Parvoviridae
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Molecular Analysis of Carnivore Protoparvovirus Detected in White Blood Cells of Naturally Infected Cats
Balboni et al. BMC Veterinary Research (2018) 14:41 DOI 10.1186/s12917-018-1356-9 RESEARCHARTICLE Open Access Molecular analysis of carnivore Protoparvovirus detected in white blood cells of naturally infected cats Andrea Balboni1, Francesca Bassi1, Stefano De Arcangeli1, Rosanna Zobba2, Carla Dedola2, Alberto Alberti2 and Mara Battilani1* Abstract Background: Cats are susceptible to feline panleukopenia virus (FPV) and canine parvovirus (CPV) variants 2a, 2b and 2c. Detection of FPV and CPV variants in apparently healthy cats and their persistence in white blood cells (WBC) and other tissues when neutralising antibodies are simultaneously present, suggest that parvovirus may persist long-term in the tissues of cats post-infection without causing clinical signs. The aim of this study was to screen a population of 54 cats from Sardinia (Italy) for the presence of both FPV and CPV DNA within buffy coat samples using polymerase chain reaction (PCR). The DNA viral load, genetic diversity, phylogeny and antibody titres against parvoviruses were investigated in the positive cats. Results: Carnivore protoparvovirus 1 DNA was detected in nine cats (16.7%). Viral DNA was reassembled to FPV in four cats and to CPV (CPV-2b and 2c) in four cats; one subject showed an unusually high genetic complexity with mixed infection involving FPV and CPV-2c. Antibodies against parvovirus were detected in all subjects which tested positive to DNA parvoviruses. Conclusions: The identification of FPV and CPV DNA in the WBC of asymptomatic cats, despite the presence of specific antibodies against parvoviruses, and the high genetic heterogeneity detected in one sample, confirmed the relevant epidemiological role of cats in parvovirus infection. -
ICTV Virus Taxonomy Profile: Parvoviridae
ICTV VIRUS TAXONOMY PROFILES Cotmore et al., Journal of General Virology 2019;100:367–368 DOI 10.1099/jgv.0.001212 ICTV ICTV Virus Taxonomy Profile: Parvoviridae Susan F. Cotmore,1,* Mavis Agbandje-McKenna,2 Marta Canuti,3 John A. Chiorini,4 Anna-Maria Eis-Hubinger,5 Joseph Hughes,6 Mario Mietzsch,2 Sejal Modha,6 Mylene Ogliastro,7 Judit J. Penzes, 2 David J. Pintel,8 Jianming Qiu,9 Maria Soderlund-Venermo,10 Peter Tattersall,1,11 Peter Tijssen12 and ICTV Report Consortium Abstract Members of the family Parvoviridae are small, resilient, non-enveloped viruses with linear, single-stranded DNA genomes of 4–6 kb. Viruses in two subfamilies, the Parvovirinae and Densovirinae, are distinguished primarily by their respective ability to infect vertebrates (including humans) versus invertebrates. Being genetically limited, most parvoviruses require actively dividing host cells and are host and/or tissue specific. Some cause diseases, which range from subclinical to lethal. A few require co-infection with helper viruses from other families. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the Parvoviridae, which is available at www.ictv.global/report/parvoviridae. Table 1. Characteristics of the family Parvoviridae Typical member: human parvovirus B19-J35 G1 (AY386330), species Primate erythroparvovirus 1, genus Erythroparvovirus, subfamily Parvovirinae Virion Small, non-enveloped, T=1 icosahedra, 23–28 nm in diameter Genome Linear, single-stranded DNA of 4–6 kb with short terminal hairpins Replication Rolling hairpin replication, a linear adaptation of rolling circle replication. Dynamic hairpin telomeres prime complementary strand and duplex strand-displacement synthesis; high mutation and recombination rates Translation Capped mRNAs; co-linear ORFs accessed by alternative splicing, non-consensus initiation or leaky scanning Host range Parvovirinae: mammals, birds, reptiles. -
Protoparvovirus Knocking at the Nuclear Door
