Did Physics Matter to the Pioneers of Microscopy?
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Volvox Barberi Flocks, Forming Near-Optimal, Two
bioRxiv preprint doi: https://doi.org/10.1101/279059; this version posted March 8, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Volvox barberi flocks, forming near-optimal, two-dimensional, polydisperse lattice packings Ravi Nicholas Balasubramanian1 1Harriton High School, 600 North Ithan Avenue, Bryn Mawr, PA 19010, USA Volvox barberi is a multicellular green alga forming spherical colonies of 10000-50000 differentiated somatic and germ cells. Here, I show that these colonies actively self-organize over minutes into “flocks" that can contain more than 100 colonies moving and rotating collectively for hours. The colonies in flocks form two-dimensional, irregular, \active crystals", with lattice angles and colony diameters both following log-normal distributions. Comparison with a dynamical simulation of soft spheres with diameters matched to the Volvox samples, and a weak long-range attractive force, show that the Volvox flocks achieve optimal random close-packing. A dye tracer in the Volvox medium revealed large hydrodynamic vortices generated by colony and flock rotations, providing a likely source of the forces leading to flocking and optimal packing. INTRODUCTION behavior (see, e.g., [8, 9] and references therein) but their interactions are often dominated by viscous forces (e.g. fluid drag) unlike larger organisms which are The remarkable multicellular green alga Volvox barberi dominated by inertial forces. Here, I show that V. [1] forms spherical colonies of 10,000 to 50,000 cells barberi colonies, which are themselves composed of many embedded in a glycol-protein based extra cellular matrix individual cells acting together, show collective behavior (ECM) and connected by cytoplasmic bridges that may at a higher level of organization. -
Introduction to the Cell Cell History Cell Structures and Functions
Introduction to the cell cell history cell structures and functions CK-12 Foundation December 16, 2009 CK-12 Foundation is a non-profit organization with a mission to reduce the cost of textbook materials for the K-12 market both in the U.S. and worldwide. Using an open-content, web-based collaborative model termed the “FlexBook,” CK-12 intends to pioneer the generation and distribution of high quality educational content that will serve both as core text as well as provide an adaptive environment for learning. Copyright ©2009 CK-12 Foundation This work is licensed under the Creative Commons Attribution-Share Alike 3.0 United States License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/3.0/us/ or send a letter to Creative Commons, 171 Second Street, Suite 300, San Francisco, California, 94105, USA. Contents 1 Cell structure and function dec 16 5 1.1 Lesson 3.1: Introduction to Cells .................................. 5 3 www.ck12.org www.ck12.org 4 Chapter 1 Cell structure and function dec 16 1.1 Lesson 3.1: Introduction to Cells Lesson Objectives • Identify the scientists that first observed cells. • Outline the importance of microscopes in the discovery of cells. • Summarize what the cell theory proposes. • Identify the limitations on cell size. • Identify the four parts common to all cells. • Compare prokaryotic and eukaryotic cells. Introduction Knowing the make up of cells and how cells work is necessary to all of the biological sciences. Learning about the similarities and differences between cell types is particularly important to the fields of cell biology and molecular biology. -
Algae of the Genus Volvox (Chlorophyta) in Sub-Extreme Habitats T A.G
