Pteridophyte Fungal Associations: Current Knowledge and Future Perspectives
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Seed Plant Models
Review Tansley insight Why we need more non-seed plant models Author for correspondence: Stefan A. Rensing1,2 Stefan A. Rensing 1 2 Tel: +49 6421 28 21940 Faculty of Biology, University of Marburg, Karl-von-Frisch-Str. 8, 35043 Marburg, Germany; BIOSS Biological Signalling Studies, Email: stefan.rensing@biologie. University of Freiburg, Sch€anzlestraße 18, 79104 Freiburg, Germany uni-marburg.de Received: 30 October 2016 Accepted: 18 December 2016 Contents Summary 1 V. What do we need? 4 I. Introduction 1 VI. Conclusions 5 II. Evo-devo: inference of how plants evolved 2 Acknowledgements 5 III. We need more diversity 2 References 5 IV. Genomes are necessary, but not sufficient 3 Summary New Phytologist (2017) Out of a hundred sequenced and published land plant genomes, four are not of flowering plants. doi: 10.1111/nph.14464 This severely skewed taxonomic sampling hinders our comprehension of land plant evolution at large. Moreover, most genetically accessible model species are flowering plants as well. If we are Key words: Charophyta, evolution, fern, to gain a deeper understanding of how plants evolved and still evolve, and which of their hornwort, liverwort, moss, Streptophyta. developmental patterns are ancestral or derived, we need to study a more diverse set of plants. Here, I thus argue that we need to sequence genomes of so far neglected lineages, and that we need to develop more non-seed plant model species. revealed much, the exact branching order and evolution of the I. Introduction nonbilaterian lineages is still disputed (Lanna, 2015). Research on animals has for a long time relied on a number of The first (small) plant genome to be sequenced was of THE traditional model organisms, such as mouse, fruit fly, zebrafish or model plant, the weed Arabidopsis thaliana (c. -
General Botany Lab Review Fungi, Algae, Bryophytes, Ferns & Fern Allies
General Botany Lab Review Fungi, Algae, Bryophytes, Ferns & Fern Allies You have looked at a lot of stuff – both live and via prepared slides. You’ve also labeled at least one Life Cycle Diagram for each of the groups. Know what your benchmarks are for a general life cycle diagram and be able to label them. I will not ask you to identify anything to species or genus; be able to identify things to “group” (i.e., ascomycete, bryophyta, etc.) Be able to identify growth form (e.g., unicell, filamentous, etc.). Recognize the differences between sexual and asexual reroductive structures. All questions will be multiple choice. Material looked at: UNIT 1: FUNGI EXERCISE 1: CHYTRIDS/ CHYTRIDOMYCOTA: Allmyces arbusculus – life and prepared slides EXERCISE 2: ZYGOMYCETES/ ZYGOMYCOTA: Rhizopus stolonifer – live and prepared slides EXERCISE 2: MYCORRHIZA and the GLOMEROMYCETES/ GLOMEROMYCOTA – prepared slides only EXERCISE 3: ASCOMYCETES/ ASCOMYCOTA Aspergillus sp., Penicillium sp., Saccharomyces cerevisiae, Peziza sp., Sordaria fimicola, and Morchella sp. – a mixture of live and prepared materials EXERCISE 4: BASIDIOMYCETES/BASIDIOMYCETES Agaricus, Coprinus, Cronartium (a rust), Ustilago (a smut) – slides, fresh, and dried EXERCISE 5: SLIME MOLDS – live and prepared Physarum EXERCISE 6: LICHENS – live and prepared slides be able to identify the various growth forms UNIT 2: ALGAE EXERCISE 1: CYANOBACTERIA Anabaena sp., Nostoc, and Oscillaroria – live and prepared material EXERCISE 2: SUPERGROUP EXCAVATA (Phylum Euglenophyta) – live and prepared material -
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African countries and neighbouring islands covered by the Synopsis. S T R E L I T Z I A 23 Synopsis of the Lycopodiophyta and Pteridophyta of Africa, Madagascar and neighbouring islands by J.P. Roux Pretoria 2009 S T R E L I T Z I A This series has replaced Memoirs of the Botanical Survey of South Africa and Annals of the Kirstenbosch Botanic Gardens which SANBI inherited from its predecessor organisations. The plant genus Strelitzia occurs naturally in the eastern parts of southern Africa. It comprises three arborescent species, known as wild bananas, and two acaulescent species, known as crane flowers or bird-of-paradise flowers. The logo of the South African National Biodiversity Institute is based on the striking inflorescence of Strelitzia reginae, a native of the Eastern