Publications for Ruth Hall

2021 href="http://dx.doi.org/10.1016/j.ijbiomac.2020.11.005">[More Harmer, C., Pong, C., Hall, R. (2021). A brief guide to correct Information] annotation of IS26 and variants. Journal of Antimicrobial Harmer, C., Hall, R. (2021). IS26 cannot move alone. Journal Chemotherapy, 76(8), 2213-2215. [More href="http://dx.doi.org/10.1093/jac/dkab055">[More Information] Information] Kasimova, A., Arbatsky, N., Tickner, J., Kenyon, J., Hall, R., Harmer, C., Hall, R. (2021). Targeted Conservative Cointegrate Shneider, M., Dzhaparova, A., Shashkov, A., Chizhov, A., Formation Mediated by IS26 Family Members Requires Popova, A., et al (2021). Acinetobacter baumannii k106 and Sequence Identity at the Reacting End. mSphere, 6(1), 1-14. [More containing capsular polysaccharides. International Journal of Information] Molecular Sciences, 22(11), 1-13. [More Information] 2020 Ambrose, S., Hall, R. (2020). A novel trimethoprim resistance Hamidian, M., Ambrose, S., Blackwell, G., Nigro, S., Hall, R. gene, dfrA38, found in a sporadic Acinetobacter baumannii (2021). An outbreak of multiply antibiotic-resistant isolate. Journal of Antimicrobial Chemotherapy, 75(12), 3694- ST49:ST128:KL11:OCL8 Acinetobacter baumannii isolates at a 3695. [More Sydney hospital. Journal of Antimicrobial Chemotherapy, Information] 76(4), 893-900. [More Cahill, S., Arbatsky, N., Shashkov, A., Shneider, M., Popova, Information] A., Hall, R., Kenyon, J., Knirel, Y. (2020). Elucidation of the K32 Capsular Polysaccharide Structure and Characterization of Pong, C., Hall, R. (2021). An X1-alpha plasmid from a the KL32 Gene Cluster of Acinetobacter baumannii LUH5549. Salmonella enterica serovar Ohio isolate carrying a novel IS26- Biochemistry (Moscow), 85(2), 241-247. [More 102561. href="http://dx.doi.org/10.1016/j.plasmid.2021.102561">[More Information] Pong, C., Moran, R., Hall, R. (2020). Evolution of IS26- bounded pseudo-compound transposons carrying the tet(C) Partridge, S., Enne, V., Grohmann, E., Hall, R., Rood, J., Roy, tetracycline resistance determinant. Plasmid, 112, 102541. [More elements and their interactions from sequence data: The Information] importance of existing biological knowledge. Proceedings of the National Academy of Sciences of the United States of Wyres, K., Cahill, S., Holt, K., Hall, R., Kenyon, J. (2020). America, 118(35), 1-4. [More polysaccharide (KL) and lipooligosaccharide outer core (OCL) Information] synthesis in genome assemblies using curated reference databases compatible with kaptive. Microbial Genomics, 6(3), Roy, P., Partridge, S., Hall, R. (2021). Comment on Conserved 339. [More class 1 integrons revealed by assessing the bacterial genome Information] and plasmid collection" by AN Zhang et al". Microbiome, 9(1), 3. [More Information] IS1216 also form cointegrates by copy-in and targeted conservative routes. mSphere, 5(1), 00811-19. [More family transposons carrying genes for synthesis and uptake of Information] fimsbactin siderophores among Acinetobacter baumannii isolates. Microbial Genomics, 7(3). [More Popova, A., Knirel, Y., Hall, R. (2020). K17 capsular Information] polysaccharide produced by Acinetobacter baumannii isolate G7 contains an amide of 2-acetamido-2-deoxy-D-galacturonic Ambrose, S., Hall, R. (2021). Identification of the dfrA4 acid with D-alanine. International Journal of Biological trimethoprim resistance gene. Journal of Antimicrobial Macromolecules, 144, 857-862. [More href="http://dx.doi.org/10.1093/jac/dkab110">[More Information] Information] de Curraize, C., Siebor, E., Neuwirth, C., Hall, R. (2020). SGI0, Kenyon, J., Arbatsky, N., Sweeney, E., Zhang, Y., a relative of Salmonella genomic islands SGI1 and SGI2, Senchenkova, S., Popova, A., Shneider, M., Shashkov, A., Liu, lacking a class 1 integron, found in Proteus mirabilis. Plasmid, B., Hall, R., et al (2021). Involvement of a multifunctional 107, 102453. [More Acinetobacter baumannii capsular polysaccharides, K55, K74 Information] and K85. International Journal of Biological Macromolecules, 166, 1230-1237. [More the K8 and K54 capsular polysaccharides produced by Information] Acinetobacter baumannii BAL 097 and RCH52 have the same structure but contain different di-N-acyl derivatives of Harmer, C., Hall, R. (2020). The Complete Nucleotide legionaminic acid and are linked differently. Carbohydrate Sequence of pZM3, a 1970 FIA:FIB:FII Plasmid Carrying Research, 483, 1-7. [More Drug Resistance: Mechanisms Epidemiology And Disease, Information] 26(5), 438-446. [More Blackwell, G., Hall, R. (2019). Mobilisation of a small Information] Acinetobacter plasmid carrying an oriT transfer origin by conjugative RepAci6 plasmids. Plasmid, 103, 36-44. [More Information] Harmer, C., Hall, R. (2019). An