How Bacterial Cell Division Might Cheat Turgor Pressure – a Unified Mechanism of Septal Division in Gram-Positive and Gram-Negative Bacteria
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Progression of the Late-Stage Divisome Is Unaffected by the Depletion of the Cytoplasmic Ftsz Pool ✉ Nadine Silber 1,2,3, Christian Mayer1,2,3, Cruz L
ARTICLE https://doi.org/10.1038/s42003-021-01789-9 OPEN Progression of the late-stage divisome is unaffected by the depletion of the cytoplasmic FtsZ pool ✉ Nadine Silber 1,2,3, Christian Mayer1,2,3, Cruz L. Matos de Opitz 1,2 & Peter Sass 1,2 Cell division is a central and essential process in most bacteria, and also due to its complexity and highly coordinated nature, it has emerged as a promising new antibiotic target pathway in recent years. We have previously shown that ADEP antibiotics preferably induce the degradation of the major cell division protein FtsZ, thereby primarily leading to a depletion of the cytoplasmic FtsZ pool that is needed for treadmilling FtsZ rings. To further investigate the 1234567890():,; physiological consequences of ADEP treatment, we here studied the effect of ADEP on the different stages of the FtsZ ring in rod-shaped bacteria. Our data reveal the disintegration of early FtsZ rings during ADEP treatment in Bacillus subtilis, indicating an essential role of the cytoplasmic FtsZ pool and thus FtsZ ring dynamics during initiation and maturation of the divisome. However, progressed FtsZ rings finalized cytokinesis once the septal peptidoglycan synthase PBP2b, a late-stage cell division protein, colocalized at the division site, thus implying that the concentration of the cytoplasmic FtsZ pool and FtsZ ring dynamics are less critical during the late stages of divisome assembly and progression. 1 Department of Microbial Bioactive Compounds, Interfaculty Institute of Microbiology and Infection Medicine, University of Tübingen, Auf der Morgenstelle, Tübingen, Germany. 2 Cluster of Excellence - Controlling Microbes to Fight Infections, University of Tübingen, Tübingen, Germany. -
Cell Division in Corynebacterineae
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Frontiers - Publisher Connector REVIEW ARTICLE published: 10 April 2014 doi: 10.3389/fmicb.2014.00132 Cell division in Corynebacterineae Catriona Donovan* and Marc Bramkamp* Department of Biology I, Ludwig-Maximilians-University, Munich, Planegg-Martinsried, Germany Edited by: Bacterial cells must coordinate a number of events during the cell cycle. Spatio-temporal Wendy Schluchter, University of regulation of bacterial cytokinesis is indispensable for the production of viable, genetically New Orleans, USA identical offspring. In many rod-shaped bacteria, precise midcell assembly of the division Reviewed by: machinery relies on inhibitory systems such as Min and Noc. In rod-shaped Actinobacteria, Julia Frunzke, Jülich Research Centre, Germany for example Corynebacterium glutamicum and Mycobacterium tuberculosis, the divisome Andreas Burkovski, Friedric assembles in the proximity of the midcell region, however more spatial flexibility is University of Erlangen-Nuremberg observed compared to Escherichia coli and Bacillus subtilis. Actinobacteria represent a (FAU), Germany group of bacteria that spatially regulate cytokinesis in the absence of recognizable Min and *Correspondence: Noc homologs. The key cell division steps in E. coli and B. subtilis have been subject to Catriona Donovan and Marc Bramkamp, Department of Biology I, intensive study and are well-understood. In comparison, only a minimal set of positive and Ludwig-Maximilians-University, negative regulators of cytokinesis are known in Actinobacteria. Nonetheless, the timing Munich, Großhaderner Str. 2-4, of cytokinesis and the placement of the division septum is coordinated with growth as 82152 Planegg-Martinsried, well as initiation of chromosome replication and segregation. -
Some English Terms Used in Microbiology 1
