Considerations and Consequences of Allowing DNA Sequence Data As Types of Fungal Taxa
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BGBM Annual Report 2017–2019
NETWORKING FOR DIVERSITY Annual Report 2017 – 2019 2017 – BGBM BGBM Annual Report 2017 – 2019 Cover image: Research into global biodiversity and its significance for humanity is impossible without networks. The topic of networking can be understood in different ways: in the natural world, with the life processes within an organism – visible in the network of the veins of a leaf or in the genetic diversity in populations of plants – networking takes place by means of pollen, via pollinators or the wind. In the world of research, individual objects, such as a particular plant, are networked with the data obtained from them. Networking is also crucial if this data is to be effective as a knowledge base for solving global issues of the future: collaboration between scientific experts within and across disciplines and with stakeholders at regional, national and international level. Contents Foreword 5 Organisation 56 A network for plants 6 Facts and figures 57 Staff, visiting scientists, doctoral students 57 Key events of 2017 – 2019 10 Affiliated and unsalaried scientists, volunteers 58 BGBM publications 59 When diversity goes online 16 Species newly described by BGBM authors 78 Families and genera newly described by BGBM authors 82 On the quest for diversity 20 Online resources and databases 83 Externally funded projects 87 Invisible diversity 24 Hosted scientific events 2017 – 2019 92 Collections 93 Humboldt 2.0 30 Library 96 BGBM Press: publications 97 Between East and West 36 Botanical Museum 99 Press and public relations 101 At the service of science 40 Visitor numbers 102 Budget 103 A research museum 44 Publication information 104 Hands-on science 50 Our symbol, the corncockle 52 4 5 Foreword BGBM Annual Report 2017 – 2019 We are facing vital challenges. -
Australasian Lichenology Number 56, January 2005
Australasian Lichenology Number 56, January 2005 Australasian Lichenology Number 56, January 2005 ISSN 1328-4401 The Austral Pannaria immixta c.olonizes rock, bark, and occasionally bryophytes in both shaded and well-lit humid lowlands. Its two most distinctive traits are its squamulose thallus and its gyrose apothecial discs. 1 mm c:::::===- CONTENTS NEWS Kantvilas, ~ack Elix awarded the Acharius medal at IAL5 2 BOOK REVIEW Galloway, DJ-The Lichen Hunters, by Oliver Gilbert (2004) 4 RECENT LITERATURE ON AUSTRALASIAN LICHENS 7 ADDITIONAL LICHEN RECORDS FROM AUSTRALIA Elix, JA; Lumbsch, HT (55)-Diploschistes conception is 8 ARTICLES Archer, AW-Australian species in the genus Diorygma (Graphidaceae) ....... 10 Elix, JA; Blanco, 0; Crespo, A-A new species of Flauoparmelia (Parmeliaceae, lichenized Ascomycota) from Western Australia ...... .... ............................ ...... 12 Galloway, DJ; Sancho, LG-Umbilicaria murihikuana and U. robusta (Umbili cariaceae: Ascomycota), two new taxa from Aotearoa New Zealand .. ... .. ..... 16 Elix, JA; Bawingan, PA; Lardizaval, M; Schumm, F-Anew species ofMenegazzia (Parmeliaceae, lichenized Ascomycota) and new records of Parmeliaceae from Papua New Guinea and the Philippines .................................. .. .................... 20 Malcolm, WM-'ITansfer ofDimerella rubrifusca to Coenogonium ........ ......... 25 Johnson, PN- Lichen succession near Arthur's Pass, New Zealand ............... 26 NEWS JACK ELIXAWARDED THE ACHARIUS MEDALAT IAL5 The recent Fifth Conference of the International Association for Lichenology (1AL5) in Tartu, Estonia, was a highly successful event, and most Australasian lichenologists will have the opportunity to read of its various academic achieve ments in other media*. The social programme included the traditionallAL Din ner, where, after many days of symposia, poster sessions, excursions, meetings and other lichenological events, conference delegates mingle informally and dust away their weariness over food and drink. -
Spec. Rpt. Front Matter