analysis of the IS6/IS26 family of insertion sequences: is it a single family? Microbial Ambrose, S., Hall, R. (2019). Novel trimethoprim resistance Genomics, 5(9), 1-19. [More Antimicrobial Chemotherapy, 74(7), 1863-1866. href="http://dx.doi.org/10.1093/jac/dkz148">[More Information] Moran, R., Anantham, S., Hall, R. (2019). An improved plasmid size standard, 39R861+. Plasmid, 102, 6-9. [More plasmid from a commensal Escherichia coli has two inversely Information] oriented oriTs and is mobilised by a B/O plasmid. Plasmid, 101, 10-19. [More variant with enhanced activity. FEMS Microbiology Letters, Information] 366(3), 1-6. [More Kenyon, J., Arbatsky, N., Sweeney, E., Shashkov, A., Shneider, Information] M., Popova, A., Hall, R., Knirel, Y. (2019). Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 Moran, R., Richardson, I., Hall, R. (2019). Analysis of two B/O isolate D4 involves a novel glycosyltransferase encoded in the plasmids, R805a from 1972 and pCERC6 from 2008, reveals KL16 gene cluster. International Journal of Biological extensive mosaicism in B/O plasmid backbones. Plasmid, 102, Macromolecules, 128, 101-106. [More href="http://dx.doi.org/10.1016/j.plasmid.2019.02.005">[More Information] Information] Arbatsky, N., Kasimova, A., Shashkov, A., Shneider, M., Moran, R., Hall, R. (2019). B/O plasmid R16 from 1956 carries Popova, A., Shagin, D., Shelenkov, A., Mikhailova, Y., an In1-like class 1 integron embedded in a complex region Yanushevich, Y., Azizov, I., Hall, R., et al (2019). Structure of containing parts of the Acinetobacter baumannii AbaR the K128 capsular polysaccharide produced by Acinetobacter resistance island. Plasmid, 105, 1-7. [More 485, 1-5. href="http://dx.doi.org/10.1016/j.carres.2019.107814">[More Hamidian, M., Wick, R., Judd, L., Holt, K., Hall, R. (2019). Information] Complete Genome Sequence of A388, an Antibiotic-Resistant Kenyon, J., Arbatsky, N., Shneider, M., Popova, A., Dmitrenok, Acinetobacter baumannii Global Clone 1 Isolate from Greece. A., Kasimova, A., Shashkov, A., Hall, R., Knirel, Y. (2019). Microbiology Resource Announcements, 8(41), 1-2. [More Acinetobacter baumannii NIPH 329 and SDF have related Information] structures and the side-chain non-ulosonic acids are 4-O- Hamidian, M., Hawkey, J., Wick, R., Holt, K., Hall, R. (2019). acetylated by phage-encoded O-acetyltransferases. PloS One, Evolution of a clade of acinetobacter baumannii global clone 1, 14(6), 1-13. [More resistance genes and dispersion of ISAba1. Microbial Information] Genomics, 5(1), 1-13. [More A., Kalinchuk, N., Hall, R., Knirel, Y. (2019). The K5 capsular Information] polysaccharide of the bacterium Acinetobacter baumannii SDF Meumann, E., Anstey, N., Currie, B., Piera, K., Kenyon, J., with the same K unit containing Leg5Ac7Ac as the K7 capsular Hall, R., Davis, J., Sarovich, D. (2019). Genomic epidemiology polysaccharide but a different linkage between the K units. of severe community-onset Acinetobacter baumannii infection. Russian Chemical Bulletin, 68(1), 163-167. [More href="http://dx.doi.org/10.1099/mgen.0.000258">[More Information] Information] Senchenkova, S., Kenyon, J., Jia, T., Popova, A., Shneider, M., Hamidian, M., Wick, R., Hartstein, R., Judd, L., Holt, K., Hall, Kasimova, A., Shashkov, A., Liu, B., Hall, R., Knirel, Y. R. (2019). Insights from the revised complete genome (2019). The K90 capsular polysaccharide produced by sequences of Acinetobacter baumannii strains AB307-0294 and Acinetobacter baumannii LUH5553 contains di-N- ACICU belonging to global clones 1 and 2. Microbial acetylpseudaminic acid and is structurally related to the K7 Genomics, 5(10), 1-9. [More Research, 479, 1-5. href="http://dx.doi.org/10.1016/j.carres.2019.04.008">[More Information] href="http://dx.doi.org/10.1134/S0006297918070064">[More Information] 2018 Hamidian, M., Hall, R. (2018). The AbaR antibiotic resistance Kenyon, J., Kasimova, A., Shashkov, A., Hall, R., Knirel, Y. islands found in Acinetobacter baumannii global clone 1 � (2018). Acinetobacter baumannii isolate BAL_212 from Structure, origin and evolution. Drug Resistance Updates, 41, vietnam produces the K57 capsular polysaccharide containing a 26-39. [More 164(2), 217-220. href="http://dx.doi.org/10.1099/mic.0.000598">[More Information] 2017 Kasimova, A., Kenyon, J., Arbatsky, N., Shashkov, A., Popova, Kenyon, J., Notaro, A., Hsu, L., De Castro, C., Hall, R. (2017). A., Shneider, M., Knirel, Y., Hall, R. (2018). Acinetobacter 5,7-Di-N-acetyl-8-epiacinetaminic acid: A new non-2-ulosonic baumannii K20 and K21 capsular polysaccharide structures acid found in the K73 capsule produced by an Acinetobacter establish roles for UDP-glucose dehydrogenase Ugd2, pyruvyl baumannii isolate from Singapore. Scientific Reports, 7(1), 