Some English terms used in Microbiology 1 Shapes & Structures General terms Antibiotics and related Bacillus (pl. bacilli) Acid fast (acid fastness) ácido-alcohol resistente Acetylases Capsule Bacterial (adj.) Ampicillin Cell wall pared celular Bacterium (pl., bacteria): Beta-lactamase Coccus (cocci; and hence Staphylococcus, Bench: poyata Beta-lactamic Staphylococci) Biofilm Cephalosporin Core oligosaccharide núcleo oligosacarídico Burner (Bunsen Burner): mechero (Bunsen) Chloramphenicol Cortex Colony: colonia Colistin Fimbria (pl. fimbriae) Coverslip: (vidrio) cubreobjetos D-Cycloserine Flagellum (pl. flagella) Dye colorante DNA-gyrase Glycocalix Eukaryote or eucaryote Erythromycin Lipid A Incubator: estufa de incubación Ethambuthol Lipopolysaccharide Inoculating loop asa de siembra Fluoroquinolone Murein mureína Inoculum (inocula): Gentamicin (formerly gentamycin) Omp: outer membrane major protein proteína To flame: flamear Isoniazide de membrane externa Flask (Erlenmeyer flask): matraz Methicillin Outer membrane membrana externa Volumetric flask: matraz aforado Methylases PAMP (pathogen associated molecular pattern): Microorganism Nalidixic acid patrón molecular asociado a patógeno Motility movilidad Penicillin Peptidoglycan peptidoglucano Mycoplasm Penicillin binding protein (PBP) Periplasm periplasma Negative staining tinción negativa Phosphonomycin Periplasmic space espacio periplásmico Petri dish: placa de Petri Phosphorylases Permeability barrier barrera de permeabilidad Prokaryote or procaryote Polymyxin Pilus (pl. pili) Rack: -
Crystal Structure of Ftsa from Staphylococcus Aureus
FEBS Letters 588 (2014) 1879–1885 journal homepage: www.FEBSLetters.org Crystal structure of FtsA from Staphylococcus aureus Junso Fujita a, Yoko Maeda a, Chioko Nagao c, Yuko Tsuchiya c, Yuma Miyazaki a, Mika Hirose b, ⇑ Eiichi Mizohata a, Yoshimi Matsumoto d, Tsuyoshi Inoue a, Kenji Mizuguchi c, Hiroyoshi Matsumura a, a Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan b Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan c National Institute of Biomedical Innovation, 7-6-8, Saito-Asagi, Ibaraki, Osaka 567-0085, Japan d Laboratory of Microbiology and Infectious Diseases, Institute of Scientific and Industrial Research, Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka 567-0047, Japan article info abstract Article history: The bacterial cell-division protein FtsA anchors FtsZ to the cytoplasmic membrane. But how FtsA Received 5 February 2014 and FtsZ interact during membrane division remains obscure. We have solved 2.2 Å resolution crys- Revised 2 April 2014 tal structure for FtsA from Staphylococcus aureus. In the crystals, SaFtsA molecules within the dimer Accepted 2 April 2014 units are twisted, in contrast to the straight filament of FtsA from Thermotoga maritima, and the Available online 18 April 2014 half of S12–S13 hairpin regions are disordered. We confirmed that SaFtsZ and SaFtsA associate Edited by Kaspar Locher in vitro, and found that SaFtsZ GTPase activity is enhanced by interaction with SaFtsA. Structured summary of protein interactions: Keywords: Bacterial divisome SaFtsA and SaFtsZ bind by comigration in non denaturing gel electrophoresis (View interaction) Staphylococcus aureus SaFtsZ and SaFtsA bind by molecular sieving (View interaction) FtsA SaFtsA and SaFtsA bind by x-ray crystallography (View interaction) FtsZ Ó 2014 Federation of European Biochemical Societies. -
The Regulation of Arsenic Metabolism in Rhizobium Sp. NT-26
The regulation of arsenic metabolism in Rhizobium sp. NT-26 Paula Corsini Madeira University College London Thesis submitted for the degree of Doctor of Philosophy 2016 I, Paula Corsini Madeira, confirm that the work presented in this thesis is my own. Where information has been derived from other sources, I confirm that this has been indicated in the thesis. Date: Signed: II Abstract Arsenic (As) is a toxic metalloid and a major contaminant in terrestrial and aquatic environments. The two soluble forms, arsenite (AsIII) and arsenate (AsV) are toxic to most organisms. A range of phylogenetically distant bacteria are able to oxidize AsIII to the less toxic form, arsenate AsV using the periplasmic arsenite oxidase (AioBA). The two-component signal transduction system AioS/AioR and the AsIII-binding periplasmic protein AioX are required for AsIII oxidation and are involved in the transcriptional regulation of the aioBA operon. Most AsIII oxidisers can also reduce AsV to AsIII via the As (Ars) resistance system. The focus of this work was to understand the regulation of genes involved in AsIII oxidation and As resistance together with those involved in phosphate metabolism in the facultative chemolithoautotrophic AsIII oxidiser NT-26 grown under different conditions. Gene expression was studied by quantitative PCR in cells grown heterotrophically with and without AsIII or AsV in late-log and stationary phases. qPCR was optimised and suitable reference genes were chosen. The expression of genes involved in phosphate transport, sensing As and the genes aioX, aioS, aioR (AsIII-sensing and regulation) and aioB, aioA (AsIII oxidation) and cytC (cytochrome c) were also analysed in NT-26 grown heterotrophically in the presence or absence of AsIII or AsV at different growth stages (i.e., late-log and stationary phases). -