viruses Review Protoparvovirus Knocking at the Nuclear Door Elina Mäntylä 1 ID , Michael Kann 2,3,4 and Maija Vihinen-Ranta 1,* 1 Department of Biological and Environmental Science and Nanoscience Center, University of Jyvaskyla, FI-40500 Jyvaskyla, Finland; elina.h.mantyla@jyu.fi 2 Laboratoire de Microbiologie Fondamentale et Pathogénicité, University of Bordeaux, UMR 5234, F-33076 Bordeaux, France; [email protected] 3 Centre national de la recherche scientifique (CNRS), Microbiologie Fondamentale et Pathogénicité, UMR 5234, F-33076 Bordeaux, France 4 Centre Hospitalier Universitaire de Bordeaux, Service de Virologie, F-33076 Bordeaux, France * Correspondence: maija.vihinen-ranta@jyu.fi; Tel.: +358-400-248-118 Received: 5 September 2017; Accepted: 29 September 2017; Published: 2 October 2017 Abstract: Protoparvoviruses target the nucleus due to their dependence on the cellular reproduction machinery during the replication and expression of their single-stranded DNA genome. In recent years, our understanding of the multistep process of the capsid nuclear import has improved, and led to the discovery of unique viral nuclear entry strategies. Preceded by endosomal transport, endosomal escape and microtubule-mediated movement to the vicinity of the nuclear envelope, the protoparvoviruses interact with the nuclear pore complexes. The capsids are transported actively across the nuclear pore complexes using nuclear import receptors. The nuclear import is sometimes accompanied by structural changes in the nuclear envelope, and is completed by intranuclear disassembly of capsids and chromatinization of the viral genome. This review discusses the nuclear import strategies of protoparvoviruses and describes its dynamics comprising active and passive movement, and directed and diffusive motion of capsids in the molecularly crowded environment of the cell. -
Diversity and Evolution of Viral Pathogen Community in Cave Nectar Bats (Eonycteris Spelaea)
viruses Article Diversity and Evolution of Viral Pathogen Community in Cave Nectar Bats (Eonycteris spelaea) Ian H Mendenhall 1,* , Dolyce Low Hong Wen 1,2, Jayanthi Jayakumar 1, Vithiagaran Gunalan 3, Linfa Wang 1 , Sebastian Mauer-Stroh 3,4 , Yvonne C.F. Su 1 and Gavin J.D. Smith 1,5,6 1 Programme in Emerging Infectious Diseases, Duke-NUS Medical School, Singapore 169857, Singapore; [email protected] (D.L.H.W.); [email protected] (J.J.); [email protected] (L.W.); [email protected] (Y.C.F.S.) [email protected] (G.J.D.S.) 2 NUS Graduate School for Integrative Sciences and Engineering, National University of Singapore, Singapore 119077, Singapore 3 Bioinformatics Institute, Agency for Science, Technology and Research, Singapore 138671, Singapore; [email protected] (V.G.); [email protected] (S.M.-S.) 4 Department of Biological Sciences, National University of Singapore, Singapore 117558, Singapore 5 SingHealth Duke-NUS Global Health Institute, SingHealth Duke-NUS Academic Medical Centre, Singapore 168753, Singapore 6 Duke Global Health Institute, Duke University, Durham, NC 27710, USA * Correspondence: [email protected] Received: 30 January 2019; Accepted: 7 March 2019; Published: 12 March 2019 Abstract: Bats are unique mammals, exhibit distinctive life history traits and have unique immunological approaches to suppression of viral diseases upon infection. High-throughput next-generation sequencing has been used in characterizing the virome of different bat species. The cave nectar bat, Eonycteris spelaea, has a broad geographical range across Southeast Asia, India and southern China, however, little is known about their involvement in virus transmission. -
Diversity and Evolution of Novel Invertebrate DNA Viruses Revealed by Meta-Transcriptomics
viruses Article Diversity and Evolution of Novel Invertebrate DNA Viruses Revealed by Meta-Transcriptomics Ashleigh F. Porter 1, Mang Shi 1, John-Sebastian Eden 1,2 , Yong-Zhen Zhang 3,4 and Edward C. Holmes 1,3,* 1 Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life & Environmental Sciences and Sydney Medical School, The University of Sydney, Sydney, NSW 2006, Australia; [email protected] (A.F.P.); [email protected] (M.S.); [email protected] (J.-S.E.) 2 Centre for Virus Research, Westmead Institute for Medical Research, Westmead, NSW 2145, Australia 3 Shanghai Public Health Clinical Center and School of Public Health, Fudan University, Shanghai 201500, China; [email protected] 4 Department of Zoonosis, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing 102206, China * Correspondence: [email protected]; Tel.: +61-2-9351-5591 Received: 17 October 2019; Accepted: 23 November 2019; Published: 25 November 2019 Abstract: DNA viruses comprise a wide array of genome structures and infect diverse host species. To date, most studies of DNA viruses have focused on those with the strongest disease associations. Accordingly, there has been a marked lack of sampling of DNA viruses from invertebrates. Bulk RNA sequencing has resulted in the discovery of a myriad of novel RNA viruses, and herein we used this methodology to identify actively transcribing DNA viruses in meta-transcriptomic libraries of diverse invertebrate species. Our analysis revealed high levels of phylogenetic diversity in DNA viruses, including 13 species from the Parvoviridae, Circoviridae, and Genomoviridae families of single-stranded DNA virus families, and six double-stranded DNA virus species from the Nudiviridae, Polyomaviridae, and Herpesviridae, for which few invertebrate viruses have been identified to date. -
