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The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Different Maternal Genome Donor to Kengyilia Species Inferred from Chloroplast Trnl-F Sequences
BIOLOGIA PLANTARUM 53 (4): 759-763, 2009 BRIEF COMMUNICATION Different maternal genome donor to Kengyilia species inferred from chloroplast trnL-F sequences C. ZHANG1,2, X. FAN1, H.Q. YU1, L. ZHANG3, X.L. WANG3 and Y.H. ZHOU1,2* Triticeae Research Institute1, Key Laboratory of Crop Genetic Resources and Improvement2, and College of Biology and Science3, Sichuan Agricultural University, Yaan 625014, Sichuan, P.R. China Abstract To reveal the maternal donor of species in genus Kengyilia, the chloroplast trnL-F sequences of 14 Kengyilia species and several related diploid species were analyzed by using Maximum Parsimony (MP) and Bayesian Inference (BI) methods. The species in Kengyilia were clustered in different clades, which indicated that Agropyron (P) is the likely maternal genome donor to Kengyilia melanthera, K. mutica and K. thoroldiana, while the maternal donor to Kengyilia batalinii, K. nana, K. kokonorica, K. kaschgarica, K. hirsuta, K. alatavica, K. gobicola, K. zhaosuensis, K. rigidula, K. longiglumis and K. grandiglumis was St or Y Roegneria genome. Additional key words: Agropyron, cluster analysis, phylogeny, Roegneria, StYP genomes, Triticeae. ⎯⎯⎯⎯ Kengyilia Yen et J.L. Yang is a perennial genus in Triticeae reported that Pseudoroegneria is the maternal genome (Poaceae), with about thirty species worldwide. Morpho- donor to Elymus species based on trnL-F sequences. logically, species in Kengyilia are intermediate between The chloroplast genome is maternally inherited in species of Roegneria C. Koch and Agropyron Gaertn. grasses and provides a mechanism to determine the (Yen and Yang 1990, Cai and Zhi 1999) Cytologically, direction of hybridization in polyploid evolution (Jones these species are allohexaploid grasses with StYP et al. -
Taxonomy and Phylogeny in Triticeae: a Historical Review and Current Status
Advances in Plants & Agriculture Research Review Article Open Access Taxonomy and phylogeny in Triticeae: a historical review and current status Abstract Volume 3 Issue 5 - 2016 The Triticeae is an economically important tribe within the Poaceae. Because a number of cereal crops and forage grasses belong to the tribe it has attracted much scientific Mohannad G Al–Saghir attention covering many species: taxonomy, phylogeny, genetics, cytogenetic, genome Department of Environmental and Plant Biology, Ohio analyses (crossing ability and chromosome pairing), isoenzymes, molecular biology University, USA (RFLP, RAPD, PCR sequencing) and breeding. This paper contains a brief historical outline of the taxonomy of the tribe. Phylogenetic hypotheses regarding this tribe Correspondence: Mohannad G Al–Saghir, Department of inferred from different methods, techniques and approaches, are reviewed. The Environmental and Plant Biology, Ohio University, Zanesville, different phylogenies are discussed and compared and conflicts are elucidated. Ohio, USA, Email al–[email protected] Keywords: triticeae, phylogeny, taxonomy, poaceae, perennial species, durum Received: April 23, 2016 | Published: May 10, 2016 wheat, phylogenies, genetic diversity, cytogenetics, molecular biology, chromosomes, perennial, caespitose, thizomatous species Introduction as cited above. We can therefore conclude that the most appropriate outgroup for the tribe will be Bromus. The tribe Triticeae Dum is economically the most important tribe in the grass family (Poaceae). It encompasses between 350 and 500 Definition annual or perennial species,1–3 including the important cereal crops wheat (Triticum aestivium L.), durum wheat (T. turgidum sup. durum The Triticeae encompasses annual and perennial, caespitose or (Desf. MacKay) barley (Hordeum vulgare L.), rye (Secale cereal L.) thizomatous species. -
Chloroplast Phylogenomic Analyses Resolve Multiple Origins of the Kengyilia Species Via Independent Polyploidization Events
