase SUBJECT AREAS: DENDRIMERS transition in atomic-level precise titania POLYMER CHEMISTRY Norifusa Satoh1, Toshio Nakashima2 & Kimihisa Yamamoto2 NANOSCIENCE AND TECHNOLOGY COORDINATION CHEMISTRY 1Photovoltaic Materials Unit, National Institute for Materials Science, 1-2-1 Sengen, Tsukuba, Ibaraki, 305-0047 Japan, 2Chemical Resources Laboratory, Tokyo Institute of Technology, 4259 Nagatsuta, Yokohama 226-8503 Japan. Received 12 March 2013 Since crystal phase dominantly affects the properties of nanocrystals, phase control is important for the applications. To demonstrate the size dependence in anatase-rutile phase transition of titania, we used Accepted quantum-size titania prepared from the restricted number of titanium ions within dendrimer templates for 21 May 2013 size precision purposes and optical wave guide spectroscopy for the detection. Contrary to some theoretical calculations, the observed irreversibility in the transition indicates the metastablity of anatase; Published thermodynamics cannot explain the formation of metastable states. Therefore, we take into account the 7 June 2013 kinetic control polymerization of TiO6 octahedral units to explain how the crystal phase of the crystal-nucleus-size titania is dependent on which coordination sites, cis-ortrans-, react in the TiO6 octahedra, suggesting possibilities for the synthetic phase control of nanocrystals. In short, the dendrimer Correspondence and templates give access to crystal nucleation chemistry. The paper will also contribute to the creation of artificial metastable nanostructures with atomic-level precision. requests for materials should be addressed to N.S. (SATOH. he size dependence of nanocrystals during a solid-solid phase transition has attracted much attention1,2, [email protected]) because phase control is a key step to improve functionalities in photovoltaics3,4, ferroelectricity5, magnetics6, 7 or K.Y. -
Multiple Interfaces in Diffusional Phase Transitions in Binary Mesogen-Non-Mesogen Mixtures Undergoing Metastable Phase Separations
Multiple interfaces in diffusional phase transitions in binary mesogen-non-mesogen mixtures undergoing metastable phase separations Ezequiel R. Soulé 1,2 , Cyrille Lavigne 2,3 , Linda Reven 3 and Alejandro D. Rey 2* 1. Institute of Materials Science and Technology (INTEMA), University of Mar del Plata and National Research Council (CONICET), J. B. Justo 4302, 7600 Mar del Plata, Argentina 2. Department of Chemical Engineering, McGill University, Montreal, Quebec H3A 2B2, Canada 3. Center for Self-Assembled Chemical Structure (CSACS), Chemistry Department, McGill University, 801 Sherbrooke St. West, Montreal, Quebec H3A 2K6, Canada * corresponding author Abstract Theory and simulations of simultaneous chemical demixing and phase ordering are performed for a mixed order parameter system with an isotropic-isotropic (I-I) phase separation that is metastable with respect to an isotropic-nematic (I-N) phase ordering transition. Under certain conditions, the disordered phase transforms into an ordered phase via the motion of a double front containing a metastable phase produced by I-I demixing, a thermodynamically driven mechanism not previously reported. Different kinetic regimes are found depending on the location of the initial conditions in the thermodynamic phase diagram and the ratio between diffusional and nematic phase ordering mobilities. For a diffusional process, depending if the temperature is above or below the critical co-dissolution point, an inflection point or a phase separation takes place in the depletion layer. This phase separation leads to the formation of a second interface where the separation of the two metastable isotropic phases grows monotonically with time. The observed deviations from the typical Fickian concentration profiles are associated with strong positive deviations of the mixture from ideality due to couplings between concentration and nematic ordering. -
Version 2.2 Structured Psychosocial Stress and Therapeutic Intervention: Toward a Realistic Biological Medicine
Version 2.2 Structured Psychosocial Stress and Therapeutic Intervention: Toward a Realistic Biological Medicine Rodrick Wallace, Ph.D. The New York State Psychiatric Institute ∗ June 5, 2003 Abstract Using generalized ‘language of thought’ arguments appropriate to interacting cognitive modules, we explore how disease states can inter- act with medical treatment, including, but not limited to, drug ther- apy. The feedback between treatment and response creates a kind of idiotypic ‘hall of mirrors’ generating a pattern of ‘efficacy’, ‘treatment failure’, and ‘adverse reactions’ which will, from a Rate Distortion per- spective, embody a distorted image of externally-imposed structured psychosocial stress. This analysis, unlike current pharmacogenetics, does not either reify ‘race’ or blame the victim by using genetic struc- ture to place the locus-of-control within a group or individual. Rather, it suggests that a comparatively simple series of questions to identify longitudinal and cross-sectional stressors may provide more effective guidance for specification of individual medical therapy than compli- cated genotyping strategies of dubious meaning. These latter are likely ∗Address correspondence to R. Wallace, PISCS Inc., 549 W. 123 St., Suite 16F, New York, NY, 10027. Telephone (212) 865-4766, [email protected]. Affiliation is for identification only. This material has been submitted for publication and is protected by copyright. 1 to be both very expensive and utterly blind to the impact of struc- tured psychosocial stress – a euphemism -