1-6. transferase Ptr2 and two glycosyltransferases. Glycobiology, [More Information] href="http://dx.doi.org/10.1093/glycob/cwy074">[More Nigro, S., Hall, R. (2017). A large plasmid, pD46-4, carrying a Information] complex resistance region in an extensively antibiotic-resistant Ambrose, S., Harmer, C., Hall, R. (2018). Compatibility and ST25 Acinetobacter baumannii. Journal of Antimicrobial entry exclusion of IncA and IncC plasmids revisited: IncA and Chemotherapy, 72(12), 3496-3498. [More href="http://dx.doi.org/10.1016/j.plasmid.2018.02.002">[More Information] Information] Hamidian, M., Hall, R. (2017). Acinetobacter baumannii ATCC Nigro, S., Wick, R., Holt, K., Hall, R. (2018). Complete 19606 Carries GIsul2 in a Genomic Island Located in the genome sequence of wm99c, an antibiotic-resistant Chromosome. Antimicrobial Agents and Chemotherapy, 61(1), acinetobacter baumannii global clone 2 (gc2) strain representing 1-3. [More an australian gc2 lineage. Microbiology Resource Information] Announcements, 7(22), 1-2. [More B., Popova, A., Arbatsky, N., Miroshnikov, K., Wang, L., Information] Knirel, Y., Hall, R. (2017). Acinetobacter baumannii K11 and Nigro, S., Hall, R. (2018). Does the intrinsic oxaAb (bla OXA- K83 capsular polysaccharides havethe same 6-deoxy-l-talose- 51-like) gene of Acinetobacter baumannii confer resistance to containing pentasaccharide K units butdifferent linkages carbapenems when activated by ISAba1? Journal of between the K units. International Journal of Biological Antimicrobial Chemotherapy, 73(12), 3518-3520. [More href="http://dx.doi.org/10.1016/j.ijbiomac.2017.05.082">[More Information] Information] Ambrose, S., Harmer, C., Hall, R. (2018). Evolution and typing Kenyon, J., Kasimova, A., Notaro, A., Arbatsky, N., Speciale, of IncC plasmids contributing to antibiotic resistance in Gram- I., Shashkov, A., De Castro, C., Hall, R., Knirel, Y. (2017). negative bacteria. Plasmid, 99, 40-55. [More polysaccharides differ only in K-unit side branches of novel Information] non-2-ulosonic acids: di-Nacetylated forms of either acinetaminic acid or 8-epiacinetaminic acid. Carbohydrate Moran, R., Hall, R. (2018). Evolution of Regions Containing Research, 452, 149-155. [More Virulence Plasmids. Microbial Drug Resistance: Mechanisms Information] Epidemiology And Disease, 24(4), 411-421. [More Moran, R., Hall, R. (2017). Analysis of pCERC7, a small Information] antibiotic resistance plasmid from a commensal ST131 Escherichia coli, defines a diverse group of plasmids that Hamidian, M., Hall, R. (2018). Genetic structure of four include various segments adjacent to a multimer resolution site plasmids found in Acinetobacter baumannii isolate D36 and encode the same NikA relaxase accessory protein enabling belonging to lineage 2 of global clone 1. PloS One, 13(9), 1-15. mobilisation. Plasmid, 89, 42-48. [More href="http://dx.doi.org/10.1371/journal.pone.0204357">[More Information] Information] Hamidian, M., Venepally, P., Hall, R., Adams, M. (2017). Shashkov, A., Kenyon, J., Arbatsky, N., Shneider, M., Popova, Corrected genome sequence of Acinetobacter baumannii strain A., Knirel, Y., Hall, R. (2018). Genetics of biosynthesis and AB0057, an antibiotic-resistant isolate from lineage 1 of global structure of the K53 capsular polysaccharide of acinetobacter clone 1. Genome Announcements, 5(35), 1-2. [More Microbiology, 164(10), 1289-1292. href="http://dx.doi.org/10.1099/mic.0.000710">[More Information] Karah, N., Jolley, K., Hall, R., Uhlin, B. (2017). Database for the ampC alleles in Acinetobacter baumannii. PloS One, 12(5), Kasimova, A., Kenyon, J., Arbatsky, N., Shashkov, A., Popova, 1-12. [More Polysaccharide from Acinetobacter baumannii LUH5534 Information] Containing a d-Galactose 4,6-Pyruvic Acid Acetal. Biochemistry (Moscow), 83(7), 831-835. [More href="http://dx.doi.org/10.1016/j.plasmid.2017.10.001">[More Information] Information] 2016 Hamidian, M., Hall, R. (2017). Origin of the AbGRI1 antibiotic resistance island found in the comM gene of Acinetobacter Hamidian, M., Ambrose, S., Hall, R. (2016). A large baumannii GC2 isolates. Journal of Antimicrobial conjugative Acinetobacter baumannii plasmid carrying the sul2 Chemotherapy, 72(10), 2944-2947. [More Plasmid, 87-88, 43-50. href="http://dx.doi.org/10.1016/j.plasmid.2016.09.001">[More Information] Harmer, C., Hamidian, M., Hall, R. (2017). pIP40a, a type 1 IncC plasmid from 1969 carries the integrative element GIsul2 Hamidian, M., Holt, K., Pickard, D., Hall, R. (2016). A small and a novel class II mercury resistance transposon. Plasmid, 92, Acinetobacter plasmid carrying the tet39 tetracycline resistance 17-25. [More 269-271. href="http://dx.doi.org/10.1093/jac/dkv293">[More Information] Moran, R., Anantham, S., Holt, K., Hall, R. (2017). Prediction