SPECIAL REPORT T HE THE LICHENS OF L ICHENS OF BRITISH COLUMBIA 1999 Illustrated Keys Part 2 — Fruticose Species by Trevor Goward B RITISH C OLUMBIA Ministry of Forests Research Program THE LICHENS OF BRITISH COLUMBIA Illustrated Keys Part 2 — Fruticose Species by Trevor Goward (Illustrations by Trevor Goward) Ministry of Forests Research Program Canadian Cataloguing in Publication Data Goward, Trevor The lichens of British Columbia, illustrated keys. Part 2, Fruticose Species (Special report series, ISSN 0843–6452 ; 9) Includes bibliographical references, p. Includes index. ISBN 0–7726–3961–2 1. Lichens – British Columbia – Identification. 2. Lichens – British Columbia – Geographic distribution. I. British Columbia. Ministry of Forests. Research Branch. II. Title. III. Series: Special report series (British Columbia Ministry of Forests) ; 9 QK587.7.B7G68 1999 579.7’09711 C99 – 960259 – 4 Prepared by Trevor Goward Herbarium, Department of Botany University of British Columbia Vancouver, BC Mailing Address: Edgewood Blue, Box 131 Clearwater, BC for B.C. Ministry of Forests Research Branch 712 Yates Street Victoria, BC © 1999 Province of British Columbia Copies of this report may be obtained, depending upon supply, from: Crown Publications 521 Fort Street Victoria, BC (250) 386-4636 www.crownpub.bc.ca For more information on Forestry Division publications, visit our web site at: http://www.for.gov.bc.ca/hfd/pubs/index.htm LICHENS OF BRITISH COLUMBIA, PART 2 – FRUTICOSE SPECIES ii ACKNOWLEDGEMENTS This manual has been four years in the Rydholm tested the keys; Irwin Brodo, making. During that time, it has benefit- François Lutzoni, Eric B. Peterson, and ted from the kindness of many people. -
1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families ⇑ Jolanta Miadlikowska A, , Frank Kauff B,1, Filip Högnabba C, Jeffrey C
Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, Soili Stenroos c,10 a Department of Biology, Duke University, Durham, NC 27708-0338, USA b FB Biologie, Molecular Phylogenetics, 13/276, TU Kaiserslautern, Postfach 3049, 67653 Kaiserslautern, Germany c Botanical Museum, Finnish Museum of Natural History, FI-00014 University of Helsinki, Finland d Department of Ecology and Evolutionary Biology, Yale University, 358 ESC, 21 Sachem Street, New Haven, CT 06511, USA e Institut für Botanik, Karl-Franzens-Universität, Holteigasse 6, A-8010 Graz, Austria f Department of Plant Taxonomy and Nature Conservation, University of Gdan´sk, ul. Wita Stwosza 59, 80-308 Gdan´sk, Poland g Science and Education, The Field Museum, 1400 S. -
One Hundred New Species of Lichenized Fungi: a Signature of Undiscovered Global Diversity
Phytotaxa 18: 1–127 (2011) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Monograph PHYTOTAXA Copyright © 2011 Magnolia Press ISSN 1179-3163 (online edition) PHYTOTAXA 18 One hundred new species of lichenized fungi: a signature of undiscovered global diversity H. THORSTEN LUMBSCH1*, TEUVO AHTI2, SUSANNE ALTERMANN3, GUILLERMO AMO DE PAZ4, ANDRÉ APTROOT5, ULF ARUP6, ALEJANDRINA BÁRCENAS PEÑA7, PAULINA A. BAWINGAN8, MICHEL N. BENATTI9, LUISA BETANCOURT10, CURTIS R. BJÖRK11, KANSRI BOONPRAGOB12, MAARTEN BRAND13, FRANK BUNGARTZ14, MARCELA E. S. CÁCERES15, MEHTMET CANDAN16, JOSÉ LUIS CHAVES17, PHILIPPE CLERC18, RALPH COMMON19, BRIAN J. COPPINS20, ANA CRESPO4, MANUELA DAL-FORNO21, PRADEEP K. DIVAKAR4, MELIZAR V. DUYA22, JOHN A. ELIX23, ARVE ELVEBAKK24, JOHNATHON D. FANKHAUSER25, EDIT FARKAS26, LIDIA ITATÍ FERRARO27, EBERHARD FISCHER28, DAVID J. GALLOWAY29, ESTER GAYA30, MIREIA GIRALT31, TREVOR GOWARD32, MARTIN GRUBE33, JOSEF HAFELLNER33, JESÚS E. HERNÁNDEZ M.34, MARÍA DE LOS ANGELES HERRERA CAMPOS7, KLAUS KALB35, INGVAR KÄRNEFELT6, GINTARAS KANTVILAS36, DOROTHEE KILLMANN28, PAUL KIRIKA37, KERRY KNUDSEN38, HARALD KOMPOSCH39, SERGEY KONDRATYUK40, JAMES D. LAWREY21, ARMIN MANGOLD41, MARCELO P. MARCELLI9, BRUCE MCCUNE42, MARIA INES MESSUTI43, ANDREA MICHLIG27, RICARDO MIRANDA GONZÁLEZ7, BIBIANA MONCADA10, ALIFERETI NAIKATINI44, MATTHEW P. NELSEN1, 45, DAG O. ØVSTEDAL46, ZDENEK