Src-Family and Syk Kinases in Activating and Inhibitory Pathways in Innate Immune Cells: Signaling Cross Talk
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Review Tec Kinases: a Family with Multiple Roles in Immunity
Immunity, Vol. 12, 373±382, April, 2000, Copyright 2000 by Cell Press Tec Kinases: A Family Review with Multiple Roles in Immunity Wen-Chin Yang,*³§ Yves Collette,*³ inositol phosphates, but they are thought to be relevant Jacques A. NuneÁ s,*³ and Daniel Olive*² for binding of PtdIns lipids to the same sites. In most *INSERM U119 cases, PH domains bind preferentially to PtdIns (4,5)P2 Universite de la Me diterrane e and inositol (1,4,5) P3 (Ins (1,4,5) P3). However, the Btk 13009 Marseille PH domain binds PtdIns (3,4,5)P3 and Ins (1, 3, 4, 5)P4 France the tightest. PtdIns (3, 4, 5)P3, one of the products of the action of PI3K, is thought to act as a second messen- ger to recruit regulatory proteins to the plasma mem- brane via their PH domains (see below). Many of the Antigen receptors on T, B, and mast cells are multimo- mutations in Btk that lead to XLA are point mutations lecular complexes that are activated by interactions with that cluster at one end of the PH domain and could be external signals. These signals are then transmitted to predicted to impair binding to Ins (3,4,5)P (for review regulate gene expression and posttranscriptional modi- 3 see Satterthwaite et al., 1998a) (Figure 1b). Similarly, fications. Nonreceptor tyrosine kinases (NRTK) are key CBA/N xid mice carry an R28C mutation in the Btk PH players that relay and integrate these signals. NRTK are domain. The recent structure of the PH domain from divided into distinct families defined by a prototypic Btk complexed with Ins (1,3,4,5)P4 provides an explana- member: Src, Tec, Syk, Csk, Fes, Abl, Jak, Fak, Ack, tion for several mutations associated with XLA: mis- Brk, and Srm (Bolen and Brugge, 1997). -
Evidence for an Interaction Between the Insulin Receptor and Grb7. a Role for Two of Its Binding Domains, PIR and SH2
Oncogene (2000) 19, 2052 ± 2059 ã 2000 Macmillan Publishers Ltd All rights reserved 0950 ± 9232/00 $15.00 www.nature.com/onc Evidence for an interaction between the insulin receptor and Grb7. A role for two of its binding domains, PIR and SH2 Anne Kasus-Jacobi1,2,3,Ve ronique Be re ziat1,3, Dominique Perdereau1, Jean Girard1 and Anne-FrancËoise Burnol*,1 1Endocrinologie MeÂtabolisme et DeÂveloppement, CNRS, UPR 1524, 9 rue Jules Hetzel, 92190 Meudon, France The molecular adapter Grb7 is likely to be implicated in new family of adapters has recently emerged, the Grb7 the development of certain cancer types. In this study we family of proteins, comprising Grb7, Grb10 and show that Grb7 binds the insulin receptors, when they Grb14. The members of this family were originally are activated and tyrosine phosphorylated. This interac- cloned by interaction with EGF receptor, using the tion is documented by two-hybrid experiments, GST CORT (cloning of receptor target) system (Daly et al., pull-down assays and in vivo coimmunoprecipitations. In 1996; Margolis, 1994; Ooi et al., 1995), and the use of addition, our results argue in favor of a preferential the yeast two-hybrid technology has emphasized their association between Grb7 and the insulin receptors when implication in signal transduction (Daly, 1998). These compared to other tyrosine kinase receptors like the adapters bind also other tyrosine kinase receptors, like EGF receptor, the FGF receptor and Ret. Interestingly, erbB2, Ret, Elk, PDGF receptors, insulin receptors and Grb7 is not a substrate of the insulin receptor tyrosine IGF-1 receptors (Daly et al., 1996; Dey et al., 1996; kinase activity. -
Lipid-Targeting Pleckstrin Homology Domain Turns Its Autoinhibitory Face Toward the TEC Kinases