of antibiotic resistance from antibiotic resistance genes detected Shashkov, A., Kenyon, J., Senchenkova, S., Shneider, M., in antibiotic-resistant commensal Escherichia coli using PCR or Popova, A., Arbatsky, N., Miroshnikov, K., Volozhantsev, N., WGS. Journal of Antimicrobial Chemotherapy, 72(3), 700-704. Hall, R., Knirel, Y. (2016). Acinetobacter baumannii K27 and [More K44 capsular polysaccharides have the same K unit but Information] different structures due to the presence of distinct wzy genes in otherwise closely related K gene clusters. Glycobiology, 26(5), Hamidian, M., Nigro, S., Hall, R. (2017). Problems with the 501-508. [More baumannii: Do Sequence Type 92 (ST92) and ST109 Exist? Information] Journal of Clinical Microbiology, 55(7), 2287-2289. [More Harmer, C., Hamidian, M., Ambrose, S., Hall, R. (2016). Information] Destabilization of IncA and IncC plasmids by SGI1 and SGI2 type Salmonella genomic islands. Plasmid, 87-88, 51-57. [More a multiply antibiotic-resistant Acinetobacter baumannii Information] ST103IP isolate, carries resistance genes in three plasmids, including a novel potentially conjugative plasmid carrying Blackwell, G., Nigro, S., Hall, R. (2016). Evolution of AbGRI2- oxa235 in transposon Tn6252. Journal of Antimicrobial 0, the Progenitor of the AbGRI2 Resistance Island in Global Chemotherapy, 72(7), 1907-1910. [More Chemotherapy, 60(3), 1421-1429. href="http://dx.doi.org/10.1128/AAC.02662-15">[More Information] Hall, R., Schwarz, S. (2017). Resistance gene naming and numbering: Is it a new gene or not?- authors' response. Journal Harmer, C., Hall, R. (2016). IS26-Mediated Formation of of Antimicrobial Chemotherapy, 72(2), 635-635. [More 1(2), 1-8. [More Information] Harmer, C., Hall, R. (2017). Targeted conservative formation of Kenyon, J., Shneider, M., Senchenkova, S., Shashkov, A., cointegrates between two DNA molecules containing IS26 Siniagina, M., Malanin, S., Popova, A., Miroshnikov, K., Hall, occurs via strand exchange at either IS end. Molecular R., Knirel, Y. (2016). K19 capsular polysaccharide of Microbiology, 106(3), 409-418. [More encoded in a small genomic island rather than the KL19 capsule Information] gene cluster. Microbiology, 162(8), 1479-1489. [More Kenyon, J., Kasimova, A., Shneider, M., Shashkov, A., Information] Arbatsky, N., Popova, A., Miroshnikov, K., Hall, R., Knirel, Y. (2017). The KL24 gene cluster and a genomic island encoding a Moran, R., Holt, K., Hall, R. (2016). PCERC3 from a Wzy polymerase contribute genes needed for synthesis of the commensal ST95 Escherichia coli: A ColV virulence- K24 capsular polysaccharide by the multiply antibiotic resistant multiresistance plasmid carrying a sul3-associated class 1 Acinetobacter baumannii isolate RCH51. Microbiology, 163, integron. Plasmid, 84-85, 11-19. [More href="http://dx.doi.org/10.1099/mic.0.000430">[More Information] Information] Harmer, C., Hall, R. (2016). PCR-based typing of IncC Blackwell, G., Hall, R. (2017). The tet39 Determinant and the plasmids. Plasmid, 87-88, 37-42. [More Discrete Modules Flanked by Inversely Oriented pdif (XerC- Information] XerD) Sites. Antimicrobial Agents and Chemotherapy, 61(8), 1- Harmer, C., Partridge, S., Hall, R. (2016). pDGO100, a type 1 9. [More IncC plasmid from 1981 carrying ARI-A and a Tn1696-like Information] transposon in a novel integrating element. Plasmid, 86, 38-45. Blackwell, G., Holt, K., Bentley, S., Hsu, L., Hall, R. (2017). [More antibiotic-resistant Acinetobacter baumannii from Singapore. Information] Shashkov, A., Kenyon, J., Arbatsky, N., Shneider, M., Popova, Antibiotic-Resistant Global Clone 1. Genome Announcements, A., Miroshnikov, K., Hall, R., Knirel, Y. (2016). Related 3(2), 1-2. [More Information] baumannii isolates that carry related capsule gene clusters Hamidian, M., Hawkey, J., Holt, K., Hall, R. (2015). Genome KL43, KL47, and KL88. Carbohydrate Research, 435, 173- sequence of Acinetobacter baumannii strain D36, an antibiotic- 179. [More Announcements, 3(6), 1-2. href="http://dx.doi.org/10.1128/genomeA.01478-15">[More Hall, R., Schwarz, S. (2016). Resistance gene naming and Information] numbering: is it a new gene or not? Journal of Antimicrobial Hamidian, M., Holt, K., Hall, R. (2015). Genomic resistance Chemotherapy, 71(6), 569-571. [More antibiotic-resistant ST25 Acinetobacter baumannii isolate. Information] Journal of Antimicrobial Chemotherapy, 70(9), 2519-2523. [More numbering: Is it a new gene or not?