Short Communication T REPRO N DU The International Journal of Plant Reproductive Biology 12(2) July, 2020, pp.156-158 LA C P T I F V O E B Y T I DOI 10.14787/ijprb.2020 12.2. O E I L O C G O S I S T E S H Algae of the genus Volvox (Chlorophyta) in sub-extreme habitats T A.G. Desnitskiy Department of Embryology, Saint-Petersburg State University, Saint-Petersburg, 199034, Universitetskaya nab. 7/9, Russia e-mail: [email protected]; [email protected] Received: 18. 05. 2020; Revised: 08. 06. 2020; Accepted and Published online: 15. 06. 2020 ABSTRACT Literature data on the life of green colonial algae of the genus Volvox (Chlorophyta) in sub-extreme habitats (polar, sub-polar and mountain regions) are critically considered. Very few species (primarily homothallic Volvox aureus) are able to thrive in such conditions. Keywords : Geographical distribution, reproduction, sub-extreme habitats, Volvox. The genus Volvox Linnaeus (Volvocaceae, Chlorophyta) Peru (South America) at the elevation of more than five includes more than 20 species of freshwater flagellate algae thousand meters above sea level seems to be doubtful. The (Nozaki et al. 2015), providing an opportunity to study the illustration from this article (which focuses mainly on developmental mechanisms in a relatively simple system diatoms) shows a spherical colony with a diameter of about 14 consisting of two cellular types (somatic and reproductive). μm, consisting of several hundred very small cells (Fritz et al. Volvox carteri f. nagariensis Iyengar is a valuable model of 2015, p. -
Laboratory Exercises in Microbiology: Discovering the Unseen World Through Hands-On Investigation
City University of New York (CUNY) CUNY Academic Works Open Educational Resources Queensborough Community College 2016 Laboratory Exercises in Microbiology: Discovering the Unseen World Through Hands-On Investigation Joan Petersen CUNY Queensborough Community College Susan McLaughlin CUNY Queensborough Community College How does access to this work benefit ou?y Let us know! More information about this work at: https://academicworks.cuny.edu/qb_oers/16 Discover additional works at: https://academicworks.cuny.edu This work is made publicly available by the City University of New York (CUNY). Contact: [email protected] Laboratory Exercises in Microbiology: Discovering the Unseen World through Hands-On Investigation By Dr. Susan McLaughlin & Dr. Joan Petersen Queensborough Community College Laboratory Exercises in Microbiology: Discovering the Unseen World through Hands-On Investigation Table of Contents Preface………………………………………………………………………………………i Acknowledgments…………………………………………………………………………..ii Microbiology Lab Safety Instructions…………………………………………………...... iii Lab 1. Introduction to Microscopy and Diversity of Cell Types……………………......... 1 Lab 2. Introduction to Aseptic Techniques and Growth Media………………………...... 19 Lab 3. Preparation of Bacterial Smears and Introduction to Staining…………………...... 37 Lab 4. Acid fast and Endospore Staining……………………………………………......... 49 Lab 5. Metabolic Activities of Bacteria…………………………………………….…....... 59 Lab 6. Dichotomous Keys……………………………………………………………......... 77 Lab 7. The Effect of Physical Factors on Microbial Growth……………………………... 85 Lab 8. Chemical Control of Microbial Growth—Disinfectants and Antibiotics…………. 99 Lab 9. The Microbiology of Milk and Food………………………………………………. 111 Lab 10. The Eukaryotes………………………………………………………………........ 123 Lab 11. Clinical Microbiology I; Anaerobic pathogens; Vectors of Infectious Disease….. 141 Lab 12. Clinical Microbiology II—Immunology and the Biolog System………………… 153 Lab 13. Putting it all Together: Case Studies in Microbiology…………………………… 163 Appendix I. -
And Development Could Be Examined in Detail. Prior to Darden's Work
