HTG Data Input: Annotation File Output in DDBJ Flat File
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HTG data Input: Annotation file Output in DDBJ flat file LOCUS ############ 123456 bp DNA linear HTG 30-SEP-2017 Entry Feature Location Qualifier Value DEFINITION Arabidopsis thaliana DNA, BAC clone: CIC5D1, chromosome 1, *** COMMON DATE hold_date 20191130 SEQUENCING IN PROGRESS *** SUBMITTER contact Hanako Mishima ACCESSION ############ ab_name Mishima,H. VERSION ############.1 ab_name Yamada,T. DBLINK ab_name Park,C.S. KEYWORDS HTG; HTGS_PHASE1. ab_name Liu,G.Q. SOURCE Arabidopsis thaliana (thale cress) email [email protected] ORGANISM Arabidopsis thaliana phone 81-55-981-6853 Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; fax 81-55-981-6849 Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; institute National Institute of Genetics rosids; malvids; Brassicales; Brassicaceae; Camelineae; department DNA Data Bank of Japan Arabidopsis. country Japan REFERENCE 1 (bases 1 to 123456) state Shizuoka AUTHORS Mishima,H., ada,T., Park,C.S. and Liu,G.Q. city Mishima TITLE Direct Submission street Yata 1111 JOURNAL Submitted (dd-mmm-yyyy) to the DDBJ/EMBL/GenBank databases. zip 411-8540 Contact:Hanako Mishima REFERENCE ab_name Mishima,H. National Institute of Genetics, DNA Data Bank of Japan; Yata 1111, ab_name Yamada,T. Mishima, Shizuoka 411-8540, Japan ab_name Park,C.S. REFERENCE 2 ab_name Liu,G.Q. AUTHORS Mishima,H., ada,T., Park,C.S. and Liu,G.Q. title Arabidopsis thaliana DNA TITLE Arabidopsis thaliana Sequencing year 2017 JOURNAL Unpublished (2017) status Unpublished COMMENT Please visit our web site email [email protected] URL:http://www.ddbj.nig.ac.jp/ phone 81-55-981-6853 FEATURES Location/Qualifiers fax 81-55-981-6849 source 1..123456 phext 3207 /chromosome="1" DIVISION division HTG /clone="CIC6D5" KEYWORD keyword HTG /clone_lib="AT01 BAC" keyword HTGS_PHASE1 /ecotype="columbia" COMMENT line Please visit our web site /mol_type="genomic DNA" line URL; http://ddbj.nig.ac.jp /organism="Arabidopsis thaliana" ENT001 source 1..E clone CIC5D1 assembly_gap 5001..5100 clone_lib AT01 BAC /estimated_length="unknown" organism Arabidopsis thaliana /gap_type="within scaffold" mol_type genomic DNA /linkage_evidence="within clone" chromosome 1 assembly_gap 24001..24100 ecotype columbia /estimated_length="unknown" @@[organism]@@ DNA, BAC clone: @@[clone]@@, ff_definition chromosome @@[chromosome]@@, *** SEQUENCING IN /gap_type="within scaffold" PROGRESS *** assembly_gap 5001..5100 estimated_length unknown /linkage_evidence="within clone" gap_type within scaffold assembly_gap 62001..62100 linkage_evidence within clone /estimated_length="unknown" assembly_gap 24001..24100 estimated_length unknown /gap_type="within scaffold" gap_type within scaffold /linkage_evidence="within clone" linkage_evidence within clone assembly_gap 105001..105100 assembly_gap 62001..62100 estimated_length unknown /estimated_length="unknown" gap_type within scaffold /gap_type="within scaffold" linkage_evidence within clone /linkage_evidence="within clone" assembly_gap 105001..105100 estimated_length unknown <The lines for BASE COUNT, ORIGIN, and nucleotide sequence are omitted> gap_type within scaffold // linkage_evidence within clone.