Unleashing Formins to Remodel the Actin and Microtubule Cytoskeletons
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Snapshot: Formins Christian Baarlink, Dominique Brandt, and Robert Grosse University of Marburg, Marburg 35032, Germany
SnapShot: Formins Christian Baarlink, Dominique Brandt, and Robert Grosse University of Marburg, Marburg 35032, Germany Formin Regulators Localization Cellular Function Disease Association DIAPH1/DIA1 RhoA, RhoC Cell cortex, Polarized cell migration, microtubule stabilization, Autosomal-dominant nonsyndromic deafness (DFNA1), myeloproliferative (mDia1) phagocytic cup, phagocytosis, axon elongation defects, defects in T lymphocyte traffi cking and proliferation, tumor cell mitotic spindle invasion, defects in natural killer lymphocyte function DIAPH2 Cdc42 Kinetochore Stable microtubule attachment to kinetochore for Premature ovarian failure (mDia3) chromosome alignment DIAPH3 Rif, Cdc42, Filopodia, Filopodia formation, removing the nucleus from Increased chromosomal deletion of gene locus in metastatic tumors (mDia2) Rac, RhoB, endosomes erythroblast, endosome motility, microtubule DIP* stabilization FMNL1 (FRLα) Cdc42 Cell cortex, Phagocytosis, T cell polarity Overexpression is linked to leukemia and non-Hodgkin lymphoma microtubule- organizing center FMNL2/FRL3/ RhoC ND Cell motility Upregulated in metastatic colorectal cancer, chromosomal deletion is FHOD2 associated with mental retardation FMNL3/FRL2 Constituently Stress fi bers ND ND active DAAM1 Dishevelled Cell cortex Planar cell polarity ND DAAM2 ND ND ND Overexpressed in schizophrenia patients Human (Mouse) FHOD1 ROCK Stress fi bers Cell motility FHOD3 ND Nestin, sarcomere Organizing sarcomeres in striated muscle cells Single-nucleotide polymorphisms associated with type 1 diabetes -
How Models and Biological Experimentation Have Come Together to Reveal Mechanisms of Cytokinesis Daniel B
© 2018. Published by The Company of Biologists Ltd | Journal of Cell Science (2018) 131, jcs203570. doi:10.1242/jcs.203570 REVIEW Unite to divide – how models and biological experimentation have come together to reveal mechanisms of cytokinesis Daniel B. Cortes1, Adriana Dawes2, Jian Liu3, Masoud Nickaeen4, Wanda Strychalski5 and Amy Shaub Maddox1,* ABSTRACT these systems. Thus, cytokinesis can serve as a paradigm to Cytokinesis is the fundamental and ancient cellular process by which understand diverse behaviors of cellular motility. one cell physically divides into two. Cytokinesis in animal and fungal Mathematical modeling (see Glossary), combined with biological ‘ ’ cells is achieved by contraction of an actomyosin cytoskeletal ring experimentation (i.e. wet lab approaches including microscopy, assembled in the cell cortex, typically at the cell equator. Cytokinesis genetics, biochemistry and biophysics), has significantly advanced ‘ ’ is essential for the development of fertilized eggs into multicellular our understanding of cytokinesis. Herein, we use the word modeling organisms and for homeostatic replenishment of cells. Correct to collectively refer to diverse theoretical approaches, in which execution of cytokinesis is also necessary for genome stability and biological, biochemical and biophysical processes are described with the evasion of diseases including cancer. Cytokinesis has fascinated mathematical equations. These approaches, often historically rooted scientists for well over a century, but its speed and dynamics make in, and motivated by, problems in physics and chemistry, include experiments challenging to perform and interpret. The presence continuum mechanics modeling and agent-based modeling (see of redundant mechanisms is also a challenge to understand Glossary). The following references can serve as a starting point for cytokinesis, leaving many fundamental questions unresolved. -
Profilin and Formin Constitute a Pacemaker System for Robust Actin