Regulation of Cell Division in Streptococci: Comparing with the Model Rods
Curr. Issues Mol. Biol. (2019) 32: 259-326. DOI: https://dx.doi.org/10.21775/cimb.032.259 Regulation of Cell Division in Streptococci: Comparing with the Model Rods Zhenting Xiang1, Zongbo Li1, Jumei Zeng2, Yuqing Li1*, Jiyao Li1* 1State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, PR China. 2Department of Infectious Diseases, Boston Children’s Hospital, Harvard Medical School, Boston, Massachusetts, USA. *Corresponding authors: [email protected], [email protected] Abstract Streptococcus is a genus of oval-shaped bacteria that act as both commensals and pathogens. Streptococcal infections are relevant to high morbidity and huge socioeconomic costs, with drug resistant strains becoming an increasing threat. Cell division plays an essential role during streptococcal colonization and infection, rendering it an ideal target for antibiotics. Substantial progress has been made to uncover the molecular biology and cellular processes of cell division, favoring the target strategies. This review discusses recent advances in caister.com/cimb 259 Curr. Issues Mol. Biol. (2019) Vol. 32 Regulation of Cell Division Xiang et al our understanding of streptococcal cell division and its regulatory mechanisms regarding the conserved proteins, by comparing with model rods. Peptidoglycan synthesis that involved in septum formation and the maintenance of the unique oval shape have been spatiotemporally controlled in concert with the pace of division. With newly available tools of genetic and cytological study, streptococci will become an additional model bacterial system for cytokinesis and novel therapeutic agents that target cell division. Introduction Most bacteria divide into two identical progeny cells by binary fission, which requires the initial formation of a division septum. -
Elongation at Midcell in Preparation of Cell Division Requires Ftsz, but Not Mreb Nor PBP2 in Caulobacter Crescentus
fmicb-12-732031 August 23, 2021 Time: 14:48 # 1 ORIGINAL RESEARCH published: 27 August 2021 doi: 10.3389/fmicb.2021.732031 Elongation at Midcell in Preparation of Cell Division Requires FtsZ, but Not MreB nor PBP2 in Caulobacter crescentus Muriel C. F. van Teeseling1,2* 1 Junior Research Group Prokaryotic Cell Biology, Department Microbial Interactions, Institute of Microbiology, Friedrich-Schiller-Universität, Jena, Germany, 2 Department of Biology, University of Marburg, Marburg, Germany Controlled growth of the cell wall is a key prerequisite for bacterial cell division. The existing view of the canonical rod-shaped bacterial cell dictates that newborn cells first elongate throughout their side walls using the elongasome protein complex, and subsequently use the divisome to coordinate constriction of the dividing daughter cells. Interestingly, another growth phase has been observed in between elongasome- mediated elongation and constriction, during which the cell elongates from the midcell outward. This growth phase, that has been observed in Escherichia coli and Caulobacter crescentus, remains severely understudied and its mechanisms remain elusive. One pressing open question is which role the elongasome key-component Edited by: Cara C. Boutte, MreB plays in this respect. This study quantitatively investigates this growth phase in University of Texas at Arlington, C. crescentus and focuses on the role of both divisome and elongasome components. United States This growth phase is found to initiate well after MreB localizes at midcell, although it does Reviewed by: not require its presence at this subcellular location nor the action of key elongasome Saswat S. Mohapatra, Khallikote University, India components. Instead, the divisome component FtsZ seems to be required for elongation Michael J. -
Cell Structure and Function in the Bacteria and Archaea
