Coral Reef Resilience for Decision Support
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Catherine Kim Curriculum Vitae School of Biological Sciences | the University of Queensland Level 7 Gehrmann Laboratory, St
Catherine Kim Curriculum Vitae School of Biological Sciences | The University of Queensland Level 7 Gehrmann Laboratory, St. Lucia, QLD 4072 [email protected] | www.catherinejkim.com | SeaCatKim | +617 3365 2118 EDUCATION 2021 Ph.D. The University of Queensland Australia School of Biological Sciences, St. Lucia, Queensland, Australia Thesis Title: Drivers of benthic composition, cryptic marine biodiversity, and coral health in Timor-Leste. Advisors: Prof. Ove Hoegh-Guldberg, Assoc. Prof. Sophie Dove, Dr. Chris Roelfsema Awards: XL Catlin Oceans Scholar, Faculty of Science Awards 2020 Finalist 2012 B.S. Cornell University – Science of Earth Systems (Oceanography concentration) College of Agriculture and Life Sciences, Ithaca, New York, USA Advisor: Prof. Chuck Greene Awards: Cum Laude, Dean’s List six semesters, Michael Mitchell Award EXPERTISE Discipline Knowledge Coral Reef Ecology, Fieldwork, and Data Skills Working knowledge of impacts from local and global stressors on coral reef ecosystems Execution of field work campaigns in remote areas including Timor-Leste, Australia, and Hawai‘i Experience with coral reef underwater monitoring protocols and working with field teams Knowledge of citizen science methods such as Reef Check and Coral Watch Implementation and validation of automated image analysis pipelines using machine learning Familiarity with remote sensing, GIS, and data visualization Experience managing complex datasets and summarizing data in R Diving Experience and Certifications Australian Divers Accreditation Scheme -
TP 170 2010 Florida Artificial Reef Summit Abstracts
Conference Sponsors These organizations are contributing to the research and outreach that supports the wise development of artificial reef programs and sustainable management of Florida’s marine fishery. 2010 FLORIDA Platinum MARI AN NE Artificial IC G R R E O M U A P N o 3 r 3 fo 00 lk, 0- VA (757) 99 Reef Summit Gold Silver Bronze Abstracts & Program January 21-23, 2010 • Cocoa Beach, Florida Conference Organizing Sponsors As chairs of the organizing committee, we welcome you to the 2010 Florida Artificial Reef Summit. With 1,357 miles of coastline, involvement by 34 different counties, and over 2,500 artificial reefs deployed to date, Florida manages one of the most diverse and most active artificial reef programs in the United States. Because artificial reef development in Florida works with, and depends upon, a network of local partners, inter-county coordina- tion and communication is critical to ensure successful implementation of statewide strate- gic objectives for artificial reef development. This Summit occurs every 3 to 5 years and provides the format for local partners to meet and exchange information. It is a critical opportunity for the Florida Fish and Wildlife Con- In Memoriam servation Commission Artificial Reef Program and Florida Sea Grant to disperse high-quality information, experience and program goals and objectives directly with all of Florida’s The 2010 Artificial Reef Summit is dedicated to the memory of Chris Koepfer, the long-time Lee County Arti- artificial reef stakeholders. ficial Reef Coordinator who passed away in 2009. Chris was a well-respected member of Florida’s artificial reef community and played a major role in establishing one of the most successful county artificial reef programs in This will be the eighth Summit. -
I. I NOV20 2017
or UNITED STATES DEPARTMENT OF COMMERCE / National Oceanic and Atmospheric Administration * i. I NATIONAL MARINE FISHERIES SERVICE Southeast Regional Office 4rES O LQi 3U Ie1U SOU St. Petersburg, Florida 33701-5505 http://sero.nmfs.noaa.gov F/SER3 1: NMB SER-2015- 17616 NOV20 2017 Mr. Donald W. Kinard Chief, Regulatory Division U.S. Army Corps of Engineers P.O. Box 4970 Jacksonville, Florida 32232-0019 Ref.: U.S. Army Corps of Engineers Jacksonville District’s Programmatic Biological Opinion (JAXBO) Dear Mr. Kinard: Enclosed is the National Marine Fisheries Service’s (NMFS’s) Programmatic Biological Opinion (Opinion) based on our review of the impacts associated with the U.S. Army Corps of Engineers (USACE’s) Jacksonville District’s authorization