Cape and KwaZulu-Natal that has become a garden favourite worldwide. It sym- bolises the commitment of the Institute to champion the exploration, conservation, sustain- able use, appreciation and enjoyment of South Africa’s exceptionally rich biodiversity for all people. J.P. Roux South African National Biodiversity Institute, Compton Herbarium, Cape Town SCIENTIFIC EDITOR: Gerrit Germishuizen TECHNICAL EDITOR: Emsie du Plessis DESIGN & LAYOUT: Elizma Fouché COVER DESIGN: Elizma Fouché, incorporating Blechnum palmiforme on Gough Island PHOTOGRAPHS J.P. Roux Citing this publication ROUX, J.P. 2009. Synopsis of the Lycopodiophyta and Pteridophyta of Africa, Madagascar and neighbouring islands. Strelitzia 23. South African National Biodiversity Institute, Pretoria. ISBN: 978-1-919976-48-8 © Published by: South African National Biodiversity Institute. Obtainable from: SANBI Bookshop, Private Bag X101, Pretoria, 0001 South Africa. -
XI MOBILE NO:9340839715 CHAPTER-3 Plant Kingd
NAME OF THE TEACHER: SR. RENCY GEORGE SUBJECT: BIOLOGY TOPIC: CHAPTER -1 CLASS: XI MOBILE NO:9340839715 CHAPTER-3 Plant Kingdom Objectives :- Observe plants closely to notice features and characteristics of growth and development. Observe and identify differences in plants and animals. Observe similarities among plants (seeds, roots, stems, leaves, flowers, fruit) Learning Strategies:- • Explain Different systems of Classification. • Differentiate between Artificial and Natural System of Classification. • Explain Algae and its significance. • Differentiate between various classes of Algae. • Explain various modes of reproduction in Algae. RESOURCES: i.Text books ii.Learning Materials iii.Lab manual iv.E-Resources,video ,L.C.D etc… CLICK HERE TO PLAY CONTENT RELATED VIDEO ON YOU TUBE. https://youtu.be/SWlVX1gDd98 https://youtu.be/P_MyyxIQzm4 https://youtu.be/KmbFGIiwP4k https://youtu.be/mepU8gStVpg https://youtu.be/fnE01M0YlTc https://youtu.be/xir7xvLi8XE Contents Introduction Plant kingdom includes algae, bryophytes, pteridophytes, gymnosperms and angiosperms. ... Depending on the type of pigment possessed and the type of stored food, algae are classified into three classes, namely Chlorophyceae, Phaeophyceae and Rhodophyceae. Eukaryotic, multicellular, chlorophyll containing and having cell wall, are grouped under the kingdom Plantae. It is popularly known as plant kingdom. • Phylogenetic system of classification based on evolutionary relationship is presently used for classifying plants. • Numerical Taxonomy use computer by assigning code for each character and analyzing the features. • Cytotaxonomy is based on cytological information like chromosome number, structure and behaviour. • Chemotaxonomy uses chemical constituents of plants to resolve the confusion. Algae: These include the simplest plants which possess undifferentiated or thallus like forms, reproductive organs single celled called gametangia. -
The Associations Between Pteridophytes and Arthropods
FERN GAZ. 12(1) 1979 29 THE ASSOCIATIONS BETWEEN PTERIDOPHYTES AND ARTHROPODS URI GERSON The Hebrew University of Jerusalem, Faculty of Agriculture, Rehovot, Israel. ABSTRACT Insects belonging to 12 orders, as well as mites, millipedes, woodlice and tardigrades have been collected from Pterldophyta. Primitive and modern, as well as general and specialist arthropods feed on pteridophytes. Insects and mites may cause slight to severe damage, all plant parts being susceptible. Several arthropods are pests of commercial Pteridophyta, their control being difficult due to the plants' sensitivity to pesticides. Efforts are currently underway to employ insects for the biological control of bracken and water ferns. Although Pteridophyta are believed to be relatively resistant to arthropods, the evidence is inconclusive; pteridophyte phytoecdysones do not appear to inhibit insect feeders. Other secondary compounds of preridophytes, like prunasine, may have a more important role in protecting bracken from herbivores. Several chemicals capable of adversely affecting insects have been extracted from Pteridophyta. The litter of pteridophytes provides a humid habitat for various parasitic arthropods, like the sheep tick. Ants often abound on pteridophytes (especially in the tropics) and may help in protecting these plants while nesting therein. These and other associations are discussed . lt is tenatively suggested that there might be a difference in the spectrum of arthropods attacking ancient as compared to modern Pteridophyta. The Osmundales, which, in contrast to other ancient pteridophytes, contain large amounts of ·phytoecdysones, are more similar to modern Pteridophyta in regard to their arthropod associates. The need for further comparative studies is advocated, with special emphasis on the tropics. -
