Characteristics of Meiofauna in Extreme Marine Ecosystems: a Review
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Thureborn Et Al 2013
http://www.diva-portal.org This is the published version of a paper published in PLoS ONE. Citation for the original published paper (version of record): Thureborn, P., Lundin, D., Plathan, J., Poole, A., Sjöberg, B. et al. (2013) A Metagenomics Transect into the Deepest Point of the Baltic Sea Reveals Clear Stratification of Microbial Functional Capacities. PLoS ONE, 8(9): e74983 http://dx.doi.org/10.1371/journal.pone.0074983 Access to the published version may require subscription. N.B. When citing this work, cite the original published paper. Permanent link to this version: http://urn.kb.se/resolve?urn=urn:nbn:se:sh:diva-20021 A Metagenomics Transect into the Deepest Point of the Baltic Sea Reveals Clear Stratification of Microbial Functional Capacities Petter Thureborn1,2*., Daniel Lundin1,3,4., Josefin Plathan2., Anthony M. Poole2,5, Britt-Marie Sjo¨ berg2,4, Sara Sjo¨ ling1 1 School of Natural Sciences and Environmental Studies, So¨derto¨rn University, Huddinge, Sweden, 2 Department of Molecular Biology and Functional Genomics, Stockholm University, Stockholm, Sweden, 3 Science for Life Laboratories, Royal Institute of Technology, Solna, Sweden, 4 Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden, 5 School of Biological Sciences, University of Canterbury, Christchurch, New Zealand Abstract The Baltic Sea is characterized by hyposaline surface waters, hypoxic and anoxic deep waters and sediments. These conditions, which in turn lead to a steep oxygen gradient, are particularly evident at Landsort Deep in the Baltic Proper. Given these substantial differences in environmental parameters at Landsort Deep, we performed a metagenomic census spanning surface to sediment to establish whether the microbial communities at this site are as stratified as the physical environment. -
First Molecular Data and Morphological Re-Description of Two
Journal of King Saud University – Science 33 (2021) 101290 Contents lists available at ScienceDirect Journal of King Saud University – Science journal homepage: www.sciencedirect.com Original article First molecular data and morphological re-description of two copepod species, Hatschekia sargi and Hatschekia leptoscari, as parasites on Parupeneus rubescens in the Arabian Gulf ⇑ Saleh Al-Quraishy a, , Mohamed A. Dkhil a,b, Nawal Al-Hoshani a, Wejdan Alhafidh a, Rewaida Abdel-Gaber a,c a Zoology Department, College of Science, King Saud University, Riyadh, Saudi Arabia b Department of Zoology and Entomology, Faculty of Science, Helwan University, Cairo, Egypt c Zoology Department, Faculty of Science, Cairo University, Cairo, Egypt article info abstract Article history: Little information is available about the biodiversity of parasitic copepods in the Arabian Gulf. The pre- Received 6 September 2020 sent study aimed to provide new information about different parasitic copepods gathered from Revised 30 November 2020 Parupeneus rubescens caught in the Arabian Gulf (Saudi Arabia). Copepods collected from the infected fish Accepted 9 December 2020 were studied using light microscopy and scanning electron microscopy and then examined using stan- dard staining and measuring techniques. Phylogenetic analyses were conducted based on the partial 28S rRNA gene sequences from other copepod species retrieved from GenBank. Two copepod species, Keywords: Hatschekia sargi Brian, 1902 and Hatschekia leptoscari Yamaguti, 1939, were identified as naturally 28S rRNA gene infected the gills of fish. Here we present a phylogenetic analysis of the recovered copepod species to con- Arabian Gulf Hatschekiidae firm their taxonomic position in the Hatschekiidae family within Siphonostomatoida and suggest the Marine fish monophyletic origin this family. -