of 10 categories of minor in-water activities within Florida and the U.S. Caribbean (Puerto Rico and the U.S. Virgin Islands). The Opinion analyzes the effects from 10 categories of minor in-water activities occurring in Florida and the U.S. Caribbean on sea turtles (loggerhead, leatherback, Kemp’s ridley, hawksbill, and green); smalitooth sawfish; Nassau grouper; scalloped hammerhead shark, Johnson’s seagrass; sturgeon (Gulf, shortnose, and Atlantic); corals (elkhom, staghorn, boulder star, mountainous star, lobed star, rough cactus, and pillar); whales (North Atlantic right whale, sei, blue, fin, and sperm); and designated critical habitat for Johnson’s seagrass; smalltooth sawfish; sturgeon (Gulf and Atlantic); sea turtles (green, hawksbill, leatherback, loggerhead); North Atlantic right whale; and elkhorn and staghorn corals in accordance with Section 7 of the Endangered Species Act. We also analyzed effects on the proposed Bryde’s whale. -
Make an Edible Coral Reef
Science | Service | STEWARDSHIP PROTECT THE EARTH MakeMake anan EdibleEdible CoralCoral ReefReef Spanish hogfi sh at reef. Courtesy Florida Keys National Marine Sanctuary You have probably seen pictures of coral reefs before—lots of colors, fi sh- dollars. Local economies receive billions of dollars from visitors to reefs es, and weird looking shapes! Coral reefs are not only beautiful to look through diving tours, recreational fi shing trips, hotels, restaurants, and at; they are also home to thousands of other species. In fact, scientists other businesses based near reef ecosystems. Coral reefs protect shore- estimate that there may be another one to eight million undiscovered lines against waves, storms and fl oods, and help prevent loss of life, species living in and around reefs! Coral reefs support more species per property damage and erosion. square foot than any other marine environment. This abundance of living organisms is key to fi nding new medicines for the 21st century. Many Despite their importance, many of Earth’s coral reefs are in trouble. Se- drugs are now being developed from coral reef animals and plants as vere storms, water pollution, overfi shing, disease, global climate change, possible cures for cancer, arthritis, human bacterial infections, viruses, and ships running aground are some of the things that have destroyed or and other diseases. badly damaged many reefs. Because of these threats, coral reefs and all of the creatures that call them home may be in danger of disappearing if Coral reefs are important for other reasons as well. Coral reefs are a something isn’t done to protect them. -
Growth and Survivorship of Scleractinian Coral Transplants And
Nova Southeastern University NSUWorks Oceanography Faculty Proceedings, Presentations, Department of Marine and Environmental Sciences Speeches, Lectures 2006 Growth and Survivorship of Scleractinian Coral Transplants and the Effectiveness of Plugging Core Holes in Transplant Donor Colonies Elizabeth Glynn Fahy Nova Southeastern University Richard E. Dodge Nova Southeastern University, [email protected] Daniel P. Fahy Nova Southeastern University, [email protected] T. Patrick Quinn Nova Southeastern University David S. Gilliam Nova Southeastern University, [email protected] See next page for additional authors Follow this and additional works at: http://nsuworks.nova.edu/occ_facpresentations Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons NSUWorks Citation Fahy, Elizabeth Glynn; Dodge, Richard E.; Fahy, Daniel P.; Quinn, T. Patrick; Gilliam, David S.; and Spieler, Richard E., "Growth and Survivorship of Scleractinian Coral Transplants and the Effectiveness of Plugging Core Holes in Transplant Donor Colonies" (2006). Oceanography Faculty Proceedings, Presentations, Speeches, Lectures. Paper 44. http://nsuworks.nova.edu/occ_facpresentations/44 This Conference Proceeding is brought to you for free and open access by the Department of Marine and Environmental Sciences at NSUWorks. It has been accepted for inclusion in Oceanography Faculty Proceedings, Presentations, Speeches, Lectures by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Authors Elizabeth Glynn Fahy, Richard E. Dodge, Daniel P. Fahy, T. Patrick Quinn, David S. Gilliam, and Richard E. Spieler This conference proceeding is available at NSUWorks: http://nsuworks.nova.edu/occ_facpresentations/44 Growth and survivorship of scleractinian coral transplants and the effectiveness of plugging core holes in transplant donor colonies Elizabeth Glynn FAHY*, Richard E. -