Soybean Thrips (Thysanoptera: Thripidae) Harbor Highly Diverse Populations of Arthropod, Fungal and Plant Viruses
viruses Article Soybean Thrips (Thysanoptera: Thripidae) Harbor Highly Diverse Populations of Arthropod, Fungal and Plant Viruses Thanuja Thekke-Veetil 1, Doris Lagos-Kutz 2 , Nancy K. McCoppin 2, Glen L. Hartman 2 , Hye-Kyoung Ju 3, Hyoun-Sub Lim 3 and Leslie. L. Domier 2,* 1 Department of Crop Sciences, University of Illinois, Urbana, IL 61801, USA; [email protected] 2 Soybean/Maize Germplasm, Pathology, and Genetics Research Unit, United States Department of Agriculture-Agricultural Research Service, Urbana, IL 61801, USA; [email protected] (D.L.-K.); [email protected] (N.K.M.); [email protected] (G.L.H.) 3 Department of Applied Biology, College of Agriculture and Life Sciences, Chungnam National University, Daejeon 300-010, Korea; [email protected] (H.-K.J.); [email protected] (H.-S.L.) * Correspondence: [email protected]; Tel.: +1-217-333-0510 Academic Editor: Eugene V. Ryabov and Robert L. Harrison Received: 5 November 2020; Accepted: 29 November 2020; Published: 1 December 2020 Abstract: Soybean thrips (Neohydatothrips variabilis) are one of the most efficient vectors of soybean vein necrosis virus, which can cause severe necrotic symptoms in sensitive soybean plants. To determine which other viruses are associated with soybean thrips, the metatranscriptome of soybean thrips, collected by the Midwest Suction Trap Network during 2018, was analyzed. Contigs assembled from the data revealed a remarkable diversity of virus-like sequences. Of the 181 virus-like sequences identified, 155 were novel and associated primarily with taxa of arthropod-infecting viruses, but sequences similar to plant and fungus-infecting viruses were also identified. -
Chronic Viral Infections Vs. Our Immune System: Revisiting Our View of Viruses As Pathogens
Chronic Viral Infections vs. Our Immune System: Revisiting our view of viruses as pathogens Tiffany A. Reese Assistant Professor Departments of Immunology and Microbiology Challenge your idea of classic viral infection and disease • Define the microbiome and the virome • Brief background on persistent viruses • Illustrate how viruses change disease susceptibility – mutualistic symbiosis – gene + virus = disease phenotype – virome in immune responses Bacteria-centric view of the microbiome The microbiome defined Definition of microbiome – Merriam-Webster 1 :a community of microorganisms (such as bacteria, fungi, and viruses) that inhabit a particular environment and especially the collection of microorganisms living in or on the human body 2 :the collective genomes of microorganisms inhabiting a particular environment and especially the human body Virome Ø Viral component of the microbiome Ø Includes both commensal and pathogenic viruses Ø Viruses that infect host cells Ø Virus-derived elements in host chromosomes Ø Viruses that infect other organisms in the body e.g. phage/bacteria Viruses are everywhere! • “intracellular parasites with nucleic acids that are capable of directing their own replication and are not cells” – Roossinck, Nature Reviews Microbiology 2011. • Viruses infect all living things. • We are constantly eating and breathing viruses from our environment • Only a small subset of viruses cause disease. • We even carry viral genomes as part of our own genetic material! Diverse viruses all over the body Adenoviridae Picornaviridae -
Parvovirus Infections
