Quickscan Cryptostroma Corticale April 2014
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Phylogenetic Assignment of the Fungicolous Hypoxylon Invadens (Ascomycota, Xylariales) and Investigation of Its Secondary Metabolites
microorganisms Article Phylogenetic Assignment of the Fungicolous Hypoxylon invadens (Ascomycota, Xylariales) and Investigation of its Secondary Metabolites Kevin Becker 1,2 , Christopher Lambert 1,2,3 , Jörg Wieschhaus 1 and Marc Stadler 1,2,* 1 Department of Microbial Drugs, Helmholtz Centre for Infection Research GmbH (HZI), Inhoffenstraße 7, 38124 Braunschweig, Germany; [email protected] (K.B.); [email protected] (C.L.); [email protected] (J.W.) 2 German Centre for Infection Research Association (DZIF), Partner site Hannover-Braunschweig, Inhoffenstraße 7, 38124 Braunschweig, Germany 3 Department for Molecular Cell Biology, Helmholtz Centre for Infection Research GmbH (HZI) Inhoffenstraße 7, 38124 Braunschweig, Germany * Correspondence: [email protected]; Tel.: +49-531-6181-4240; Fax: +49-531-6181-9499 Received: 23 July 2020; Accepted: 8 September 2020; Published: 11 September 2020 Abstract: The ascomycete Hypoxylon invadens was described in 2014 as a fungicolous species growing on a member of its own genus, H. fragiforme, which is considered a rare lifestyle in the Hypoxylaceae. This renders H. invadens an interesting target in our efforts to find new bioactive secondary metabolites from members of the Xylariales. So far, only volatile organic compounds have been reported from H. invadens, but no investigation of non-volatile compounds had been conducted. Furthermore, a phylogenetic assignment following recent trends in fungal taxonomy via a multiple sequence alignment seemed practical. A culture of H. invadens was thus subjected to submerged cultivation to investigate the produced secondary metabolites, followed by isolation via preparative chromatography and subsequent structure elucidation by means of nuclear magnetic resonance (NMR) spectroscopy and high-resolution mass spectrometry (HR-MS). -
Resurrection and Emendation of the Hypoxylaceae, Recognised from a Multigene Phylogeny of the Xylariales
Mycol Progress DOI 10.1007/s11557-017-1311-3 ORIGINAL ARTICLE Resurrection and emendation of the Hypoxylaceae, recognised from a multigene phylogeny of the Xylariales Lucile Wendt1,2 & Esteban Benjamin Sir3 & Eric Kuhnert1,2 & Simone Heitkämper1,2 & Christopher Lambert1,2 & Adriana I. Hladki3 & Andrea I. Romero4,5 & J. Jennifer Luangsa-ard6 & Prasert Srikitikulchai6 & Derek Peršoh7 & Marc Stadler1,2 Received: 21 February 2017 /Revised: 12 April 2017 /Accepted: 19 April 2017 # The Author(s) 2017. This article is an open access publication Abstract A multigene phylogeny was constructed, including polymerase II (RPB2), and beta-tubulin (TUB2). Specimens a significant number of representative species of the main were selected based on more than a decade of intensive mor- lineages in the Xylariaceae and four DNA loci the internal phological and chemotaxonomic work, and cautious taxon transcribed spacer region (ITS), the large subunit (LSU) of sampling was performed to cover the major lineages of the the nuclear rDNA, the second largest subunit of the RNA Xylariaceae; however, with emphasis on hypoxyloid species. The comprehensive phylogenetic analysis revealed a clear-cut This article is part of the “Special Issue on ascomycete systematics in segregation of the Xylariaceae into several major clades, honor of Richard P. Korf who died in August 2016”. which was well in accordance with previously established morphological and chemotaxonomic concepts. One of these The present paper is dedicated to Prof. Jack D. Rogers, on the occasion of his fortcoming 80th birthday. clades contained Annulohypoxylon, Hypoxylon, Daldinia,and other related genera that have stromatal pigments and a Section Editor: Teresa Iturriaga and Marc Stadler nodulisporium-like anamorph. -
Identification of Rosellinia Species As Producers Of