Solutions in Ecosystem Restorations
Acknowledgments ne of the more common questions in restoration We thank Adam Puderbaugh, Cassie Herringshaw, Dan Anderson, Oscience is how grassroots organizations can conduct and Rebecca Burch for assistance with sample collection and pro- and participate in meaningful and ecologically sound res- cessing, and Jimmie Thompson, Dean Biechler, Scott Brunsheen, toration projects. The Reef Ball Foundation (RBF) is a Don Farrar, Kevin Shawgo, John Pearson, and Steve Lekwa for nonprofit organization dedicated to protection and resto- identification of and permission to use sample sites. Support for ration of reef ecosystems. Scientists and other RBF experts this project was provided by the Leopold Center for Sustainable Agriculture, the Pioneer Foundation, and McIntire-Stennis funds. have been collaborating for over a decade to develop tools that can be easily implemented in the field by grassroots groups, to facilitate successful localized restoration, reha- References bilitation, and reintroduction projects. However, restora- Anderson, W.B. and W.G. Eickmeier. 2000. Nutrient resorption tion efforts such as these, while often showing reasonable in Claytonia virginica L.: Implications for deciduous forest localized success rates, have received a fair amount of criti- nutrient cycling. Canadian Journal of Botany 78:832–839. cism about their ineffectiveness in the face of large-scale Blank, J.L., R.K. Olson and P.M. Vitousek. 1980. Nutrient uptake by a diverse spring ephemeral community. Oecologia threats to coral reefs, such as climate change and ocean 47:96–98. acidification (e.g., Pandolfi et al. 2003, De’ath et al. 2009). Eickmeier, W.G. and E.E. Schussler. 1993. Responses of In light of these larger threats, small-scale coral restoration the spring ephemeral Claytonia virginica L. -
A Bayesian Latent Allocation Model for Clustering Compositional Data with Application to the Great Barrier Reef
A Bayesian latent allocation model for clustering compositional data with application to the Great Barrier Reef Luiza S.C. Piancastelli1,∗ Nial Friel1;2†, Julie Vercelloni3‡, Kerrie Mengersen3§ and Antonietta Mira4¶ 1School of Mathematics and Statistics, University College Dublin, Dublin, Ireland 2Insight Centre for Data Analytics 3School of Mathematical Sciences, Queensland University of Technology, Brisbane, Queensland, Australia 4Data Science Lab, Università della Svizzera italiana, Lugano, Switzerland Abstract Relative abundance is a common metric to estimate the composition of species in ecological sur- veys reflecting patterns of commonness and rarity of biological assemblages. Measurements of coral reef compositions formed by four communities along Australia’s Great Barrier Reef (GBR) gathered between 2012 and 2017 are the focus of this paper. We undertake the task of finding clusters of tran- sect locations with similar community composition and investigate changes in clustering dynamics over time. During these years, an unprecedented sequence of extreme weather events (two cyclones and two coral bleaching events) impacted the 58 surveyed locations. The dependence between constituent parts of a composition presents a challenge for existing multivariate clustering approaches. In this arXiv:2105.02140v1 [stat.AP] 5 May 2021 paper, we introduce a new model that is a finite mixture of Dirichlet distributions with group-specific parameters, where cluster memberships are dictated by unobserved latent variables. The inference is carried in a Bayesian framework, where Markov Chain Monte Carlo strategies are outlined to sample from the posterior model. Simulation studies are presented to illustrate the performance of the model in a controlled setting. The application of the model to the 2012 coral reef data reveals that clusters ∗Corresponding author. -
Impacts of Climate Change on World Heritage Coral Reefs a First Global Scientific Assessment Coordinating Lead Authors: Scott F