Introduction to Botany. Lecture 31
Questions and answers Kingdom Vegetabilia: plants Introduction to Botany. Lecture 31 Alexey Shipunov Minot State University November 16, 2011 Shipunov BIOL 154.31 Questions and answers Kingdom Vegetabilia: plants Outline 1 Questions and answers 2 Kingdom Vegetabilia: plants Bryophyta: mosses Shipunov BIOL 154.31 Questions and answers Kingdom Vegetabilia: plants Outline 1 Questions and answers 2 Kingdom Vegetabilia: plants Bryophyta: mosses Shipunov BIOL 154.31 2 Questions and answers Kingdom Vegetabilia: plants Previous final question: the answer 1 Arabidopsis thaliana (L.) Heynh 2 Citrus 3 Piperaceae Where is a genus name? Shipunov BIOL 154.31 Questions and answers Kingdom Vegetabilia: plants Previous final question: the answer 1 Arabidopsis thaliana (L.) Heynh 2 Citrus 3 Piperaceae Where is a genus name? 2 Shipunov BIOL 154.31 Questions and answers Kingdom Vegetabilia: plants Results of Exam 3 (statistical summary) Summary: Min. 1st Qu. Median Mean 3rd Qu. Max. NA’s 43.00 67.00 79.00 78.36 92.00 108.00 5.00 Grades: F D C B max 61 72 82 92 102 Shipunov BIOL 154.31 Questions and answers Kingdom Vegetabilia: plants Results of Exam 3 (the curve) Density estimation for Exam 3 (Biol 154) 61 92 (F) (B) Points Shipunov BIOL 154.31 Questions and answers Bryophyta: mosses Kingdom Vegetabilia: plants Kingdom Vegetabilia: plants Bryophyta: mosses Shipunov BIOL 154.31 Questions and answers Bryophyta: mosses Kingdom Vegetabilia: plants Three main phyla Bryophyta: gametophyte predominance Pteridophyta: sporophyte predominance, no seed Spermatophyta: -
Insights on Reticulate Evolution in Ferns, with Special Emphasis on the Genus Ceratopteris
Utah State University DigitalCommons@USU All Graduate Theses and Dissertations Graduate Studies 8-2021 Insights on Reticulate Evolution in Ferns, with Special Emphasis on the Genus Ceratopteris Sylvia P. Kinosian Utah State University Follow this and additional works at: https://digitalcommons.usu.edu/etd Part of the Ecology and Evolutionary Biology Commons Recommended Citation Kinosian, Sylvia P., "Insights on Reticulate Evolution in Ferns, with Special Emphasis on the Genus Ceratopteris" (2021). All Graduate Theses and Dissertations. 8159. https://digitalcommons.usu.edu/etd/8159 This Dissertation is brought to you for free and open access by the Graduate Studies at DigitalCommons@USU. It has been accepted for inclusion in All Graduate Theses and Dissertations by an authorized administrator of DigitalCommons@USU. For more information, please contact [email protected]. INSIGHTS ON RETICULATE EVOLUTION IN FERNS, WITH SPECIAL EMPHASIS ON THE GENUS CERATOPTERIS by Sylvia P. Kinosian A dissertation submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in Ecology Approved: Zachariah Gompert, Ph.D. Paul G. Wolf, Ph.D. Major Professor Committee Member William D. Pearse, Ph.D. Karen Mock, Ph.D Committee Member Committee Member Karen Kaphiem, Ph.D Michael Sundue, Ph.D. Committee Member Committee Member D. Richard Cutler, Ph.D. Interim Vice Provost of Graduate Studies UTAH STATE UNIVERSITY Logan, Utah 2021 ii Copyright © Sylvia P. Kinosian 2021 All Rights Reserved iii ABSTRACT Insights on reticulate evolution in ferns, with special emphasis on the genus Ceratopteris by Sylvia P. Kinosian, Doctor of Philosophy Utah State University, 2021 Major Professor: Zachariah Gompert, Ph.D. -
Morphological and Anatomical Adaptations to Dry, Shady Environments in Adiantum Reniforme Var