available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 96: 1–16 (2020). Identification of Rosellinia species as producers of cyclodepsipeptide PF1022 A and resurrection of the genus Dematophora as inferred from polythetic taxonomy K. Wittstein1,2, A. Cordsmeier1,3, C. Lambert1,2, L. Wendt1,2, E.B. Sir4, J. Weber1,2, N. Wurzler1,2, L.E. Petrini5, and M. Stadler1,2* 1Helmholtz-Zentrum für Infektionsforschung GmbH, Department Microbial Drugs, Inhoffenstrasse 7, Braunschweig, 38124, Germany; 2German Centre for Infection Research (DZIF), Partner site Hannover-Braunschweig, Braunschweig, 38124, Germany; 3University Hospital Erlangen, Institute of Microbiology - Clinical Microbiology, Immunology and Hygiene, Wasserturmstraße 3/5, Erlangen, 91054, Germany; 4Instituto de Bioprospeccion y Fisiología Vegetal-INBIOFIV (CONICET- UNT), San Lorenzo 1469, San Miguel de Tucuman, Tucuman, 4000, Argentina; 5Via al Perato 15c, Breganzona, CH-6932, Switzerland *Correspondence: M. Stadler, [email protected] Abstract: Rosellinia (Xylariaceae) is a large, cosmopolitan genus comprising over 130 species that have been defined based mainly on the morphology of their sexual morphs. The genus comprises both lignicolous and saprotrophic species that are frequently isolated as endophytes from healthy host plants, and important plant pathogens. In order to evaluate the utility of molecular phylogeny and secondary metabolite profiling to achieve a better basis for their classification, a set of strains was selected for a multi-locus phylogeny inferred from a combination of the sequences of the internal transcribed spacer region (ITS), the large subunit (LSU) of the nuclear rDNA, beta-tubulin (TUB2) and the second largest subunit of the RNA polymerase II (RPB2). Concurrently, various strains were surveyed for production of secondary metabolites. -
Phylogeny of Graphostromatacea with Three Species Isolated in China
Phylogeny of Graphostromatacea with Three Species Isolated in China Qirui Li ( [email protected] ) Guizhou medical university https://orcid.org/0000-0001-8735-2890 Xiaofeng Gong Guizhou science and technology information center Xu Zhang Guizhou Medical University Yinhui Pi Guizhou Medical University Sihan Long Guizhou Medical University Youpeng Wu Guizhou Medical University Xiangchun Shen Guizhou Medical University Yingqian Kang Guizhou Medical University Jichuan Kang Guizhou University Research Article Keywords: 2 new species, Ascomycota, polyphasic approach,taxonomy, Xylariales Posted Date: April 29th, 2021 DOI: https://doi.org/10.21203/rs.3.rs-398791/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Page 1/18 Abstract Three species possessing characteristics of Graphostromataceae were observed in China. Morphology of the described species with illustrations and their phylogeny based on regions of internal transcribed spacers (ITS), the second largest subunit of the RNA polymerase II (RPB2), β-tubulin (TUB2) and α-actin (ACT) are provided. Two new species and one new record from China were identied. Morphologically, Biscogniauxia glaucae sp. nov. differs from B. atropunctata var. maritima, B. citriformis var. macrospora, B. fuscella and B. mediterranea by its stromata with raised margins, with clear outlines, with punctate ostioles openings and ascospores which are equilateral with broadly rounded ends, with a straight germ slit on the more concave side, nearly full spore length, lacking appendages and sheathes. ITS sequence difference between Graphostroma guizhouensis sp. nov and type strain of G. platystomum is 7%, which support identifying it as a new species. Camillea broomeana with scanning electron microscope description of ascospores was illustrated as a new record from China. -
A Novel Species and a New Combination of Daldinia from Ban Hua Thung Community Forest in the Northern Part of Thailand
Mycological Progress (2019) 18:553–564 https://doi.org/10.1007/s11557-019-01469-3 ORIGINAL ARTICLE A novel species and a new combination of Daldinia from Ban Hua Thung community forest in the northern part of Thailand Sarunyou Wongkanoun1 & Lucile Wendt2,3 & Marc Stadler2,3 & Jennifer Luangsa-ard1 & Prasert Srikitikulchai1 Received: 21 November 2018 /Revised: 28 December 2018 /Accepted: 8 January 2019 # The Author(s) 2019 Abstract During a survey of Xylariales in northern Thailand, several specimens with affinities to the genus Daldinia were found and examined for morphological characters, secondary metabolites, and molecular phylogenetic traits. Aside from morphological and chemotaxonomic studies, a multi-locus phylogenetic analysis using internal transcribed spacers regions (ITS) and the large subunit (LSU) of the ribosomal DNA, the second largest subunit of the RNA polymerase (RPB2), and beta-tubulin (TUB2) genes was performed. Among the specimens was a new species and a new record of a species that had previously never been sequenced and studied for its anamorphic morphology. This species, previously described by Ju and Rogers as Hypoxylon kretzschmarioides based on a single record from Indonesia, showed secondary metabolite profiles reminiscent of those of the genus Daldinia and even clustered in the latter genus in the phylogenetic tree. Therefore, it is transferred to Daldinia as D. kretzschmarioides comb. nov. A second new species, D. subvernicosa sp. nov., was found to have a close relationship with D. vernicosa based on morphological and molecular evidence, but differs from D. vernicosa by long-stipitate asci with mostly subglobose ascospores, and the basal ascospores are often elongated. -