CELLULAR DiFPERLENTIA TION IN VOLVOX* BY RICHARD C. STARR DEPARTMENT OF BOTANY, INDIANA UNIVERSITY, BLOOMINGTON Communicated by R. E. Cleland, January 29, 1968 MIicroorganiisms have become important research materials in the study of differentiation at all levels of organization from the molecular to the cellular, but there remains a wealth of species whose potential has not as yet been realized due to problems of isolation, cultivation, or manipulation of the various phases of the life cycle. In this latter group the green alga Volvox has for many years been recognized as having aspects of organization and development that would make it a prime species for investigation of differentiation at the cellular level. The Volvox individual is a spheroid in which the biflagellate cells are arranged in a single peripheral layer. Two types of cells are always present: somatic cells which characteristically make up the bulk of the organism; and reproductive cells which occur in small numbers and which may be differentiated as gonidia, i.e., asexual cells capable of reproducing new individuals without fertilization, or sexual cells capable of becoming eggs, or of forming packets of sperm cells. It is of special interest that many of the species of Volvox were delimited by such early workers as Powers' and Shaw2 using as taxonomic criteria the type and degree of differentiation, and the time at which such differentiation occurred during the development of the young individuals. The pioneering work by Darden3 on Volvox aureus showed the possibility of studying the control of the reproductive cells in cultured material where growth and development could be examined in detail. -
Miranda, 5 | 2011 Jim Endersby, Imperial Nature: Joseph Hooker and the Practices of Victorian S
Miranda Revue pluridisciplinaire du monde anglophone / Multidisciplinary peer-reviewed journal on the English- speaking world 5 | 2011 South and Race / Staging Mobility in the United States Jim Endersby, Imperial Nature: Joseph Hooker and the Practices of Victorian Science Laurence Talairach-Vielmas Édition électronique URL : http://journals.openedition.org/miranda/2550 ISSN : 2108-6559 Éditeur Université Toulouse - Jean Jaurès Référence électronique Laurence Talairach-Vielmas, « Jim Endersby, Imperial Nature: Joseph Hooker and the Practices of Victorian Science », Miranda [En ligne], 5 | 2011, mis en ligne le 29 novembre 2011, consulté le 25 octobre 2018. URL : http://journals.openedition.org/miranda/2550 Ce document a été généré automatiquement le 25 octobre 2018. Miranda is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. Jim Endersby, Imperial Nature: Joseph Hooker and the Practices of Victorian S... 1 Jim Endersby, Imperial Nature: Joseph Hooker and the Practices of Victorian Science Laurence Talairach-Vielmas RÉFÉRENCE Jim Endersby, Imperial Nature : Joseph Hooker and the Practices of Victorian Science (Chicago and London : The University of Chicago Press, [2008] 2010), 429 p, ISBN 978–0–226–20791– 9 1 L’ouvrage de Jim Endersby, Imperial Nature : Joseph Hooker and the Practices of Victorian Science, ne se veut pas une biographie du naturaliste Joseph Dalton Hooker (1817–1911). Bien au contraire. Hooker fut un scientifique véritablement victorien, dont la carrière retrace l’évolution du statut de scientifique, les enjeux et tensions au cœur de la profession et les liens entre scientifiques et naturalistes amateurs. L’étude de Endersby se concentre sur les années charnières de la carrière de Hooker, avant son accession à la tête de Kew Gardens, à un moment où le statut du scientifique est en pleine évolution. -
ACTA PROTOZOOLOGICA Redaktor Naczelny: Zastępca Redaktora Naczelnego: Sekretarz Redakcji ZDZISŁAW RAABE STANISŁAW DRYL STANISŁAW L
PROTOZOOLOGICAACTA ''V.' i -XhM'i- i i ' ; m % & . / M ' J.JsSw. v.. w...... A .. ..sSSL. ..3 . - ,«.. REDACTORU M CONSILIUM S. DRYL (WARSZAWA), A. GRĘBECKI (WARSZAWA), O. JlROVEC (PRAHA), G. I. POLJANSKY (LENINGRAD), Z. RAABE (WARSZAWA), K. M. SUKHANOVA (LENINGRAD) VOLUMEN Vir Fasciculi: 1 — 10 WARSZAWA 19 6 9 http://rcin.org.pl INSTYTUT BIOLOGII DOŚWIADCZALNEJ IM. M. NENCKIEGO POLSKIEJ AKADEMII NAUK ACTA PROTOZOOLOGICA Redaktor Naczelny: Zastępca Redaktora Naczelnego: Sekretarz Redakcji ZDZISŁAW RAABE STANISŁAW DRYL STANISŁAW L. KAZUBSKI NOTICE TO AUTHORS Acta Protozoologica is intended as a journal serving for the publication of original papers embodying the results of experimental or theoretical research in ail fields of protozoology with the exception of purely clinical