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Amino Acid Analysis in Biological Fluids by GC-MS
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by University of Regensburg Publication Server Amino acid analysis in biological fluids by GC-MS Dissertation zur Erlangung des Doktorgrades der Naturwissenschaften (Dr. rer. nat.) an der Fakultät für Chemie und Pharmazie der Universität Regensburg vorgelegt von Hannelore Kaspar aus Fürstenfeldbruck Juni 2009 Diese Doktorarbeit entstand in der Zeit von Oktober 2005 bis Juni 2009 am Institut für Funktionelle Genomik der Universität Regensburg. Die Arbeit wurde angeleitet von Prof. Dr. Peter J. Oefner. Promotionsgesuch eingereicht im Juni 2009 Kolloquiumstermin: 17.07.2009 Prüfungsausschuß: Vorsitzender: Prof. Dr. Manfred Scheer Erstgutachter: Prof. Dr. Frank-Michael Matysik Zweitgutachter: Prof. Dr. Peter J. Oefner Drittprüfer: Prof. Dr. Jörg Heilmann Für meine Eltern Danksagung Diese Doktorarbeit ist ein großer Meilensteil in meinem bisherigen Leben, den ich durch großartige Unterstützung von vielen lieben Leuten meistern konnte. Den allerwichtigsten Menschen möchte ich hier danken. Als erstes bedanke ich mich bei Prof. PJ. Oefner dafür in seinem Institut promovieren zu dürfen sowie für seinen unermüdlichen Einsatz seinen Mitarbeitern stets die besten Möglichkeiten in Sachen Forschung zu bieten und Kooperationen aufzubauen und zu fördern. Ein besonderes Dankeschön geht auch an Prof. Matysik für die freundliche Übernahme des Erstgutachtens. Bei Prof. Heilmann bedanke ich mich für die Bereitschaft an meiner Prüfung teilzunehmen sowie Prof. Scheer für die Übernahme des Prüfungsvorsitzes. Den allergrößten Dank möchte ich meiner Betreuerin und Mentorin Dr. Katja Dettmer aussprechen. Nicht nur für ihre hervorragende fachliche Betreuung währen meiner Doktorarbeit sondern auch für die vielen freundlichen und aufbauenden Worte, die Weitergabe ihres Wissens und vor allem dafür, dass Sie mir das Gefühl gab als Mensch und Wissenschaftler wichtig und wertvoll zu sein. -
NINDS Custom Collection II
ACACETIN ACEBUTOLOL HYDROCHLORIDE ACECLIDINE HYDROCHLORIDE ACEMETACIN ACETAMINOPHEN ACETAMINOSALOL ACETANILIDE ACETARSOL ACETAZOLAMIDE ACETOHYDROXAMIC ACID ACETRIAZOIC ACID ACETYL TYROSINE ETHYL ESTER ACETYLCARNITINE ACETYLCHOLINE ACETYLCYSTEINE ACETYLGLUCOSAMINE ACETYLGLUTAMIC ACID ACETYL-L-LEUCINE ACETYLPHENYLALANINE ACETYLSEROTONIN ACETYLTRYPTOPHAN ACEXAMIC ACID ACIVICIN ACLACINOMYCIN A1 ACONITINE ACRIFLAVINIUM HYDROCHLORIDE ACRISORCIN ACTINONIN ACYCLOVIR ADENOSINE PHOSPHATE ADENOSINE ADRENALINE BITARTRATE AESCULIN AJMALINE AKLAVINE HYDROCHLORIDE ALANYL-dl-LEUCINE ALANYL-dl-PHENYLALANINE ALAPROCLATE ALBENDAZOLE ALBUTEROL ALEXIDINE HYDROCHLORIDE ALLANTOIN ALLOPURINOL ALMOTRIPTAN ALOIN ALPRENOLOL ALTRETAMINE ALVERINE CITRATE AMANTADINE HYDROCHLORIDE AMBROXOL HYDROCHLORIDE AMCINONIDE AMIKACIN SULFATE AMILORIDE HYDROCHLORIDE 3-AMINOBENZAMIDE gamma-AMINOBUTYRIC ACID AMINOCAPROIC ACID N- (2-AMINOETHYL)-4-CHLOROBENZAMIDE (RO-16-6491) AMINOGLUTETHIMIDE AMINOHIPPURIC ACID AMINOHYDROXYBUTYRIC ACID AMINOLEVULINIC ACID HYDROCHLORIDE AMINOPHENAZONE 3-AMINOPROPANESULPHONIC ACID AMINOPYRIDINE 9-AMINO-1,2,3,4-TETRAHYDROACRIDINE HYDROCHLORIDE AMINOTHIAZOLE AMIODARONE HYDROCHLORIDE AMIPRILOSE AMITRIPTYLINE HYDROCHLORIDE AMLODIPINE BESYLATE AMODIAQUINE DIHYDROCHLORIDE AMOXEPINE AMOXICILLIN AMPICILLIN SODIUM AMPROLIUM AMRINONE AMYGDALIN ANABASAMINE HYDROCHLORIDE ANABASINE HYDROCHLORIDE ANCITABINE HYDROCHLORIDE ANDROSTERONE SODIUM SULFATE ANIRACETAM ANISINDIONE ANISODAMINE ANISOMYCIN ANTAZOLINE PHOSPHATE ANTHRALIN ANTIMYCIN A (A1 shown) ANTIPYRINE APHYLLIC -