RESEARCH ARTICLE Profilin and formin constitute a pacemaker system for robust actin filament growth Johanna Funk1, Felipe Merino2, Larisa Venkova3, Lina Heydenreich4, Jan Kierfeld4, Pablo Vargas3, Stefan Raunser2, Matthieu Piel3, Peter Bieling1* 1Department of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany; 2Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany; 3Institut Curie UMR144 CNRS, Paris, France; 4Physics Department, TU Dortmund University, Dortmund, Germany Abstract The actin cytoskeleton drives many essential biological processes, from cell morphogenesis to motility. Assembly of functional actin networks requires control over the speed at which actin filaments grow. How this can be achieved at the high and variable levels of soluble actin subunits found in cells is unclear. Here we reconstitute assembly of mammalian, non-muscle actin filaments from physiological concentrations of profilin-actin. We discover that under these conditions, filament growth is limited by profilin dissociating from the filament end and the speed of elongation becomes insensitive to the concentration of soluble subunits. Profilin release can be directly promoted by formin actin polymerases even at saturating profilin-actin concentrations. We demonstrate that mammalian cells indeed operate at the limit to actin filament growth imposed by profilin and formins. Our results reveal how synergy between profilin and formins generates robust filament growth rates that are resilient to changes in the soluble subunit concentration. DOI: https://doi.org/10.7554/eLife.50963.001 *For correspondence: peter.bieling@mpi-dortmund. mpg.de Introduction Competing interests: The Eukaryotic cells move, change their shape and organize their interior through dynamic actin net- authors declare that no works. -
Role of G-Protein Regulation of Formins During Gradient Tracking in Saccharomyces Cerevisiae
The University of Maine DigitalCommons@UMaine Honors College Spring 5-2017 Role of G-protein Regulation of Formins during Gradient Tracking in Saccharomyces cerevisiae Stephen Soohey University of Maine Follow this and additional works at: https://digitalcommons.library.umaine.edu/honors Recommended Citation Soohey, Stephen, "Role of G-protein Regulation of Formins during Gradient Tracking in Saccharomyces cerevisiae" (2017). Honors College. 261. https://digitalcommons.library.umaine.edu/honors/261 This Honors Thesis is brought to you for free and open access by DigitalCommons@UMaine. It has been accepted for inclusion in Honors College by an authorized administrator of DigitalCommons@UMaine. For more information, please contact [email protected]. ROLE OF G-PROTEIN REGULATION OF FORMINS DURING GRADIENT TRACKING IN SACCHAROMYCES CEREVISIAE by Stephen C. Soohey A Thesis Submitted in Partial Fulfillment of the Requirements for a Degree with Honors (Molecular and Cellular Biology) The Honors College University of Maine May 2017 Advisory Committee: Joshua Kelley, Assistant Professor of Biochemistry, Advisor Sally Molloy, Assistant Professor of Genomics Robert Gundersen, Chair of Molecular & Biomedical Sciences Edward Bernard, Laboratory Coordinator and Lecturer Sarah Harlan-Haughey, Assistant Professor of English and Honors ABSTRACT The yeast Saccharomyces cerevisiae uses a GPCR to direct the pheromone response pathway. Haploid yeast detect and respond to pheromone gradients produced by the opposite mating type to find a mating partner. At a high dose of pheromone, yeast will form a short, focused mating projection in order to mate with yeast that are close by. At lower doses of pheromone, the yeast form a broader projection which grows towards the source of pheromone. -
The Hippo Pathway Target, YAP, Promotes Metastasis Through Its TEAD-Interaction Domain
The Hippo pathway target, YAP, promotes metastasis PNAS PLUS through its TEAD-interaction domain John M. Lamara, Patrick Sterna,1, Hui Liua,b,2, Jeffrey W. Schindlera,b, Zhi-Gang Jianga,c, and Richard O. Hynesa,b,c,3 cHoward Hughes Medical Institute, aKoch Institute for Integrative Cancer Research, and bDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139 Contributed by Richard O. Hynes, July 23, 2012 (sent for review February 28, 2012) The transcriptional coactivator Yes-associated protein (YAP) is 14-3-3 proteins (1, 9) and α-catenin (10, 11). LATS-mediated a major regulator of organ size and proliferation in vertebrates. phosphorylation of YAP also can promote YAP ubiquitination As such, YAP can act as an oncogene in several tissue types if its and subsequent proteasomal degradation (12). Several addi- activity is increased aberrantly. Although no activating mutations tional proteins are involved in Hippo pathway-dependent and in the yap1 gene have been identified in human cancer, yap1 is -independent regulation of YAP and TAZ, including the FERM located on the 11q22 amplicon, which is amplified in several hu- domain proteins Merlin/NF2 and FRMD6, the junctional pro- man tumors. In addition, mutations or epigenetic silencing of teins ZO-2 and AJUB, the polarity complex proteins Crumbs, members of the Hippo pathway, which represses YAP function, Angiomotin, Scribble, and KIBRA, and the protein phosphatases have been identified in human cancers. Here we demonstrate that, PP2A and ASPP1 (6–8). Thus, YAP protein levels and activity are in addition to increasing tumor growth, increased YAP activity is regulated tightly at multiple levels. -