4 Chapter Preview and Key Concepts 4.1 1.1 DiversityThe Beginnings among theof Microbiology Bacteria and Archaea 1.1. •The BacteriaThe are discovery classified of microorganismsinto several Cell Structure wasmajor dependent phyla. on observations made with 2. theThe microscope Archaea are currently classified into two 2. •major phyla.The emergence of experimental 4.2 Cellscience Shapes provided and Arrangements a means to test long held and Function beliefs and resolve controversies 3. Many bacterial cells have a rod, spherical, or 3. MicroInquiryspiral shape and1: Experimentation are organized into and a specific Scientificellular c arrangement. Inquiry in the Bacteria 4.31.2 AnMicroorganisms Overview to Bacterialand Disease and Transmission Archaeal 4.Cell • StructureEarly epidemiology studies suggested how diseases could be spread and 4. Bacterial and archaeal cells are organized at be controlled the cellular and molecular levels. 5. • Resistance to a disease can come and Archaea 4.4 External Cell Structures from exposure to and recovery from a mild 5.form Pili allowof (or cells a very to attach similar) to surfacesdisease or other cells. 1.3 The Classical Golden Age of Microbiology 6. Flagella provide motility. Our planet has always been in the “Age of Bacteria,” ever since the first 6. (1854-1914) 7. A glycocalyx protects against desiccation, fossils—bacteria of course—were entombed in rocks more than 3 billion 7. • The germ theory was based on the attaches cells to surfaces, and helps observations that different microorganisms years ago. On any possible, reasonable criterion, bacteria are—and always pathogens evade the immune system. have been—the dominant forms of life on Earth. -
Structural and Genetic Analyses Reveal the Protein Sepf As a New
Structural and genetic analyses reveal the protein PNAS PLUS SepF as a new membrane anchor for the Z ring Ramona Dumana,1, Shu Ishikawab,1, Ilkay Celikc,1, Henrik Strahlc, Naotake Ogasawarab, Paulina Troca, Jan Löwea,2, and Leendert W. Hamoenc,d,2 aMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom; bGraduate School of Information Science Functional Genomics, Nara Institute of Science and Technology, Ikoma, Nara 630-0101, Japan; cCentre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle NE2 4AX, United Kingdom; and dSwammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH, Amsterdam, The Netherlands Edited by Richard Losick, Harvard University, Cambridge, MA, and approved October 11, 2013 (received for review July 26, 2013) A key step in bacterial cell division is the polymerization of the N-terminal transmembrane domain (13). The necessity for ZipA tubulin homolog FtsZ at midcell. FtsZ polymers are anchored to the can be bypassed by a gain-of-function mutation in FtsA (14). cell membrane by FtsA and are required for the assembly of all Gram-positive bacteria contain EzrA, which shows a similar to- other cell division proteins. In Gram-positive and cyanobacteria, pology to that of ZipA, with an N-terminal transmembrane helix FtsZ filaments are aligned by the protein SepF, which in vitro pol- and a large C-terminal domain that binds to the FtsZ C terminus ymerizes into large rings that bundle FtsZ filaments. Here we de- (15). It therefore seemed likely that EzrA functions as an al- scribe the crystal structure of the only globular domain of SepF, ternative membrane anchor for the Z ring in B. -
Origin of the Chloroplast Division Mechanism by Iris Verhoek Supervisor: Ida Van Der Klei 06-01-2016
Origin of the chloroplast division mechanism By Iris Verhoek Supervisor: Ida van der Klei 06-01-2016 Abstract The chloroplast division mechanism is similar to bacterial division. Considering chloroplasts are from bacterial origin, engulfed bacteria evolved and adapted to the eukaryotic host-cell. Parts of the bacterial division components were retained and parts of the eukaryotic host-cell were integrated. The chloroplast division complex consists of four contractile rings, while the bacterial division is only comprised of one contractile ring. The first contractile ring to assemble is of bacterial origin; the FtsZ ring. Then the inner PD ring, outer PD ring and ARC5/DRP5B ring follow. The contractile rings need to be tethered to the membranes and are regulated by other proteins. The contractile rings on the inner envelope membrane are regulated by the proteins ARC6 and PARC6 and the outer envelope membrane is managed by the proteins PDV1 and PDV2. It is also very important that the contractile rings are placed on the correct division site of the chloroplast. This is directed by the proteins ARC3, minD, minE and MCD1. The membranes need to be separated for the final segregation. Proteins that are thought to be involved in this process are CLMP1 and CRL. Certain factors of the division mechanism are still not fully understood and need to be investigated. Introduction Chloroplasts are vital components that are found in plants and algae. Chloroplasts are primary plastids that are responsible for the photosynthetic conversion of carbon dioxide into carbohydrates by using light. Chloroplasts are derived from cyanobacteria through endosymbiosis. The engulfed bacterium was retained by a eukaryotic host-cell, instead of being digested. -
