Genome Evolution in Bacillus Stick Insects
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Insecta: Phasmatodea) and Their Phylogeny
insects Article Three Complete Mitochondrial Genomes of Orestes guangxiensis, Peruphasma schultei, and Phryganistria guangxiensis (Insecta: Phasmatodea) and Their Phylogeny Ke-Ke Xu 1, Qing-Ping Chen 1, Sam Pedro Galilee Ayivi 1 , Jia-Yin Guan 1, Kenneth B. Storey 2, Dan-Na Yu 1,3 and Jia-Yong Zhang 1,3,* 1 College of Chemistry and Life Science, Zhejiang Normal University, Jinhua 321004, China; [email protected] (K.-K.X.); [email protected] (Q.-P.C.); [email protected] (S.P.G.A.); [email protected] (J.-Y.G.); [email protected] (D.-N.Y.) 2 Department of Biology, Carleton University, Ottawa, ON K1S 5B6, Canada; [email protected] 3 Key Lab of Wildlife Biotechnology, Conservation and Utilization of Zhejiang Province, Zhejiang Normal University, Jinhua 321004, China * Correspondence: [email protected] or [email protected] Simple Summary: Twenty-seven complete mitochondrial genomes of Phasmatodea have been published in the NCBI. To shed light on the intra-ordinal and inter-ordinal relationships among Phas- matodea, more mitochondrial genomes of stick insects are used to explore mitogenome structures and clarify the disputes regarding the phylogenetic relationships among Phasmatodea. We sequence and annotate the first acquired complete mitochondrial genome from the family Pseudophasmati- dae (Peruphasma schultei), the first reported mitochondrial genome from the genus Phryganistria Citation: Xu, K.-K.; Chen, Q.-P.; Ayivi, of Phasmatidae (P. guangxiensis), and the complete mitochondrial genome of Orestes guangxiensis S.P.G.; Guan, J.-Y.; Storey, K.B.; Yu, belonging to the family Heteropterygidae. We analyze the gene composition and the structure D.-N.; Zhang, J.-Y. -
Phasmida (Stick and Leaf Insects)
● Phasmida (Stick and leaf insects) Class Insecta Order Phasmida Number of families 8 Photo: A leaf insect (Phyllium bioculatum) in Japan. (Photo by ©Ron Austing/Photo Researchers, Inc. Reproduced by permission.) Evolution and systematics Anareolatae. The Timematodea has only one family, the The oldest fossil specimens of Phasmida date to the Tri- Timematidae (1 genus, 21 species). These small stick insects assic period—as long ago as 225 million years. Relatively few are not typical phasmids, having the ability to jump, unlike fossil species have been found, and they include doubtful almost all other species in the order. It is questionable whether records. Occasionally a puzzle to entomologists, the Phasmida they are indeed phasmids, and phylogenetic research is not (whose name derives from a Greek word meaning “appari- conclusive. Studies relating to phylogeny are scarce and lim- tion”) comprise stick and leaf insects, generally accepted as ited in scope. The eggs of each phasmid are distinctive and orthopteroid insects. Other alternatives have been proposed, are important in classification of these insects. however. There are about 3,000 species of phasmids, although in this understudied order this number probably includes about 30% as yet unidentified synonyms (repeated descrip- Physical characteristics tions). Numerous species still await formal description. Stick insects range in length from Timema cristinae at 0.46 in (11.6 mm) to Phobaeticus kirbyi at 12.9 in (328 mm), or 21.5 Extant species usually are divided into eight families, in (546 mm) with legs outstretched. Numerous phasmid “gi- though some researchers cite just two, based on a reluctance ants” easily rank as the world’s longest insects. -
About the Book the Format Acknowledgments