Biogeographic Atlas of the Southern Ocean
Census of Antarctic Marine Life SCAR-Marine Biodiversity Information Network BIOGEOGRAPHIC ATLAS OF THE SOUTHERN OCEAN CHAPTER 5.3. ANTARCTIC FREE-LIVING MARINE NEMATODES. Ingels J., Hauquier F., Raes M., Vanreusel A., 2014. In: De Broyer C., Koubbi P., Griffiths H.J., Raymond B., Udekem d’Acoz C. d’, et al. (eds.). Biogeographic Atlas of the Southern Ocean. Scientific Committee on Antarctic Research, Cambridge, pp. 83-87. EDITED BY: Claude DE BROYER & Philippe KOUBBI (chief editors) with Huw GRIFFITHS, Ben RAYMOND, Cédric d’UDEKEM d’ACOZ, Anton VAN DE PUTTE, Bruno DANIS, Bruno DAVID, Susie GRANT, Julian GUTT, Christoph HELD, Graham HOSIE, Falk HUETTMANN, Alexandra POST & Yan ROPERT-COUDERT SCIENTIFIC COMMITTEE ON ANTARCTIC RESEARCH THE BIOGEOGRAPHIC ATLAS OF THE SOUTHERN OCEAN The “Biogeographic Atlas of the Southern Ocean” is a legacy of the International Polar Year 2007-2009 (www.ipy.org) and of the Census of Marine Life 2000-2010 (www.coml.org), contributed by the Census of Antarctic Marine Life (www.caml.aq) and the SCAR Marine Biodiversity Information Network (www.scarmarbin.be; www.biodiversity.aq). The “Biogeographic Atlas” is a contribution to the SCAR programmes Ant-ECO (State of the Antarctic Ecosystem) and AnT-ERA (Antarctic Thresholds- Ecosys- tem Resilience and Adaptation) (www.scar.org/science-themes/ecosystems). Edited by: Claude De Broyer (Royal Belgian Institute of Natural Sciences, Brussels) Philippe Koubbi (Université Pierre et Marie Curie, Paris) Huw Griffiths (British Antarctic Survey, Cambridge) Ben Raymond (Australian -
A Dolomitization Event at the Oceanic Chemocline During the Permian-Triassic Transition Mingtao Li1, Haijun Song1*, Thomas J
https://doi.org/10.1130/G45479.1 Manuscript received 11 August 2018 Revised manuscript received 4 October 2018 Manuscript accepted 5 October 2018 © 2018 The Authors. Gold Open Access: This paper is published under the terms of the CC-BY license. Published online 23 October 2018 A dolomitization event at the oceanic chemocline during the Permian-Triassic transition Mingtao Li1, Haijun Song1*, Thomas J. Algeo1,2,3, Paul B. Wignall4, Xu Dai1, and Adam D. Woods5 1State Key Laboratory of Biogeology and Environmental Geology, School of Earth Science, China University of Geosciences, Wuhan 430074, China 2State Key Laboratory of Geological Processes and Mineral Resources, School of Earth Science, China University of Geosciences, Wuhan 430074, China 3Department of Geology, University of Cincinnati, Cincinnati, Ohio 45221-0013, USA 4School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK 5Department of Geological Sciences, California State University, Fullerton, California 92834-6850, USA ABSTRACT in dolomite in the uppermost Permian–lowermost Triassic was first noted The Permian-Triassic boundary (PTB) crisis caused major short- by Wignall and Twitchett (2002) and has been attributed to an increased term perturbations in ocean chemistry, as recorded by the precipita- weathering flux of Mg-bearing clays to the ocean (Algeo et al., 2011). tion of anachronistic carbonates. Here, we document for the first time Here, we examine the distribution of dolomite in 22 PTB sections, docu- a global dolomitization event during the Permian-Triassic transition menting a global dolomitization event and identifying additional controls based on Mg/(Mg + Ca) data from 22 sections with a global distri- on its formation during the Permian-Triassic transition. -
Tardigrada, Arthrotardigrada)