EAZWV Transmissible Disease Fact Sheet Sheet No. 46 PARVOVIRUS INFECTIONS ANIMAL TRANS- CLINICAL FATAL TREATMENT PREVENTION GROUP MISSION SIGNS DISEASE ? & CONTROL AFFECTED Felidae, Faecal-oral Diarrhoea, Variable Interferons, In houses Canidae, route faeces are depending on hyperimmun- Procyonidae, pasty, blood the immune sera Mustelidae, flecked to status of the in zoos Ursidae, and haemorrhagic, animal and virus Quarantine for at Viveridae leukopenia, strain least 30 days, lymphopenia, vaccination feline ataxia, canine myocarditis Fact sheet compiled by Last update Kai Frölich, Institute for Zoo and Wildlife Research, February 2002 Berlin, Germany Fact sheet reviewed by U. Truyen, Tiergesundheitsdienst Bayern e.V, Poing, Germany G. Strauß, Tierpark Berlin, Berlin, Germany Susceptible animal groups Species from six families (Felidae, Canidae, Procyonidae, Mustelidae, Ursidae, and Viveridae) in the order Carnivora are suspected of being susceptible to parvovirus of the FPV subgroup. Also syndromes resembling parvovirus infection have been described in an insectivore and a rodent. Causative organism The feline parvovirus subgroup viruses are unenveloped and contain a single-stranded DNA genome about 5.1 kb. The virus capsids are the primary determinants of host range; differences of only two or three amino acids in three areas on or near the surface determine the ability of CPV and FPV to replicate in dogs or cats or their cultured cells. The amplification of parvovirus DNA sequences intermediate between FPV and CPV from tissues of red foxes (Vulpes vulpes) from Europe suggests that wildlife may have played a role in the interspecies transfer of feline parvovirus subgroup virus to dogs. As currently understood, the FPV subgroup is rooted in FPV, from which mink enteritis virus (MEV) and racoon parvovirus (RPV) isolates are indistinguishable, and blue fox parvovirus (BFPV) is a minor variant. -
Module1: General Concepts
NPTEL – Biotechnology – General Virology Module1: General Concepts Lecture 1: Virus history The history of virology goes back to the late 19th century, when German anatomist Dr Jacob Henle (discoverer of Henle’s loop) hypothesized the existence of infectious agent that were too small to be observed under light microscope. This idea fails to be accepted by the present scientific community in the absence of any direct evidence. At the same time three landmark discoveries came together that formed the founding stone of what we call today as medical science. The first discovery came from Louis Pasture (1822-1895) who gave the spontaneous generation theory from his famous swan-neck flask experiment. The second discovery came from Robert Koch (1843-1910), a student of Jacob Henle, who showed for first time that the anthrax and tuberculosis is caused by a bacillus, and finally Joseph Lister (1827-1912) gave the concept of sterility during the surgery and isolation of new organism. The history of viruses and the field of virology are broadly divided into three phases, namely discovery, early and modern. The discovery phase (1886-1913) In 1879, Adolf Mayer, a German scientist first observed the dark and light spot on infected leaves of tobacco plant and named it tobacco mosaic disease. Although he failed to describe the disease, he showed the infectious nature of the disease after inoculating the juice extract of diseased plant to a healthy one. The next step was taken by a Russian scientist Dimitri Ivanovsky in 1890, who demonstrated that sap of the leaves infected with tobacco mosaic disease retains its infectious property even after its filtration through a Chamberland filter. -
Derived Vaccine Protects Target Aniinals Against a Viral Disease
© 1997 Nature Publishing Group http://www.nature.com/naturebiotechnology RESEARCH • Plant -derived vaccine protects target aniinals against a viral disease Kristian Dalsgaard*, Ase Uttenthal1•2, Tim D. Jones3, Fan Xu3, Andrew Merryweather3, William D.O. Hamilton3, Jan P.M. Langeveld4, Ronald S. Boshuizen4, S0ren Kamstrup, George P. Lomonossoffe, Claudine Porta8, Carmen Vela5, J. Ignacio Casal5, Rob H. Meloen4, and Paul B. Rodgers3 Danish Veterinary Institute for Virus Research, Lindholm, DK-4771 Kalvehave, Denmark. 'Danish Veterinary Laboratory, Biilowsvej 27, DK-1790 Copenhagen V, Denmark. 'Present address: Danish Fur Breeders Association, Langagervej 74, DK-2600 Glostrup, Denmark.'Axis Genetics pie., Babmham, Cambridge CB2 4AZ, UK. 'Institute for Animal Science and Health (ID-DLO), P.O. Box 65 NL-8200 AB, Lelystad, The Netherlands. 'In~enasa, C Hermanos Garcia Noblejas 41-2, E-28037 Madrid, Spain. 