Elevated Intracellular Camp Exacerbates Vulnerability to Oxidative Stress in Optic Nerve Head Astrocytes
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Adenylate Cyclase 3: a New Target for Anti‐Obesity Drug Development
obesity reviews doi: 10.1111/obr.12430 Obesity Pharmacotherapy Adenylate cyclase 3: a new target for anti-obesity drug development L. Wu,1 C. Shen,2 M. Seed Ahmed,3 C.-G. Östenson4 and H. F. Gu5,6 1Jiangsu Key Laboratory of Drug Screening, Summary China Pharmaceutical University, Nanjing Obesity has become epidemic worldwide, and abdominal obesity has a negative im- 210009, China, 2Department of Epidemiology, pact on health. Current treatment options on obesity, however, still remain limited. School of Public Health, Nanjing Medical It is then of importance to find a new target for anti-obesity drug development University, Nanjing 211166, China, 3Unit for based upon recent molecular studies in obesity. Adenylate cyclase 3 (ADCY3) is Medical Education, Centre for Learning and the third member of adenylyl cyclase family and catalyses the synthesis of cAMP Knowledge, Department of Learning, from ATP. Genetic studies with candidate gene and genome-wide association study Informatics, Management and Ethics, approaches have demonstrated that ADCY3 genetic polymorphisms are associated Karolinska Institutet, Stockholm 17177, with obesity in European and Chinese populations. Epigenetic studies have indi- Sweden, 4Rolf Luft Center for Diabetes cated that increased DNA methylation levels in the ADCY3 gene are involved in Research and Endocrinology, Department of the pathogenesis of obesity. Furthermore, biological analyses with animal models Molecular Medicine and Surgery, Karolinska have implicated that ADCY3 dysfunction resulted in increased body weight and Institutet, Karolinska University Hospital, Solna, fat mass, while reduction of body weight is partially explained by ADCY3 activa- Stockholm 17176, Sweden, 5Department of tion. In this review, we describe genomic and biological features of ADCY3, sum- Clinical Science, Intervention and marize genetic and epigenetic association studies of the ADCY3 gene with obesity Technologies, Karolinska Institutet, Karolinska and discuss dysfunction and activation of ADCY3. -
Gene and Pathway-Based Second-Wave Analysis of Genome-Wide Association Studies
European Journal of Human Genetics (2010) 18, 111–117 & 2010 Macmillan Publishers Limited All rights reserved 1018-4813/10 $32.00 www.nature.com/ejhg ARTICLE Gene and pathway-based second-wave analysis of genome-wide association studies Gang Peng1, Li Luo2, Hoicheong Siu1, Yun Zhu1, Pengfei Hu1, Shengjun Hong1, Jinying Zhao3, Xiaodong Zhou4, John D Reveille4, Li Jin1, Christopher I Amos5 and Momiao Xiong*,2 Despite the great success of genome-wide association studies (GWAS) in identification of the common genetic variants associated with complex diseases, the current GWAS have focused on single-SNP analysis. However, single-SNP analysis often identifies only a few of the most significant SNPs that account for a small proportion of the genetic variants and offers only a limited understanding of complex diseases. To overcome these limitations, we propose gene and pathway-based association analysis as a new paradigm for GWAS. As a proof of concept, we performed a comprehensive gene and pathway-based association analysis of 13 published GWAS. Our results showed that the proposed new paradigm for GWAS not only identified the genes that include significant SNPs found by single-SNP analysis, but also detected new genes in which each single SNP conferred a small disease risk; however, their joint actions were implicated in the development of diseases. The results also showed that the new paradigm for GWAS was able to identify biologically meaningful pathways associated with the diseases, which were confirmed by a gene-set-rich analysis using gene expression -
Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase -
Functional Significance of the Adcy10-Dependent Intracellular