Bull. Mus. nam. Hist. nal.. Paris, 4e sér.. 11, 1989, section A, n" 3 : 571-592. Espèces nouvelles de Florarctinae de l'Atlantique Nord-Est et du Pacifique Sud (Tardigrada, Arthrotardigrada) par Jeanne RENAUD-MORNANT Résumé. — Description de quatre espèces nouvelles de Florarctinae (Arthrotardigrada) : Wingslran- darctus crypticus n. sp.. Florarctus asper n. sp. de Nouvelle-Calédonie; Fi stellatus n. sp. des îles de la Société (Polynésie) ; FI. acer n. sp. de l'Atlantique Nord-Est (France). La description originale de W. intermedins (Renaud-Mornant, 1967) est complétée. Les tendances évolutives sont discutées au sein de la sous-famille des Florarctinae. Abstract. — Four new Florarctinae are described : Wingstrandarclus crypticus n. sp., Florarctus asper n. sp. from New Caledonia; FI. stellatus n. sp. from Society Islands (Polynesia); FI. acer n. sp. from NE Atlantic coast of France. W. in ter médius (Renaud-Mornant, 1967) original description is supplemen- ted. Evolutionary trends in the Florarctinae subfamily are discussed. J. RENALD-MORNANT, Museum national d'Histoire naturelle. UA 699 CNRS. Biologìe des Invertébrés marins, 57, rue Cuvier, F-75231 Paris cedex 05. INTRODUCTION Les récoltes de méiofaune effectuées par B. THOMASSIN en Nouvelle-Calédonie, J. GRELET à Moorea (Polynésie) et R. M. KRISTENSEN à Roscoff (Manche) ont permis l'étude de diverses formes littorales de Florarctinae. Des travaux récents (RENAUD-MORNANT, 1982; KRISTENSEN, 1984) sur de nouveaux genres laissaient présager une grande diversité dans cette sous-famille. L'examen approfondi de certaines espèces réputées cosmopolites a déjà révélé des différences morphologiques permettant de séparer des espèces nouvelles (RENAUD-MORNANT, 1987). Les variants étudiés ici illustrent des phénomènes de spéciation vraisemblablement liés à l'allopatrisme et révèlent le potentiel évolutif des Florarctinae. -
Three New Genera and Species of Siphonostomatoid Copepods (Crustacea) Associated with Sponges from Samar Island in the Philippines, with a Proposal of a New Family
Anim. Syst. Evol. Divers. Vol. 34, No. 2: 79-91, April 2018 https://doi.org/10.5635/ASED.2018.34.2.008 Review article Three New Genera and Species of Siphonostomatoid Copepods (Crustacea) Associated with Sponges from Samar Island in the Philippines, with a Proposal of a New Family Jimin Lee1, Il-Hoi Kim2,* 1Marine Ecosystem and Biological Research Center, Korea Institute of Ocean Science & Technology, Busan 49111, Korea 2Korea Institute of Coastal Ecology, Bucheon 14449, Korea ABSTRACT Three new genera and species of siphonostomatoid copepods are described as associates of sponges from shallow water of Samar Island in the Philippines: Samarus filipes n. gen., n. sp., Paurocheres dentatus n. gen., n. sp., and Platymyzon umbonatum n. gen., n. sp. A new family Samarusidae is proposed to accommodate Samarus n. gen. which has rudimentary legs 1-5 represented only by filiform setae. Paurocheres n. gen. is characterized by 2-segmented endopod of leg 4 and reduced setation of legs, and Platymyzon n. gen. by missing of mandibular gnathobase. Keywords: Samarusidae n. fam., three new genera, Samarus, Paurocheres, Platymyzon, sponge hosts INTRODUCTION MATERIALS AND METHODS Siphonostomatoid copepods associated with invertebrates Studied copepod material was obtained from washings of are small copepod, mostly less than 2 mm in length (Humes, mixed species of sponges. These sponge hosts were collected 1997a). Although sponges in the tropical Indo-Pacific har- by SCUBA divers of KIOST in the depth of 15-25 m on Feb- bor numerous siphonostomatoid copepods (Humes, 1996), ruary 24, 2017. For microscopic study selected copepod spe- perhaps Lee and Kim (2017) was the only record on the co- cimens were dissected in lactic acid and observed using the pepods associated with sponges from the Philippines. -