Chloroplast phylogenomic analyses resolve multiple origins of the Kengyilia species via independent polyploidization events Shi-Yong Chen Triticeae Research Institute Hao Yan Triticeae Research Institute Li-Na Sha Triticeae Research Institute Ning Chen Triticeae Research Institute Yue Zhang Triticeae Research Institute Yi Wang Triticeae Research Institute Hou-Yang Kang Triticeae Research Institute Hai-Qin Zhang Triticeae Research Insitute Yong-Hong Zhou Triticeae Research Institute Xing Fan ( [email protected] ) Triticeae Research Institute Research article Keywords: Polyploid, Triticeae, multiple origins, maternal donor Posted Date: February 5th, 2020 DOI: https://doi.org/10.21203/rs.2.22669/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Page 1/15 Abstract Background Kengyilia is a group of allohexaploid species that arose from two hybridization events followed by genome doubling of three ancestral diploid species with different genomes St, Y and P in the wheat tribe. Estimating phylogenetic relationship in resolution of the maternal lineages has been dicult, owing to the extremely low rate of sequence divergence. Here, phylogenetic reconstructions based on the plastome sequences were used to explore the role of maternal progenitors in establishment of Kengyilia polyploid species. Results The plastome sequences of 11 Kengyilia species were analyzed together with 11 tetraploid species (PP, StP, and StY) and 33 diploid taxa representing 20 basic genomes in the Triticeae. Phylogenomic analysis and genetic divergence patterns suggested that (1) Kengyilia is closely related to Roegneria, Pseudoroegneria, Agropyron, Lophopyrum, Thinopyrum, and Dasypyrum; (2) both the StY genome Roegneria tetraploids and the PP genome Agropyron tetraploids severed as the maternal donor during the speciation of Kengyilia species; (3) the different Kengyilia species derived their StY genome from different Roegneria species. -
Managing Young Forest Habitat 2 Wildland Weed Management
Natural Resource Management Factsheet Managing Young Forest Habitat 2 Wildland Weed Management What is Young Forest? The footprint of this habitat type has been steadily decreasing the last century due to sprawl, changes in farming practices, and the influx of exotic plant Young Forest, also known as early successional species. A typical example of young forest that ‘did not habitat, is a patchy, varied community with significant happen’ is abandoned hay fields or pastures that still cover from saplings and native shrubs, some residual look like fields -grassy expanses with a few multiflora trees, native forbs and grasses, and in proximity to rose or autumn olive shrubs. They look 'wild', but have blocks of mature forest (Figure 1). It is a dynamic little to offer wildlife. forest community, changing as the woody components The first bulletin in this series, The Benefits of age. Young Forest Habitat, goes into greater depth A great number of wildlife and game species rely explaining what Young Forest is and is not, its on Young Forest at some stage in their life cycle, composition, the species that benefit, and why this including species of acute conservation concern such plant community type is often a best fit for habitat as Golden-winged Warbler (Figure 2); game species management in Pennsylvania state parks. such as American Woodcock, white-tailed deer, wild turkey, ruffed grouse, and eastern cottontail; dozens of Manage Young Forest Habitat 'less charismatic' bird and mammal species; as well as reptiles and amphibians, and countless arthropods, including many pollinator species. Young Forest has distinct habitat components we can manage. -
Vascular Plants of Santa Cruz County, California
ANNOTATED CHECKLIST of the VASCULAR PLANTS of SANTA CRUZ COUNTY, CALIFORNIA SECOND EDITION Dylan Neubauer Artwork by Tim Hyland & Maps by Ben Pease CALIFORNIA NATIVE PLANT SOCIETY, SANTA CRUZ COUNTY CHAPTER Copyright © 2013 by Dylan Neubauer All rights reserved. No part of this publication may be reproduced without written permission from the author. Design & Production by Dylan Neubauer Artwork by Tim Hyland Maps by Ben Pease, Pease Press Cartography (peasepress.com) Cover photos (Eschscholzia californica & Big Willow Gulch, Swanton) by Dylan Neubauer California Native Plant Society Santa Cruz County Chapter P.O. Box 1622 Santa Cruz, CA 