WW Domains Provide a Platform for the Assembly of Multiprotein Networks† Robert J
MOLECULAR AND CELLULAR BIOLOGY, Aug. 2005, p. 7092–7106 Vol. 25, No. 16 0270-7306/05/$08.00ϩ0 doi:10.1128/MCB.25.16.7092–7106.2005 Copyright © 2005, American Society for Microbiology. All Rights Reserved. WW Domains Provide a Platform for the Assembly of Multiprotein Networks† Robert J. Ingham,1 Karen Colwill,1 Caley Howard,1 Sabine Dettwiler,2 Caesar S. H. Lim,1,3 Joanna Yu,1,3 Kadija Hersi,1 Judith Raaijmakers,1 Gerald Gish,1 Geraldine Mbamalu,1 Lorne Taylor,1 Benny Yeung,1 Galina Vassilovski,1 Manish Amin,1 Fu Chen,4 Liudmila Matskova,4 Go¨sta Winberg,4 Ingemar Ernberg,4 Rune Linding,1 Paul O’Donnell,1 Andrei Starostine,1 Walter Keller,2 Pavel Metalnikov,1Chris Stark,1 and Tony Pawson1,3* Samuel Lunenfeld Research Institute, Mount Sinai Hospital, Toronto, Ontario M5G 1X5, Canada1; Department of Molecular and Medical Genetics, University of Toronto, Toronto, Ontario M5S 1A8, Canada3; Department of Cell Biology, Biozentrum, University of Basel, Klingelbergstrasse 70, CH-4056 Basel, Switzerland2; and Karolinska Institutet, Microbiology and Tumor Biology Center (MTC), SE-171 Stockholm, Sweden4 Received 8 April 2005/Returned for modification 5 May 2005/Accepted 22 May 2005 WW domains are protein modules that mediate protein-protein interactions through recognition of proline- rich peptide motifs and phosphorylated serine/threonine-proline sites. To pursue the functional properties of WW domains, we employed mass spectrometry to identify 148 proteins that associate with 10 human WW domains. Many of these proteins represent novel WW domain-binding partners and are components of multiprotein complexes involved in molecular processes, such as transcription, RNA processing, and cytoskel- etal regulation. -
Rho Activation of Mdia Formins Is Modulated by an Interaction with Inverted Formin 2 (INF2)
Rho activation of mDia formins is modulated by an interaction with inverted formin 2 (INF2) Hua Suna,b,c, Johannes S. Schlondorffb,c, Elizabeth J. Brownc,d, Henry N. Higgse, and Martin R. Pollakb,c,1 aNephrology Division, Department of Medicine, Shanghai Children’s Medical Center, Shanghai Jiaotong University School of Medicine, Shanghai 200127, China; bNephrology Division, Department of Medicine, Beth Israel Deaconess Medical Center, Boston, MA 02215; cDepartment of Medicine, Harvard Medical School, Boston, MA 02115; dDivision of Nephrology, Department of Medicine, Children’s Hospital, Boston, MA 02115; and eDepartment of Biochemistry, Dartmouth Medical School, Hanover, NH 03755 Edited by Christine E. Seidman, Harvard Medical School, Boston, MA, and approved December 30, 2010 (received for review November 12, 2010) Inverted formin 2 (INF2) encodes a member of the diaphanous glomerular slit diaphragm (11–13). The importance of the actin subfamily of formin proteins. Mutations in INF2 cause human cytoskeleton in maintaining the glomerular filtration barrier is kidney disease characterized by focal and segmental glomerulo- supported by the fact that mutations in α-actinin-4, an actin cross- sclerosis. Disease-causing mutations occur only in the diaphanous linking protein, cause a similar form of autosomal-dominant FSGS inhibitory domain (DID), suggesting specific roles for this domain in (14). Numerous lines of evidence support the notion that podo- the pathogenesis of disease. In a yeast two-hybrid screen, we cytes are highly sensitive to perturbations in their actin cytoskel- identified the diaphanous autoregulatory domains (DADs) of the eton (15). Consistent with this, FSGS-associated mutant forms of mammalian diaphanous-related formins (mDias) mDia1, mDia2, INF2 induce distinct patterns of actin polymerization in cultured and mDia 3 as INF2_DID-interacting partners. -
Cytoskeleton: Formins Induce Nuclear Actin Assembly