Linking Phencyclidine Intoxication to the Tryptophan-Kynurenine Pathway Therapeutic Implications for Schizophrenia
Neurochemistry International 125 (2019) 1–6 Contents lists available at ScienceDirect Neurochemistry International journal homepage: www.elsevier.com/locate/neuint Linking phencyclidine intoxication to the tryptophan-kynurenine pathway: Therapeutic implications for schizophrenia T ∗ Hidetsugu Fujigakia, ,1, Akihiro Mourib,c,1, Yasuko Yamamotoa, Toshitaka Nabeshimac,d, Kuniaki Saitoa,c,d,e a Department of Disease Control and Prevention, Fujita Health University Graduate School of Health Sciences, 1-98 Dengakugakubo, Kutsukake-cho, Toyoake, Aichi 470- 1192, Japan b Department of Regulatory Science, Fujita Health University Graduate School of Health Sciences, 1-98 Dengakugakubo, Kutsukake-cho, Toyoake, Aichi 470-1192, Japan c Japanese Drug Organization of Appropriate Use and Research, 3-1509 Omoteyama, Tenpaku-ku, Nagoya, Aichi 468-0069, Japan d Advanced Diagnostic System Research Laboratory, Fujita Health University Graduate School of Health Sciences, 1-98 Dengakugakubo, Kutsukake-cho, Toyoake, Aichi 470-1192, Japan e Human Health Sciences, Graduate School of Medicine and Faculty of Medicine, Kyoto University, 54 Shogoinkawahara-cho, Sakyo-ku, Kyoto 606-8507, Japan ARTICLE INFO ABSTRACT Keywords: Phencyclidine (PCP) is a dissociative anesthetic that induces psychotic symptoms and neurocognitive deficits in Phencyclidine rodents similar to those observed in schizophrenia patients. PCP administration in healthy human subjects in- Kynurenic acid duces schizophrenia-like symptoms such as positive and negative symptoms, and a range of cognitive deficits. It Quinolinic acid has been reported that PCP, ketamine, and related drugs such as N-methyl-D-aspartate-type (NMDA) glutamate Kynurenine pathway receptor antagonists, induce behavioral effects by blocking neurotransmission at NMDA receptors. Further, Schizophrenia NMDA receptor antagonists reproduce specific aspects of the symptoms of schizophrenia. -
Molecule Based on Evans Blue Confers Superior Pharmacokinetics and Transforms Drugs to Theranostic Agents
Novel “Add-On” Molecule Based on Evans Blue Confers Superior Pharmacokinetics and Transforms Drugs to Theranostic Agents Haojun Chen*1,2, Orit Jacobson*2, Gang Niu2, Ido D. Weiss3, Dale O. Kiesewetter2, Yi Liu2, Ying Ma2, Hua Wu1, and Xiaoyuan Chen2 1Department of Nuclear Medicine, Xiamen Cancer Hospital of the First Affiliated Hospital of Xiamen University, Xiamen, China; 2Laboratory of Molecular Imaging and Nanomedicine, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, Maryland; and 3Laboratory of Molecular Immunology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland One of the major design considerations for a drug is its The goal of drug development is to achieve high activity and pharmacokinetics in the blood. A drug with a short half-life in specificity for a desired biologic target. However, many potential the blood is less available at a target organ. Such a limitation pharmaceuticals that meet these criteria fail as therapeutics because dictates treatment with either high doses or more frequent doses, of unfavorable pharmacokinetics, in particular, rapid blood clearance, both of which may increase the likelihood of undesirable side effects. To address the need for additional methods to improve which prevents the achievement of therapeutic concentrations. For the blood half-life of drugs and molecular imaging agents, we some drugs, the administration of large or frequently repeated doses developed an “add-on” molecule that contains 3 groups: a trun- is required to achieve and maintain therapeutic levels (1) but can, in cated Evans blue dye molecule that binds to albumin with a low turn, increase the probability of undesired side effects. -
