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												  Recent Advances in Trypanosomatid Research: Genome Organization, Expression, Metabolism, Taxonomy and EvolutionParasitology Recent advances in trypanosomatid research: genome organization, expression, metabolism, cambridge.org/par taxonomy and evolution 1 2 3,4 5,6 Review Dmitri A. Maslov , Fred R. Opperdoes , Alexei Y. Kostygov , Hassan Hashimi , Julius Lukeš5,6 and Vyacheslav Yurchenko3,5,7 Cite this article: Maslov DA, Opperdoes FR, Kostygov AY, Hashimi H, Lukeš J, Yurchenko V 1Department of Molecular, Cell and Systems Biology, University of California – Riverside, Riverside, California, USA; (2018). Recent advances in trypanosomatid 2de Duve Institute, Université Catholique de Louvain, Brussels, Belgium; 3Life Science Research Centre, Faculty of research: genome organization, expression, 4 metabolism, taxonomy and evolution. Science, University of Ostrava, Ostrava, Czech Republic; Zoological Institute of the Russian Academy of Sciences, 5 Parasitology 1–27. https://doi.org/10.1017/ St. Petersburg, Russia; Biology Centre, Institute of Parasitology, Czech Academy of Sciences, České Budejovice 6 S0031182018000951 (Budweis), Czech Republic; University of South Bohemia, Faculty of Sciences, České Budejovice (Budweis), Czech Republic and 7Martsinovsky Institute of Medical Parasitology, Tropical and Vector Borne Diseases, Sechenov Received: 30 January 2018 University, Moscow, Russia Revised: 23 April 2018 Accepted: 23 April 2018 Abstract Key words: Unicellular flagellates of the family Trypanosomatidae are obligatory parasites of inverte- Gene exchange; kinetoplast; metabolism; molecular and cell biology; taxonomy; brates, vertebrates and plants. Dixenous species are aetiological agents of a number of diseases trypanosomatidae in humans, domestic animals and plants. Their monoxenous relatives are restricted to insects. Because of the high biological diversity, adaptability to dramatically different environmental Author for correspondence: conditions, and omnipresence, these protists have major impact on all biotic communities Vyacheslav Yurchenko, E-mail: vyacheslav.
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												  A Revised Six-Kingdom System of LifeHi ul. R iv. ' 1998,', 73, p p . 203-266 printed in the United Kingdom © Cambridge Philosophical Society 203 A revised six-kingdom system of life T. CAVALIER-SMITH Evolutionary Biology Programme, Canadian Institute for Advanced Research , Department o f Botany , University o f British Columbia, Vancouver, BC, Canada V6T If4 (.Received 27 M arch 1 9 9 6 ; revised 15 December 1 9 9 7 ; accepted 18 December 1997) ABSTRACT A revised six-kingdom system of life is presented, down to the level of infraphylum. As in my 1983 system Bacteria are treated as a single kingdom, and eukaryotes are divided into only five kingdoms: Protozoa, Animalia, Fungi, Plantae and Chromista. Interm ediate high level categories (superkingdom, subkingdom, branch, infrakingdom, supcrphylum, subphylum and infraphylum) arc extensively used lo avoid splitting organisms into an excessive num ber of kingdoms and phyla (60 only being recognized). The two ‘zoological ’ kingdoms. Protozoa and Animalia, are subject to the International Code of Zoological Nomenclature, the kingdom Bacteria to the International Code of Bacteriological Nomenclature, and the three ‘botanical’ kingdoms (Plantae, Fungi, Chromista) lo the International Code of Botanical Nomenclature, Circumscrip tions of the kingdoms Bacteria and Plantae remain unchanged since Cavalicr-Smith (1981). The kingdom Fungi is expanded by adding M icrosporidia, because of protein sequence evidence that these amitochondrial intracellular parasites are related to conventional Fungi, not Protozoa. Fungi arc subdivided into four phyla and 20 classes; fungal classification at the rank of subclass and above is comprehensively revised. The kingdoms Protozoa and Animalia are modified in the light of molecular phylogenetic evidence that Myxozoa arc actually Animalia, not Protozoa, and that mesozoans arc related lo bilaterian animals.
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												  Phylogeny and Evolutionary Perspective of Opisthokonta ProtistsPhylogeny and evolutionary perspective of Opisthokonta protists Guifré Torruella i Cortés ADVERTIMENT. La consulta d’aquesta tesi queda condicionada a l’acceptació de les següents condicions d'ús: La difusió d’aquesta tesi per mitjà del servei TDX (www.tdx.cat) i a través del Dipòsit Digital de la UB (diposit.ub.edu) ha estat autoritzada pels titulars dels drets de propietat intel·lectual únicament per a usos privats emmarcats en activitats d’investigació i docència. No s’autoritza la seva reproducció amb finalitats de lucre ni la seva difusió i posada a disposició des d’un lloc aliè al servei TDX ni al Dipòsit Digital de la UB. No s’autoritza la presentació del seu contingut en una finestra o marc aliè a TDX o al Dipòsit Digital de la UB (framing). Aquesta reserva de drets afecta tant al resum de presentació de la tesi com als seus continguts. En la utilització o cita de parts de la tesi és obligat indicar el nom de la persona autora. ADVERTENCIA. La consulta de esta tesis queda condicionada a la aceptación de las siguientes condiciones de uso: La difusión de esta tesis por medio del servicio TDR (www.tdx.cat) y a través del Repositorio Digital de la UB (diposit.ub.edu) ha sido autorizada por los titulares de los derechos de propiedad intelectual únicamente para usos privados enmarcados en actividades de investigación y docencia. No se autoriza su reproducción con finalidades de lucro ni su difusión y puesta a disposición desde un sitio ajeno al servicio TDR o al Repositorio Digital de la UB.
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												  Tree of Life by Dana VisalliThe Tree of Life by Dana Visalli/www.methownaturalist.com It is not known how life on earth began. Genetic and chemical evidence indicates that life was initiat- ed only once, as one species, and that all succeeding organisms are descendants of this first life, which is known as LUCA--the last universal common ancestor. The Earth is thought to be 4.5 billion years old, and life appeared approximately 3.8 billion years ago, almost as soon as the planet had stabilized ade- quately for life to be theoretically possible. Estimates for the total number of species alive today vary wildly, from around 5 million to more than 100 million. 1.8 million species have been named and catego- rized by scientists. The immediate evolutionary relationships among organisms are not universally agreed upon and so the branching of the Tree of Life has different interpretations. The one used here is one of the more straightforward versions. Life began as relatively simple, single cells resembling Bacteria, and diversified from there into 6 distinct Kingdoms: Bacteria, Archea, Protists, Plants, Fungi and Animals. A currently popular alternate tree divides life first into 3 domains--Bacteria, Archea, and Eukaryotes (see below), and then the Eukaryotes radiated into 4 kingdoms. An important evolutionary division is between prokaryotes and eukaryotes. The word prokaryote translates from the Greek as ‘before the seed,’ or ‘before the nucleus.’ Prokaryotes--Bacteria and Archea- -do not have a nucleus in their cells--a separate area with its own membrane that contains the DNA of the cell. The word eukaryote means ‘true seed’ or ‘true nucleus,’ and obviously a eukaryote does have a nu- cleus.