'John Innes Centre, Colney Lane, Norwich NR4 lUH, UK. •corresponding author ( e-mail: [email protected]). Received 29 May 1996; accepted 26 December 1996. The successful expression of animal or human virus epitopes on the surface of plant viruses has recently been demonstrated. These chimeric virus particles (CVPs) could represent a cost-effective and safe alternative to conventional animal cell-based vaccines. We report the insertion of oligonucleotides coding for a short linear epitope from the VP2 capsid protein of mink enteritis virus (MEV) into an infec tious cDNA clone of cowpea mosaic virus and the successful expression of the epitope on the surface of CVPs when propagated in the black-eyed bean, Vigna unguiculata. The efficacy of the CVPs was estab lished by the demonstration that one subcutaneous injection of 1 mg of the CVPs in mink conferred pro tection against clinical disease and virtually abolished shedding of virus after challenge with virulent MEV, demonstrating the potential utility of plant CVPs as the basis for vaccine development. -
Carnivore Protoparvovirus 1 Nonstructural Protein 1 (NS1) Gene
Techne ® qPCR test Carnivore protoparvovirus 1 Nonstructural protein 1 (NS1) gene 150 tests For general laboratory and research use only Quantification of Carnivore protoparvovirus 1 genomes. 1 Advanced kit handbook HB10.03.07 Introduction to Carnivore protoparvovirus 1 Carnivore Protoparvovirus 1 is a genus in the virus family Parvoviridae, one of eight genera that contain viruses which infect vertebrate hosts and together make up the subfamily Parvovirinae. The conserved Nonstructural protein 1 (NS1) gene is the target for this genesig® detection kit. Carnivore protoparvovirus 1 is a small, linear, single-stranded DNA virus, with an icosahedral capsid that is non enveloped. The genome ranges from 4-6kb and as 2 open reading frames. 5’ ORF encodes 2 nonstructural proteins (NS1 & NS2) and the 3’ ORF encodes the capsid proteins. Five species are currently recognised, and most of these contain several different named viruses, virus strains, genotypes or serotypes. Due to the wide variety of types available, there are 4 species which prevalence is relatively high and are defined by the encoding for a particular replication protein, NS1 which is at least 85% identical to the protein encoded by other members of the species. Recognised species in genus Protoparvovirus include: Carnivore protoparvovirus 1 (includes canine arvovirus & feline parvovirus) Primate protoparvovirus 1 Rodent protoparvovirus Rodent protoparvovirus 2 (rat parvovirus 1) Ungulate parvovirus 1 (porcine parvovirus) Another virus in this group - Tusavirus 1 - has been reported from humans from Tunisia, Finland, Bhutan and Burkina Faso. Generalised symptoms are lethargy, vomiting, loss of appetite and diarrhoea which can cause dehydration. Carnivore protoparvovirus 1 in cats is known as Feline parvovirus (FPV) and can cause enteritis, panleukopnia and cerebellar ataxia in cats.Carnivore protoparvovirus 1 in dogs is called Canine parvovirus (CPV), can cause intestinal and lifelong cardiac disease in dogs. -
The Emergence of Parvoviruses of Carnivores Karin Hoelzer, Colin R
The emergence of parvoviruses of carnivores Karin Hoelzer, Colin R. Parrish To cite this version: Karin Hoelzer, Colin R. Parrish. The emergence of parvoviruses of carnivores. Veterinary Research, BioMed Central, 2010, 41 (6), 10.1051/vetres/2010011. hal-00903177 HAL Id: hal-00903177 https://hal.archives-ouvertes.fr/hal-00903177 Submitted on 1 Jan 2010 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Vet. Res. (2010) 41:39 www.vetres.org DOI: 10.1051/vetres/2010011 Ó INRA, EDP Sciences, 2010 Review article The emergence of parvoviruses of carnivores Karin HOELZER, Colin R. PARRISH* Baker Institute for Animal Health, Department of Microbiology and Immunology, Cornell University, College of Veterinary Medicine, Hungerford Hill Road, Ithaca, NY 14853, USA (Received 11 November 2009; accepted 10 February 2010) Abstract – The emergence of canine parvovirus (CPV) represents a well-documented example highlighting the emergence of a new virus through cross-species transmission. CPV emerged in the mid-1970s as a new pathogen of dogs and has since become endemic in the global dog population. Despite widespread vaccination, CPV has remained a widespread disease of dogs, and new genetic and antigenic variants have arisen and sometimes reached high frequency in certain geographic regions or throughout the world.