Lipid-targeting pleckstrin homology domain turns its autoinhibitory face toward the TEC kinases Neha Amatyaa, Thomas E. Walesb, Annie Kwonc, Wayland Yeungc, Raji E. Josepha, D. Bruce Fultona, Natarajan Kannanc, John R. Engenb, and Amy H. Andreottia,1 aRoy J. Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA 50011; bDepartment of Chemistry and Chemical Biology, Northeastern University, Boston, MA 02115; and cInstitute of Bioinformatics and Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602 Edited by Natalie G. Ahn, University of Colorado Boulder, Boulder, CO, and approved September 17, 2019 (received for review May 3, 2019) The pleckstrin homology (PH) domain is well known for its phos- activation loop phosphorylation site are also controlled by noncatalytic pholipid targeting function. The PH-TEC homology (PHTH) domain domains (17). In addition to the N-terminal PHTH domain, the within the TEC family of tyrosine kinases is also a crucial component TEC kinases contain a proline-rich region (PRR) and Src ho- of the autoinhibitory apparatus. The autoinhibitory surface on the mology 3 (SH3) and Src homology 2 (SH2) domains that impinge PHTH domain has been previously defined, and biochemical investi- on the kinase domain to alter the conformational ensemble and gations have shown that PHTH-mediated inhibition is mutually thus the activation status of the enzyme. A crystal structure of the exclusive with phosphatidylinositol binding. Here we use hydrogen/ BTK SH3-SH2-kinase fragment has been solved (10) showing that deuterium exchange mass spectrometry, nuclear magnetic resonance the SH3 and SH2 domains of BTK assemble onto the distal side of (NMR), and evolutionary sequence comparisons to map where and the kinase domain (the surface opposite the activation loop), how the PHTH domain affects the Bruton’s tyrosine kinase (BTK) stabilizing the autoinhibited form of the kinase in a manner similar domain. -
Signal Adaptor DAP10 Associates with MDL-1 and Triggers Osteoclastogenesis in Cooperation with DAP12
Signal adaptor DAP10 associates with MDL-1 and triggers osteoclastogenesis in cooperation with DAP12 Masanori Inuia,1, Yuki Kikuchia,1, Naoko Aokib, Shota Endoa, Tsutomu Maedaa, Akiko Sugahara-Tobinaia, Shion Fujimuraa, Akira Nakamuraa, Atsushi Kumanogohc, Marco Colonnad, and Toshiyuki Takaia,2 aDepartment of Experimental Immunology, Institute of Development, Aging and Cancer, Tohoku University, Seiryo 4-1, Sendai 980-8575, Japan; bDepartment of Pathology, Asahikawa Medical College, Higashi 2-1-1, Midorigaoka, Asahikawa 078-8510, Japan; cDepartment of Immunopathology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka 565-0871, Japan; and dDepartment of Pathology and Immunology, Washington University School of Medicine, 660 South Euclid, St. Louis, MO 63110 Communicated by Jeffrey V. Ravetch, The Rockfeller University, New York, NY, January 22, 2009 (received for review May 14, 2008) Osteoclasts, cells of myeloid lineage, play a unique role in bone the Ig superfamily or C-type lectin family. They primarily mediate resorption, maintaining skeletal homeostasis in concert with bone- a Src-family kinase-initiated activation signal, leading to a series of producing osteoblasts. Osteoclast development and maturation (os- events including Syk kinase recruitment, triggering of calcium teoclastogenesis) is driven by receptor activator of NF-B ligand and signaling mediated by phospholipase C␥ (PLC␥), and activation of macrophage-colony stimulating factor and invariably requires a sig- the MAPK cascade, culminating in cell proliferation and cytokine nal initiated by immunoreceptor tyrosine-based activation motif production as the output of cellular responses. In osteoclast pre- (ITAM)-harboring Fc receptor common ␥ chain or DNAX-activating cursor cells, FcR␥ and DAP12 associate with several cognate protein (DAP)12 (also referred to as KARAP or TYROBP) that associates cell-surface immunoreceptors (9) such as osteoclast-associated with the cognate immunoreceptors. -
