Methane Clumped Isotopes: Progress and Potential for a New Isotopic Tracer ⇑ Peter M.J
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Abundances of Isotopologues and Calibration of CO2 Greenhouse Gas Measurements Pieter P
Atmos. Meas. Tech. Discuss., doi:10.5194/amt-2017-34, 2017 Manuscript under review for journal Atmos. Meas. Tech. Discussion started: 14 February 2017 c Author(s) 2017. CC-BY 3.0 License. Abundances of isotopologues and calibration of CO2 greenhouse gas measurements Pieter P. Tans1,3, Andrew M. Crotwell2,3, and Kirk W. Thoning1,3 1Global Monitoring Division, Earth System Research Laboratory, National Oceanic and Atmospheric 5 Administration, Boulder, Colorado, 80305, USA. 2Cooperative Institute for Research in Environmental Sciences, University of Colorado, Boulder, Colorado, 80309, USA. 3Central Calibration Laboratory, World Meteorological Organization Global Atmosphere Watch program (WMO/GAW) 10 Correspondence to: Pieter Tans ([email protected]) Abstract We have developed a method to calculate the fractional distribution of CO2 across all of its component isotopologues based on measured δ13C and δ18O values. The fractional distribution can be used with known total CO2 to calculate each component isotopologue individually, in units of mole fraction. The technique is applicable to 15 any molecule where isotopologue-specific values are desired. We used it with a new CO2 calibration system to account for isotopic differences among the primary CO2 standards that define the WMO X2007 CO2 in air calibration scale and between the primary standards and standards in subsequent levels of the calibration hierarchy. The new calibration system uses multiple laser spectroscopic techniques to measure amount of substance fractions 16 12 16 16 13 16 18 12 16 (in mole fraction units) of the three major CO2 isotopologues ( O C O, O C O, and O C O) individually. 20 The three measured values are then combined into total CO2 (accounting for the rare unmeasured isotopologues), 13 18 δ C, and δ O values. -
Geochemistry and Petrology of Listvenite in the Samail Ophiolite, Sultanate of Oman: Complete Carbonation of Peridotite During Ophiolite Emplacement
Available online at www.sciencedirect.com ScienceDirect Geochimica et Cosmochimica Acta 160 (2015) 70–90 www.elsevier.com/locate/gca Geochemistry and petrology of listvenite in the Samail ophiolite, Sultanate of Oman: Complete carbonation of peridotite during ophiolite emplacement Elisabeth S. Falk ⇑, Peter B. Kelemen Lamont-Doherty Earth Observatory, Columbia University, Palisades, NY 10964, USA Received 16 May 2014; accepted in revised form 14 March 2015; available online 20 March 2015 Abstract Extensive outcrops of listvenite—fully carbonated peridotite, with all Mg in carbonate minerals and all Si in quartz—occur along the basal thrust of the Samail ophiolite in Oman. These rocks can provide insight into processes including (a) carbon fluxes at the “leading edge of the mantle wedge” in subduction zones and (b) enhanced mineral carbonation of peridotite as a means of carbon storage. Here we examine mineralogical, chemical and isotopic evidence on the temperatures, timing, and fluid compositions involved in the formation of this listvenite. The listvenites are composed primarily of magnesite and/or dolomite + quartz + relict Cr-spinel. In some instances the conversion of peridotite to listvenite is nearly isochemical except for the addition of CO2, while other samples have also seen significant calcium addition and/or variable, minor addition of K and Mn. Along margins where listvenite bodies are in contact with serpentinized peridotite, talc and antigorite are present in addition to carbonate and quartz. The presence of antigorite + quartz + talc in these samples implies temperatures of 80– 130 °C. This range of temperature is consistent with dolomite and magnesite clumped isotope thermometry in listvenite (aver- age T = 90 ± 15 °C) and with conventional mineral-water oxygen isotope exchange thermometry (assuming fluid d18O near zero). -
Detection of Deuterated Methylcyanoacetylene, CH $ 2
Astronomy & Astrophysics manuscript no. AA202141371_Cabezas ©ESO 2021 June 8, 2021 Detection of deuterated methylcyanoacetylene, CH2DC3N, in TMC-1 ? C. Cabezas1, E. Roueff2, B. Tercero3; 4, M. Agúndez1, N. Marcelino1, P. de Vicente3 and J. Cernicharo1 1 Grupo de Astrofísica Molecular, Instituto de Física Fundamental (IFF-CSIC), C/ Serrano 121, 28006 Madrid, Spain. e-mail: [email protected]; [email protected] 2 LERMA, Observatoire de Paris, PSL Research University, CNRS, Sorbonne Universités, 92190 Meudon, France 3 Observatorio Astronómico Nacional (IGN), C/ Alfonso XII, 3, 28014, Madrid, Spain. 