Quantification of Fish Habitat in Selected Reaches of the Marmaton and Marais Des Cygnes Rivers, Missouri

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Quantification of Fish Habitat in Selected Reaches of the Marmaton and Marais Des Cygnes Rivers, Missouri Prepared in cooperation with the Missouri Department of Conservation Quantification of Fish Habitat in Selected Reaches of the Marmaton and Marais des Cygnes Rivers, Missouri Flathead catfish habitat Velocity Depth Substrate Scientific Investigations Report 2005–5180 U.S. Department of the Interior U.S. Geological Survey Quantification of Fish Habitat in Selected Reaches of the Marmaton and Marais des Cygnes Rivers, Missouri By David C. Heimanna, Joseph M. Richardsb, Shannon K. Brewerc, and Richard D. Normana aU.S. Geological Survey, Missouri Water Science Center, Lee’s Summit, Missouri bU.S. Geological Survey, Missouri Water Science Center, Rolla, Missouri cUniversity of Missouri, School of Natural Resources, Columbia, Missouri Prepared in cooperation with the Missouri Department of Conservation Scientific Investigations Report 2005–5180 U.S. Department of the Interior U.S. Geological Survey U.S. Department of the Interior Gale A. Norton, Secretary U.S. Geological Survey P. Patrick Leahy, Acting Director U.S. Geological Survey, Reston, Virginia: 2005 For sale by U.S. Geological Survey, Information Services Box 25286, Denver Federal Center Denver, CO 80225 For more information about the USGS and its products: Telephone: 1-888-ASK-USGS World Wide Web: http://www.usgs.gov/ Any use of trade, product, or firm names in this publication is for descriptive purposes only and does not imply endorsement by the U.S. Government. Although this report is in the public domain, permission must be secured from the individual copyright owners to reproduce any copyrighted materials contained within this report. Suggested citation: Heimann, D.C., Richards, J.M., Brewer, S.K., and Norman, R.D., 2005, Quantification of Fish Habitat in Selected Reaches of the Marmaton and Marais des Cygnes Rivers, Missouri: U.S. Geological Survey Scientific Investigations Report 2005– 5180, 58 p., appendixes, film, illustrations, and tables on CD. iii CONTENTS Abstract. 1 Introduction . 2 Objective. 4 Description of Study Area . 4 Purpose and Scope . 5 Acknowledgments. 5 Methods . 5 Numerical Simulation of Hydraulic Characteristics . 5 Finite-Element Mesh. 5 Topography. 6 Hydrology . 6 Model Calibration, Validation, and Sensitivity. 7 Sources of Error. 7 Substrate Mapping . 11 Fish Habitat Categories. 11 Fish Habitat Characteristics . 15 Quantification of Fish Habitat . 15 Simulated Hydraulic Characteristics. 15 Substrate . 15 Fish Habitat Characteristics . 16 Habitat Availability. 16 Spatial and Temporal Distribution of Habitat. 40 Spatial Distribution and Persistence. 40 Temporal Distribution . 40 Implications for Fishery-Community Management. 41 Summary and Conclusions . 56 References. 57 Appendixes 1–5. Spatial distribution of fish habitat area by category and streamflow for: 1. Marmaton River site M1. .CD 2. Marmaton River site M2. .CD 3. Marais des Cygnes River site MDC1. .CD 4. Marais des Cygnes River site MDC2. .CD 5. Marais des Cygnes River site MDC3. .CD iv Figures 1. Map showing location of study sites. .3 2–6. Photographs showing the: 2. Marmaton River site M1, September 2004 . .CD 3. Marmaton River site M2, September 2003 . .CD 4. Marais des Cygnes River site MDC1, July 2003. .CD 5. Marais des Cygnes River site MDC2, July 2002. .CD 6. Marais des Cygnes River site MDC3, July 2002. .CD 7. Finite-element mesh, bed roughness, measured topographic data points, and bed elevation at the Marmaton River site M1. .CD 8. Finite-element mesh, bed roughness, and bed elevation at the Marmaton River site M2. .CD 9. Finite-element mesh, bed roughness, measured topographic data points, and bed elevation at the Marais des Cygnes River site MDC1. .CD 10. Finite-element mesh, bed roughness, and bed elevation at the Marais des Cygnes River site MDC2 . .CD 11. Finite-element mesh, bed roughness, and bed elevation at the Marais des Cygnes River site MDC3 . .CD 12–13. Graphs showing sensitivity of simulated velocity, depth, and water-surface elevations to changes in: 12. Bed roughness height at flows of 2.01 and 48.7 cubic meters per second at the Marmaton River site M2 . ..
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