About the Book For more than ten years I have been working on a book on bryophyte ecology and was joined by Heinjo During, who has been very helpful in critiquing multiple versions of the chapters. But as the book progressed, the field of bryophyte ecology progressed faster. No chapter ever seemed to stay finished, hence the decision to publish online. Furthermore, rather than being a textbook, it is evolving into an encyclopedia that would be at least three volumes. Having reached the age when I could retire whenever I wanted to, I no longer needed be so concerned with the publish or perish paradigm. In keeping with the sharing nature of bryologists, and the need to educate the non-bryologists about the nature and role of bryophytes in the ecosystem, it seemed my personal goals could best be accomplished by publishing online. This has several advantages for me. I can choose the format I want, I can include lots of color images, and I can post chapters or parts of chapters as I complete them and update later if I find it important. Throughout the book I have posed questions. I have even attempt to offer hypotheses for many of these. It is my hope that these questions and hypotheses will inspire students of all ages to attempt to answer these. Some are simple and could even be done by elementary school children. Others are suitable for undergraduate projects. And some will take lifelong work or a large team of researchers around the world. Have fun with them! The Format The decision to publish Bryophyte Ecology as an ebook occurred after I had a publisher, and I am sure I have not thought of all the complexities of publishing as I complete things, rather than in the order of the planned organization. -
Biodiversita' Ed Evoluzione
Alma Mater Studiorum – Università di Bologna DOTTORATO DI RICERCA IN BIODIVERSITA' ED EVOLUZIONE Ciclo XXVIII Settore Concorsuale di afferenza: 05/B1 – Zoologia ed Antropologia Settore Scientifico disciplinare: BIO/05 – Zoologia TRANSPOSABLE ELEMENTS IN ARTHROPODS GENOMES WITH NON-CANONICAL REPRODUCTIVE STRATEGIES. Presentata da: Dot.ssa Claudia Scavariello Coordinatore Dottorato Relatore Prof.ssa Barbara Mantovani Prof.ssa Barbara Mantovani Correlatore Dott. Andrea Luchetti Esame finale anno 2016 INDEX 1. INTRODUCTION-------------------------------------------------------------------------------------------------------------------------------------1 1.1. History of transposable elements--------------------------------------------------------------------------------1 1.1.1 TEs Classification---------------------------------------------------------------------------------------------------3 1.2. R2 non-LTR retrotransposon----------------------------------------------------------------------------------------------6 1.2.1. R2 history and structure--------------------------------------------------------------------------------------6 1.2.2. R2 retrotranscription mechanism and ribozyme structure--------------10 1.3. TEs survival and the host genome--------------------------------------------------------------------------------12 1.3.1. The impact of TEs on eukaryotic genomes---------------------------------------------12 1.3.2. TEs transposition rate dynamics and host reproductive strategies------------------------------------------------------------------------------------------------------------------14 -
Derived Insect Control Proteins
CONSENSUS DOCUMENT ON SAFETY INFORMATION ON TRANSGENIC PLANTS EXPRESSING BACILLUS THURINGIENSIS - DERIVED INSECT CONTROL PROTEINS U.S. Environmental Protection Agency Unclassified ENV/JM/MONO(2007)14 Organisation de Coopération et de Développement Economiques Organisation for Economic Co-operation and Development 19-Jul-2007 ___________________________________________________________________________________________ English - Or. English ENVIRONMENT DIRECTORATE JOINT MEETING OF THE CHEMICALS COMMITTEE AND Un ENV/JM/MONO(2007) THE WORKING PARTY ON CHEMICALS, PESTICIDES AND BIOTECHNOLOGY cl assi fi ed 14 CONSENSUS DOCUMENT ON SAFETY INFORMATION ON TRANSGENIC PLANTS EXPRESSING BACILLUS THURINGIENSIS - DERIVED INSECT CONTROL PROTEINS Eng lis h - O JT03230400 r . Eng lish Document complet disponible sur OLIS dans son format d'origine Complete document available on OLIS in its original format ENV/JM/MONO(2007)14 Also published in the Series on Harmonisation of Regulatory Oversight in Biotechnology: No. 1, Commercialisation of Agricultural Products Derived through Modern Biotechnology: Survey Results (1995) No. 2, Analysis of Information Elements Used in the Assessment of Certain Products of Modern Biotechnology (1995) No. 3, Report of the OECD Workshop on the Commercialisation of Agricultural Products Derived through Modern Biotechnology (1995) No. 4, Industrial Products of Modern Biotechnology Intended for Release to the Environment: The Proceedings of the Fribourg Workshop (1996) No. 5, Consensus Document on General Information concerning the Biosafety of Crop Plants Made Virus Resistant through Coat Protein Gene-Mediated Protection (1996) No. 6, Consensus Document on Information Used in the Assessment of Environmental Applications Involving Pseudomonas (1997) No. 7, Consensus Document on the Biology of Brassica napus L. (Oilseed Rape) (1997) No. 8, Consensus Document on the Biology of Solanum tuberosum subsp. -