Insulin Receptor Membrane Retention by a Traceable Chimeric Mutant Jimena Giudice1,2,4, Elizabeth a Jares-Erijman2ˆ and Federico Coluccio Leskow1,3*
Giudice et al. Cell Communication and Signaling 2013, 11:45 http://www.biosignaling.com/content/11/1/45 RESEARCH Open Access Insulin receptor membrane retention by a traceable chimeric mutant Jimena Giudice1,2,4, Elizabeth A Jares-Erijman2ˆ and Federico Coluccio Leskow1,3* Abstract Background: The insulin receptor (IR) regulates glucose homeostasis, cell growth and differentiation. It has been hypothesized that the specific signaling characteristics of IR are in part determined by ligand-receptor complexes localization. Downstream signaling could be triggered from the plasma membrane or from endosomes. Regulation of activated receptor's internalization has been proposed as the mechanism responsible for the differential isoform and ligand-specific signaling. Results: We generated a traceable IR chimera that allows the labeling of the receptor at the cell surface. This mutant binds insulin but fails to get activated and internalized. However, the mutant heterodimerizes with wild type IR inhibiting its auto-phosphorylation and blocking its internalization. IR membrane retention attenuates AP-1 transcriptional activation favoring Akt activation. Conclusions: These results suggest that the mutant acts as a selective dominant negative blocking IR internalization-mediated signaling. Keywords: Insulin receptor, Membrane retention, Dominant negative, Endocytosis Background events between the two isoforms, indicating specific Insulin receptor (IR) is a tetrameric tyrosine kinase re- functions [13-15]. Using an elegant harmonic oscillator ceptor involved on glucose homeostasis, cell growth and mathematical model, Knudson et al. reported that insu- differentiation. Two IR variants are produced in mam- lin has 1.5-fold higher affinity and a 2-fold higher dis- mals by alternative splicing: IR-A lacking exon 11 and sociation rate for IR-A, than for IR-B [16]. -
Hepatocyte Growth Factor: a Regulator of Inflammation and Autoimmunity
Autoimmunity Reviews 14 (2015) 293–303 Contents lists available at ScienceDirect Autoimmunity Reviews journal homepage: www.elsevier.com/locate/autrev Review Hepatocyte growth factor: A regulator of inflammation and autoimmunity Nicolas Molnarfi a,b,1, Mahdia Benkhoucha a,b,1, Hiroshi Funakoshi d, Toshikazu Nakamura e, Patrice H. Lalive a,b,c,⁎ a Department of Pathology and Immunology, Faculty of Medicine, University of Geneva, Geneva, Switzerland b Department of Clinical Neurosciences, Division of Neurology, Unit of Neuroimmunology and Multiple Sclerosis, University Hospital of Geneva, Geneva, Switzerland c Department of Genetics and Laboratory Medicine, Laboratory Medicine Service, University Hospital of Geneva, Geneva, Switzerland d Center for Advanced Research and Education, Asahikawa Medical University, Asahikawa, Japan e Neurogen Inc., Nakahozumi, Ibaraki, Osaka, Japan article info abstract Article history: Hepatocyte growth factor (HGF) is a pleiotropic cytokine that has been extensively studied over several decades, Received 20 November 2014 but was only recently recognized as a key player in mediating protection of many types of inflammatory and au- Accepted 25 November 2014 toimmune diseases. HGF was reported to prevent and attenuate disease progression by influencing multiple Available online 1 December 2014 pathophysiological processes involved in inflammatory and immune response, including cell migration, matura- tion, cytokine production, antigen presentation, and T cell effector function. In this review, we discuss the actions Keywords: fl HGF and mechanisms of HGF in in ammation and immunity and the therapeutic potential of this factor for the treat- fl c-Met ment of in ammatory and autoimmune diseases. Inflammation © 2014 Elsevier B.V. All rights reserved. Autoimmunity Autoimmune regulator Therapy Contents 1. -