Agmatine Modulates Spontaneous Activity in Neurons of the Rat Medial
Weiss et al. Translational Psychiatry (2018) 8:201 DOI 10.1038/s41398-018-0254-z Translational Psychiatry ARTICLE Open Access Agmatine modulates spontaneous activity in neurons of the rat medial habenular complex—a relevant mechanism in the pathophysiology and treatment of depression? Torsten Weiss1,RenéBernard2, Hans-Gert Bernstein3,RüdigerW.Veh1 and Gregor Laube1 Abstract The dorsal diencephalic conduction system connects limbic forebrain structures to monaminergic mesencephalic nuclei via a distinct relay station, the habenular complexes. Both habenular nuclei, the lateral as well as the medial nucleus, are considered to play a prominent role in mental disorders like major depression. Herein, we investigate the effect of the polyamine agmatine on the electrical activity of neurons within the medial habenula in rat. We present evidence that agmatine strongly decreases spontaneous action potential firing of medial habenular neurons by activating I1-type imidazoline receptors. Additionally, we compare the expression patterns of agmatinase, an enzyme capable of inactivating agmatine, in rat and human habenula. In the medial habenula of both species, agmatinase is similarly distributed and observed in neurons and, in particular, in distinct neuropil areas. The putative relevance of 1234567890():,; 1234567890():,; 1234567890():,; 1234567890():,; these findings in the context of depression is discussed. It is concluded that increased activity of the agmatinergic system in the medial habenula may strengthen midbrain dopaminergic activity. Consequently, -
Solutions to 7.012 Problem Set 1
MIT Biology Department 7.012: Introductory Biology - Fall 2004 Instructors: Professor Eric Lander, Professor Robert A. Weinberg, Dr. Claudette Gardel Solutions to 7.012 Problem Set 1 Question 1 Bob, a student taking 7.012, looks at a long-standing puddle outside his dorm window. Curious as to what was growing in the cloudy water, he takes a sample to his TA, Brad Student. He wanted to know whether the organisms in the sample were prokaryotic or eukaryotic. a) Give an example of a prokaryotic and a eukaryotic organism. Prokaryotic: Eukaryotic: All bacteria Yeast, fungi, any animial or plant b) Using a light microscope, how could he tell the difference between a prokaryotic organism and a eukaryotic one? The resolution of the light microscope would allow you to see if the cell had a true nucleus or organelles. A cell with a true nucleus and organelles would be eukaryotic. You could also determine size, but that may not be sufficient to establish whether a cell is prokaryotic or eukaryotic. c) What additional differences exist between prokaryotic and eukaryotic organisms? Any answer from above also fine here. In addition, prokaryotic and eukaryotic organisms differ at the DNA level. Eukaryotes have more complex genomes than prokaryotes do. Question 2 A new startup company hires you to help with their product development. Your task is to find a protein that interacts with a polysaccharide. a) You find a large protein that has a single binding site for the polysaccharide cellulose. Which amino acids might you expect to find in the binding pocket of the protein? What is the strongest type of interaction possible between these amino acids and the cellulose? Cellulose is a polymer of glucose and as such has many free hydroxyl groups. -