4 Centro de Desarrollos Tecnológicos, Observatorio de Yebes (IGN), 19141 Yebes, Guadalajara, Spain. Received; accepted ABSTRACT We report the first detection in space of the single deuterated isotopologue of methylcyanoacetylene, CH2DC3N. A total of fifteen rotational transitions, with J = 8-12 and Ka = 0 and 1, were identified for this species in TMC-1 in the 31.0-50.4 GHz range using the Yebes 40m radio telescope. The observed frequencies were used to derive for the first time the spectroscopic parameters of this 10 −2 deuterated isotopologue. We derive a column density of (8:0±0:4)×10 cm . The abundance ratio between CH3C3N and CH2DC3N 13 is ∼22. We also theoretically computed the principal spectroscopic constants of C isotopologues of CH3C3N and CH3C4H and those of the deuterated isotopologues of CH3C4H for which we could expect a similar degree of deuteration enhancement. However, we 13 have not detected either CH2DC4H nor CH3C4D nor any C isotopologue. The different observed deuterium ratios in TMC-1 are reasonably accounted for by a gas phase chemical model where the low temperature conditions favor deuteron transfer through + reactions with H2D . -
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UC Berkeley UC Berkeley Previously Published Works Title Constraints on the formation and diagenesis of phosphorites using carbonate clumped isotopes Permalink https://escholarship.org/uc/item/5dm6b94h Authors Stolper, DA Eiler, JM Publication Date 2016-05-15 DOI 10.1016/j.gca.2016.02.030 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Constraints on the formation and diagenesis of phosphorites using carbonate clumped isotopes Author links open overlay panel Daniel A.Stolper a1 John M.Eiler a Show more https://doi.org/10.1016/j.gca.2016.02.030 Get rights and content Abstract The isotopic composition of apatites from sedimentary phosphorite deposits has been used previously to reconstruct ancient conditions on the surface of the Earth. However, questions remain as to whether these minerals retain their original isotopic composition or are modified during burial and lithification. To better understand how apatites in phosphorites form and are diagenetically modified, we present new isotopic 18 measurements of δ O values and clumped-isotope-based (Δ47) temperatures of carbonate groups in apatites from phosphorites from the past 265 million years. We compare these measurements to previously measured δ18O values of phosphate groups from the same apatites. These results indicate that the isotopic composition of many of the apatites do not record environmental conditions during formation but instead diagenetic conditions. To understand these results, we construct a model that describes the consequences of diagenetic modification of phosphorites as functions of the environmental conditions (i.e., temperature and δ18O values of the fluids) during initial precipitation and subsequent diagenesis. -
Carbonate Clumped Isotope (47) Evidence from the Tornillo Basin, Te
Paleoceanography and Paleoclimatology RESEARCH ARTICLE Warm Terrestrial Subtropics During the Paleocene and Eocene: 10.1029/2018PA003391 Carbonate Clumped Isotope (Δ47) Evidence From the Tornillo Special Section: Basin, Texas (USA) Climatic and Biotic Events of the Paleogene: Earth Systems Julia R. Kelson1 , Dylana Watford2, Clement Bataille3 , Katharine W. Huntington1 , and Planetary Boundaries in a Ethan Hyland4 , and Gabriel J. Bowen2 Greenhouse World 1Department of Earth and Space Sciences and Quaternary Research Center, University of Washington, Seattle, WA, USA, 2 3 Key Points: Department of Geology and Geophysics, University of Utah, Salt Lake City, UT, USA, Department of Earth and • Paleosol carbonate nodules from the Environmental Sciences, University of Ottawa, Ottawa, ON, Canada, 4Department of Marine, Earth, and Atmospheric Tornillo Basin record primary Sciences, NC State University, Raleigh, NC, USA environmental values of carbon, oxygen, and clumped isotopes • Carbonate nodules record average Abstract Records of subtropical climate on land from the early Paleogene offer insights into how the Earth clumped isotope temperatures of 25 ± 4 and 32 ± 2 °C for the system responds to greenhouse climate conditions. Fluvial and floodplain deposits of the Tornillo Basin (Big Paleocene and early Eocene, Bend National Park, Texas, USA) preserve a record of environmental and climatic change of the Paleocene respectively and the early Eocene. We report carbon, oxygen, and clumped isotopic compositions (δ13C, δ18O, and Δ )of • These temperature estimates are 47 lower than model predictions, and paleosol carbonate nodules from this basin. Mineralogical, geochemical, and thermal modeling evidence data-model discrepancies remain at suggests that the measured isotopic values preserve primary environmental signals with a summer bias with low latitudes for the Eocene the exception of data from two nodules reset by local igneous intrusions. -
Isotopic Fractionation of Carbon, Deuterium, and Nitrogen: a Full Chemical Study?