Appendage Loss and Regeneration in Arthropods: a Comparative View
Appendage loss and regeneration in arthropods: A comparative view DIEGO MARUZZO, LUCIO BONATO, CARLO BRENA, GIUSEPPE FUSCO & ALESSANDRO MINELLI Department of Biology, University of Padova, Padova, Italy ABSTRACT Evidence for loss and regeneration of arthropod appendages is reviewed and discussed in terms of comparative developmental biology and arthropod phylogeny. The presence of a preferential breakage point is well documented for some, but not all, lineages within each of the four major groups - chelicerates, myriapods, crustaceans and hexapods. Undisputed evidence of true autotomy, however, is limited to isopods, decapods and some basal ptery- gotes, and claimed for other groups. Regeneration of lost appendages is widespread within arthropods, even if not present or documented in some groups. During regeneration, growth and differentiation of epidermis, nerves, muscles and tracheae are to some extent mutually independent, thus sometimes failing to reproduce their usual developmental interactions, with obvious consequences on the reconstruction of the lost part of the appendage. In the regeneration of appendages composed of ‘true segments’, all the segments the animal is able to regenerate are already present (with extremely rare exceptions) following the first post-operative molt, whereas the regeneration of flagellar structures is often accomplished in steps, e.g., the first regenerate may show a reduced number of flagellomeres. Lack of autotomy is likely to be the plesiomorphic condition in arthropods, a condition maintained in the Myriochelata (myriapods plus chelicerates). Autotomy evolved within the Pancrusta- cea, perhaps close to the origin of a Malacostraca-Hexapoda clade, and was subsequently lost by some lineages, e.g., the Hemipteroidea and the endopterygote insects. -
Insects, Extatosoma Tiaratum (Macleay, 1826) by David S
The Phasmid Study Group JUNE 2013 NEWSLETTER No 130 ISSN 0268-3806 Extatosoma tiaratum © Paul Brock See Page 11. INDEX Page Content Page Content 2. The Colour Page 9. Phasmid Books – Gray 1833 3. Editorial 10. My Little Friends 3. PSG Membership Details 11. PSG Winter Meeting 19.1.13 3. The PSG Committee 12. Sticks go to School 4. PSG Website Update 13. Development of Phasmid Species List Part 5 4. Contributions to the Newsletter 15. A New Leaf Insect Rearer’s Book 4. Diary Dates 16. X-Bugs 5. PSG Summer Meeting Agenda 16. Dad! It’s Raining Stick Insects 6. PSG Summer Meeting 17. BIAZA Big Bug Bonanza 6. Livestock Report 17. Stick Talk 7. PSG Merchandise Update 18. Holiday to Colombia 7. Newsletter Survey Results 19. Questions 8. National Insect Week @ Bristol Zoo Gardens 20. Macleay’s Spectre It is to be directly understood that all views, opinions or theories, expressed in the pages of "The Newsletter“ are those of the author(s) concerned. All announcements of meetings, and requests for help or information, are accepted as bona fide. Neither the Editor, nor Officers of "The Phasmid Study Group", can be held responsible for any loss, embarrassment or injury that might be sustained by reliance thereon. THE COLOUR PAGE! Acrophylla titan female. Picture on left, becomes picture on right. Unknown species. See page 18. See page 9. Ctenomorpha Acanthoxyla spp, brown version. See page 8. Acanthoxyla spp, green version. See page 8. marginipennis. See page 10. Pictures on the left are from when Sir David Attenborough went to Bristol Zoo Gardens on 21st May 2013 to film for his “Natural Curiosities” series, where he focused on butterflies (regarding metamorphosis) with a short piece on parthenogenesis – hence the Phyllium giganteum he is holding in the photo. -
VKM Rapportmal