An Investigation of D-Cycloserine As a Memory Enhancer NCT00842309 Marchmay 23, 15, 2016 2019 Sabine Wilhelm, Ph.D
MayMarch 23, 2016 15, 2019 An investigation of D-cycloserine as a memory enhancer NCT00842309 MarchMay 23, 15, 2016 2019 Sabine Wilhelm, Ph.D. May 23, 2016 1. Background and Significance BDD is defined as a preoccupation with an imagined defect in appearance; if a slight physical anomaly is present, the concern is markedly excessive (American Psychiatric Association [APA], 1994). Preoccupations may focus on any body area but commonly involve the face or head, most often the skin, hair, or nose (Phillips et al., 1993). These preoccupations have an obsessional quality, in that they occur frequently and are usually difficult to resist or control (Phillips et al., 1998). Additionally, more than 90% of BDD patients perform repetitive, compulsive behaviors (Phillips et al., 1998), such as frequent mirror checking (Alliez & Robin, 1969), excessive grooming (Vallat et al., 1971), and skin picking (Phillips & Taub, 1995). Accordingly, a core component of Cognitive-Behavioral treatment for BDD is exposure and response prevention (ERP). Exposure and response prevention involves asking patients to gradually expose themselves to situations that make them anxious (e.g. talking to a stranger, going to a party) while refraining from engaging in any rituals (e.g. excessive grooming or camouflaging) or safety behaviors (e.g. avoiding eye contact). Rituals and safety behaviors are thought to maintain the fear response because they prevent the sufferer from staying in contact with the stimulus long enough for his or her anxiety to extinguish. By exposing the patient to the feared situation while preventing the rituals and safety behaviors, the patient’s anxiety is allowed to naturally extinguish and he is able to acquire a sense of safety in the presence of the feared stimulus. -
Resistant Depressed Patients
Electroconvulsive therapy suppresses the neurotoxic branch of the kynurenine pathway in treatment- resistant depressed patients The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Schwieler, Lilly, Martin Samuelsson, Mark A. Frye, Maria Bhat, Ina Schuppe-Koistinen, Oscar Jungholm, Anette G. Johansson, Mikael Landén, Carl M. Sellgren, and Sophie Erhardt. 2016. “Electroconvulsive therapy suppresses the neurotoxic branch of the kynurenine pathway in treatment-resistant depressed patients.” Journal of Neuroinflammation 13 (1): 51. doi:10.1186/ s12974-016-0517-7. http://dx.doi.org/10.1186/s12974-016-0517-7. Published Version doi:10.1186/s12974-016-0517-7 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:26318660 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Schwieler et al. Journal of Neuroinflammation (2016) 13:51 DOI 10.1186/s12974-016-0517-7 RESEARCH Open Access Electroconvulsive therapy suppresses the neurotoxic branch of the kynurenine pathway in treatment-resistant depressed patients Lilly Schwieler1*, Martin Samuelsson1,2, Mark A. Frye3, Maria Bhat4,5, Ina Schuppe-Koistinen1,6, Oscar Jungholm1, Anette G. Johansson5, Mikael Landén7,8, Carl M. Sellgren1,9,10 and Sophie Erhardt1 Abstract Background: Neuroinflammation is increasingly recognized as contributing to the pathogenesis of depression. Key inflammatory markers as well as kynurenic acid (KYNA) and quinolinic acid (QUIN), both tryptophan metabolites, have been associated with depressive symptoms and suicidality. -