Regulation of Hematopoietic Stem Cells by the Steel Factor/KIT
Molecular Pathways Regulation of Hematopoietic Stem Cells by the Steel Factor/KIT Signaling Pathway David Kent, Michael Copley, Claudia Benz, Brad Dykstra, Michelle Bowie, and Connie Eaves Abstract Understanding the intrinsic pathways that regulate hematopoietic stem cell (HSC) proliferation and self-renewal responses to external signals offers a rational approach to developing improved strategies for HSC expansion for therapeutic applications. Such studies are also likely to reveal new targets for the treatment of human myeloid malignancies because perturbations of the biological processes that control normal HSC self-renewal divisions are believed to drive the propagation of many of these diseases. Here, we review recent findings that point to the impor- tance of using stringent functional criteria to define HSCs as cells with longterm repopulating activity and evidence that activation of the KITreceptor and many downstream effectors serve as major regulators of changing HSC proliferative and self-renewal behavior during development. Background the discovery of a rare subset of cells in mice that generate multilineage clones in the spleen of myeloablated recipients Hematopoietic stem cells (HSC) constitute a rare, self- and that are sustained throughout life (10). The finding that sustaining population that appears early in the development these ‘‘colony-forming units spleen’’ are present in all hemato- of the embryo and is then responsible for mature blood cell poietic tissues and exhibit some self-renewal activity when production throughout life. HSC numbers can be regulated serially transplanted led to their use as a tool for establishing extrinsically by three mechanisms: (a) altered exposure to many basic principles expected of an HSC population. -
Distinct Gene Expression Pathways in Islets from Individuals with Short- and Long
Mastracci Teresa (Orcid ID: 0000-0003-1956-1951) Distinct Gene Expression Pathways in Islets from Individuals with Short- and Long- Duration Type 1 Diabetes Teresa L. Mastracci1,2*, Jean-Valery Turatsinze3, Benita K. Book4, Ivan A. Restrepo5, Michael J. Pugia1, Eric A. Wiebke4, Mark D. Pescovitz4, Decio L. Eizirik3 and Raghavendra G. Mirmira2,5,6,7 1 Indiana Biosciences Research Institute, Indianapolis, IN, USA. 2 Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN, USA. 3 ULB Center for Diabetes Research, Universite Libre de Bruxelles, Brussels, Belgium. 4 Department of Surgery, Indiana University School of Medicine, Indianapolis, IN, USA. 5 Center for Diabetes and Metabolic Diseases, Indiana University School of Medicine, Indianapolis, IN, USA. 6 Department of Pediatrics, Indiana University School of Medicine, Indianapolis, IN, USA. 7 Department of Medicine, Indiana University School of Medicine, Indianapolis, IN, USA. * Corresponding Author: Teresa L. Mastracci, 1345 W. 16th St., Suite 300, Indianapolis, IN 46202 USA. E-mail: [email protected] Running Title: Functional Genomics Analysis of T1D Islets Abstract word count: 272 This is the author's manuscript of the article published in final edited form as: Mastracci, T. L., Turatsinze, J.-V., Book, B. K., Restrepo, I. A., Pugia, M. J., Wiebke, E. A., … Mirmira, R. G. (n.d.). Distinct Gene Expression Pathways in Islets from Individuals with Short‐ and Long‐Duration Type 1 Diabetes. Diabetes, Obesity and Metabolism. https://doi.org/10.1111/dom.13298 Main text word count: 2730 References: 27; Tables: 2; Figures: 3 Abstract Aims: Our current understanding of the pathogenesis of type 1 diabetes (T1D) arose in large part from studies using the non-obese diabetic (NOD) mouse model. -