Journal of Cardiovascular Development and Disease Review Functional Significance of the Adcy10-Dependent Intracellular cAMP Compartments Sofya Pozdniakova 1,2,* and Yury Ladilov 1,2 1 Institute of Gender in Medicine, Center for Cardiovascular Research, Charite, 10115 Berlin, Germany; [email protected] 2 DZHK (German Center for Cardiovascular Research), Berlin Partner Site, 10115 Berlin, Germany * Correspondence: [email protected] Received: 5 March 2018; Accepted: 9 May 2018; Published: 11 May 2018 Abstract: Mounting evidence confirms the compartmentalized structure of evolutionarily conserved 30–50-cyclic adenosine monophosphate (cAMP) signaling, which allows for simultaneous participation in a wide variety of physiological functions and ensures specificity, selectivity and signal strength. One important player in cAMP signaling is soluble adenylyl cyclase (sAC). The intracellular localization of sAC allows for the formation of unique intracellular cAMP microdomains that control various physiological and pathological processes. This review is focused on the functional role of sAC-produced cAMP. In particular, we examine the role of sAC-cAMP in different cellular compartments, such as cytosol, nucleus and mitochondria. Keywords: adcy10; cAMP; phosphodiesterase; compartmentalization 1. Introduction Even though 30–50-cyclic adenosine monophosphate (cAMP) was discovered more than half a century ago, it still remains an object of scientific interest. cAMP signaling plays an important role in a wide variety of physiological processes: transcription regulation [1,2], metabolism [3,4], cell migration [5,6], mitochondrial homeostasis [7–11] (reviewed in Reference [12]), as well as cell proliferation [13] (reviewed in Reference [14]) and cell death [15] (reviewed in Reference [16]). The importance of cAMP signaling is underlined by the fact that this pathway is evolutionarily conserved and can be found in all species from microorganisms to mammals [17–19]. -
Microrna Let-7I-5P Mediates the Relationship Between Muscle Fat
www.nature.com/scientificreports OPEN microRNA let‑7i‑5p mediates the relationship between muscle fat infltration and neck pain disability following motor vehicle collision: a preliminary study James M. Elliott1,2, Cathleen A. Rueckeis3, Yue Pan3,4, Todd B. Parrish2,5, David M. Walton6 & Sarah D. Linnstaedt3,7* Persistent neck‑pain disability (PNPD) is common following traumatic stress exposures such as motor vehicle collision (MVC). Substantial literature indicates that fat infltration into neck muscle (MFI) is associated with post‑MVC PNPD. However, little is known about the molecular mediators underlying this association. In the current study, we assessed whether microRNA expression signatures predict PNPD and whether microRNA mediate the relationship between neck MFI and PNPD. A nested cohort of 43 individuals from a longitudinal study of MVC survivors, who provided blood (PAXgene RNA) and underwent magnetic resonance imaging (MRI), were included in the current study. Peritraumatic microRNA expression levels were quantifed via small RNA sequencing, neck MFI via MRI, and PNPD via the Neck Disability Index two‑weeks, three‑months, and twelve‑months following MVC. Repeated measures regression models were used to assess the relationship between microRNA and PNPD and to perform mediation analyses. Seventeen microRNA predicted PNPD following MVC. One microRNA, let‑7i‑5p, mediated the relationship between neck MFI and PNPD. Peritraumatic blood‑ based microRNA expression levels predict PNPD following MVC and let‑7i‑5p might contribute to the underlying efects of neck MFI on persistent disability. In conclusion, additional studies are needed to validate this fnding. While most individuals recover following traumatic stress exposures such as motor vehicle collision (MVC), a substantial subset develop adverse posttraumatic neuropsychiatric sequelae such as persistent neck pain and persistent neck-pain related disability (PNPD)1–4, which is typically measured by a self-report region-specifc disability scale (such as the Neck Disability Index (NDI)5). -