NIO M O UN IM D R T IA A L • P • W L O A I R D L D N H O E M R I E TA IN G O E • PATRIM United Nations World Educational, Scientific and Heritage Cultural Organization Convention Impacts of Climate Change on World Heritage Coral Reefs A First Global Scientific Assessment Coordinating Lead Authors: Scott F. Heron1,2, C. Mark Eakin1, Fanny Douvere3 Contributing Authors*: Kristen Anderson4, Jon C. Day4, Erick Geiger1,2, Ove Hoegh-Guldberg5, Ruben van Hooidonk6,7, Terry Hughes4, Paul Marshall8,9, David Obura10 *listed in alphabetical order Suggested citation: Heron et al. 2017. Impacts of Climate Change on World Heritage Coral Reefs : A First Global Scientific Assessment. Paris, UNESCO World Heritage Centre. © UNESCO, 2017. CLT-2017/WS/12 All pictures in this assessment may not be used or reproduced without the prior permission of the copyright holders. This assessment aims to make available the most current knowledge regarding the impacts of climate change on World Heritage properties as requested by the World Heritage Committee Decision 40 COM 7 (Istanbul/UNESCO, 2016). Photo cover: © The Ocean Agency, XL Catlin Seaview Survey, Christophe Bailhache Great Barrier Reef, Lizard Island © The Ocean Agency, XL Catlin Seaview Survey, Richard Vevers Great Barrier Reef © NOAA An artist’s rendering of America’s next-generation geostationary weather satellite 1Coral Reef Watch, U.S. National Oceanic and Atmospheric Administration, USA 2Global Science & Technology, Inc., USA 3World Heritage Centre, Marine Programme, UNESCO, Paris, France 4Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Australia 5Global Change Institute, University of Queensland, Australia 6NOAA Atlantic Oceanographic and Meteorological Laboratory, Ocean Chemistry and Ecosystems Division, 4301 Rickenbacker Causeway, Miami, USA. -
Forecasting Intensifying Disturbance Effects on Coral Reefs
Author Manuscript This is the author manuscript accepted for publication and has undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record. Please cite this article as doi: 10.1111/GCB.15059 This article is protected by copyright. All rights reserved Forecasting intensifying disturbance effects on coral reefs Julie Vercelloni∗1, 2, 3, 4, Benoit Liquet3, 5, Emma V. Kennedy†2, Manuel Gonzalez-Rivero´ ‡1, 2, M. Julian Caley3, 4, Erin E. Peterson3, 6, Marji Puotinen7, Ove Hoegh-Guldberg1, 2, and Kerrie Mengersen3, 4, 6 1ARC Centre of Excellence for Coral Reef Studies, School of Biological Sciences, The University of Queensland, St Lucia, QLD 4072, Australia 2The Global Change Institute, The University of Queensland, St Lucia, QLD 4072, Australia 3ARC Centre of Excellence for Mathematical and Statistical Frontiers, Queensland University of Technology, Brisbane, QLD 4000, Australia 4School of Mathematical Sciences, Science and Engineering Faculty, Queensland University of Technology, Brisbane, QLD 4000, Australia 5Universite´ de Pau et des Pays de l’Adour, E2S UPPA, CNRS, LMAP, Pau, France 6Institute for Future Environments, Queensland University of Technology, Brisbane, QLD 4000 Australia 7Australian Institute of Marine Science, Indian Ocean Marine Research Centre, University of Western Australia, Crawley, WA 6009, Australia 1 Running title Modelling the structure of reef communities ∗Corresponding author - Electronic address: [email protected]; Phone number: +61731389817; ORCiD: 0000-0001-5227-014X †PresentAuthor Manuscript affiliation: School of Earth and Environmental Sciences, Faculty of Science, The University of Queensland, St Lucia, QLD 4072, Australia ‡Present affiliation: Australian Institute of Marine Science, PMB 3, Townsville MC, QLD 4810, Australia 1 This article is protected by copyright. -
The Great Barrier Reef and Coral Sea 20 Tom C.L
The Great Barrier Reef and Coral Sea 20 Tom C.L. Bridge, Robin J. Beaman, Pim Bongaerts, Paul R. Muir, Merrick Ekins, and Tiffany Sih Abstract agement approaches that explicitly considered latitudinal The Coral Sea lies in the southwestern Pacific Ocean, bor- and cross-shelf gradients in the environment resulted in dered by Australia, Papua New Guinea, the Solomon mesophotic reefs being well-represented in no-take areas in Islands, Vanuatu, New Caledonia, and the Tasman Sea. The the GBR. In contrast, mesophotic reefs in the Coral Sea Great Barrier Reef (GBR) constitutes the western margin currently receive little protection. of the Coral Sea and supports extensive submerged reef systems in mesophotic depths. The majority of research on Keywords the GBR has focused on Scleractinian corals, although Mesophotic coral ecosystems · Coral · Reef other taxa (e.g., fishes) are