Stevan Harnad 10 the Open Research
Stevan Harnad To appear in: In: Jacobs, N., Eds. Open Access: Key Strategic, Technical and Economic Aspects. Chandos. Note, final versions of figures and captions still to come, but their content and positions will be as shown here. The reference list will also be pruned, to cite or remove uncited works The Open Research Web: A Preview of the Optimal and the Inevitable Nigel Shadbolt, Tim Brody, Les Carr, and Stevan Harnad University of Southampton Most of this book has been about the past and the present of Open Access (OA). Let’s now take a brief glimpse at its future, for it is already within reach and almost within sight: Once the optimal and inevitable outcome for the research literature has became actual , namely, all 2.5 million of the annual articles appearing in the planet’s 24,000 peer-reviewed research journals are freely accessible online to all would-be users, then: (1) All their OAI metadata and full-texts will be harvested and reverse-indexed by services such as Google, OAIster (and new OAI/OA services), making it possible to search all and only the research literature in all disciplines using Boolean full-text search (and, or not, etc.). (2) Boolean full-text search will be augmented by Artificial Intelligence (AI) based text-analysis and classification techniques superior to human pre- classification, infinitely less time-consuming, and applied automatically to the entire OA full-text corpus. (3) Articles and portions of articles will also be classified, tagged and annotated in terms of “ontologies” (lists of the kinds of things of interest in a subject domain, their characteristics, and their relations to other things) as provided by authors, users, other authorities, or automatic AI techniques, creating the OA research subset of the “semantic web” (Berners-Lee et al. -
Object Persistence and Availability in Digital Libraries Michael L
Old Dominion University ODU Digital Commons Computer Science Faculty Publications Computer Science 2002 Object Persistence and Availability in Digital Libraries Michael L. Nelson Old Dominion University B. Danette Allen Follow this and additional works at: https://digitalcommons.odu.edu/computerscience_fac_pubs Part of the Computer Sciences Commons, and the Digital Communications and Networking Commons Repository Citation Nelson, Michael L. and Allen, B. Danette, "Object Persistence and Availability in Digital Libraries" (2002). Computer Science Faculty Publications. 2. https://digitalcommons.odu.edu/computerscience_fac_pubs/2 Original Publication Citation Nelson, M.L., & Allen, B.D. (2002). Object persistence and availability in digital libraries. D-Lib Magazine, 8(1), 1-24. doi: 10.1045/ january2002-nelson This Article is brought to you for free and open access by the Computer Science at ODU Digital Commons. It has been accepted for inclusion in Computer Science Faculty Publications by an authorized administrator of ODU Digital Commons. For more information, please contact [email protected]. Object Persistence and Availability in Digital Libraries Search | Back Issues | Author Index | Title Index | Contents D-Lib Magazine January 2002 Volume 8 Number 1 ISSN 1082-9873 Object Persistence and Availability in Digital Libraries Michael L. Nelson, B. Danette Allen NASA Langley Research Center Hampton, VA 23681 {m.l.nelson, b.d.allen}@nasa.gov Abstract We have studied object persistence and availability of 1,000 digital library (DL) objects. Twenty World Wide Web accessible DLs were chosen and from each DL, 50 objects were chosen at random. A script checked the availability of each object three times a week for just over 1 year for a total of 161 data samples. -
Citebase Search: Autonomous Citation Database for E-Print Archives