Bellec Et Al.5)
Chemosynthetic ectosymbionts associated with a shallow-water marine nematode Laure Bellec, Marie-Anne Cambon Bonavita, Stéphane Hourdez, Mohamed Jebbar, Aurélie Tasiemski, Lucile Durand, Nicolas Gayet, Daniela Zeppilli To cite this version: Laure Bellec, Marie-Anne Cambon Bonavita, Stéphane Hourdez, Mohamed Jebbar, Aurélie Tasiemski, et al.. Chemosynthetic ectosymbionts associated with a shallow-water marine nematode. Scientific Reports, Nature Publishing Group, 2019, 9 (1), 10.1038/s41598-019-43517-8. hal-02265357 HAL Id: hal-02265357 https://hal.archives-ouvertes.fr/hal-02265357 Submitted on 9 Aug 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. www.nature.com/scientificreports OPEN Chemosynthetic ectosymbionts associated with a shallow-water marine nematode Received: 30 October 2018 Laure Bellec1,2,3,4, Marie-Anne Cambon Bonavita2,3,4, Stéphane Hourdez5,6, Mohamed Jebbar 3,4, Accepted: 2 April 2019 Aurélie Tasiemski 7, Lucile Durand2,3,4, Nicolas Gayet1 & Daniela Zeppilli1 Published: xx xx xxxx Prokaryotes and free-living nematodes are both very abundant and co-occur in marine environments, but little is known about their possible association. Our objective was to characterize the microbiome of a neglected but ecologically important group of free-living benthic nematodes of the Oncholaimidae family. -
Molecular Diversity, Phylogeny, and Biogeographic Patterns of Crustacean Copepods Associated with Scleractinian Corals of the Indo-Pacific
Molecular Diversity, Phylogeny, and Biogeographic Patterns of Crustacean Copepods Associated with Scleractinian Corals of the Indo-Pacific Dissertation by Sofya Mudrova In Partial Fulfillment of the Requirements For the Degree of Doctor of Philosophy of Science King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia November, 2018 2 EXAMINATION COMMITTEE PAGE The dissertation of Sofya Mudrova is approved by the examination committee. Committee Chairperson: Dr. Michael Lee Berumen Committee Co-Chair: Dr. Viatcheslav Ivanenko Committee Members: Dr. James Davis Reimer, Dr. Takashi Gojobori, Dr. Manuel Aranda Lastra 3 COPYRIGHT PAGE © November, 2018 Sofya Mudrova All rights reserved 4 ABSTRACT Molecular diversity, phylogeny and biogeographic patterns of crustacean copepods associated with scleractinian corals of the Indo-Pacific Sofya Mudrova Biodiversity of coral reefs is higher than in any other marine ecosystem, and significant research has focused on studying coral taxonomy, physiology, ecology, and coral-associated fauna. Yet little is known about symbiotic copepods, abundant and numerous microscopic crustaceans inhabiting almost every living coral colony. In this thesis, I investigate the genetic diversity of different groups of copepods associated with reef-building corals in distinct parts of the Indo-Pacific; determine species boundaries; and reveal patterns of biogeography, endemism, and host-specificity in these symbiotic systems. A non-destructive method of DNA extraction allowed me to use an integrated approach to conduct a diversity assessment of different groups of copepods and to determine species boundaries using molecular and taxonomical methods. Overall, for this thesis, I processed and analyzed 1850 copepod specimens, representing 269 MOTUs collected from 125 colonies of 43 species of scleractinian corals from 11 locations in the Indo-Pacific. -
Further Studies on the Marine Tardigrade Fauna from Sardinia (Italy)