A&A 576, A99 (2015) Astronomy DOI: 10.1051/0004-6361/201425113 & c ESO 2015 Astrophysics Isotopic fractionation of carbon, deuterium, and nitrogen: a full chemical study? E. Roueff1;2, J. C. Loison3, and K. M. Hickson3 1 LERMA, Observatoire de Paris, PSL Research University, CNRS, UMR8112, Place Janssen, 92190 Meudon Cedex, France e-mail: [email protected] 2 Sorbonne Universités, UPMC Univ. Paris 6, 4 Place Jussieu, 75005 Paris, France 3 ISM, Université de Bordeaux – CNRS, UMR 5255, 351 cours de la Libération, 33405 Talence Cedex, France e-mail: [email protected] Received 6 October 2014 / Accepted 5 January 2015 ABSTRACT Context. The increased sensitivity and high spectral resolution of millimeter telescopes allow the detection of an increasing number of isotopically substituted molecules in the interstellar medium. The 14N/15N ratio is difficult to measure directly for molecules con- taining carbon. Aims. Using a time-dependent gas-phase chemical model, we check the underlying hypothesis that the 13C/12C ratio of nitriles and isonitriles is equal to the elemental value. Methods. We built a chemical network that contains D, 13C, and 15N molecular species after a careful check of the possible fraction- ation reactions at work in the gas phase. Results. Model results obtained for two different physical conditions that correspond to a moderately dense cloud in an early evolu- tionary stage and a dense, depleted prestellar core tend to show that ammonia and its singly deuterated form are somewhat enriched 15 14 15 + in N, which agrees with observations. The N/ N ratio in N2H is found to be close to the elemental value, in contrast to previous 15 + models that obtain a significant enrichment, because we found that the fractionation reaction between N and N2H has a barrier in + 15 + + 15 + the entrance channel. -
Carbonate Clumped Isotope Thermometry in Continental Tectonics
Tectonophysics 647–648 (2015) 1–20 Contents lists available at ScienceDirect Tectonophysics journal homepage: www.elsevier.com/locate/tecto Invited Review Carbonate clumped isotope thermometry in continental tectonics Katharine W. Huntington a,⁎, Alex R. Lechler a,b a Department of Earth and Space Sciences, University of Washington, Johnson Hall Rm-070, Box 351310, 4000 15th Avenue NE, Seattle, WA 98195-1310, United States b Department of Geosciences, Pacific Lutheran University, Rieke Rm-158, Tacoma, WA 98447-0003, United States article info abstract Article history: Reconstructing the thermal history of minerals and fluids in continental environments is a cornerstone of tecton- Received 22 July 2014 ics research. Paleotemperature constraints from carbonate clumped isotope thermometry have provided impor- Received in revised form 18 December 2014 tant tests of geodynamic, structural, topographic and basin evolution models. The thermometer is based on the Accepted 22 February 2015 13 18 C– O bond ordering in carbonates (mass-47 anomaly, Δ47) and provides estimates of the carbonate formation Available online 28 February 2015 18 temperature independent of the δ O value of the water from which the carbonate grew; Δ47 is measured δ13 δ18 Keywords: simultaneously with conventional measurements of carbonate Cand O values, which together constrain Clumped isotope thermometry the isotopic composition of the parent water. Depending on the geologic setting of carbonate growth, this infor- Carbonate mation can help constrain paleoenvironmental conditions or basin temperatures and fluid sources. This review Paleoelevation examines how clumped isotope thermometry can shed new light on problems in continental tectonics, focusing Digenesis on paleoaltimetry, basin evolution and structural diagenesis applications. -
Mass Spectrometric Separation and Quantitation of Overlapping Isotopologues