RESEARCH HIGHLIGHTS Nature Reviews Molecular Cell Biology | AOP, published online 24 April 2013; doi:10.1038/nrm3580 CYTOSKELETON nuclear export signal (NES-Dia1ct)) that formins drive actin assembly in the or constitutively active MAL. nucleus in response to serum. Moreover, they found that nuclear So, can MAL–SRF activity be induced Formins induce nuclear actin polymerization was required for upon nuclear mDia activation? Dia1ct-driven SRF activity, as Dia1ct To activate endogenous formins in actin assembly did not induce SRF activity when an the nucleus, the authors used an actin mutant that cannot polymerize optogenetic tool, whereby mDia Formins promote the assembly of actin was overexpressed in the nucleus. autoinhibition is released by the filaments in the cytoplasm. This leads Interestingly, only nuclear Dia1ct but not photoactivation of a diaphanous formins drive to the release of MAL (megakaryocytic cytoplasmic NES-Dia1ct could prevent autoregulatory domain. Indeed, acute leukaemia; also known as MRTF) the sequestration of MAL by nuclear repeated illumination of cells, and actin assembly from monomeric G-actin and the G-actin, which suggests that nuclear thus mDia activation, resulted in the in the nucleus accumulation of this cofactor, which actin polymerization releases MAL from reversible assembly of nuclear actin stimulates serum response factor G-actin. Moreover, cells expressing a filaments, MAL nuclear accumulation (SRF)-dependent expression of dominant-negative mDia mutant that and SRF activity. cytoskeletal target genes, in the localizes exclusively to the nucleus Together, these results show that nucleus. Although diaphanous-related exhibited decreased serum-induced the assembly of dynamic nuclear formins (mDia) have been detected in SRF activity compared with control cells, actin networks in response to serum is the nucleus, it was unclear whether they suggesting that nuclear mDia is required dependent on nuclear mDia activation. -
The Formin FMNL3 Is a Cytoskeletal Regulator of Angiogenesis
Dartmouth College Dartmouth Digital Commons Dartmouth Scholarship Faculty Work 2012 The Formin FMNL3 is a Cytoskeletal Regulator of Angiogenesis Clare Hetheridge University of Bristol Alice N. Scott University of Bristol Rajeeb K. Swain Birmingham University John W. Copeland University of Ottawa Henry N. Higgs Dartmouth College Follow this and additional works at: https://digitalcommons.dartmouth.edu/facoa Part of the Medical Biochemistry Commons Dartmouth Digital Commons Citation Hetheridge, Clare; Scott, Alice N.; Swain, Rajeeb K.; Copeland, John W.; and Higgs, Henry N., "The Formin FMNL3 is a Cytoskeletal Regulator of Angiogenesis" (2012). Dartmouth Scholarship. 1731. https://digitalcommons.dartmouth.edu/facoa/1731 This Article is brought to you for free and open access by the Faculty Work at Dartmouth Digital Commons. It has been accepted for inclusion in Dartmouth Scholarship by an authorized administrator of Dartmouth Digital Commons. For more information, please contact [email protected]. 1420 Research Article The formin FMNL3 is a cytoskeletal regulator of angiogenesis Clare Hetheridge1, Alice N. Scott1, Rajeeb K. Swain2, John W. Copeland3, Henry N. Higgs4, Roy Bicknell2 and Harry Mellor1,* 1School of Biochemistry, Medical Sciences Building, University Walk, University of Bristol, Bristol, BS8 1TD, UK 2Institute for Biomedical Research, Birmingham University Medical School, Vincent Drive, Birmingham, B15 2TT, UK 3University of Ottawa, Department of Cellular and Molecular Medicine, Room 3206, 451 Smyth Road, Ottawa, Ontario, K1H 8M5, Canada 4Dartmouth Medical School, Department of Biochemistry, Room 413, 7200 Vail Building, Hanover, NH 03755-3844, USA *Author for correspondence ([email protected]) Accepted 28 September 2011 Journal of Cell Science 125, 1420–1428 ß 2012. -
The Formin Homology Protein Mdia1 Regulates Dynamics of Microtubules and Their Effect on Focal Adhesion Growth
- 1 - The formin homology protein mDia1 regulates dynamics of microtubules and their effect on focal adhesion growth Christoph Ballestrem,* Natalia Schiefermeier,*ƒ Julia Zonis,* Michael Shtutman,* Zvi Kam,* Shuh Narumiya, Arthur S. Alberts, ⁄ and Alexander D. Bershadsky* *Department of Molecular Cell Biology, The Weizmann Institute of Science, Rehovot 76100, Israel; Department of Pharmacology, Kyoto University Faculty of Medicine, Kyoto, Japan; ⁄Van Andel Research Institute, Grand Rapids, MI, USA. ƒThis author made significant contribution to this paper Address correspondence to: Alexander Bershadsky Department of Molecular Cell Biology The Weizmann Institute of Science P.O. Box 26, Rehovot 76100, Israel Tel.: 972-8-9342884 Fax: 972-8-9344125 E-mail: [email protected] Total characters: 59107 Running Title: mDia1 regulates