Increased Plasma Levels of Adenylate Cyclase 8 and Camp Are Associated with Obesity and Type 2 Diabetes: Results from a Cross-Sectional Study
biology Article Increased Plasma Levels of Adenylate Cyclase 8 and cAMP Are Associated with Obesity and Type 2 Diabetes: Results from a Cross-Sectional Study 1, 2, , 2, 2 Samy M. Abdel-Halim y, Ashraf Al Madhoun * y , Rasheeba Nizam y, Motasem Melhem , Preethi Cherian 3, Irina Al-Khairi 3, Dania Haddad 2, Mohamed Abu-Farha 3 , Jehad Abubaker 3, Milad S. Bitar 4 and Fahd Al-Mulla 2,* 1 Department of Oncology, Karolinska University Hospital, 17177 Stockholm, Sweden; [email protected] 2 Department of Genetics and Bioinformatics, Dasman Diabetes Institute, Dasman 15462, Kuwait; [email protected] (R.N.); [email protected] (M.M.); [email protected] (D.H.) 3 Department of Biochemistry and Molecular Biology, Dasman Diabetes Institute, Dasman 15462, Kuwait; [email protected] (P.C.); [email protected] (I.A.-K.); [email protected] (M.A.-F.); [email protected] (J.A.) 4 Department of Pharmacology and Toxicology, Faculty of Medicine, Kuwait University, Jabriya 046302, Kuwait; [email protected] * Correspondence: [email protected] (A.A.M.); [email protected] (F.A.-M.); Tel.: +965-2224-2999 (ext. 2805) (A.A.M.); +965-6777-1040 (F.A.-M.) These authors equally contributed to this work. y Received: 5 July 2020; Accepted: 20 August 2020; Published: 24 August 2020 Abstract: Adenylate cyclases (ADCYs) catalyze the conversion of ATP to cAMP,an important co-factor in energy homeostasis. Giving ADCYs role in obesity, diabetes and inflammation, we questioned whether calcium-stimulated ADCY isoforms may be variably detectable in human plasma. -
ADCY10 Frameshift Variant Leading to Severe Recessive
Human Reproduction, Vol.34, No.6, pp. 1155–1164, 2019 Advance Access Publication on May 23, 2019 doi:10.1093/humrep/dez048 ORIGINAL ARTICLE Reproductive genetics ADCY10 frameshift variant leading to severe recessive asthenozoospermia Downloaded from https://academic.oup.com/humrep/article-abstract/34/6/1155/5492390 by Promedica Health System user on 20 July 2019 and segregating with absorptive hypercalciuria Arvand Akbari1,2, Giovanni Battista Pipitone3, Zahra Anvar4,5, Mojtaba Jaafarinia1,2, Maurizio Ferrari3,6,7, Paola Carrera3,6,*, and Mehdi Totonchi8,9,* 1Department of Biology, Faculty of Science, Fars Science and Research Branch, Islamic Azad University, Marvdasht, Iran 2Department of Biology, Faculty of Science, Marvdasht Branch, Islamic Azad University, Marvdasht, Iran 3Laboratory of Clinical Molecular Biology and Cytogenetics, IRCCS San Raffaele Hospital, Milan, Italy 4Infertility Research Center, Shiraz University of Medical Sciences, Shiraz, Iran 5Department of Obstetrics & Gynecology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran 6Genomic Unit for the Diagnosis of Human Disorders, Division of Genetics and Cell Biology, IRCCS San Raffaele Hospital, Milan, Italy 7Vita-Salute San Raffaele University, Milan, Italy 8Department of Genetics, Reproductive Biomedicine Research Center, Royan Institute for Reproductive Biomedicine, ACECR, Tehran, Iran 9Department of Stem Cells and Developmental Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran *Correspondence -
Loss-Of-Function Variants in ADCY3 Increase Risk of Obesity and Type 2 Diabetes
BRIEF COMMUNICATION https://doi.org/10.1038/s41588-017-0022-7 Loss-of-function variants in ADCY3 increase risk of obesity and type 2 diabetes Niels Grarup 1, Ida Moltke 2, Mette K. Andersen 1, Maria Dalby2, Kristoffer Vitting-Seerup2,3, Timo Kern1, Yuvaraj Mahendran1, Emil Jørsboe 2, Christina V. L. Larsen4,5, Inger K. Dahl-Petersen4, Arthur Gilly6, Daniel Suveges6, George Dedoussis7, Eleftheria Zeggini 6, Oluf Pedersen1, Robin Andersson 2, Peter Bjerregaard4,5, Marit E. Jørgensen4,5,8*, Anders Albrechtsen 2* and Torben Hansen 1,9* We have identified a variant in ADCY3 (encoding adenylate carriers had type 2 diabetes (P = 7.8 × 10−5; Table 1), while one had cyclase 3) associated with markedly increased risk of obesity impaired fasting glucose and one had impaired glucose tolerance. and type 2 diabetes in the Greenlandic population. The variant Notably, the