Protein Tyrosine Kinases: Their Roles and Their Targeting in Leukemia
cancers Review Protein Tyrosine Kinases: Their Roles and Their Targeting in Leukemia Kalpana K. Bhanumathy 1,*, Amrutha Balagopal 1, Frederick S. Vizeacoumar 2 , Franco J. Vizeacoumar 1,3, Andrew Freywald 2 and Vincenzo Giambra 4,* 1 Division of Oncology, College of Medicine, University of Saskatchewan, Saskatoon, SK S7N 5E5, Canada; [email protected] (A.B.); [email protected] (F.J.V.) 2 Department of Pathology and Laboratory Medicine, College of Medicine, University of Saskatchewan, Saskatoon, SK S7N 5E5, Canada; [email protected] (F.S.V.); [email protected] (A.F.) 3 Cancer Research Department, Saskatchewan Cancer Agency, 107 Wiggins Road, Saskatoon, SK S7N 5E5, Canada 4 Institute for Stem Cell Biology, Regenerative Medicine and Innovative Therapies (ISBReMIT), Fondazione IRCCS Casa Sollievo della Sofferenza, 71013 San Giovanni Rotondo, FG, Italy * Correspondence: [email protected] (K.K.B.); [email protected] (V.G.); Tel.: +1-(306)-716-7456 (K.K.B.); +39-0882-416574 (V.G.) Simple Summary: Protein phosphorylation is a key regulatory mechanism that controls a wide variety of cellular responses. This process is catalysed by the members of the protein kinase su- perfamily that are classified into two main families based on their ability to phosphorylate either tyrosine or serine and threonine residues in their substrates. Massive research efforts have been invested in dissecting the functions of tyrosine kinases, revealing their importance in the initiation and progression of human malignancies. Based on these investigations, numerous tyrosine kinase inhibitors have been included in clinical protocols and proved to be effective in targeted therapies for various haematological malignancies. -
Assembly of High-Affinity Insulin Receptor Agonists and Antagonists from Peptide Building Blocks
Assembly of high-affinity insulin receptor agonists and antagonists from peptide building blocks Lauge Scha¨ ffer*†, Renee E. Brissette‡, Jane C. Spetzler*, Renuka C. Pillutla‡, Søren Østergaard*, Michael Lennick‡, Jakob Brandt*, Paul W. Fletcher‡, Gillian M. Danielsen*, Ku-Chuan Hsiao‡, Asser S. Andersen*, Olga Dedova‡, Ulla Ribel*, Thomas Hoeg-Jensen*, Per Hertz Hansen*, Arthur J. Blume‡, Jan Markussen*, and Neil I. Goldstein‡ *Novo Nordisk A͞S, DK-2800 Bagsvaerd, Denmark; and ‡DGI BioTechnologies, Edison, NJ 08818 Edited by Donald F. Steiner, University of Chicago, Chicago, IL, and approved February 26, 2003 (received for review January 3, 2003) Insulin is thought to elicit its effects by crosslinking the two Materials and Methods extracellular ␣-subunits of its receptor, thereby inducing a confor- Solid-Phase Peptide Synthesis. Peptides were synthesized manually mational change in the receptor, which activates the intracellular or on an Advanced ChemTech 396 synthesizer. Synthesis was tyrosine kinase signaling cascade. Previously we identified a series performed on TentaGel S RAM resin (Rapp Polymere, Tu¨- of peptides binding to two discrete hotspots on the insulin recep- bingen, Germany). Fluorenylmethoxycarbonyl amino acids pur- tor. Here we show that covalent linkage of such peptides into chased from Novabiochem were coupled by using a diisopropyl- homodimers or heterodimers results in insulin agonists or antag- carbodiimide͞1-hydroxy-7-azabenzotriazole coupling strategy. onists, depending on how the peptides are linked. An optimized Peptides were cleaved as amides from the resin by using 90% agonist has been shown, both in vitro and in vivo, to have a trifluoroacetic acid, 5% triisopropylsilane, 3% thioanisol, and potency close to that of insulin itself. -