G. Pilato and L. Rebecchi (Guest Editors) Proceedings of the Tenth International Symposium on Tardigrada J. Limnol., 66(Suppl. 1): 56-59, 2007 Further studies on the marine tardigrade fauna from Sardinia (Italy) Rossana D'ADDABBO, Maria GALLO*, Cristiana DE LEONARDIS, Roberto SANDULLI and Susanna DE ZIO GRIMALDI Zoology Department, University of Bari, Via Orabona 4, 70125 Bari, Italy *e-mail corresponding author: [email protected] ABSTRACT An investigation on the taxonomy and ecology of marine tardigrades was carried out in different intertidal and subtidal sites along the coasts of Sardinia (Italy). Particle size analysis of sediments revealed medium or medium-fine intertidal sands and coarse subtidal sands, the latter mainly formed by coralligenous debris. The systematic study was particularly relevant, leading to the identification of 25 species, of which 9 are new records for Sardinia, and 2 are new to science. With these new findings, the total number of species for Sardinia adds up to 47. The species found belong to the families Halechiniscidae (16 species; abundance 2 to 263 ind. 10 cm-2), Batillipedidae (6 species; abundance 2 to 574 ind. 10 cm-2) and Stygarctidae (3 species; abundance 0 to 13 ind. 10 cm-2). The present data confirm the existence of a remarkable diversity, both of intertidal and subtidal tardigrade fauna. Generally, the prevalently siliceous intertidal sands host a few number of species (sometimes with many individuals), while the subtidal sediments, which were mainly calcareous, show a higher number of species often with low density. In fact, in the intertidal sediments only 11 species were found, 5 belonging to Halechiniscidae and 6 to Batillipedidae. -
Psammolittoral Marine Tardigrades from North Carolina and Their Conformity to Worldwide Zonation Patterns
PSAMMOLITTORAL MARINE TARDIGRADES FROM NORTH CAROLINA AND THEIR CONFORMITY TO WORLDWIDE ZONATION PATTERNS by Eric W . Lindgren Department of Zoology, University of North Carolina, Chapel Hill and Institute of Marine Sciences, Morehead City, N.C., U.S.A. Résumé Cinq espèces de Tardigrades, Batillipes minis, B. bullacaudatus, Stygarctus bradypus, S. granulatus, et Tanarctus arborspinosus nov. spec., sont signalés des sables de la zone intertidale de Bogue Bank, Caroline du Nord. La nouvelle espèce est caractérisée par la présence d’un cirre médian et par des épines latéro-posté- rieures très longues avec plusieurs branches secondaires et de nombreuses épines tertiaires plus petites. La répartition de chaque espèce a été étudiée en rapport avec les caractéristiques écologiques de cette plage. Introduction Marine Tardigrada are occasionally an abundant component of the meiofauna and recently have been the object of increased ecolo gical and systematic attention. A majority of the species thus far reported are inhabitants of the interstitial spaces on sandy beaches, and their ecology has been studied on the west Atlantic coast (McGinty and Higgins, 1968; Pollock, 1970a), the east Atlantic coast in France (Renaud-Debyser, 1956, 1959a, 1963) and Germany (Schmidt, 1968, 1969), the Adriatic coast of Italy (DeZio, 1964, 1965; DeZio and Grimaldi, 1964a & b, 1966), and the Waltair coast of India (Rao and Ganapati, 1968). Marine tardigrade systematics and ecology is reviewed by Renaud-Mornant and Pollock (1971). Other references have been largely taxonomic surveys or descriptions concerning the thirty-four known marine species. In the present study the interstitial meiofauna of a sandy North Carolina beach was examined on the ocean side of Rogue Bank (76° 50’ 00” W, 34° 41’ 30” N). -
Extreme Secondary Sexual Dimorphism in the Genus Florarctus