association with type 2 diabetes remained significant disrupts a splice acceptor site, and carriers have decreased after adjustment for BMI (P = 6.5 × 10−4), suggesting that it is not ADCY3 RNA expression. Additionally, we observe an enrich- simply mediated by increased BMI. The effects on BMI and type 2 ment of rare ADCY3 loss-of-function variants among indi- diabetes were also observed, although with smaller sizes, when data viduals with type 2 diabetes in trans-ancestry cohorts. These were analyzed according to an additive genetic model (Table 1). findings provide new information on disease etiology relevant However, when we compared the recessive and additive models for future treatment strategies. with the full genotype model, we rejected the additive model (BMI, Identification of homozygous loss-of-function mutations in P = 0.002; type 2 diabetes, P = 0.004) but not the recessive model humans may readily provide information about the biological (BMI, P = 0.17; type 2 diabetes, P = 0.095). -
Therapeutic Opportunities in Colon Cancer Focus on Phosphodiesterase Inhibitors
Life Sciences 230 (2019) 150–161 Contents lists available at ScienceDirect Life Sciences journal homepage: www.elsevier.com/locate/lifescie Review article Therapeutic opportunities in colon cancer: Focus on phosphodiesterase inhibitors T ⁎ Ankita Mehta, Bhoomika M. Patel Institute of Pharmacy, Nirma University, Ahmedabad, India ARTICLE INFO ABSTRACT Keywords: Despite novel technologies, colon cancer remains undiagnosed and 25% of patients are diagnosed with meta- Phosphodiesterases static colon cancer. Resistant to chemotherapeutic agents is one of the major problems associated with treating cAMP colon cancer which creates the need to develop novel agents targeting towards newer targets. A phosphodies- cGMP terase is a group of isoenzyme, which, hydrolyze cyclic nucleotides and thereby lowers intracellular levels of Adenylate cyclase cAMP and cGMP leading to tumorigenic effects. Many in vitro and in vivo studies have confirmed increased PDE Guanylate cyclase expression in different types of cancers including colon cancer. cAMP-specific PDE inhibitors increase in- Colon cancer tracellular cAMP that leads to activation of effector molecules-cAMP-dependent protein kinase A, exchange protein activated by cAMP and cAMP gated ion channels. These molecules regulate cellular responses and exert its anticancer role through different mechanisms including apoptosis, inhibition of angiogenesis, upregulating tumor suppressor genes and suppressing oncogenes. On the other hand, cGMP specific PDE inhibitors exhibit anticancer effects through cGMP dependent protein kinase and cGMP dependent cation channels. Elevation in cGMP works through activation of caspases, suppression of Wnt/b-catenin pathway and TCF transcription leading to inhibition of CDK and survivin. These studies point out towards the fact that PDE inhibition is as- sociated with anti-proliferative, anti-apoptotic and anti-angiogenic pathways involved in its anticancer effects in colon cancer. -
Soluble Adenylyl Cyclase Inhibition Prevents Human Sperm Functions Essential for Fertilization
bioRxiv preprint doi: https://doi.org/10.1101/2021.04.27.441671; this version posted April 28, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Soluble adenylyl cyclase inhibition prevents human sperm functions essential for fertilization Melanie Balbach1, Lubna Ghanem1, Thomas Rossetti1, Navpreet Kaur1, Carla Ritagliati1,3, Jacob Ferreira1, Dario Krapf3, Lis C Puga Molina4, Celia Maria Santi4, Jan Niklas Hansen5, Dagmar Wachten5, Makoto Fushimi2, Peter T. Meinke1,2, Jochen Buck1 & Lonny R. Levin1 1Department of Pharmacology, Weill Cornell Medicine, New York City, NY 2Tri-Institutional Therapeutics Discovery Institute, New York City, NY 3Laboratory of Cell Signal Transduction Networks, Instituto de Biología Molecular y Celular de Rosario, Rosario, Argentina 4Department of OB/GYN, Washington University School of Medicine, Saint Louis, Missouri 5Institute of Innate Immunity, Biophysical Imaging, Medical Faculty, University of Bonn, Bonn, Germany To whom correspondence should be addressed: Dr. Lonny R. Levin, Department of Pharmacology, Weill Cornell Medicine, 1300 York Avenue, New York City, NY, 10065; phone: +1 212 746 6752, email: [email protected] bioRxiv preprint doi: https://doi.org/10.1101/2021.04.27.441671; this version posted April 28, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Abstract 2 Soluble adenylyl cyclase (sAC: ADCY10) is essential for activating dormant sperm. Studies of 3 freshly dissected mouse sperm identified sAC as needed for initiating capacitation and activating 4 motility. -