Morphological and anatomical adaptations to dry, shady environments in Adiantum reniforme var. sinense (Pteridaceae) Di Wu1, Linbao Li1, Xiaobo Ma1, Guiyun Huang1 and Chaodong Yang2 1 Rare Plants Research Institute of Yangtze River, Three Gorges Corporation, Yichang, China 2 Engineering Research Center of Ecology and Agriculture Use of Wetland, Ministry of Education, Yangtze University, Jingzhou, China ABSTRACT The natural distribution of the rare perennial fern Adiantum reniforme var. sinense (Pteridaceae), which is endemic to shady cliff environments, is limited to small areas of Wanzhou County, Chongqing, China. In this study, we used brightfield and epifluorescence microscopy to investigate the anatomical structures and histochemical features that may allow this species to thrive in shady, dry cliff environments. The A. reniforme var. sinense sporophyte had a primary structure and a dictyostele. The plants of this species had an endodermis, sclerenchyma layers and hypodermal sterome, reflecting an adaption to dry cliff environments. Blades had a thin cuticle and isolateral mesophyll, suggesting a tolerance of shady environments. These characteristics are similar to many sciophyte ferns such as Lygodium japonicum and Pteris multifida. Thus, the morphological and anatomical characteristics of A. reniforme var. sinense identified in this study are consistent with adaptations to shady, dry cliff environments. Subjects Conservation Biology, Plant Science Keywords Endodermis, Dictyostele, Sclerenchyma layer, Suberin lamellae, Thin cuticle Submitted 14 April 2020 Accepted 24 August 2020 INTRODUCTION Published 30 September 2020 Adiantum reniforme var. sinense (Pteridaceae, subfamily Vittarioideae) is a rare Corresponding authors Guiyun Huang, cliff-dwelling perennial pteridophyte, with a natural distribution limited to small areas of [email protected] Wanzhou County, Chongqing, China. -
Ferns, Cycads, Conifers and Vascular Plants
Flora of Australia Glossary — Ferns, Cycads, Conifers and Vascular plants A main glossary for the Flora of Australia was published in Volume 1 of both printed editions (1981 and 1999). Other volumes contain supplementary glossaries, with specific terms needed for particular families. This electronic glossary is a synthesis of all hard-copy Flora of Australia glossaries and supplementary glossaries published to date. The first Flora of Australia glossary was compiled by Alison McCusker. Mary D. Tindale compiled most of the fern definitions, and the conifer definitions were provided by Ken D. Hill. Russell L. Barrett combined all of these to create the glossary presented here, incorporating additional terms from the printed version of Volume 37. This electronic glossary contains terms used in all volumes, but with particular reference to the flowering plants (Volumes 2–50). This glossary will be updated as future volumes are published. It is the standard to be used by authors compiling future taxon treatments for the Flora of Australia. It also comprises the terms used in Species Plantarum — Flora of the World. Alternative terms For some preferred terms (in bold), alternative terms are also highlighted (in parentheses). For example, apiculum is the preferred term, and (=apiculus) is an alternative. Preferred terms are those also used in Species Plantarum — Flora of the World. © Copyright Commonwealth of Australia, 2017. Flora of Australia Glossary — Ferns, Cycads, Conifers and Vascular plants is licensed by the Commonwealth of Australia for use under a Creative Commons Attribution 4.0 International licence with the exception of the Coat of Arms of the Commonwealth of Australia, the logo of the agency responsible for publishing the report, content supplied by third parties, and any images depicting people. -
Chapter 23: the Early Tracheophytes
Chapter 23 The Early Tracheophytes THE LYCOPHYTES Lycopodium Has a Homosporous Life Cycle Selaginella Has a Heterosporous Life Cycle Heterospory Allows for Greater Parental Investment Isoetes May Be the Only Living Member of the Lepidodendrid Group THE MONILOPHYTES Whisk Ferns Ophioglossalean Ferns Horsetails Marattialean Ferns True Ferns True Fern Sporophytes Typically Have Underground Stems Sexual Reproduction Usually Is Homosporous Fern Have a Variety of Alternative Means of Reproduction Ferns Have Ecological and Economic Importance SUMMARY PLANTS, PEOPLE, AND THE ENVIRONMENT: Sporophyte Prominence and Survival on Land PLANTS, PEOPLE, AND THE ENVIRONMENT: Coal, Smog, and Forest Decline THE OCCUPATION OF THE LAND PLANTS, PEOPLE, AND THE The First Tracheophytes Were ENVIRONMENT: Diversity Among the Ferns Rhyniophytes Tracheophytes Became Increasingly Better PLANTS, PEOPLE, AND THE Adapted to the Terrestrial Environment ENVIRONMENT: Fern Spores Relationships among Early Tracheophytes 1 KEY CONCEPTS 1. Tracheophytes, also called vascular plants, possess lignified water-conducting tissue (xylem). Approximately 14,000 species of tracheophytes reproduce by releasing spores and do not make seeds. These are sometimes called seedless vascular plants. Tracheophytes differ from bryophytes in possessing branched sporophytes that are dominant in the life cycle. These sporophytes are more tolerant of life on dry land than those of bryophytes because water movement is controlled by strongly lignified vascular tissue, stomata, and an extensive cuticle. The gametophytes, however still require a seasonally wet habitat, and water outside the plant is essential for the movement of sperm from antheridia to archegonia. 