-authors' response. Journal Information] of Antimicrobial Chemotherapy, 71(6), 1743. [More the IS26-aphA1a Translocatable Unit. mBio, 6(6), 1-9. href="http://dx.doi.org/10.1128/mBio.01866-15">[More Nigro, S., Hall, R. (2016). Structure and Context of Information] acinetobacter transposons carrying the oxa23 carbapenemase Hawkey, J., Hamidian, M., Wick, R., Edwards, D., Billman- gene. Journal of Antimicrobial Chemotherapy, 71(5), 1135- Jacobe, H., Hall, R., Holt, K. (2015). ISMapper: Identifying 1147. [More transposase insertion sites in bacterial genomes from short read Information] sequence data. BMC Genomics, 16(1), 1-11. [More Structure of repeating unit of the capsular polysaccharide from Information] Acinetobacter baumannii D78 and assignment of the K4 gene Anantham, S., Harmer, C., Hall, R. (2015). p39R861-4, A Type cluster. Carbohydrate Research, 434, 12-17. [More RA1. Microbial Drug Resistance: Mechanisms Epidemiology Information] And Disease, 21(6), 571-576. [More of D4, a multiply antibiotic-resistant ST25 Acinetobacter Information] baumannii isolate, resides in two genomic islands and a Moran, R., Anantham, S., Pinyon, J., Hall, R. (2015). Plasmids plasmid. Journal of Antimicrobial Chemotherapy, 71(6), 1730- in antibiotic susceptible and antibiotic resistant commensal 1741. [More Escherichia coli from healthy Australian adults. Plasmid, 80, 24- Information] 31. [More Information] Kenyon, J., Marzaioli, A., De Castro, C., Hall, R. (2015). 5,7-di- Kenyon, J., Hall, R., De Castro, C. (2015). Structural N-acetyl-acinetaminic acid: A novel non-2-ulosonic acid found determination of the K14 capsular polysaccharide from an ST25 in the capsule of an Acinetobacter baumannii isolate. Acinetobacter baumannii isolate, D46. Carbohydrate Research, Glycobiology, 25(6), 644-654. [More href="http://dx.doi.org/10.1016/j.carres.2015.09.002">[More Information] Information] Harmer, C., Holt, K., Hall, R. (2015). A type 2 A/C2 plasmid Kenyon, J., Marzaioli, A., Hall, R., De Castro, C. (2015). carrying the aacC4 apramycin resistance gene and the erm(42) Structure of the K12 capsule containing 5,7-di-N- erythromycin resistance gene recovered from two Salmonella acetylacinetaminic acid from Acinetobacter baumannii isolate enterica serovars. Journal of Antimicrobial Chemotherapy, 70, D36. Glycobiology, 25(8), 881-887. [More href="http://dx.doi.org/10.1093/jac/dku489">[More Information] Information] Kenyon, J., Marzaioli, A., Hall, R., De Castro, C. (2015). Nigro, S., Holt, K., Pickard, D., Hall, R. (2015). Carbapenem Structure of the K6 capsular polysaccharide from Acinetobacter and amikacin resistance on a large conjugative Acinetobacter baumannii isolate RBH4. Carbohydrate Research, 409, 30-35. baumannii plasmid. Journal of Antimicrobial Chemotherapy, [More href="http://dx.doi.org/10.1093/jac/dku486">[More Information] Information] Harmer, C., Hall, R. (2015). The A to Z of A/C plasmids. Nigro, S., Hall, R. (2015). Distribution of the blaOXA-23- Plasmid, 80, 63-82. [More carbapenem-resistant Acinetobacter baumannii isolates. Journal Information] of Antimicrobial Chemotherapy, 70(8), 2409-2411. [More Hamidian, M., Hall, R., Holt, K. (2015). The complete Information] sequence of Salmonella genomic island SGI1-K. Journal of Antimicrobial Chemotherapy, 70(1), 305-306. [More Pickard, D., Hall, R. (2015). Genome Sequence of Information] Acinetobacter baumannii Strain A1, an Early Example of Hamidian, M., Holt, K., Hall, R. (2015). The complete cluster of Acinetobacter baumannii. Glycobiology, 24(6), 554- sequence of Salmonella genomic island SGI2. Journal of 563. [More href="http://dx.doi.org/10.1093/jac/dku407">[More Information] Information] Hamidian, M., Hall, R. (2014). Tn6168, a transposon carrying 2014 an ISAba1-activated ampC gene and conferring cephalosporin resistance in Acinetobacter baumannii. Journal of Antimicrobial Hamidian, M., Kenyon, J., Holt, K., Pickard, D., Hall, R. Chemotherapy, 69(1), 77-80. [More resistance gene blaOXA-23 in AbaR4 in an extensively Information] resistant GC1 Acinetobacter baumannii isolate. Journal of Kenyon, J., Nigro, S., Hall, R. (2014). Variation in the OC Antimicrobial Chemotherapy, 69(10), 2625-2628. [More structural diversity in the lipooligosaccharide. PloS One, 9(9), 1- Information] 12. [More (2014). A GC1 Acinetobacter baumannii isolate carrying Information] AbaR3 and the aminoglycoside resistance transposon TnaphA6 in a conjugative plasmid. Journal of Antimicrobial 2013 Chemotherapy, 69(4), 955-958. [More family of genomic resistance islands, AbGRI2, contributing to Information] aminoglycoside resistance in Acinetobacter baumannii isolates Nigro, S., Hall, R. (2014). Amikacin resistance plasmids in belonging to global clone 2. Journal of Antimicrobial extensively antibiotic-resistant GC2 Acinetobacter baumannii Chemotherapy, 68(3), 554-557. [More Chemotherapy, 69(12), 3435-3457. href="http://dx.doi.org/10.1093/jac/dku310">[More Cain, A., Hall, R. (2013). Evolution of IncHI1 plasmids: Two Information] distinct