Targeting the Sac-Dependent Camp Pool to Prevent SARS-Cov-2 Infection
cells Review Targeting the sAC-Dependent cAMP Pool to Prevent SARS-Cov-2 Infection Muhammad Aslam 1,2 and Yury Ladilov 3,* 1 Experimental Cardiology, Department of Internal Medicine, Justus Liebig University, 35392 Giessen, Germany; [email protected] 2 DZHK (German Centre for Cardiovascular Research), Department of Cardiology, Kerckhoff Clinic GmbH partner site Rhein-Main, 61231 Bad Nauheim, Germany 3 Independent Researcher, 42929 Wermelskirchen, Germany * Correspondence: [email protected] Received: 27 July 2020; Accepted: 24 August 2020; Published: 25 August 2020 Abstract: An outbreak of the novel coronavirus (CoV) SARS-CoV-2, the causative agent of COVID-19 respiratory disease, infected millions of people since the end of 2019, led to high-level morbidity and mortality and caused worldwide social and economic disruption. There are currently no antiviral drugs available with proven efficacy or vaccines for its prevention. An understanding of the underlying cellular mechanisms involved in virus replication is essential for repurposing the existing drugs and/or the discovery of new ones. Endocytosis is the important mechanism of entry of CoVs into host cells. Endosomal maturation followed by the fusion with lysosomes are crucial events in endocytosis. Late endosomes and lysosomes are characterized by their acidic pH, which is generated by a proton transporter V-ATPase and required for virus entry via endocytic pathway. The cytoplasmic cAMP pool produced by soluble adenylyl cyclase (sAC) promotes V-ATPase recruitment to endosomes/lysosomes and thus their acidification. In this review, we discuss targeting the sAC-specific cAMP pool as a potential strategy to impair the endocytic entry of the SARS-CoV-2 into the host cell. -
Systematic Elucidation of Neuron-Astrocyte Interaction in Models of Amyotrophic Lateral Sclerosis Using Multi-Modal Integrated Bioinformatics Workflow
ARTICLE https://doi.org/10.1038/s41467-020-19177-y OPEN Systematic elucidation of neuron-astrocyte interaction in models of amyotrophic lateral sclerosis using multi-modal integrated bioinformatics workflow Vartika Mishra et al.# 1234567890():,; Cell-to-cell communications are critical determinants of pathophysiological phenotypes, but methodologies for their systematic elucidation are lacking. Herein, we propose an approach for the Systematic Elucidation and Assessment of Regulatory Cell-to-cell Interaction Net- works (SEARCHIN) to identify ligand-mediated interactions between distinct cellular com- partments. To test this approach, we selected a model of amyotrophic lateral sclerosis (ALS), in which astrocytes expressing mutant superoxide dismutase-1 (mutSOD1) kill wild-type motor neurons (MNs) by an unknown mechanism. Our integrative analysis that combines proteomics and regulatory network analysis infers the interaction between astrocyte-released amyloid precursor protein (APP) and death receptor-6 (DR6) on MNs as the top predicted ligand-receptor pair. The inferred deleterious role of APP and DR6 is confirmed in vitro in models of ALS. Moreover, the DR6 knockdown in MNs of transgenic mutSOD1 mice attenuates the ALS-like phenotype. Our results support the usefulness of integrative, systems biology approach to gain insights into complex neurobiological disease processes as in ALS and posit that the proposed methodology is not restricted to this biological context and could be used in a variety of other non-cell-autonomous communication