Gram Staining Staining & Acid Fast & Acid Fast Staining
GRAM STAINING && AACCIIDD FFAASSTT SSTTAAIINNIINNGG Dr. R. Haritha Lecturer in Biotechnology Visakha Government Degree College for Women Visakhapatnam Staining Stains Principle Types Staining methods Smear Preparation Smear- Distribution of Bacterial cells on a slide Objective-To kill the microorganism & fix bacteria Method- Air Dry, Heat Fixation GRAM STAINING Gram staining is most widely Hans Christian Joachim Gram used differential staining in Microbiology. It classifies bacteria into two major groups: Gram positive Gram negative Appears violet Appears red after Gram’s stain after Gram’s stain REAGENTS 1. CRYSTAL VIOLET Primary stain Violet colored, stains all micro-organism 2. GRAM IODINE Mordant Forms Crystal violet iodine complexes 3. DECOLORIZER Acetone + Methanol Removes Crystal violet iodine complex from thin peptidoglycan layers 4. GRAM SAFRANINE Counter stain Red colored Step 1: Crystal Violet Step 2: Gram’’s Iodine Step 3: Decolorization (Aceton-Alcohol) Step 4: Safranin Red 7 PRINCIPLE : Composition of the cell wall Gram-positive bacteria Cell wall has a thick peptidoglycan layer The Crystal Violet stain gets trapped into this layer and the bacteria turned purple. Retains the color of the primary stain (crystal violet) after decolorization with alcohol. Gram-negative bacteria Cell wall has a thin peptidoglycan layer that does not retain crystal violet stain. Cell wall has a thick lipid layer which dissolves easily upon decoulorization with Aceton-Alcohol. Therefore, cells will be counterstained with safranin and turned red. Gram’s +ve Bacteria Gram’s -ve Bacteria 9 RESULT Bacteria that manage to keep the original purple are called Gram positive. Bacteria that lose the original purple dye and can therefore take up the second red dye are called Gram negative APPLICATIONS 1.Rapid preliminary diagnosis of diseases such as Bacterial meningitis. -
Metabolic Flexibility of Enigmatic SAR324 Revealed Through
bs_bs_banner Environmental Microbiology (2014) 16(1), 304–317 doi:10.1111/1462-2920.12165 Metabolic flexibility of enigmatic SAR324 revealed through metagenomics and metatranscriptomics Cody S. Sheik,1 Sunit Jain1 and Gregory J. Dick1,2,3* deep ocean (ArÍstegui et al., 2009) is thought to constrain 1Department of Earth and Environmental Sciences and heterotrophic microbial activity. However, recent identifi- 2Center for Computational Medicine and Bioinformatics cation of carbon fixation genes in the dark ocean (> 200 m and 3Department of Ecology and Evolutionary Biology, below surface) (Swan et al., 2011) underscores auto- University of Michigan, Ann Arbor, MI 48109, USA. trophy as a metabolic strategy for many dark ocean- associated micro-organisms (Karl et al., 1984). Because autotrophy is energetically taxing (Hügler and Sievert, Summary 2011), organisms must couple carbon fixation to an Chemolithotrophy is a pervasive metabolic lifestyle electron-donating reaction such as the oxidation of for microorganisms in the dark ocean. The SAR324 ammonia, nitrite, sulfur, iron, methane, hydrogen or group of Deltaproteobacteria is ubiquitous in the formate. Yet such electron donors required to power ocean and has been implicated in sulfur oxidation and carbon fixation in the deep ocean are scarce (Reinthaler carbon fixation, but also contains genomic signatures and Van, 2010), suggesting that mixotrophy (Sorokin, of C1 utilization and heterotrophy. Here, we recon- 2003; Moran et al., 2004; Dick et al., 2008) may be nec- structed the metagenome and metatranscriptome of a essary for micro-organisms to persist until preferred population of SAR324 from a hydrothermal plume and energy sources are encountered. surrounding waters in the deep Gulf of California to Within the deep ocean, hydrothermal vents are crucial gain insight into the genetic capability and transcrip- sources of reduced compounds such as sulfur, ammonia, tional dynamics of this enigmatic group.