PALICE47, KHWANRUAN PAPONG48, SITTIPORN PARNMEN12, SERGIO PÉREZ-ORTEGA4, CHRISTIAN PRINTZEN49, VÍCTOR J. RICO4, EIMY RIVAS PLATA1, 50, JAVIER ROBAYO51, DANIA ROSABAL52, ULRIKE RUPRECHT53, NORIS SALAZAR ALLEN54, LEOPOLDO SANCHO4, LUCIANA SANTOS DE JESUS15, TAMIRES SANTOS VIEIRA15, MATTHIAS SCHULTZ55, MARK R. D. SEAWARD56, EMMANUËL SÉRUSIAUX57, IMKE SCHMITT58, HARRIE J. M. SIPMAN59, MOHAMMAD SOHRABI 2, 60, ULRIK SØCHTING61, MAJBRIT ZEUTHEN SØGAARD61, LAURENS B. SPARRIUS62, ADRIANO SPIELMANN63, TOBY SPRIBILLE33, JUTARAT SUTJARITTURAKAN64, ACHRA THAMMATHAWORN65, ARNE THELL6, GÖRAN THOR66, HOLGER THÜS67, EINAR TIMDAL68, CAMILLE TRUONG18, ROMAN TÜRK69, LOENGRIN UMAÑA TENORIO17, DALIP K. -
Australasian Lichenology Australasian Lichenology Number 45, July 1999 Number 45, July 1999
Australasian Lichenology Australasian Lichenology Number 45, July 1999 Number 45, July 1999 Byssoloma sublmdulatllm lmm Byssoloma subdiscordans lmm ANNOUNCEMENTS Dampier 300, Biodiversity in Australia, Perth, 1999 .................................. ....... 2 14th meeting of Australasian lichenologists, Melbourne, 1999 ......................... 2 4th IAL Symposium, Barcelona, 2000 ..... .. .......................................................... 2 The Southern Connection, Christchurch, 2000 .. ............................ ..................... 3 ADDITIONAL LICHEN RECORDS FROM AUSTRALIA Archer, AW (40}-Pertusaria knightiana MUll. Arg........................................... 4 Elix, JA; Streimann, H (41}-Parmeliaceae. .................................... .. ................ 5 ADDITIONAL LICHEN RECORDS FROM NEW ZEALAND Galloway, DJ; Knight, A; Johnson, PN; Hayward, BW (30)-Polycoccum galli genum .. ............................................................................................................... 8 ARTICLES Lumbsch, HT-Notes on some genera erroneously reported for Australia ........ 10 Elix, JA; McCaffery, LF-Three new tridepsides in the lichenPseudocyphellaria billardierei ................................................................................ .. ................ ..... 12 Trinkaus, U; Mayrhofer, H; Matzer, M-Rinodinagennarii (Physciaceae), a wide spread species in the temperate regions of the Southern Hemisphere ........ 15 Malcolm, WM; Vezda, A; McCarthy, PM; Kantvilas, G-Porina subapplanata, a new species from -
A Multigene Phylogenetic Synthesis for the Class Lecanoromycetes (Ascomycota): 1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families
A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families Miadlikowska, J., Kauff, F., Högnabba, F., Oliver, J. C., Molnár, K., Fraker, E., ... & Stenroos, S. (2014). A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families. Molecular Phylogenetics and Evolution, 79, 132-168. doi:10.1016/j.ympev.2014.04.003 10.1016/j.ympev.2014.04.003 Elsevier Version of Record http://cdss.library.oregonstate.edu/sa-termsofuse Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, -
Josef Hafellner – a Life Amongst Lichens and Their Parasites
Herzogia 29 (2) Teil 1, 2016: 213 –234 213 Josef Hafellner – a life amongst lichens and their parasites Martin Grube, Walter Obermayer*, Helmut Mayrhofer & Toby Spribille Abstract: Grube, M., Obermayer, W., Mayrhofer, H. & Spribille, T. 2016. Josef Hafellner – a life amongst lichens and their parasites. – Herzogia 29: 213 –234. The impact of Josef Hafellners scientific work on the systematics of lichenized ascomycetes and on the knowledge on lichenicolous fungi is discussed and the value of his extensive collections (c. 100,000 lichens including c. 8,000 lichenicolous fungi) is highlighted. A bibliography (1975 –2016) is presented. Zusammenfassung: Grube, M., Obermayer, W., Mayrhofer, H. & Spribille, T. 2016. Josef Hafellner – ein Leben inmitten von Flechten und ihren Parasiten. – Herzogia 29: 213 –234. Der Einfluss von Josef Hafellners wissenschaftlichen Arbeiten auf die Systematik von lichenisierten Ascomyceten und auf die Kenntnis von flechtenbewohnenden Pilzen wird diskutiert und auf den Wert seiner umfangreichen