Mass Spectrometric Separation and Quantitation of Overlapping Isotopologues. H2O/HOD/D2O and H2Se/HDSe/D2Se Mixtures Juris Meija and Zoltan Mester Institute for National Measurement Standards, National Research Council Canada, Ottawa, Ontario, Canada Alessandro D’Ulivo Laboratory of Instrumental Analytical Chemistry, Institute for Chemical and Physical Processes, Research area of Pisa, National Research Council of Italy, Pisa, Italy Three conceptually different mathematical methods are presented for accurate mass spectro- metric determination of H2O/HOD/D2O and H2Se/HDSe/D2Se concentrations from mix- tures. These are alternating least-squares, weighted two-band target entropy minimization, and a statistical mass balance model. The otherwise nonmeasurable mass spectra of partially deuterated isotopologues (HOD and HDSe) are mathematically constructed. Any recorded isotopologue mixture mass spectra are then deconvoluted by least-squares into their compo- nents. This approach is used to study the H2O/D2O exchange reaction, and is externally validated gravimetrically. The H2O/D2O exchange equilibrium constant is also measured from the deconvoluted 70 eV electron impact GC/MS data (K ϭ 3.85 Ϯ 0.03). (J Am Soc Mass Spectrom 2006, 17, 1028–1036) © 2006 American Society for Mass Spectrometry ` ϩ sotopologues are compounds that differ in isotopic rapid isotope-exchange equilibrium 2HOD H2O composition only, such as H2O and D2O. These com- D2O. Ipounds play an important role in analytical chemistry, Using the best available commercial high-resolution especially in quantitative analysis where most of the mass spectrometers, one can possibly address the H2O/ ⌬ Ͼ modern internal quantitation methods are based on isoto- HOD/D2O system (requiring m/ m 12,000 to fully ϩ ·ϩ pologues. -
A Novel High-Mass Resolution Gas-Source Mass Spectrometer Facility at Ucla
47th Lunar and Planetary Science Conference (2016) 2238.pdf A NOVEL HIGH-MASS RESOLUTION GAS-SOURCE MASS SPECTROMETER FACILITY AT UCLA. Edward D. Young1, Issaku E. Kohl1, Kaitlyn McCain1, Junko Isa1, and Douglas Rumble III2, 1Department of Earth, Planetary, and Space Sciences, University of California Los Angeles, Los Angeles, CA, USA ([email protected]), 2Geophysical Laboratory, 5251 Broad Branch Rd. NW, Washington DC 20015-1305, USA. Introduction: Gas-source isotope ratio mass spec- Oxygen Isotopes: Analyses of extraterrestrial trometry is one of the primary methods for obtaining samples for precise and accurate 18O/16O and 17O/16O, the highest precision isotope ratio measurements of yielding diagnostic Δ′17O values, has been hampered geological and atmospheric samples. It is the standard historically by the presence of NF+ interfering with 33 + for triple oxygen isotope ratio analysis of meteorites, O2 at mass/charge 33 in the mass spectrum. The for example. However, until very recently, advances Panorama instrument can be used to eliminate this in- in this important technology have been limited. terference by virtue of its high mass resolution (Figure Here we describe a unique and novel isotope ratio 2). In a companion abstract, we demonstrate the ad- mass spectrometer (IRMS), the Nu Instruments Pano- vantages of ground-truthing extraterrestrial oxygen rama, developed explicitly for high-mass-resolution isotope ratio measurements of rocks with this method. analysis of isotopologue ratios of gas samples. We have shown recently that this instrument improves the reliability of oxygen isotope analyses at the highest precision and accuracy. In addition, it offers the pro- spects for developing the foundations for using multi- ply-substituted gas species (CH4, N2, O2) as tracers of atmospheric processes and geochemical cycles that should prove useful for extraterrestrial environments as flight instrumentation (e.g., TILDAS) improves. -
Clumped Isotope Thermometry of Carbonatites As an Indicator of Diagenetic Alteration
Available online at www.sciencedirect.com Geochimica et Cosmochimica Acta 74 (2010) 4110–4122 www.elsevier.com/locate/gca Clumped isotope thermometry of carbonatites as an indicator of diagenetic alteration Kate J. Dennis *, Daniel P. Schrag Department of Earth and Planetary Sciences, Harvard University, 20 Oxford Street, Cambridge, MA 02138, USA Received 16 September 2009; accepted in revised form 6 April 2010; available online 24 April 2010 Abstract We measure the clumped isotopic signature of carbonatites to assess the integrity of the clumped isotope paleothermometer over long timescales (107–109 years) and the susceptibility of the proxy to closed system re-equilibration of isotopes during burial diagenesis. We find pristine carbonatites that have primary oxygen isotope signatures, along with a Carrara marble standard, do not record clumped isotope signatures lighter than 0.31& suggesting atoms of carbon and oxygen freely exchange within the carbonate lattice at temperatures above 250–300 °C. There is no systematic trend in the clumped isotope signature of pristine carbonatites with age, although partial re-equilibration to lower temperatures can occur if a carbonatite has been exposed to burial temperatures for long periods of time. We conclude that the solid-state re-ordering of carbon and oxygen atoms is sufficiently slow to enable the use of clumped isotope paleothermometry on timescales of 108 years, but that diagenetic resetting can still occur, even without bulk recrystallization. In addition to the carbonatite data, an inorganic cal- ibration of the clumped isotope paleothermometer for low temperature carbonates (7.5–77 °C) is presented and highlights the need for further inter-lab standardization. -