95061 To order, please go to www.cruzcps.org For other correspondence, write to Dylan Neubauer [email protected] ISBN: 978-0-615-85493-9 Printed on recycled paper by Community Printers, Santa Cruz, CA For Tim Forsell, who appreciates the tiny ones ... Nobody sees a flower, really— it is so small— we haven’t time, and to see takes time, like to have a friend takes time. —GEORGIA O’KEEFFE CONTENTS ~ u Acknowledgments / 1 u Santa Cruz County Map / 2–3 u Introduction / 4 u Checklist Conventions / 8 u Floristic Regions Map / 12 u Checklist Format, Checklist Symbols, & Region Codes / 13 u Checklist Lycophytes / 14 Ferns / 14 Gymnosperms / 15 Nymphaeales / 16 Magnoliids / 16 Ceratophyllales / 16 Eudicots / 16 Monocots / 61 u Appendices 1. Listed Taxa / 76 2. Endemic Taxa / 78 3. Taxa Extirpated in County / 79 4. Taxa Not Currently Recognized / 80 5. Undescribed Taxa / 82 6. Most Invasive Non-native Taxa / 83 7. Rejected Taxa / 84 8. Notes / 86 u References / 152 u Index to Families & Genera / 154 u Floristic Regions Map with USGS Quad Overlay / 166 “True science teaches, above all, to doubt and be ignorant.” —MIGUEL DE UNAMUNO 1 ~ACKNOWLEDGMENTS ~ ANY THANKS TO THE GENEROUS DONORS without whom this publication would not M have been possible—and to the numerous individuals, organizations, insti- tutions, and agencies that so willingly gave of their time and expertise. -
15. Tribe TRITICEAE 小麦族 Xiao Mai Zu
386 POACEAE Perennial. Culms tufted, ca. 50 cm tall, ca. 5 mm in diam. narrowly lanceolate, lower glume 10–12 mm, upper glume Leaf sheaths retrorsely pubescent; leaf blades 10–20 cm × 4–10 slightly longer than lower glume; lemmas 15–20 mm, keeled, mm, pubescent. Panicle erect, rather narrow, 10–15 cm; pri- 11-veined, veins scabrid, apex mucronate; palea narrow, ca. 1/2 mary branches 3–5 cm, lower branches erect or spreading, each as long as lemma, keels ciliate. Anthers 0.3–0.6 mm. Fl. May, bearing 1 or 2 spikelets. Spikelets 20–30 × 5–8 mm, florets 9– fr. Sep. 2n = 28, 42, 58. 13, overlapping; rachilla internodes not visible; lower glume 6– Shady ditch sides, introduced. Guizhou, Hebei, Jiangsu, Nei Mon- 7 mm, upper glume ca. 8 mm, apex acuminate; lemmas 10–20 gol, Taiwan, Yunnan [native to South America]. × ca. 2.2 mm in side view, keeled, pubescent, margins mem- This species is widely introduced as a winter forage (Rescue branous, awned from apex; awn 5–7 mm. Fl. May–Jun. 2n = Grass) and is now adventive in most temperate countries. 28, 42, 56, 70. 55. Bromus carinatus Hooker & Arnott, Bot. Beechey Voy. Roadsides, forest margins, moist places, adventive. Hebei [native 403. 1840. to North America]. 显脊雀麦 xian ji que mai 54. Bromus catharticus Vahl, Symb. Bot. 2: 22. 1791. Ceratochloa carinata (Hooker & Arnott) Tutin. 扁穗雀麦 bian sui que mai Annual. Culms erect, 40–50 cm tall or more, glabrous. Bromus unioloides Kunth; Schedonorus unioloides Leaf sheaths glabrous or pubescent near mouth; leaf blades flat, (Kunth) Roemer & Schultes; Serrafalcus unioloides (Kunth) 20–30 cm × 5–10 mm, apex acuminate. -
Historical Review and Prospect of Taxonomy of Tribe Triticeae Dumortier (Poaceae)
Breeding Science 59: 513–518 (2009) Review Historical review and prospect of taxonomy of tribe Triticeae Dumortier (Poaceae) Chi Yen* and Jun Liang Yang Triticeae Research Institute, Sichuan Agricultural University, Chengdu 611130, Sichuan, The People’s Republic of China The tribe Triticeae is a taxon in the Poaceae that includes several important cereal crops and forage grasses. All its species, including those that are not used for cereals or forage, are potential sources of genes for crop and forage improvement so they all have high economic value. Taxonomic treatments, including those of the Triticeae, are the basis for identification. They are often designed to reflect phylogenetic relationships and provide a guide for germplasm utilization. Traditional taxonomic treatments of the Triticeae were based on comparative morphology and geography. Morphological characters are phenotypes of an organism, resulting from interactions between or among dominant genes and environmental factors. Morphology cannot reflect recessive inheritance. Similar environmental conditions may