Aufsammlungen (ca. 100.000 Belege, davon ca. 8.000 Belege lichenicole Pilze) hingewiesen. Eine Publikationsliste (von 1975 bis 2016) wird vorgelegt. Key words: Bibliography, eponyms, lichenicolous fungi, European Alps. Introduction Few scientists make such a mark on their science that they can be said to change their field, and fewer still are involved in setting up the framework for an entire branch of natural history. One such person is Josef Hafellner, to whom we dedicate the present contribution. Conscious that he is – notwithstanding his recent retirement – still very much fully active as a researcher, we wish here to highlight his impact on our science to date. Josef Hafellner has dedicated his scientific career to the classification and taxonomy of fungi, in particular lichen-forming asco- mycetes and the fungi inhabiting lichen symbioses (known as lichenicolous fungi). -
Cladonia Islandica (Cladoniaceae, Ascomycota) a Species Newly Discovered in Spain, Alaska and Canada
Botanica Complutensis 38: 25-27. 2014 ISSN: 0214-4565 http://dx.doi.org/10.5209/rev_BOCM.2014.v38.45772 Cladonia islandica (Cladoniaceae, Ascomycota) a species newly discovered in Spain, Alaska and Canada Raquel Pino-Bodas1, Teuvo Ahti1 and Ana Rosa Burgaz2 Abstract: Pino-Bodas, R.; Ahti, T. & Burgaz, A. R. 2014. Cladonia islandica (Cladoniaceae, Ascomycota), a species newly discovered in Spain, Alaska and Canada. Bot. Complut. 38: 25-27. Cladonia islandica is reported as new to Spain (Salamanca) and the exact localities of its known specimens from Alaska (Aleutian Islands, Alaska Peninsula) and Canada (Manitoba, Québec) are given. A brief description is provided. Key words: Cladonia, Lichenized fungi, Spain, Alaska, Canada. Resumen: Pino-Bodas, R.; Ahti, T. & Burgaz, A. R. 2014. Cladonia islandica (Cladoniaceae, Ascomycota), una especie nueva descubierta en España, Alaska y Canada.. Bot. Complut. 38: 25-27. Cladonia islandica se cita por primera vez para España (Salamanca), también se citan para localidades de Alaska (Islas Aleutianas, y la Península de Alaska) y Canada (Manitoba). Se incluye una breve descripción. Palabras clave: Cladonia, hongos liquenizados, España, Alaska, Canada. INTRODUCTION had found new specimens in America, which represent considerable range extensions for this species. Recently, Since the publication of the checklist of the lichenized Ahti & Stenroos (2013) reported Cladonia islandica only fungi of the Iberian Peninsula (Llimona & Hladun 2001), from Iceland and Svalbard, with a brief note that it has the list has got additions every year, with new species and recently been recorded from Canada and Alaska. quotations for the area. In particular, the Cladoniaceae flora on the Iberian Peninsula has been widely studied (Burgaz & Ahti 1992, 1994, 1998, 2009; Burgaz et al. -
AUSTRALASIAN LICHENOLOGY 64, January 2009 AUSTRALASIAN LICHENOLOGY 64, January 2009 Additional Lichen Records from Subantarctica 1
The cosmopolitan Ochrolechia pallescens grows throughout Australia and New Zealand on the bark of forest trees. In the past, species of the genus in Europe were bulk-harvested for the dyeing industry. CONTENTS ADDITIONAL LICHEN RECORDS FROM SUBANTARCTICA Øvstedal, DO; Gremmen, NJM (1). The Kerguelen Islands ........................................ 3 ADDITIONAL LICHEN RECORDS FROM AUSTRALIA Elix, JA; McCarthy, PM; Kantvilas, G (69). Miscellaneous taxa ................................ 10 Aptroot, A (70). Species of Anisomeridium and Mycomicrothelia, with a note on Arthopyrenia ................................................................................................................... 22 ARTICLES Elix, JA—Two new taxa of Thysanothecium (Cladoniaceae, Ascomycota) from Australia ........................................................................................................................ 26 Elix, JA—New crustose lichens (lichenized Ascomycota) from Australia .............. 30 Elix, JA—The chemical diversity of Pseudocyphellaria gilva (lichenized Ascomy- cota) ................................................................................................................................ 38 BOOK REVIEWS Galloway, DJ—Nordic Lichen Flora. Vol. 3 Cyanolichens, by P.M. Jørgensen, and Hongos liquenícolas del Sur de Sudamérica, especialmente de Isla Navarino (Chile) by J. Etayo and L.G. Sancho ........................................................................................ 41 RECENT LITERATURE ON AUSTRALASIAN LICHENS ........................................ -