Genefor the De Novo
Agric. Biol. Chem., 47 (10), 2405~2408, 1983 2405 Rapid Paper B; these two proteins are collectively termed quinolinate synthetase, (2) Protein B converts Synthesis of Quinolinic Acid by aspartic acid to an intermediate capable of the EnzymePreparation of undergoing condensation with DHAP cata- Escherichia coli Which Contains lyzed by Protein A, (3) Proteins A and B are coded by nadA and nadB, respectively, and (4) a Plasmid Carrying the nad the quinolinate synthetase system is subjected Gene for the de novo to feedback inhibition as well as end product Synthesis of NAD repression. An outline of quinolinic acid syn- thesis is shown in Fig. 1. Intermediates of Masaaki Kuwahara, Mizuyo Yonehana, quinolinic acid synthesis, however, have not Tetsuhiro Kimura and Yutaka Ishida yet been isolated in pure forms except for butynedioic acid and its amination product2) Department of Food Science, KagawaUniversity, which are proposed to be intermediates. Our Miki-cho, Kagawa 761-07, Japan experiment aimed to elucidate the inter- Received March 17, 1983 mediary metabolism of the de novo pathway for NADsynthesis using recombinant DNA A plasmid, pNADHl, carrying the nad gene for the de techniques with an E. coli host-vector system. novo synthesis of NADwas constructed with pBR322 and chromosomal DNAof Escherichia coli. Cleavage by re- MATERIALS AND METHODS striction endonucleases showed that the plasmid contained a DNAinsert of 8.9 Kbp at the Hin&lll site ofpBR322. Strains. Escherichia coli C600 (F~, thr~, leu", thi ~, m~, The cell-free extract of a transformant of E. coli C600 r~, LacY) and HB101 carrying plasmid pBR322 were which contained the plasmid formed 5 times more quinol- provided by Prof. -
Differential Control of Steroidogenesis by Nitric Oxide and Its Adaptation with Hypoxia
259 THEMATIC REVIEW eNOS activation and NO function: Differential control of steroidogenesis by nitric oxide and its adaptation with hypoxia Charles A Ducsay and Dean A Myers1 Center for Perinatal Biology, Loma Linda University School of Medicine, Loma Linda, California 92350, USA 1Department of Obstetrics and Gynecology, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma 73190, USA (Correspondence should be addressed to C A Ducsay; Email: [email protected]) Abstract Nitric oxide (NO) plays a role in a wide range of physiological regulation of NO synthases in specific endocrine tissues processes. Aside from its widely studied function in the including ovaries, testes, and adrenal glands. The effects of regulation of vascular function, NO has been shown to hypoxia on generation of NO and subsequent effects on impact steroidogenesis in a number of different tissues. The steroid biosynthesis will also be examined. Finally, a potential goal of this review is to explore the effects of NO on steroid model for the interaction of hypoxia on NO synthesis and production and further, to discern its source(s) and steroid production is proposed. mechanism of action. Attention will be given to the Journal of Endocrinology (2011) 210, 259–269 Introduction NO and steroidogenesis The initial rate-limiting step in steroidogenesis involves Nitric oxide (NO) is a diatomic free-radical gas involved in a cholesterol transport to the inner mitochondrial membrane number of physiologic processes (Moncada & Palmer 1991, by steroidogenic acute regulatory protein (StAR) and its Moncada et al.1991) and is synthesized from L-arginine by a binding partner, peripheral benzodiazepine receptor. -
NMDA Agonists Using ALZET Osmotic Pumps