Aptian-Albian Clumped Isotopes from Northwest China: Cool Temperatures, Variable Atmospheric Pco2 and Regional Shifts in Hydrologic Cycle Dustin T
https://doi.org/10.5194/cp-2020-152 Preprint. Discussion started: 21 December 2020 c Author(s) 2020. CC BY 4.0 License. Aptian-Albian clumped isotopes from northwest China: Cool temperatures, variable atmospheric pCO2 and regional shifts in hydrologic cycle Dustin T. Harper1, Marina B. Suarez1,2, Jessica Uglesich2, Hailu You3,4,5, Daqing Li6, Peter Dodson7 5 1 Department of Geology, The University of Kansas, Lawrence, KS, U.S.A. 2 Department of Geological Sciences, University of Texas, San Antonio, TX, U.S.A. 3 Key LaBoratory of VerteBrate Evolution and Human Origins, Institute of VerteBrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, P.R.C. 10 4 Chinese Academy of Science Center for Excellence in Life and Paleoenvironment, Beijing, P.R.C. 5 College of Earth and Planetary Sciences, University of Chinese Academy of Sciences, Beijing, P.R.C. 6 Institute of VerteBrate Paleontology and College of Life Science and Technology, Gansu Agricultural University, Lanzhou, P.R.C. 7 Department of Biomedical Sciences, The University of Pennsylvania, Philadelphia, U.S.A. 15 Correspondence to: Dustin T. Harper ([email protected]) Abstract. The Early Cretaceous is characterized by warm background temperatures (i.e., greenhouse climate) and carbon cycle perturbations that are often marked by Ocean Anoxic Events (OAEs) and associated shifts in the hydrologic cycle. Higher-resolution records of terrestrial and marine δ13C and δ18O (Both carBonates and organics) suggest climate shifts 20 during the Aptian-AlBian, including a warm period associated with OAE 1a in the early Aptian and subsequent “cold snap” near the Aptian-AlBian Boundary prior to the Kilian and OAE 1B. -
Automatic Isotopologue Normalization for Metabolic Tracer Analysis Sophie Trefely1,2* , Peter Ashwell1 and Nathaniel W
Trefely et al. BMC Bioinformatics (2016) 17:485 DOI 10.1186/s12859-016-1360-7 SOFTWARE Open Access FluxFix: automatic isotopologue normalization for metabolic tracer analysis Sophie Trefely1,2* , Peter Ashwell1 and Nathaniel W. Snyder1 Abstract Background: Isotopic tracer analysis by mass spectrometry is a core technique for the study of metabolism. Isotopically labeled atoms from substrates, such as [13C]-labeled glucose, can be traced by their incorporation over time into specific metabolic products. Mass spectrometry is often used for the detection and differentiation of the isotopologues of each metabolite of interest. For meaningful interpretation, mass spectrometry data from metabolic tracer experiments must be corrected to account for the naturally occurring isotopologue distribution. The calculations required for this correction are time consuming and error prone and existing programs are often platform specific, non-intuitive, commercially licensed and/or limited in accuracy by using theoretical isotopologue distributions, which are prone to artifacts from noise or unresolved interfering signals. Results: Here we present FluxFix (http://fluxfix.science), an application freely available on the internet that quickly and reliably transforms signal intensity values into percent mole enrichment for each isotopologue measured. ‘Unlabeled’ data, representing the measured natural isotopologue distribution for a chosen analyte, is entered by the user. This data is used to generate a correction matrix according to a well-established algorithm. The correction matrix is applied to labeled data, also entered by the user, thus generating the corrected output data. FluxFix is compatible with direct copy and paste from spreadsheet applications including Excel (Microsoft) and Google sheets and automatically adjusts to account for input data dimensions.