lineages. Plasmid, 70(2), 201-208. [More Hall, R. (2014). Identification of a marker for two lineages Information] within the GC1 clone of Acinetobacter baumannii. Journal of Hamidian, M., Hancock, D., Hall, R. (2013). Horizontal transfer Antimicrobial Chemotherapy, 69(2), 557-558. [More baumannii strains leading to cephalosporin resistance. Journal Information] of Antimicrobial Chemotherapy, 68(1), 244-245. [More Insertions in the OCL1 locus of Acinetobacter baumannii lead Information] to shortened lipooligosaccharides. Research in Microbiology, Hamidian, M., Hall, R. (2013). ISAba1 targets a specific 165(6), 472-475. [More baumannii leading to cephalosporin resistance. Journal of Information] Antimicrobial Chemotherapy, 68(11), 2682-2683. [More Associated Antibiotic Resistance Genes Occurs via a Information] Translocatable Unit That Includes a Single IS26 and Kenyon, J., Hall, R. (2013). Variation in the Complex Preferentially Inserts Adjacent to Another IS26. mBio, 5(5), 1- Carbohydrate Biosynthesis Loci of Acinetobacter baumannii 10. [More Genomes. PloS One, 8(4), 1-12. href="http://dx.doi.org/10.1371/journal.pone.0062160">[More Hamidian, M., Hall, R. (2014). pACICU2 is a conjugative Information] plasmid of Acinetobacter carrying the aminoglycoside resistance transposon TnaphA6. Journal of Antimicrobial 2012 Chemotherapy, 69(4), 1146-1148. [More resistant Acinetobacter baumannii isolate belonging to global Information] clone 1 from an Australian hospital--author's response. Journal Harmer, C., Hall, R. (2014). pRMH760, a Precursor of A/C2 of Antimicrobial Chemotherapy, 67(2), 513-514. [More Drug Resistance: Mechanisms Epidemiology And Disease, Information] 20(5), 416-423. [More (RUH134), the reference strain for Acinetobacter baumannii Information] global clone 2. Journal of Antimicrobial Chemotherapy, 67(2), Hamidian, M., Hall, R. (2014). Resistance to third-generation 335-338. [More cephalosporins in Acinetobacter baumannii due to horizontal Information] transfer of a chromosomal segment containing ISAba1-ampC. Post, V., Hamidian, M., Hall, R. (2012). Antibiotic-resistant Journal of Antimicrobial Chemotherapy, 69(10), 2865-2866. [More Journal of Antimicrobial Chemotherapy, 67, 1039-1049. href="http://dx.doi.org/10.1093/jac/dkr586">[More Kenyon, J., Marzaioli, A., Hall, R., De Castro, C. (2014). Information] Structure of the K2 capsule associated with the KL2 gene Hall, R., Cain, A. (2012). Comment on: Nucleotide sequence of the chromosomal region conferring multidrug resistance (R- href="http://dx.doi.org/10.1089/mdr.2010.0196">[More type ASSuT) in Salmonella Typhimurium and monophasic Information] Salmonella Typhimurium strains. Journal of Antimicrobial Nigro, S., Hall, R. (2011). GIsul2, a genomic island carrying the Chemotherapy, 67(3), 785-785. [More element CR2 found in the Enterobacter cloacae subspecies Information] cloacae type strain ATCC 13047 from 1890, Shigella flexneri Cain, A., Hall, R. (2012). Evolution of a multiple antibiotic ATCC 700930 from 1954 and Acinetobacter baumannii ATCC resistance region in IncHI1 plasmids: reshaping resistance 17978 from 1951. Journal of Antimicrobial Chemotherapy, regions in situ. Journal of Antimicrobial Chemotherapy, 67(12), 66(9), 2175-2191. [More href="http://dx.doi.org/10.1093/jac/dks317">[More Information] Information] Nigro, S., Post, V., Hall, R. (2011). The multiresistant Cain, A., Hall, R. (2012). Evolution of IncHI2 plasmids via Acinetobacter baumannii European clone I type strain RUH875 acquisition of transposons carrying antibiotic resistance (A297) carries a genomic antibiotic resistance island AbaR11, determinants. Journal of Antimicrobial Chemotherapy, 67(5), plasmid pRAY and a cluster containing ISAba1-sul2-CR2-strB- 1121-1127. [More 1930. [More Information] Information] Hall, R. (2012). Integrons and gene cassettes: hotspots of Cain, A., Hall, R. (2011). Transposon Tn5393e Carrying the diversity in bacterial genomes. Annals of the New York aphA1-Containing Transposon Tn6023 Upstream of strAB Academy of Sciences, 1267 (1), 71-78. [More Information] 394. [More Information] Anantham, S., Hall, R. (2012). pCERC1, a Small, Globally Disseminated Plasmid Carrying the dfrA14 Cassette in the strA 2010 Gene of the sul2-strA-strB Gene Cluster. Microbial Drug Resistance: Mechanisms Epidemiology And Disease, 18(4), 364- Bailey (nee Patterson), J., Pinyon, J., Anantham, S., Hall, R. 371. [More (2010). Commensal Escherichia coli of healthy humans - a Information] reservoir for antibiotic-resistance determinants. Journal of Medical Microbiology, 59(11), 1331-1339. [More island in an Australian carbapenem-resistant Acinetobacter Information] baumannii GC2, ST92 isolate. Journal of Antimicrobial Chemotherapy, 67(6), 1342-1346. [More