result in morphological convergence in distantly related taxa and different environmental conditions in morphological divergence of closely related taxa. Con- sequently, traditional morphological taxonomy may result in misclassification. Cytogenetic and/or molecular genomic analysis may reveal such mistakes. On the basis of recent genomic investigations of the Triticeae, we have recognized 30 genera in this tribe. The taxonomic changes and genomic constitution of these genera are presented in this paper. Key Words: Triticeae, genera, genomic constitution, phylogenetic relationships. Introduction Linnaeus (1753) later named them Aegilops ovata and Ae. triuncialis, respectively. These names are, however, al- The tribe Triticeae is a taxon in the Poaceae that includes ways attributed to Linnaeus because, ever since acceptance several important cereal crops and forage grasses. -
Native Plants for Wildlife Habitat and Conservation Landscaping Chesapeake Bay Watershed Acknowledgments
U.S. Fish & Wildlife Service Native Plants for Wildlife Habitat and Conservation Landscaping Chesapeake Bay Watershed Acknowledgments Contributors: Printing was made possible through the generous funding from Adkins Arboretum; Baltimore County Department of Environmental Protection and Resource Management; Chesapeake Bay Trust; Irvine Natural Science Center; Maryland Native Plant Society; National Fish and Wildlife Foundation; The Nature Conservancy, Maryland-DC Chapter; U.S. Department of Agriculture, Natural Resource Conservation Service, Cape May Plant Materials Center; and U.S. Fish and Wildlife Service, Chesapeake Bay Field Office. Reviewers: species included in this guide were reviewed by the following authorities regarding native range, appropriateness for use in individual states, and availability in the nursery trade: Rodney Bartgis, The Nature Conservancy, West Virginia. Ashton Berdine, The Nature Conservancy, West Virginia. Chris Firestone, Bureau of Forestry, Pennsylvania Department of Conservation and Natural Resources. Chris Frye, State Botanist, Wildlife and Heritage Service, Maryland Department of Natural Resources. Mike Hollins, Sylva Native Nursery & Seed Co. William A. McAvoy, Delaware Natural Heritage Program, Delaware Department of Natural Resources and Environmental Control. Mary Pat Rowan, Landscape Architect, Maryland Native Plant Society. Rod Simmons, Maryland Native Plant Society. Alison Sterling, Wildlife Resources Section, West Virginia Department of Natural Resources. Troy Weldy, Associate Botanist, New York Natural Heritage Program, New York State Department of Environmental Conservation. Graphic Design and Layout: Laurie Hewitt, U.S. Fish and Wildlife Service, Chesapeake Bay Field Office. Special thanks to: Volunteer Carole Jelich; Christopher F. Miller, Regional Plant Materials Specialist, Natural Resource Conservation Service; and R. Harrison Weigand, Maryland Department of Natural Resources, Maryland Wildlife and Heritage Division for assistance throughout this project. -
Kengyilia Zadoiensis, a New Species (Gramineae, Triticeae) from Qinghai, China
Kengyilia zadoiensis, a New Species (Gramineae, Triticeae) from Qinghai, China Wu Yu-hu Northwest Plateau Institute of Biology, Chinese Academy of Sciences, 59 Xiguan Street, Xining 810001, Qinghai, People’s Republic of China. [email protected] ABSTRACT . Kengyilia zadoiensis S. L. Lu & Y. H. florets, imbricate, often secund, 7–12 mm, excluding Wu, a new species of Gramineae from Zadoi County, awn, ashy green or fulvous; glumes broadly lanceolate, Qinghai Province, China, is described and illustrated. glabrous, 3-nerved, apex acuminate, muticous, with a The new species is related to K. kokonorica (Keng ex mucro 0.5–1 mm, without awn, with broad membra- Keng & S. L. Chen) J. L. Yang, C. Yen & B. R. Baum. nous margins, with only faint lateral nerves; proximal Kengyilia zadoiensis is distinguished by auricles on glumes ca. 4 mm, distal glumes ca. 5 mm; lemmas either side of the summit of leaf sheaths, glabrous oblong to lanceolate, densely hispid, apex awned, with glumes, muticous glumes that lack awns, lemmas that awn 4–10 mm, scabrous, erect or slightly recurved; are 7–9 mm long, with an awn 4–10 mm, and anthers callus pubescent; first lemmas 7–9 mm, paleas nearly that are yellow-green, ca. 1 mm long. subequal to lemmas, ciliate along 2 keels, but Key words: China, Gramineae, IUCN Red List, otherwise glabrous; anthers yellow-green, ca. 1 mm. Kengyilia, Qinghai, Triticeae. Only immature caryopses seen. During July and August 2005, while on an Habitat and distribution. Kengyilia zadoiensis is expedition to Lancang jiang, numerous specimens of endemic to China. -