Citebase Search: Autonomous Citation Database for e-Print Archives Citebase Search: Autonomous Citation Database for e-Print Archives Tim Brody <[email protected]> Intelligence, Agents, Multimedia Group University of Southampton Abstract Citebase is a culmination of the Opcit Project and the Open Archives Initiative. The Opcit Project's aim to citation-link arXiv.org was coupled with the interoperability of the OAI to develop a cross-archive search engine with the ability to harvest, parse, and link research paper bibliographies. These citation links create a classic citation database which is used to generate citation analysis and navigation over the e- print literature. Citebase is now linked from arXiv.org, alongside SLAC/SPIRES, and is integrated with e- Prints.org repositories using Paracite. Introduction Citebase Search is a Web service that harvests research articles from online, e- print archives (both pre- and post- peer-reviewed articles). Citebase parses references from the full-text, citation-linking those references to the cited articles. This is the basis for a classical citation database. Citebase was first announced in December 2001 [1], although it was not until Citebase was integrated in August 2002 with arXiv.org that any sizeable number of users started to use Citebase. As an add-on to arXiv.org, arXiv provides links from its abstract pages to the equivalent abstract page in Citebase. Citebase currently draws most of its traffic from users following these links, without them then going onto use Citebase’s own search service (see Figure 1). In the first section I will introduce the motivation behind Citebase, section 2 gives some of the structure of the system, section 3 introduces the service as seen by the user and section 4 gives an example of some of the data mining that can be performed on Citebase’s database. -
A Case Study of N-Doped (Tio2)N for Photocatalysis
Metastability Triggered Reactivity in Clusters at Realistic Conditions: A Case Study of N-doped (TiO2)n for Photocatalysis Shikha Saini, Pooja Basera, Manish Kumar, Preeti Bhumla, Saswata Bhattacharya∗ Department of Physics, Indian Institute of Technology Delhi, Hauz Khas, New Delhi, 110016, India E-mail: [email protected][SB] Phone: +91-2659 1359. Fax: +91-2658 2037 Abstract Here we report a strategy, by taking a prototypical model system for photocatal- ysis (viz. N-doped (TiO2)n clusters), to accurately determine low energy metastable structures that can play a major role with enhanced catalytic reactivity. Computa- tional design of specific metastable photocatalyst with enhanced activity is never been easy due to plenty of isomers on potential energy surface. This requires fixing vari- ous parameters viz. (i) favorable formation energy, (ii) low fundamental gap, (iii) low excitation energy and (iv) high vertical electron affinity (VEA) and low vertical ion- arXiv:2006.07395v1 [cond-mat.mtrl-sci] 12 Jun 2020 ization potential (VIP). We validate here by integrating several first principles based methodologies that consideration of the global minimum structure alone can severely underestimate the activity. As a first step, we have used a suite of genetic algorithms [viz. searching clusters with conventional minimum total energy ((GA)E); searching EA IP clusters with specific property i.e. high VEA ((GA)P ), and low VIP ((GA)P )] to 1 model the N-doped (TiO2)n clusters. Following this, we have identified its free energy using ab initio thermodynamics to confirm that the metastable structures are not too far from the global minima. -
Language Beyond Our Grasp: What Mirror Neurons Can, and Cannot, Do for Language Evolution
LANGUAGE BEYOND OUR GRASP: WHAT MIRROR NEURONS CAN, AND CANNOT, DO FOR LANGUAGE EVOLUTION James R Hurford, Language Evolution and Computation Research Unit, Linguistics Department, University of Edinburgh (Note: To appear in Kimbrough Oller, D., U. Griebel and K. Plunkett (eds.) (2002) The Evolution of Communication Systems: A Comparative Approach. The Vienna Series in Theoretical Biology, MIT Press, Cambridge MA. [in press]. In case of any discrepancy with the eventually printed version, the printed version will be the `authorized' version.) ... before trying to construct scenarios of language origin and evolution based on MNS we must take care to analyse properly the nature of MNS itself. (Stamenov, 2002) [MNS = mirror neurons or mirror neuron system] And, I would add, we must also take care to analyse properly the nature of language itself. Several recent papers (Rizzolatti and Arbib, 1998; Arbib, 2001; Arbib, 2002) suggest that the discovery of mirror neurons helps us to understand in some more detail how human language evolved. The present paper tries to explore and continue further the development of ideas in these papers(1). Two main issues raised by mirror neurons are addressed, in Sections 1 and 2, respectively. Section 1 aims to correct a possibly widespread misunderstanding of the significance of mirror neurons, as reflected in the following journalistic passages. USC's Michael A. Arbib, Ph.D., says ``the neurons, located in the premotor cortex just in front of the motor cortex, are a mechanism for recognizing the meaning of actions made by others ... For communication to succeed, both the individual sending a message and the individual receiving it must recognize the significance of the sender's signal. -
Version 4 New Mathematical Foundations for AI and Alife: Are the Necessary Conditions for Animal Consciousness Sufficient for the Design of Intelligent Machines?