Distribution of Phylogenetic Groups in Human Commensal Information] Escherichia coli. Journal of Clinical Microbiology, 48(9), 3455- 6. [More Hamidian, M., Nigro, S., Hall, R. (2012). Variants of the Information] gentamicin and tobramycin resistance plasmid pRAY are widely distributed in Acinetobacter. Journal of Antimicrobial Post, V., White, P., Hall, R. (2010). Evolution of AbaR-type Chemotherapy, 67(12), 2833-2836. [More Acinetobacter baumannii. Journal of Antimicrobial Information] Chemotherapy, 65(6), 1162-1170. [More 2011 Information] Hamidian, M., Hall, R. (2011). AbaR4 replaces AbaR3 in a Yau, S., Liu, X., Djordjevic, S., Hall, R. (2010). RSF1010-Like carbapenem-resistant Acinetobacter baumannii isolate Plasmids in Australian Salmonella enterica Serovar belonging to global clone 1 from an Australian hospital. Typhimurium and Origin of Their sul2-strA-strB Antibiotic Journal of Antimicrobial Chemotherapy, 66(11), 2484-2491. [More Mechanisms Epidemiology And Disease, 16(4), 249-252. href="http://dx.doi.org/10.1089/mdr.2010.0033">[More Information] Nigro, S., Post, V., Hall, R. (2011). Aminoglycoside resistance in multiply antibiotic-resistant Acinetobacter baumannii Hall, R. (2010). Salmonella genomic islands and antibiotic belonging to global clone 2 from Australian hospitals. Journal resistance in Salmonella enterica. Future Microbiology, 5(10), of Antimicrobial Chemotherapy, 66(7), 1504-1509. [More href="http://dx.doi.org/10.2217/fmb.10.122">[More Information] Information] Bailey (nee Patterson), J., Pinyon, J., Anantham, S., Hall, R. Cain, A., Liu, X., Djordjevic, S., Hall, R. (2010). Transposons (2011). Distribution of the blaTEM gene and blaTEM- Related to Tn1696 in IncHI2 Plasmids in Multiply Antibiotic containing transposons in commensal Escherichia coli. Journal Resistant Salmonella enterica Serovar Typhimurium from of Antimicrobial Chemotherapy, 66(4), 745-751. [More Epidemiology And Disease, 16(3), 197-202. href="http://dx.doi.org/10.1089/mdr.2010.0042">[More Information] Pinyon, J., Hall, R. (2011). Evolution of IncP-1alpha Plasmids by Acquisition of Antibiotic and Mercuric Ion Resistance Wilson, N., Hall, R. (2010). Unusual Class 1 Integron Transposons. Microbial Drug Resistance: Mechanisms Configuration found in Salmonella Genomic Island 2 from Epidemiology And Disease, 17(3), 339-343. [More Paratyphi B. Emerging Infectious Diseases, 12(3), 507-510. href="http://dx.doi.org/10.3201/eid1203.051085">[More Information] 2009 Elbourne, L., Hall, R. (2006). Gene cassette encoding a 3-N- Post, V., Hall, R. (2009). AbaR5, a large multiple-antibiotic aminoglycoside acetyltransferase in a chromosomal integron. resistance region found in Acinetobacter baumannii. Antimicrobial Agents and Chemotherapy, 50(6), 2270-2271. [More href="http://dx.doi.org/10.1128/AAC.01407-08">[More Information] Information] Hall, R., Levings, R., Lightfoot, D., Djordjevic, S. (2006). New Djordjevic, S., Cain, A., Evershed, N., Falconer, L., Levings, integron gene cassette linG encoding a lincosamide R., Lightfoot, D., Hall, R. (2009). Emergence and evolution of nucleotidyltransferase. Antimicrobial Agents and multiply antibiotic-resistant Salmonella enterica serovar Chemotherapy, 50, 3514-3515. [More Antimicrobial Agents and Chemotherapy, 53(6), 2319-2326. href="http://dx.doi.org/10.1128/AAC.01532-08">[More Levings, R., Lightfoot, D., Elbourne, L., Djordjevic, S., Hall, R. Information] (2006). New Integron-Associated Gene Cassette Encoding a Post, V., Hall, R. (2009). Insertion sequences in the IS1111 Trimethoprim-Resistant DfrB-Type Dihydrofolate Reductase. family that target the attC recombination sites of integron- Antimicrobial Agents and Chemotherapy, 50(8), 2863-2865. [More 182-187. [More Information] 2005 Evershed, N., Levings, R., Wilson, N., Djordjevic, S., Hall, R. (2009). Unusual class 1 integron-associated gene cassette Partridge, S., Hall, R. (2005). Correctly identifying the configuration found in IncA/C plasmids from Salmonella streptothricin resistance gene cassette. Journal of Clinical enterica. Antimicrobial Agents and Chemotherapy, 53(6), 2640- Microbiology, 43(8), 4298-4300. [More Information] 4300.2005">[More Information] 2008 Partridge, S., Hall, R. (2005). Evolution of transposons containing blaTEM genes. Antimicrobial Agents and Levings, R., Djordjevic, S., Hall, R. (2008). SGI2, a Relative of Chemotherapy, 49(3), 1267-1268. [More Information] 2537. [More Information] containing blaTEM genes. Antimicrobial Agents and 2007 Chemotherapy, 49(3), 1267-8. [More Information] cassettes in Tn402-like class 1 integrons. Antimicrobial Agents and Chemotherapy, 51(9), 3467-3468. [More encoding fosfomycin resistance. Antimicrobial Agents and Information] Chemotherapy, 49(2), 860-861. [More