A Checklist of Vascular Plants Endemic to California
Humboldt State University Digital Commons @ Humboldt State University Botanical Studies Open Educational Resources and Data 3-2020 A Checklist of Vascular Plants Endemic to California James P. Smith Jr Humboldt State University, [email protected] Follow this and additional works at: https://digitalcommons.humboldt.edu/botany_jps Part of the Botany Commons Recommended Citation Smith, James P. Jr, "A Checklist of Vascular Plants Endemic to California" (2020). Botanical Studies. 42. https://digitalcommons.humboldt.edu/botany_jps/42 This Flora of California is brought to you for free and open access by the Open Educational Resources and Data at Digital Commons @ Humboldt State University. It has been accepted for inclusion in Botanical Studies by an authorized administrator of Digital Commons @ Humboldt State University. For more information, please contact [email protected]. A LIST OF THE VASCULAR PLANTS ENDEMIC TO CALIFORNIA Compiled By James P. Smith, Jr. Professor Emeritus of Botany Department of Biological Sciences Humboldt State University Arcata, California 13 February 2020 CONTENTS Willis Jepson (1923-1925) recognized that the assemblage of plants that characterized our flora excludes the desert province of southwest California Introduction. 1 and extends beyond its political boundaries to include An Overview. 2 southwestern Oregon, a small portion of western Endemic Genera . 2 Nevada, and the northern portion of Baja California, Almost Endemic Genera . 3 Mexico. This expanded region became known as the California Floristic Province (CFP). Keep in mind that List of Endemic Plants . 4 not all plants endemic to California lie within the CFP Plants Endemic to a Single County or Island 24 and others that are endemic to the CFP are not County and Channel Island Abbreviations . -
Elymus Californicus
New Crop Elymus californicus California Bottlebrush Grass Jessica Jeney Image source: http://www.coastalzone-ca.com/photoalbum.htm Taxonomy Scientific name: Elymus Californicus Synonyms: Leymus californicus, Hystrix californicus Common name: California Bottlebrush Grass Family: Grasses - Poaceae Geographic Distribution Continent: North America Country: United States State: California Latitude: 48 N Altitude: 15-470 meters General Climactic Conditions: Zone 5 hardy, drought tolerant, prefers dry shade in woodland or riparian setting. Tendency to naturalize or become invasive: No tendency for invasiveness found; this plant is native and endemic to California. Image sources: http://ucjeps.berkeley.edu/cgi- bin/get_JM_treatment.pl?8738,8964,8966 and http://plants.usda.gov/core/profile?symbol=ELCA10 Native Habitat Habitat: Native and endemic to California; included on CNPS Inventory of Rare and Endangered Plants on list 4.3 for limited distribution. Riparian habitat. North Coast, Outer North Coast Ranges, n Central Coast, San Francisco Bay Area (Santa Cruz Mountains). This is a grass that prefers woodland and understory regions, thriving in dappled shade to some shade. Plant Communities: North Coastal Coniferous Forest, Closed-cone Pine Forest, Redwood Forest, Douglas-Fir Forest, Mixed Evergreen Forest, Foothill woodland Taxonomic Description Overall Plant Habit/ Description: Classified as a monocot perennial herb, Elymus californicus is a wild rye species with an upright grass with growth potential ranging from 1-2 meters in height with a nearly naked stem that occasionally bears sheathing leaves with 10-20cm blades. Gramenoid growth habit; spreads slightly from base. Root System Type: Fibrous, rhizominous Presence/Type of Underground Storage Organs: None Leaves: stiff basal sheath hairs, slender; blade 10-20mm wide and flat.