reports. The papers must be concise and will not be accepted if they have been previously published elswhere. After acceptance by the Editors papers will be printed in the order as they have been received, in the possibly shortest time. Papers are accepted in English, French, German and Russian. Every paper should begin with the name and postal address of the laboratory, name and the surname of the author, title in the language of the text, and translation of the title into the author's own language. The paper should be accompanied by a sum- mary in the language of the text, not exceeding 100 words, also the translation into the author's own language. The authors speaking English, French, German, or Russian should translate the title and the summary into another one of the 4 lan- guages accepted in the Journal. In the Russian texts also the name and the postal address of the laboratory, legends of tables, plates and text-illustrations must be translated, the translation of the summary may be somewhat more extensive, and the name of the author should be given additionally also in the Latin characters. -
Volvox Barberi Flocks, Forming Near-Optimal, Two-Dimensional
bioRxiv preprint doi: https://doi.org/10.1101/279059; this version posted April 1, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Volvox barberi flocks, forming near-optimal, two-dimensional, polydisperse lattice packings Ravi Nicholas Balasubramanian1 1Harriton High School, 600 North Ithan Avenue, Bryn Mawr, PA 19010, USA Volvox barberi is a multicellular green alga forming spherical colonies of 10000-50000 differentiated somatic and germ cells. Here, I show that these colonies actively self-organize over minutes into “flocks" that can contain more than 100 colonies moving and rotating collectively for hours. The colonies in flocks form two-dimensional, irregular, \active crystals", with lattice angles and colony diameters both following log-normal distributions. Comparison with a dynamical simulation of soft spheres with diameters matched to the Volvox samples, and a weak long-range attractive force, show that the Volvox flocks achieve optimal random close-packing. A dye tracer in the Volvox medium revealed large hydrodynamic vortices generated by colony and flock rotations, providing a likely source of the forces leading to flocking and optimal packing. INTRODUCTION of many individual cells acting together, show collective behavior at a higher level of organization. Entire colonies can dynamically gather into large populations that move The remarkable multicellular green alga Volvox barberi together, even while individual colonies can continue to [1] forms spherical colonies of 10,000 to 50,000 cells rotate separately. -
Biology • Environment • Chemistry MEMORABLE TEACHING MADE EASY!
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Dancing Volvox: Hydrodynamic Bound States of Swimming Algae
week ending PRL 102, 168101 (2009) PHYSICAL REVIEW LETTERS 24 APRIL 2009 Dancing Volvox: Hydrodynamic Bound States of Swimming Algae Knut Drescher,1 Kyriacos C. Leptos,1 Idan Tuval,1 Takuji Ishikawa,2 Timothy J. Pedley,1 and Raymond E. Goldstein1 1Department of Applied Mathematics and Theoretical Physics, University of Cambridge, Cambridge CB3 0WA, United Kingdom 2Department of Bioengineering and Robotics, Tohoku University, Sendai 980-8579, Japan (Received 14 January 2009; published 20 April 2009) The spherical alga Volvox swims by means of flagella on thousands of surface somatic cells. This geometry and its large size make it a model organism for studying the fluid dynamics of multicellularity. Remarkably, when two nearby Volvox colonies swim close to a solid surface, they attract one another and can form stable bound states in which they ‘‘waltz’’ or ‘‘minuet’’ around each other. A surface-mediated hydrodynamic attraction combined with lubrication forces between spinning, bottom-heavy Volvox explains the formation, stability, and dynamics of the bound states. These phenomena