dynamics of microtubules Keywords: mDia, formin homology protein, microtubule, focal adhesion, actin - 2 - Abstract The formin homology protein, mDia1, is a major effector of Rho controlling, together with the Rho-kinase (ROCK), the formation of focal adhesions and stress fibers. Here we show that a constitutively active form of mDia1 (mDia1∆N3) affects the dynamics of microtubules at three stages of their life. We found that in cells expressing mDia1∆N3, (1) the growth rate at the microtubule plus-end decreased by half, (2) the rates of microtubule plus-end growth and shortening at the cell periphery decreased while the frequency of catastrophes and rescue events remained unchanged, and (3) mDia1∆N3 expression in cytoplasts without centrosome stabilized free microtubule minus-ends. This stabilization required the activity of another Rho target, ROCK. Interestingly, mDia1∆N3 as well as endogenous mDia1, localized at the centrosome. -
High-Throughput Methods for Identification of Protein-Protein Interactions Involving Short Linear Motifs Cecilia Blikstad and Ylva Ivarsson*
Blikstad and Ivarsson Cell Communication and Signaling (2015) 13:38 DOI 10.1186/s12964-015-0116-8 REVIEW Open Access High-throughput methods for identification of protein-protein interactions involving short linear motifs Cecilia Blikstad and Ylva Ivarsson* Abstract Interactions between modular domains and short linear motifs (3–10 amino acids peptide stretches) are crucial for cell signaling. The motifs typically reside in the disordered regions of the proteome and the interactions are often transient, allowing for rapid changes in response to changing stimuli. The properties that make domain-motif interactions suitable for cell signaling also make them difficult to capture experimentally and they are therefore largely underrepresented in the known protein-protein interaction networks. Most of the knowledge on domain-motif interactions is derived from low-throughput studies, although there exist dedicated high-throughput methods for the identification of domain-motif interactions. The methods include arrays of peptides or proteins, display of peptides on phage or yeast, and yeast-two-hybrid experiments. We here provide a survey of scalable methods for domain-motif interaction profiling. These methods have frequently been applied to a limited number of ubiquitous domain families. It is now time to apply them to a broader set of peptide binding proteins, to provide a comprehensive picture of the linear motifs in the human proteome and to link them to their potential binding partners. Despite the plethora of methods, it is still a challenge for most approaches to identify interactions that rely on post-translational modification or context dependent or conditional interactions, suggesting directions for further method development. -
Phosphoserine/Threonine Binding Minireview Domains: You Can’T Pserious?
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Structure, Vol. 9, R33±R38, March, 2001, 2001 Elsevier Science Ltd. All rights reserved. PII S0969-2126(01)00580-9 PhosphoSerine/Threonine Binding Minireview Domains: You Can't pSERious? Michael B. Yaffe,*³ and Stephen J. Smerdon²³ 14-3-3 Proteins *Center for Cancer Research The term ª14-3-3º denotes a family of dimeric ␣-helical Massachusetts Institute of Technology pSer/Thr binding proteins present in high abundance in 77 Massachusetts Avenue, E18-580 all eukaryotic cells [1]. 14-3-3 proteins were the first Cambridge, Massachusetts 02139 molecules to be recognized as distinct pSer/Thr binding ² Division of Protein Structure proteins, forming tight complexes with phosphorylated National Institute for Medical Research ligands containing either of two sequence motifs, R[S/ The Ridgeway Ar]XpSXP and RX[Ar/S]XpSXP, respectively, where pS Mill Hill denotes both phosphoserine and phosphothreonine, London NW7 1AA and Ar denotes aromatic residues [2, 3]. In addition, a United Kingdom few 14-3-3 binding ligands have been identified whose sequences deviate significantly from these motifs or do not require phosphorylation for binding. Summary Over 50 distinct substrates have been identified that bind to 14-3-3, many of which play critical roles in regu- The fundamental biological importance of protein phos- lating progression through the cell cycle, activation of phorylation is underlined by the existence of more than the Erk1/2 subfamily of MAP kinases, initiation of apo- 500 protein kinase genes within the human genome.