DEUTEROMYCETES and SELECTED ASCOMYCETES THAT OCCUR on OR in WOOD: an Indexed Bibliography
DEUTEROMYCETES GENERAL Forest Products Laboratory TECHNICAL Forest Service AND SELECTED REPORT U.S. Department of Agriculture ASCOMYCETES FPL 24 Madison, Wis. THAT OCCUR ON OR IN WOOD: An Indexed Bibliography 1979 Deuteromyetes and Selected Ascomycetes That Occur On or In Wood: An Indexed Bibliography* By E. L. STEWART, Assistant Professor of Mycology M. E. PALM, Research Assistant of Department of Pathology University of Minnesota St. Paul, Minn.,55108 and J. G. PALMER, Plant Pathologist W. E. ESLYN, Plant Pathologist Forest Products Laboratory, Forest Service U.S. Department of Agriculture P.O. Box 5130 Madison, Wis. 53705 General Technical Report FPL 24 * Also listed as University of Minnesota Experiment Station Publicatino No. 10,313. i CONTENTS Page Introduction..... ....................... 1 Use of Bibliography . ....................... 3 Substrate Index ... ....................... 5 Subject Index .... ....................... 8 Taxon Index ..... ....................... 12 Bibliography .... ....................... 47 Appended References ....................... 136 Author Index. .... ....................... 150 ACKNOWLEDGMENT Financial support, largely from the United States Department of Agriculture, Forest Service, Forest Products Laboratory, Madison, Wis. 53705, has made possible the compilation of the materials contained in this bibliography. The comments and suggestions of those kind enough to have reviewed the bibliography are sincerely appreciated. ii ABSTRACT This report lists 1,008 publications that include deutero- mycetous and ascomycetous fungi occurring on wood--principally wood in storage and use. Each publication is numbered and indexed by the one or more manmade or natural substrates, by general subject areas, and by authors. More than 1,150 fungi in 269 genera are listed alphabetically by genus and species. An additional 66 genera are represented by unidentified species. The fungi cited are also referenced by publication number. -
Phylogenetic and Chemotaxonomic Studies Confirm the Affinities Of
Journal of Fungi Article Phylogenetic and Chemotaxonomic Studies Confirm the Affinities of Stromatoneurospora phoenix to the Coprophilous Xylariaceae Kevin Becker 1,2 , Sarunyou Wongkanoun 3,4, Anna-Charleen Wessel 1, Gerald F. Bills 5, Marc Stadler 1,2,* and J. Jennifer Luangsa-ard 6,* 1 Department of Microbial Drugs, Helmholtz Centre for Infection Research GmbH (HZI), Inhoffenstraße 7, 38124 Braunschweig, Germany; [email protected] (K.B.); [email protected] (A.-C.W.) 2 German Centre for Infection Research Association (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstraße 7, 38124 Braunschweig, Germany 3 Faculty of Biotechnology, College of Agricultural Innovation, Biotechnology and Food, Rangsit University, Phahonyothin Road, Lak-Hok, Pathum Thani 12000, Thailand; [email protected] 4 National Biobank of Thailand (NBT), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong Luang, Pathum Thani 12120, Thailand 5 Texas Therapeutics Institute, The Brown Foundation Institute of Molecular Medicine, The University of Texas Health Science Center at Houston, 1881 East Road, Houston, TX 77054, USA; [email protected] 6 Plant Microbe Interaction Research Team (APMT), Integrative Crop Biotechnology and Management Research Group, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong Luang, Pathum Thani 12120, Thailand * Correspondence: [email protected] (M.S.); [email protected] (J.J.L.); Tel.: +49-531-6181-4240 (M.S.); +66-2-56467003349 (J.J.L.); Fax: +49-531-6181-9499 (M.S.); +66-2-5646707 (J.J.L.) Received: 23 July 2020; Accepted: 19 August 2020; Published: 23 August 2020 Abstract: The genus Stromatoneurospora was erected in 1973 by Jong and Davis to accommodate the pyrophilic pyrenomycete Sphaeria phoenix and has traditionally been placed in the family Xylariaceae based on morphological features.