VKM Report 2016: 36 Assessment of the risks to Norwegian biodiversity from the import and keeping of terrestrial arachnids and insects Opinion of the Panel on Alien Organisms and Trade in Endangered species of the Norwegian Scientific Committee for Food Safety Report from the Norwegian Scientific Committee for Food Safety (VKM) 2016: Assessment of risks to Norwegian biodiversity from the import and keeping of terrestrial arachnids and insects Opinion of the Panel on Alien Organisms and Trade in Endangered species of the Norwegian Scientific Committee for Food Safety 29.06.2016 ISBN: 978-82-8259-226-0 Norwegian Scientific Committee for Food Safety (VKM) Po 4404 Nydalen N – 0403 Oslo Norway Phone: +47 21 62 28 00 Email: [email protected] www.vkm.no www.english.vkm.no Suggested citation: VKM (2016). Assessment of risks to Norwegian biodiversity from the import and keeping of terrestrial arachnids and insects. Scientific Opinion on the Panel on Alien Organisms and Trade in Endangered species of the Norwegian Scientific Committee for Food Safety, ISBN: 978-82-8259-226-0, Oslo, Norway VKM Report 2016: 36 Assessment of risks to Norwegian biodiversity from the import and keeping of terrestrial arachnids and insects Authors preparing the draft opinion Anders Nielsen (chair), Merethe Aasmo Finne (VKM staff), Maria Asmyhr (VKM staff), Jan Ove Gjershaug, Lawrence R. Kirkendall, Vigdis Vandvik, Gaute Velle (Authors in alphabetical order after chair of the working group) Assessed and approved The opinion has been assessed and approved by Panel on Alien Organisms and Trade in Endangered Species (CITES). Members of the panel are: Vigdis Vandvik (chair), Hugo de Boer, Jan Ove Gjershaug, Kjetil Hindar, Lawrence R. -
Importance of Ground Refuges for the Biodiversity in Agricultural Hedgerows
Ecological Indicators 72 (2017) 615–626 Contents lists available at ScienceDirect Ecological Indicators j ournal homepage: www.elsevier.com/locate/ecolind Importance of ground refuges for the biodiversity in agricultural hedgerows a,∗ a a b a S. Lecq , A. Loisel , F. Brischoux , S.J. Mullin , X. Bonnet a Centre d’Etudes Biologiques de Chizé, CEBC CNRS UPR 1934, 79360 Villiers en Bois, France b Department of Biology, Stephen F. Austin State University, Nacogdoches, TX 75962, USA a r a t i b s c t l e i n f o r a c t Article history: In most agro-ecosystems, hedgerows provide important habitat for many species. Unfortunately, large Received 3 March 2016 scale destruction of hedges has stripped this structure from many landscapes. Replanting programs have Received in revised form 18 August 2016 attempted to restore hedgerow habitats, but the methods employed often fail to replace the unique micro- Accepted 19 August 2016 habitats (complex matrix of stones, logs and roots found along the base of the hedge) that provided key Available online 11 September 2016 refuges to an array of animal species. We examined the influence of ground refuges on animal diversity in an agricultural landscape. We used non-lethal rapid biodiversity assessments to sample invertebrate Keywords: and vertebrate taxa in 69 hedges having different levels of herbaceous cover, tree cover, and refuge avail- Agricultural landscapes Bank ability. Co-inertia analyses compared hedge characteristics with the animal biodiversity sampled. We also used a functional index (accounting for body mass, trophic level, and metabolic mode of the species Habitat management Rapid biodiversity assessment sampled) to compare hedges. -
PHASMID STUDIES Volume 20
Printed ISSN 0966-0011 Online ISSN 1750-3329 PHASMID STUDIES Volume 20. January 2019. Editors: Edward Baker & Judith Marshall Phasmid Studies 20 Bacillus atticus Brunner von Wattenwyl, 1882: A New Species for the Albanian Fauna (Phasmida: Bacillidae) Slobodan Ivković Department of Biogeography, Trier University, Universitätsring 15, 54286 Trier, Germany [email protected] Eridan Xharahi Lagja 28 Nentori, Rruga Kristo Negovani, p. 215 Vlorë, Albania [email protected] Abstract The present study represents the first report of the presence of Bacillus atticus Brunner von Wattenwyl, 1882 in Albania. Key words Distribution, Pistacia lentiscus, Vlorë, stick insects. According to PSF (2018) the stick insects (order Phasmida) are represented worldwide with 3286 valid species and in Europe with 19 species. The most common phasmid