Supplementary Materials
Supplementary Materials Supplemental Figure S1. Distinct difference in expression of 576 sensome genes comparing cortex versus microglia. (A) This heatmap shows all 576 sensome candidate genes ordered by DE and with the left column shows if the gene is present in the “Hickman et al. sensome” Supplemental Figure S2. Mouse sensome and human sensome genes categorized by group. (A) Bar graph showing the number of mouse and human sensome genes per group (Cell-Cell Interactions, Chemokine and related receptors, Cytokine receptors, ECM receptors, Endogenous ligands receptors, sensors and transporters, Fc receptors, Pattern recognition and related receptors, Potential sensors but no known ligands and Purinergic and related receptors). Supplementary Figure S3. Overlap of ligands recognized by microglia sensome (A) Overlap between the ligands of the receptors from respectively human and mouse core sensome was shown using Venn Diagrams. (B) Ligands of human and mouse receptors categorized in groups (Glycoproteins, Cytokines, Immunoglobulin, Amino acids, Carbohydrates, Electrolytes, Lipopeptides, Chemokines, Neuraminic acids, Nucleic acids, Receptors, Lipids, Fatty acids, Leukotrienes, Hormones, Steroids and Phospholipids) and spread of different groups shown as parts of whole again highlighting that the distribution of ligands what the human and mouse sensome genes can sense (Categorization of ligands in Supplementary Table S1). Supplementary Figure S4. Microglia core sensome expression during aging. (A) Two-log fold change of microglia core sensome genes in aging mice derived from Holtman et al. [12]. (B) Accelerated aging model (ERCC1), with impaired DNA repair mechanism, shows changes of microglia core sensome expression [12]. (C) Microglia core sensome expression during aging in human derived from Olah et al. -
A Transcriptomic Atlas of Aged Human Microglia
ARTICLE DOI: 10.1038/s41467-018-02926-5 OPEN A transcriptomic atlas of aged human microglia Marta Olah1,2, Ellis Patrick 3, Alexandra-Chloe Villani2,4, Jishu Xu 2, Charles C. White2, Katie J. Ryan5, Paul Piehowski 6, Alifiya Kapasi6, Parham Nejad2, Maria Cimpean 5, Sarah Connor1,2, Christina J. Yung1, Michael Frangieh5, Allison McHenry5, Wassim Elyaman1,2, Vlad Petyuk 6, Julie A. Schneider7, David A. Bennett7, Philip L. De Jager 1,2 & Elizabeth M. Bradshaw1,2 With a rapidly aging global human population, finding a cure for late onset neurodegenerative diseases has become an urgent enterprise. However, these efforts are hindered by the lack of 1234567890():,; understanding of what constitutes the phenotype of aged human microglia—the cell type that has been strongly implicated by genetic studies in the pathogenesis of age-related neuro- degenerative disease. Here, we establish the set of genes that is preferentially expressed by microglia in the aged human brain. This HuMi_Aged gene set captures a unique phenotype, which we confirm at the protein level. Furthermore, we find this gene set to be enriched in susceptibility genes for Alzheimer’s disease and multiple sclerosis, to be increased with advancing age, and to be reduced by the protective APOEε2 haplotype. APOEε4 has no effect. These findings confirm the existence of an aging-related microglial phenotype in the aged human brain and its involvement in the pathological processes associated with brain aging. 1 Center for Translational & Computational Neuroimmunology, Department of Neurology, Columbia University Medical Center, New York City, NY 10032, USA. 2 Program in Medical and Population Genetics, Broad Institute, Cambridge, MA 02142, USA.