Extreme secondary sexual dimorphism in the genus Florarctus (Heterotardigrada Halechiniscidae) Gasiorek, Piotr; Kristensen, David Mobjerg; Kristensen, Reinhardt Mobjerg Published in: Marine Biodiversity DOI: 10.1007/s12526-021-01183-y Publication date: 2021 Document version Publisher's PDF, also known as Version of record Document license: CC BY Citation for published version (APA): Gasiorek, P., Kristensen, D. M., & Kristensen, R. M. (2021). Extreme secondary sexual dimorphism in the genus Florarctus (Heterotardigrada: Halechiniscidae). Marine Biodiversity, 51(3), [52]. https://doi.org/10.1007/s12526- 021-01183-y Download date: 29. sep.. 2021 Marine Biodiversity (2021) 51:52 https://doi.org/10.1007/s12526-021-01183-y ORIGINAL PAPER Extreme secondary sexual dimorphism in the genus Florarctus (Heterotardigrada: Halechiniscidae) Piotr Gąsiorek1 & David Møbjerg Kristensen2,3 & Reinhardt Møbjerg Kristensen4 Received: 14 October 2020 /Revised: 3 March 2021 /Accepted: 15 March 2021 # The Author(s) 2021 Abstract Secondary sexual dimorphism in florarctin tardigrades is a well-known phenomenon. Males are usually smaller than females, and primary clavae are relatively longer in the former. A new species Florarctus bellahelenae, collected from subtidal coralline sand just behind the reef fringe of Long Island, Chesterfield Reefs (Pacific Ocean), exhibits extreme secondary dimorphism. Males have developed primary clavae that are much thicker and three times longer than those present in females. Furthermore, the male primary clavae have an accordion-like outer structure, whereas primary clavae are smooth in females. Other species of Florarctus Delamare-Deboutteville & Renaud-Mornant, 1965 inhabiting the Pacific Ocean were investigated. Males are typically smaller than females, but males of Florarctus heimi Delamare-Deboutteville & Renaud-Mornant, 1965 and females of Florarctus cervinus Renaud-Mornant, 1987 have never been recorded. -
The Deep Sea Elements of the Faroe Bank Tardigrade Fauna with a Description of Two New Species
G. Pilato and L. Rebecchi (Guest Editors) Proceedings of the Tenth International Symposium on Tardigrada J. Limnol., 66(Suppl. 1): 12-20, 2007 The deep sea elements of the Faroe Bank tardigrade fauna with a description of two new species Jesper GULDBERG HANSEN Department of Invertebrate Zoology, Zoological Museum, University of Copenhagen, Universitetsparken 15, DK-2100 Copenhagen, Denmark e-mail: [email protected] ABSTRACT Two new marine Tardigrada species are described from the calcareous sediments at the steep slope of the Faroe Bank in the North Atlantic Ocean. Parmursa torquata sp. nov. can be distinguished mainly by small cylindrical secondary clavae, and the presence of caudal and cephalic vesicles, and a large ventral plate. Coronarctus verrucatus sp. nov. is characterised by its unique cuticular sculpture, with numerous small wart-like excrescences, regularly distributed all over the body. These new records from the relatively shallow water of the Faroe Bank (200-260 m) further widen the range of Parmursa and Coronarctus distribution and diversity, especially regarding the genus Parmursa, which to date has remained monospecific. Key words: Tardigrada, Arthrotardigrada, Faroe Bank, Parmursa torquata sp. nov, Coronarctus verrucatus sp. nov. ethanol and acetone prior to critical point drying. The 1. INTRODUCTION dehydrated specimens were then mounted on aluminium stubs, coated with gold and observed in a JEOL JSM- Although deep-sea tardigrades have been known 840 scanning electron microscope. The type-material is since the mid-1960's, the published information is deposited in the collections of the Zoological Museum, scattered and data about their worldwide distribution are Copenhagen (ZMUC), Denmark.