Information] K, a Variant of the SGI1 Genomic Island Carrying a Mercury Resistance Region, in Salmonella enterica Serovar Kentucky. Partridge, S., Hall, R. (2005). Gene cassettes potentially Antimicrobial Agents and Chemotherapy, 51(1), 317-323. [More Agents and Chemotherapy, 49(2), 860-1. href="http://dx.doi.org/10.1128/AAC.49.2.860- 861.2005">[More Information] Hall, R. (2007). The antibiotic resistance gene cluster of pAPEC-O1-R. Antimicrobial Agents and Chemotherapy, 51(9), Levings, R., Partridge, S., Lightfoot, D., Hall, R., Djordjevic, S. 3461-3462. [More Information] aminoglycoside acetyltransferase. Antimicrobial Agents and Chemotherapy, 49(3), 1238-1241. [More Information] transposons. Antimicrobial Agents and Chemotherapy, 51(5), 1827-1829. [More Information] Recombination between the dfrA12-orfF-aadA2 cassette array and an aadA1 gene cassette creates a hybrid cassette, aadA8b. Hall, R., Holmes, A., Roy, P., Stokes, H. (2007). What are Antimicrobial Agents and Chemotherapy, 49(11), 4771-4. [More Information] href="http://dx.doi.org/10.1038/nrmicro1462-c1">[More Information] Levings, R., Lightfoot, D., Partridge, S., Hall, R., Djordjevic, S. (2005). The Genomic Island SGI1, Containing the Multiple 2006 Antibiotic Resistance Region of Salmonella enterica Serovar Typhimurium DT104 or Variants of It, Is Widely Distributed in Levings, R., Lightfoot, D., Hall, R., Djordjevic, S. (2006). Other S. enterica Serovars. Journal of Bacteriology, 187(13), 4401-4409. [More Information] and Chemotherapy, 46(6), 2058-2059. 2004 Collis, C., Kim, M., Stokes, H., Hall, R. (2002). Integron- encoded IntI integrases preferentially recognize the adjacent Collis, C., Hall, R. (2004). Comparison of the structure-activity cognate attI site in recombination with a 59-be site. Molecular relationships of the integron-associated recombination sites Microbiology, 46(5), 1415-1427. [More Information] 0">[More Information] 2001 Partridge, S., Hall, R. (2004). Complex Multiple Antibiotic And Mercury Resistance Region Derived From The R-Det Of NR1 Collis, C., Recchia, G., Kim, M., Stokes, H., Hall, R. (2001). (R100). Antimicrobial Agents and Chemotherapy, 48(11), 4250- Efficiency of recombination reactions catalyzed by the class 1 4255. [More Information] 2542. Hall, R., Stokes, H. (2004). Integrons or super integrons? Hall, R., Partridge, S. (2001). Evolution of multiple antibiotic Microbiology, 150(1), 3-4. [More Andersson (Eds.), Antibiotic Development and Resistance, (pp. Information] 37-51). United States: CRC Press. 2003 Partridge, S., Recchia, G., Stokes, H., Hall, R. (2001). Family of Class 1 Integrons Related to In4 from Tn1696. Antimicrobial Partridge, S., Hall, R. (2003). In34, a Complex In5 Family Agents and Chemotherapy, 45(11), 3014-3020. Class 1 Integron Containing orf513 and dfrA10. Antimicrobial Hall, R. (2001). Gene cassettes. (pp. 771-774). Agents and Chemotherapy, 47(1), 342-349. [More Information] Hall, R., Collis, C. (2001). Origins and evolution of antibiotic Partridge, S., Hall, R. (2003). The IS1111 family members and multiple antibiotic resistance in bacteria. In K. Lohner IS4321 and IS5075 have sub-terminal inverted repeats and (Eds.), Development of Novel Antimicrobial Agents: Emerging target the terminal inverted repeats of Tn21 family transposons. Strategies, (pp. 17-30). UK: Horizon Scientific Press. Journal of Bacteriology, 185(21), 6371-6384. [More Information] Transposons Tn1696 and Tn21 and their integrons In4 and In2 have independent origins. Antimicrobial Agents and Hall, R., Partridge, S. (2003). Unambiguous Numbering of Chemotherapy, 45(4), 1263-1270. Antibiotic Resistance Genes (Letter to the Editor). Antimicrobial Agents and Chemotherapy, 47(12), 3998-3999. [More Information] 2002 Partridge, S., Brown, H., Hall, R. (2002). Characterization and movement of the class 1 integron known as Tn2521 and Tn1405. Antimicrobial Agents and Chemotherapy, 46(5), 1288- 1294. [More Information] Collis, C., Kim, M., Partridge, S., Stokes, H., Hall, R. (2002). Characterization of the class 3 integron and the site-specific recombination system it determines. Journal of Bacteriology, 184(11), 3017-3026. [More Information] Partridge, S., Collis, C., Hall, R. (2002). Class 1 Integron Containing a New Gene Cassette, aadA10, associated with Tn1404 from R151. Antimicrobial Agents and Chemotherapy, 46, 2400-2408. [More Information] George, A., Hall, R. (2002). Efflux of chloramphenicol by the CmlA1 protein. FEMS Microbiology Letters, 209, 209-213. [More Information] Hall, R. (2002). Gene cassettes and integrons; moving single genes. In M. Syvanan and C. Kado (Eds.), Horizontal Gene Transfer, (pp. 19-28). London: Academic Press. Hall, R., Stokes, H., Partridge, S. (2002). Integration of