receiving increasing attention. · Queensland · Australia To date, 192 coral species (44% of the GBR total) are recorded from mesophotic depths, most of which occur shallower than 60 m. East of the Australian continental 20.1 Introduction margin, the Queensland Plateau contains many large, oce- anic reefs. Due to their isolated location, Australia’s Coral The Coral Sea lies in the southwestern Pacific Ocean, cover- Sea reefs remain poorly studied; however, preliminary ing an area of approximately 4.8 million square kilometers investigations have confirmed the presence of mesophotic between latitudes 8° and 30° S (Fig. 20.1a). The Coral Sea is coral ecosystems, and the clear, oligotrophic waters of the bordered by the Australian continent on the west, Papua New Coral Sea likely support extensive mesophotic reefs. -
BIOT Field Report
©2015 Khaled bin Sultan Living Oceans Foundation. All Rights Reserved. Science Without Borders®. All research was completed under: British Indian Ocean Territory, The immigration Ordinance 2006, Permit for Visit. Dated 10th April, 2015, issued by Tom Moody, Administrator. This report was developed as one component of the Global Reef Expedition: BIOT research project. Citation: Global Reef Expedition: British Indian Ocean Territory. Field Report 19. Bruckner, A.W. (2015). Khaled bin Sultan Living Oceans Foundation, Annapolis, MD. pp 36. The Khaled bin Sultan Living Oceans Foundation (KSLOF) was incorporated in California as a 501(c)(3), public benefit, Private Operating Foundation in September 2000. The Living Oceans Foundation is dedicated to providing science-based solutions to protect and restore ocean health. For more information, visit http://www.lof.org and https://www.facebook.com/livingoceansfoundation Twitter: https://twitter.com/LivingOceansFdn Khaled bin Sultan Living Oceans Foundation 130 Severn Avenue Annapolis, MD, 21403, USA [email protected] Executive Director Philip G. Renaud Chief Scientist Andrew W. Bruckner, Ph.D. Images by Andrew Bruckner, unless noted. Maps completed by Alex Dempsey, Jeremy Kerr and Steve Saul Fish observations compiled by Georgia Coward and Badi Samaniego Front cover: Eagle Island. Photo by Ken Marks. Back cover: A shallow reef off Salomon Atoll. The reef is carpeted in leather corals and a bleached anemone, Heteractis magnifica, is visible in the fore ground. A school of giant trevally, Caranx ignobilis, pass over the reef. Photo by Phil Renaud. Executive Summary Between 7 March 2015 and 3 May 2015, the Khaled bin Sultan Living Oceans Foundation conducted two coral reef research missions as components of our Global Reef Expedition (GRE) program. -
Rbf Annual Report: Update on Projects 2016
ANNUAL REPORT: UPDATE ON PROJECTS 2016 We make our impact through education, raising public awareness, community involvement and innovative Reef Ball technology. Education At the Reef Ball Foundation, we believe it’s far easier to save our ocean ecosystems than rehabilitate them. Here is snapshot of some of our educational activities. Above: Kathy Kirbo speaks at primary school in Zanzibar, Tanzania. Above: The Girl Scouts of Sarasota, Florida win the Bronze Award with their Reef Ball project. Watch video about their project produced by the city of Sarasota. Girl Scouts Reef Ball Project Video Public Awareness At the very least our many projects bring to the light the importance of our oceans and why they are worth protecting and restoring. To further our mission, Reef Ball has received extensive press coverage on CNN, ENN, the Discovery Channel, National Geographic, Weekly Reader, Popular Science, The Wall Street Journal, Mother Jones, Wired, Scientific American, The Economist and various diving publications and in numerous newspapers throughout the world. Our featured article: The Economist: “Watery Dwellings-New Ways To Construct Underwater Environments Are Encouraging Marine Life and Boosting Fish Stocks.” The Economist article on Reef Ball Awards The Reef Ball Foundation won the National Environmental Protection Prize in 2012 by the Classy Awards which is the largest philanthropic awards ceremony in the country, is a Laureate of the Intel's global environmental award, The Tech Award, for technology that benefits humanity in 2005, CNN Hero-Defender of the Planet in 2008, and my Hero Project selected the Reef Ball Foundation as a science here in 2005.