ALZET® Bibliography References on the Administration of NMDA Agonists Using ALZET Osmotic Pumps Aspartic Acid P7453: M. Domercq, et al. Excitotoxic oligodendrocyte death and axonal damage induced by glutamate transporter inhibition. Glia 2005;52(1):36-46 ALZET Comments: Oligonucleotide, antisense; oligonucleotide sense; kainate, dihydro-; aspartic acid, DL-threo-B-benzyloxy-; Saline, sterile; CSF/CNS (optic nerve); Rabbit; 1003D; 3 days; Controls received mp w/ vehicle, or contralateral nerves; antisense (glutamate transporters GLAST + GLT-1); animal info (adult, male, white New Zealand). P6888: J. Darman, et al. Viral-induced spinal motor neuron death is non-cell-autonomous and involves glutamate excitotoxicity. Journal of Neuroscience 2004;24(34):7566-7575 ALZET Comments: Aspartic acid, dl-threo-B-hydroxy; spermine, 1-naphthyl acetyl; CSF/CNS (intrathecal, subarachnoid space); Rat; 1007D; 7 days; Controls received mp w/ saline; enzyme inhibitors (GLT-1, GluR2). P3908: A. Hirata, et al. AMPA receptor-mediated slow neuronal death in the rat spinal cord induced by long-term blockade of glutamate transporters with THA. Brain Research 1997;771(37-44 ALZET Comments: Aspartic acid, dl-threo-B-hydroxy; Glutamate, l-; CSF, artificial;; CSF/CNS (subarachnoid space, intrathecal); Rat; 2ML1; no duration posted; dose-response; cannula position verified. P0289: R. M. Mangano, et al. Chronic infusion of endogenous excitatory amino acids into rat striatum and hippocampus. Brain Res. Bull 1983;10(47-51 ALZET Comments: Aminobutyric acid, Y-; Aspartic acid, dl-threo-B-hydroxy; Aspartic acid, l-; Cysteine sulfinic acid; Glutamic acid, l-; Radio-isotopes; 3H tracer; Acetate; Saline; CSF/CNS (corpus striatum); CSF/CNS (hippocampus); Rat; 2002; 2 weeks; comparison of injec. -
Amino Acid Transport Pathways in the Small Intestine of the Neonatal Rat
Pediat. Res. 6: 713-719 (1972) Amino acid neonate intestine transport, amino acid Amino Acid Transport Pathways in the Small Intestine of the Neonatal Rat J. F. FITZGERALD1431, S. REISER, AND P. A. CHRISTIANSEN Departments of Pediatrics, Medicine, and Biochemistry, and Gastrointestinal Research Laboratory, Indiana University School of Medicine and Veterans Administration Hospital, Indianapolis, Indiana, USA Extract The activity of amino acid transport pathways in the small intestine of the 2-day-old rat was investigated. Transport was determined by measuring the uptake of 1 mM con- centrations of various amino acids by intestinal segments after a 5- or 10-min incuba- tion and it was expressed as intracellular accumulation. The neutral amino acid transport pathway was well developed with intracellular accumulation values for leucine, isoleucine, valine, methionine, tryptophan, phenyl- alanine, tyrosine, and alanine ranging from 3.9-5.6 mM/5 min. The intracellular accumulation of the hydroxy-containing neutral amino acids threonine (essential) and serine (nonessential) were 2.7 mM/5 min, a value significantly lower than those of the other neutral amino acids. The accumulation of histidine was also well below the level for the other neutral amino acids (1.9 mM/5 min). The basic amino acid transport pathway was also operational with accumulation values for lysine, arginine and ornithine ranging from 1.7-2.0 mM/5 min. Accumulation of the essential amino acid lysine was not statistically different from that of nonessential ornithine. Ac- cumulation of aspartic and glutamic acid was only 0.24-0.28 mM/5 min indicating a very low activity of the acidic amino acid transport pathway.