Version 4 New mathematical foundations for AI and Alife: Are the necessary conditions for animal consciousness sufficient for the design of intelligent machines? Rodrick Wallace, Ph.D. The New York State Psychiatric Institute∗ May 23, 2006 Abstract matter... We may simply not be seeing some fun- damental mathematical description of what is go- Rodney Brooks’ call for ‘new mathematics’ to revitalize the ing on in living systems and so be leaving it out of disciplines of artificial intelligence and artificial life can be our AI and Alife models... there might be some or- answered by adaptation of what Adams has called ‘the in- ganizing principle, some mathematical notion that formational turn in philosophy’, aided by the novel perspec- we need in order to understand how they work... tives that program gives regarding empirical studies of ani- What form might this mathematical notion take? It mal cognition and consciousness. Going backward from the need not be disruptive of our current view of living necessary conditions communication theory imposes on ani- things, but could be as non-threatening as the notion mal cognition and consciousness to sufficient conditions for of computation, just different from anything anyone machine design is, however, an extraordinarily difficult engi- has currently thought of. Perhaps other mathemat- neering task. The most likely use of the first generations of ical principles or notions, necessary to build good conscious machines will be to model the various forms of psy- explanations of the details of evolution, cognition, chopathology, since we have little or no understanding of how consciousness or learning, will be discovered or in- consciousness is stabilized in humans or other animals. -
Open Access Self-Archiving: an Author Study
Open access self-archiving: An author study May 2005 Alma Swan and Sheridan Brown Key Perspectives Limited 48 Old Coach Road, Playing Place, TRURO, Cornwall, TR3 6ET, UK (Registered Office) Tel. +44 (0)1392 879702 www.keyperspectives.co.uk www.keyperspectives.com CONTENTS Executive summary 1. Introduction 1 2. The respondents 7 3. Open access journals 10 4. The use of research information 13 4.1 Ease of access to work-related information 13 4.2 Age of articles most commonly used 13 4.3 Respondents’ publishing activities 17 4.3.1 Number of articles published 17 4.3.2 Respondents’ citation records 20 4.3.3 Publishing objectives 23 4.4 Searching for information 23 4.4.1 Research articles in closed archives 24 4.4.2 Research articles in open archives 24 5. Self-archiving 26 5.1 Self-archiving experience 26 5.1.1 The level of self-archiving activity 26 5.1.2 Length of experience of self-archiving 38 5.2 Awareness of self-archiving as a means to providing open access 43 5.3 Motivation issues 49 5.4 The mechanics of self-archiving 51 5.4.1 Who has actually done the depositing? 51 5.4.2 How difficult is it to self-archive? 51 5.4.3 How long does it take to self-archive? 53 5.4.4 Preservation of archived articles 55 5.4.5 Copyright 56 5.4.6 Digital objects being deposited in open archives 57 5.4.7 Mandating self-archiving? 62 6. Discussion 69 References 74 Appendices: Appendix 1: Reasons for publishing in open access journals, by subject area (table) 77 Appendix 2: Reasons for publishing in open access journals, by subject area (verbatim responses) 79 Appendix 3: Reasons for not publishing in open access journals, by subject area (table) 83 Appendix 4: Reasons for not publishing in open access journals, by subject area (verbatim responses) 86 Appendix 5: Ease of access to research articles needed for work, by subject area 93 Appendix 6: Reasons for publishing research results (verbatim responses) 94 Appendix 7: Use of closed archives: results broken down by subject area 97 Tables 1. -