genus in Europe is Bacillus Berthold, 1827, and it is represented with six species (atticus, grandii, inermis, lynceorum, rossius and whitei), reported from central and eastern parts of the Mediterranean Basin. Bacillus species are characterized by the slightly narrowed head, smooth or granulated pronotum which is longer than wide, strongly elongated meso and metanotum, tapered subgenital plate and short, stout cerci (Harz & Kaltenbach, 1976: 15, 18; Brock, 1994: 103). Herein, we record for the first timeB. atticus Brunner von Wattenwyl, 1882 for Albania. The new record is based on a photo of a female specimen taken on 11 VIII 2014, by EH and uploaded on iN- aturalist and Facebook page “Regjistri Elektronik i Specieve Shqiptare” (Fig. 1A-C). The specimen was observed on Jal beach, Vuno village, Vlorë region, Albania (40°06’51.7”N, 19°42’04.7”E). -
Revision of the Stick Insect Genus Leptynia: Description of New Taxa, Speciation Mechanism and Phylogeography
Contributions to Zoology, 81 (1) 25-42 (2012) Revision of the stick insect genus Leptynia: description of new taxa, speciation mechanism and phylogeography Valerio Scali1, 2, Liliana Milani1, Marco Passamonti1 1Department of Biologia Evoluzionistica Sperimentale, University of Bologna, Bologna, Italy 2 E-mail: [email protected] Key words: chromosome speciation, karyotype evolution, Leptynia annaepaulae spn., Leptynia attenuata sspn., SEM morphology Abstract Results ................................................................................................ 29 Discussion ......................................................................................... 35 Leptynia specimens were analyzed by karyotype analysis, mi- Acknowledgements ......................................................................... 36 tochondrial gene sequencing and SEM of bodies and eggs. Here References ......................................................................................... 36 we describe a new species, Leptynia annaepaulae, and three Appendix ........................................................................................... 38 subspecies of L. attenuata Pantel (L. attenuata attenuata, L. attenuata iberica, L. attenuata algarvica). The phylogeny of the genus Leptynia is congruent with a karyotype trend toward Introduction a reduction of chromosome number and the shift from the shared XX/X0 sex chromosome formula to the unusual XX/XY one. Chromosome repatterning appears to occur ahead of ge- According to the traditionally -
Description and DNA Barcoding of a New Iberian Species of Pijnackeria (Scali, 2009) from Sierra Nevada, Spain (Phasmida: Diapheromeridae)
Zootaxa 4058 (4): 535–550 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2015 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.4058.4.5 http://zoobank.org/urn:lsid:zoobank.org:pub:FE7DF00E-793A-45A2-972D-B35659B11712 Description and DNA barcoding of a new Iberian species of Pijnackeria (Scali, 2009) from Sierra Nevada, Spain (Phasmida: Diapheromeridae) PABLO VALERO & ANTONIO S. ORTIZ Department of Zoology and Physical Anthropology, Faculty of Veterinarian Sciences, University of Murcia, E-30100 Murcia, Spain. E-mail: [email protected] Abstract Male, female and egg of Pijnackeria recondita sp. n. are described from specimens collected at about 2,000 m in Sierra Nevada (Spain) feeding on Cytisus scoparius. The number of antennae segments in males, the smooth thorax in females and the different sculpturing of the egg capsule are the main differences from the other species of the genus. In addition, DNA barcode sequences (COI and COII) clearly differ from the other Iberian species of the genus. For COI, K2P minim- um distance between the new species and the most morphological related species, Pijnackeria hispanica (Bolívar, 1878), showed a mean of 8%. In the case of COII, comparison with the other species of Pijnackeria, showed a K2P minimum distance range from 8 to 10.5% (mean 9.2%); and comparison with the species of the related genus Leptynia, showed a K2P minimum distance range from 7.1 to 10.5%. Key words: Phasmida, Diapheromeridae, New species, Insect morphology, Insect barcoding, Sierra Nevada Spain Abbreviations. MNCN National Museum of Natural Sciences, Madrid, Spain.