2. The rhyniophytes were the first tracheophytes. They consisted of dichotomously branching axes, lacking roots and leaves. They are all extinct. -
S41467-021-25308-W.Pdf
ARTICLE https://doi.org/10.1038/s41467-021-25308-w OPEN Phylogenomics of a new fungal phylum reveals multiple waves of reductive evolution across Holomycota ✉ ✉ Luis Javier Galindo 1 , Purificación López-García 1, Guifré Torruella1, Sergey Karpov2,3 & David Moreira 1 Compared to multicellular fungi and unicellular yeasts, unicellular fungi with free-living fla- gellated stages (zoospores) remain poorly known and their phylogenetic position is often 1234567890():,; unresolved. Recently, rRNA gene phylogenetic analyses of two atypical parasitic fungi with amoeboid zoospores and long kinetosomes, the sanchytrids Amoeboradix gromovi and San- chytrium tribonematis, showed that they formed a monophyletic group without close affinity with known fungal clades. Here, we sequence single-cell genomes for both species to assess their phylogenetic position and evolution. Phylogenomic analyses using different protein datasets and a comprehensive taxon sampling result in an almost fully-resolved fungal tree, with Chytridiomycota as sister to all other fungi, and sanchytrids forming a well-supported, fast-evolving clade sister to Blastocladiomycota. Comparative genomic analyses across fungi and their allies (Holomycota) reveal an atypically reduced metabolic repertoire for sanchy- trids. We infer three main independent flagellum losses from the distribution of over 60 flagellum-specific proteins across Holomycota. Based on sanchytrids’ phylogenetic position and unique traits, we propose the designation of a novel phylum, Sanchytriomycota. In addition, our results indicate that most of the hyphal morphogenesis gene repertoire of multicellular fungi had already evolved in early holomycotan lineages. 1 Ecologie Systématique Evolution, CNRS, Université Paris-Saclay, AgroParisTech, Orsay, France. 2 Zoological Institute, Russian Academy of Sciences, St. ✉ Petersburg, Russia. 3 St. -
Taxonomic, Phylogenetic, and Functional Diversity of Ferns at Three Differently Disturbed Sites in Longnan County, China
diversity Article Taxonomic, Phylogenetic, and Functional Diversity of Ferns at Three Differently Disturbed Sites in Longnan County, China Xiaohua Dai 1,2,* , Chunfa Chen 1, Zhongyang Li 1 and Xuexiong Wang 1 1 Leafminer Group, School of Life Sciences, Gannan Normal University, Ganzhou 341000, China; [email protected] (C.C.); [email protected] (Z.L.); [email protected] (X.W.) 2 National Navel-Orange Engineering Research Center, Ganzhou 341000, China * Correspondence: [email protected] or [email protected]; Tel.: +86-137-6398-8183 Received: 16 March 2020; Accepted: 30 March 2020; Published: 1 April 2020 Abstract: Human disturbances are greatly threatening to the biodiversity of vascular plants. Compared to seed plants, the diversity patterns of ferns have been poorly studied along disturbance gradients, including aspects of their taxonomic, phylogenetic, and functional diversity. Longnan County, a biodiversity hotspot in the subtropical zone in South China, was selected to obtain a more thorough picture of the fern–disturbance relationship, in particular, the taxonomic, phylogenetic, and functional diversity of ferns at different levels of disturbance. In 90 sample plots of 5 5 m2 along roadsides × at three sites, we recorded a total of 20 families, 50 genera, and 99 species of ferns, as well as 9759 individual ferns. The sample coverage curve indicated that the sampling effort was sufficient for biodiversity analysis. In general, the taxonomic, phylogenetic, and functional diversity measured by Hill numbers of order q = 0–3 indicated that the fern diversity in Longnan County was largely influenced by the level of human disturbance, which supports the ‘increasing disturbance hypothesis’.