Finnish Botanists and Mycologists in the Arctic1
525 ARTICLE Finnish botanists and mycologists in the Arctic1 Henry Väre Abstract: Finnish botanists and mycologists have studied Arctic areas and timberline regions since the beginning of the 18th century. Most expeditions to the Kola Peninsula were made between 1800 and 1917 and until 1945 to Lapponia petsamoënsis on the western rim of the Kola Peninsula. Since those years, these areas have been part of the Soviet Union or Russia. Svalbard and Newfoundland and Labrador have been studied repeatedly as well, Svalbard since the 1860s and Newfoundland and Labrador since the 1930s. This article focus- es on Finnish collections. These are deposited in the herbaria of Helsinki, Turku, and Oulu universities, except materials from the Nordenskiöld expeditions, which were mainly deposited in Stockholm. Concerning the Kola Peninsula, collections at Helsinki are the most extensive. The exact number of specimens is not known, but by rough estimation, the number is about 60 000, with an additional 110 000 observations included in the data- base. These expeditions have provided material to describe 305 new taxa to science, viz. 47 algae, 78 bryophytes, 25 fungi, 136 lichens, and 19 vascular plants. This number is an underestimate, as many new species have been described in several separate taxonomic arti- cles. At least 63 persons have contributed to making these collections to Finnish herbaria. Of those, 52 are of Finnish nationality. Key words: bryophytes, fungi, vascularplants, Finnish, Arctic. Résumé : Les botanistes et les mycologues finlandais ont étudié les régions arctiques et les régions de limite forestière depuis le début du 18ème siècle. La plupart des expéditions à la presqu’île de Kola ont été faites entre 1800 et 1917 et jusqu'à 1945 à Lapponia petsamoënsis For personal use only. -
Finnish Botanists on the Kola Peninsula (Russia) up to 1918
Memoranda Soc. Soc. Fauna Fauna Flora Flora Fennica Fennica 89, 89: 2013 75–104. • Uotila 2013 75 Finnish botanists on the Kola Peninsula (Russia) up to 1918 Pertti Uotila Uotila, P., Finnish Museum of Natural History (Botany), P.O.Box 7, FI-00014 University of Helsinki, Finland. E-mail: [email protected] Finnish botanists actively studied the flora of Karelia (Karelian Republic) and the Kola Peninsula (Murmansk Region) when Finland was a Grand Duchy of Russia in 1809–1918. J. Fellman’s ex- peditions in 1829 were the first notable botanical expeditions to the area. Geologically and floristi- cally the area was similar to Finland, and exploring the area was considered to be a national duty for Finnish biologists. Almost 40 Finnish scientists who travelled on the Kola Peninsula collected significant amounts of herbarium specimens from there. The specimens are mostly in H, but du- plicates were distributed widely. The collectors include M. Aschan, W. M. Axelson (Linnaniemi), V. Borg (Kivilinna), M. Brenner, V. F. Brotherus, R. Envald, J. Fellman, N. I. Fellman, C. W. Fontell, E. af Hällström, H. Hollmén, P. A. Karsten, A. Osw. Kihlman (Kairamo), F. W. Klingstedt, H. Lindberg, J. Lindén, A. J. Malmberg (Mela), J. Montell, F. Nylander, J. A. Palmén, V. Pesola, P. A. Rantaniemi, J. Sahlberg, and G. Selin. A short description is given of the biographies of the most important collectors with notes on their itineraries. Details of the collections from the Kola Peninsula are mostly taken from the vascular-plant specimens kept in the Finnish main herbaria and entered in the Floristic database Kastikka of the Finnish Museum of Natural History.