are suggested to underlie observed clustering of Volvox at surfaces. DOI: 10.1103/PhysRevLett.102.168101 PACS numbers: 47.63.Gd, 87.17.Jj, 87.18.Ed Long after he made his great contributions to micros- dance. Both dances can last many tens of minutes or even copy and started a revolution in biology, Antony several hours. Although the orbiting component of the van Leeuwenhoek peered into a drop of pond water and waltzing is reminiscent of vortex pairs in inviscid fluids, discovered one of nature’s geometrical marvels [1]. This the attraction and the minuet are not, and as the Reynolds was the freshwater alga which, years later, in the very last number is 0:03, inertia is negligible. -
Prepared Microscope Slides in Sets
Prepared Microscope Slides Sets and Series 15 PREPARED MICROSCOPE SLIDES The microscope is an essential in- strument for modern biological stud- ies in schools, colleges and universi- ties. The well prepared microscope slide is a most important means of Nr. 519c Mais . Zea mays demonstration which can be exam- Nr. 610d Stengel, quer onokotyledonen- Honigbiene M m ellifica ined at different magnifications so stam Apis m kend-saugende, lec erkzeuge that increasing amount of detail can Mundw at be resolved. In this sense it is inex- Totalpräpar haustible. LIEDER PREMIUM PREPARED Nr. 626c Dünndarm MICROSCOPE SLIDES are made der Katze Felis domestica in our laboratories in Ludwigsburg/ Querschnitt Germany under rigourous scientific control. They are the product of long experience combined with the most up to date techniques. The prerequisite for excellent preparations is good material, well preserved and fixed so that the finer structures are retained in as life-like a way as possible. Microtome sections are cut from this material by our highly skilled and experienced staff. They are of a thickness which will finally result in slides from which the maximum reso- lution of the structural components can be obtained. Particular attention is paid to the staining technique and in each case the selected method for a particular specimen will ensure the best possible differentiation com- bined with clear definition and permanency of staining. LIEDER prepared microscope slides are delivered on best glasses with fine ground edges of the size 26 x 76 mm (1'’ x 3'’) and are mailed in solid boxes of different sizes and prices. -
Scientific Papers of Asa Gray, Vol II, 1841-1886
This is a reproduction of a library book that was digitized by Google as part of an ongoing effort to preserve the information in books and make it universally accessible. https://books.google.com I ■ *- I University of Virginia Library QK3 G77 1889 V.2 SEL Scientific papers of Asa Gray, NX DD1 7DD 2CH LIBRARY OF THE UNIVERSITY OF VIRGINIA FROM THE BOOKS OF REV. HASLETT McKIM i : i M SCIENTIFIC PAPERS OF ASA GRAY SELECTED BY CHARLES SPRAGUE SARGENT VOL. II. ESSAYS; BIOGRAPHICAL SKETCHES 1841-1886 T O ■TT'H rp "» T BOSTON AND NEW YORK HOUGHTON, MIFFLIN AND COMPANY ffibe iiiiuTsiDc Pre?!*, £ambrit>or 18S9 3 .GJ 7 1883 1 560^ y, , . Copyright, 1889, Bt CHARLES S PRAGUE SARGENT. All rights reserved. ' The Riverside Frets, Cambridge, Mass , V. S. A. Electrotyped and Printed by II. 0. lloughtou & Company. CONTENTS. ESSAYS. PAGJ European Herbaria 1 Notes of a Botanical Excursion to the Mountains op North Carolina 22 The Longevity of Trees 71 The Flora of Japan 125 Sequoia and its History 142 Do Varieties Wear Out or tend to Wear Out .... 174 ^Estivation and its Terminology 181 A Pilgrimage to Torreya 189 Notes on the History of Helianthus Tubehosus .... 197 Forest Geography and Archeology 204 The Pertinacity and Predominance of Weeds .... 234 The Flora of North America 243 Gender of Names of Varieties 257 Characteristics of the North American Flora .... 260 BIOGRAPHICAL SKETCHES. Brown and Humboldt 283 Augustin-Pyramus De Candolle 289 Benjamin D. Greene 310 Charles Wilkes Short 312 Francis Boott 315 William Jackson Hooker 321 John Lindley 333 William Henry Harvey 337 Henry P.