Metastable–Solid Phase Diagrams Derived from Polymorphic
Metastable–solid phase diagrams derived from polymorphic solidification kinetics Babak Sadigha,1 , Luis Zepeda-Ruiza, and Jonathan L. Belofa,1 aLawrence Livermore National Laboratory, Physical and Life Sciences Directorate, Livermore, CA 94550 Edited by Pablo G. Debenedetti, Princeton University, Princeton, NJ, and approved January 16, 2021 (received for review August 24, 2020) Nonequilibrium processes during solidification can lead to kinetic Through X-ray diffraction of the freely suspended droplets, the stabilization of metastable crystal phases. A general frame- dynamics of crystal nucleation during solidification have been work for predicting the solidification conditions that lead to investigated. As a result, solidification of diverse crystalline metastable-phase growth is developed and applied to a model phases such as fcc, bcc, icosahedral, and quasicrystalline has face-centered cubic (fcc) metal that undergoes phase transitions been observed, and emergence of metastable phases, often in to the body-centered cubic (bcc) as well as the hexagonal close- the bcc structure, in sufficiently undercooled liquids has been packed phases at high temperatures and pressures. Large-scale demonstrated. Through application of CNT, the undercooling molecular dynamics simulations of ultrarapid freezing show that necessary for metastable-phase growth has been rationalized. bcc nucleates and grows well outside of the region of its thermo- It is conjectured that phase selection takes place in the nucle- dynamic stability. An extensive study of crystal–liquid equilibria ation stage; the phase emerging is one with the smallest critical confirms that at any given pressure, there is a multitude of nucleation barrier. Consequently, models for solid–liquid inter- metastable solid phases that can coexist with the liquid phase. -
The Metastability of an Electrochemically Controlled
[28]W. L. Jorgensen, J. Tirado-Rives, J. Am. Chem. Soc. 1988, 110, 1657. guise of bistable [2]rotaxanes in which the ring component can [29]Gaussian 98 (Revision A.11.3), M. J. Frisch, G. W. Trucks, H. B. Schlegel, G. E. be induced[5] to move relative to the dumbbell-shaped one by Scuseria, M. A. Robb, J. R. Cheeseman, V. G. Zakrzewski, J. A. Montgomery, R. E. Stratmann, J. C. Burant, S. Dapprich, J. M. Millam, A. D. Daniels, K. N. altering the redox characteristics of the molecules. Such Kudin, M. C. Strain, O. Farkas, J. Tomasi, V. Barone, M. Cossi, R. Cammi, B. precisely controllable nanoscale molecular machines and Mennucci, C. Pomelli, C. Adamo, S. Clifford, J. Ochterski, G. A. Petersson, switches have attracted a lot of attention[2, 3] because of their P. Y. Ayala, Q. Cui, K. Morokuma, D. K. Malick, A. D. Rabuck, K. Raghava- potential to meet the expectations of a visionary[6] and to act as chari, J. B. Foresman, J. Cioslowski, J. V. Ortiz, B. B. Stefanov, G. Liu, A. Liashenko, P. Piskorz, I. Komaromi, R. Gomperts, R. L. Martin, D. J. Fox, T. some of the smallest components for the engineering of Keith, M. A. Al-Laham, C. Y. Peng, A. Nanayakkara, C. Gonzalez, M. nanoelectromechanical systems (NEMs) and the fabrication of Challacombe, P. M. W. Gill, B. G. Johnson, W. Chen, M. W. Wong, J. L. nanoelectronic devices.[7] Andres, M. Head-Gordon, E. S. Replogle, J. A. Pople, Gaussian, Inc., Although the redox-switching properties of numerous bista- Pittsburgh, PA, 2002.