Peptide-Amphiphile Nanofibers: a Versatile Scaffold for the Preparation of Self-Assembling Materials
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Development of Fractalkine-Targeted Nanofibers That Localize to Sites Of
nanomaterials Article Development of Fractalkine-Targeted Nanofibers that Localize to Sites of Arterial Injury Hussein A. Kassam 1, David C. Gillis 1, Brooke R. Dandurand 1 , Mark R. Karver 2 , Nick D. Tsihlis 1 , Samuel I. Stupp 2,3,4,5,6 and Melina R. Kibbe 1,7,* 1 Department of Surgery, Center for Nanotechnology in Drug Delivery, University of North Carolina, Chapel Hill, NC 27599, USA; [email protected] (H.A.K.); [email protected] (D.C.G.); [email protected] (B.R.D.); [email protected] (N.D.T.) 2 Simpson Querrey Institute, Northwestern University, Chicago, IL 60611, USA; [email protected] (M.R.K.); [email protected] (S.I.S.) 3 Department of Chemistry, Northwestern University, Evanston, IL 60208, USA 4 Department of Materials Science and Engineering, Northwestern University, Evanston, IL 60208, USA 5 Department of Biomedical Engineering, Northwestern University, Evanston, IL 60208, USA 6 Department of Medicine, Northwestern University, Chicago, IL 60611, USA 7 Department of Biomedical Engineering, University of North Carolina, Chapel Hill, NC 27599, USA * Correspondence: [email protected]; Tel.: +1-919-445-0369 Received: 30 December 2019; Accepted: 26 February 2020; Published: 28 February 2020 Abstract: Atherosclerosis is the leading cause of death and disability around the world, with current treatments limited by neointimal hyperplasia. Our goal was to synthesize, characterize, and evaluate an injectable, targeted nanomaterial that will specifically bind to the site of arterial injury. Our target protein is fractalkine, a chemokine involved in both neointimal hyperplasia and atherosclerosis. We showed increased fractalkine staining in rat carotid arteries 24 h following arterial injury and in the aorta of low-density lipoprotein receptor knockout (LDLR-/-) mice fed a high-fat diet for 16 weeks. -
Supramolecular Design of Self-Assembling Nanofibers For
Supramolecular design of self-assembling SPECIAL FEATURE nanofibers for cartilage regeneration Ramille N. Shaha,b, Nirav A. Shahc, Marc M. Del Rosario Limd, Caleb Hsieha,b, Gordon Nubere, and Samuel I. Stuppa,b,f,g,1 aInstitute for BioNanotechnology in Medicine, Northwestern University, 303 E. Superior Street 11th floor, Chicago, IL 60611; bDepartment of Materials Science and Engineering, Northwestern University, 2220 Campus Drive, Evanston, IL 60208; cDepartment of Orthopaedic Surgery, Northwestern University, 676 N. Saint Clair, Suite 1350, Chicago, IL 60611; dDepartment of Biomedical Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208; eNorthwestern Orthopaedic Institute, 680 N. Lakeshore Dr., Suite 1028, Chicago, IL 60611; fDepartment of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208; and gDepartment of Medicine, Northwestern University, 251 East Huron Street, Suite 3-150, Chicago, IL 60611 Edited by Robert Langer, Massachusetts Institute of Technology, Cambridge, MA, and approved December 23, 2009 (received for review June 12, 2009) Molecular and supramolecular design of bioactive biomaterials planted through minimally invasive means that localizes and main- could have a significant impact on regenerative medicine. Ideal tains cells and growth factors within the defect site, promotes stem regenerative therapies should be minimally invasive, and thus cell chondrogenic differentiation, and stimulates biosynthesis. the notion of self-assembling biomaterials programmed to trans- In prior work, we developed self-assembling biomaterials form from injectable liquids to solid bioactive structures in tissue based on a broad class of molecules known as peptide amphi- is highly attractive for clinical translation. We report here on a coas- philes (PAs) that self-assemble from aqueous media into supra- sembly system of peptide amphiphile (PA) molecules designed to molecular nanofibers of high aspect ratio. -
(12) United States Patent (10) Patent N0.: US 8,748,569 B2 Stupp Et A]
USOO8748569B2 (12) United States Patent (10) Patent N0.: US 8,748,569 B2 Stupp et a]. (45) Date of Patent: Jun. 10, 2014 (54) PEPTIDE AMPHIPHILES AND METHODS TO Berendsen, A Glimpae of the Holy Grail?, Science, 1998, 282, pp. ELECTROSTATICALLY CONTROL 642-643.* BIOACTIVITY OF THE IKVAV PEPTIDE Voet et al, Biochemistry, John Wiley & Sons Inc., 1995, pp. 235 EPITOPE 241.* Ngo et al, Computational Complexity, Protein Structure Protection, (75) Inventors: Samuel I. Stupp, Chicago, IL (US); and the Levinthal Paradox, 1994, pp. 491-494.* Bradley et al., Limits of Cooperativity in a Structurally Modular Joshua E. Goldberger, Columbus, OH Protein: Response of the Notch Ankyrin Domain to Analogous (US); Eric J. Berns, Chicago, IL (US) Alanine Substitutions in Each Repeat, J. M01. BIoL (2002) 324, 373-386.* (73) Assignee: Northwestern University, Evanston, IL Tysseling et al., “Self-assembling peptide amphiphile promotes plas (Us) ticity of serotonergic ?bers following spinal cord injury,” J Neurosci Res, 2010, 88: 3161-3170. ( * ) Notice: Subject to any disclaimer, the term of this Tysseling-Mattiace et al., “Self-assembling nano?bers inhibit glial patent is extended or adjusted under 35 scar formation and promote axon elongation after spinal cord injury,” U.S.C. 154(b) by 0 days. JNeurosci, 2008, 28: 3814-3823. Wheeler et al., “Microcontact printing for precise control of nerve (21) Appl.No.: 13/442,210 cell growth in culture,” J Biomech Eng, 1999, 121: 73-78. Yamada et al., “Ile-Lys-Val-Ala-Val (IKVAV)-containing laminin (22) Filed: Apr. 9, 2012 alphal chain peptides form amyloid-like ?brils,” FEBS Lett, 2002, 530: 48-52. -
Partition Coefficients in Mixed Surfactant Systems
Partition coefficients in mixed surfactant systems Application of multicomponent surfactant solutions in separation processes Vom Promotionsausschuss der Technischen Universität Hamburg-Harburg zur Erlangung des akademischen Grades Doktor-Ingenieur genehmigte Dissertation von Tanja Mehling aus Lohr am Main 2013 Gutachter 1. Gutachterin: Prof. Dr.-Ing. Irina Smirnova 2. Gutachterin: Prof. Dr. Gabriele Sadowski Prüfungsausschussvorsitzender Prof. Dr. Raimund Horn Tag der mündlichen Prüfung 20. Dezember 2013 ISBN 978-3-86247-433-2 URN urn:nbn:de:gbv:830-tubdok-12592 Danksagung Diese Arbeit entstand im Rahmen meiner Tätigkeit als wissenschaftliche Mitarbeiterin am Institut für Thermische Verfahrenstechnik an der TU Hamburg-Harburg. Diese Zeit wird mir immer in guter Erinnerung bleiben. Deshalb möchte ich ganz besonders Frau Professor Dr. Irina Smirnova für die unermüdliche Unterstützung danken. Vielen Dank für das entgegengebrachte Vertrauen, die stets offene Tür, die gute Atmosphäre und die angenehme Zusammenarbeit in Erlangen und in Hamburg. Frau Professor Dr. Gabriele Sadowski danke ich für das Interesse an der Arbeit und die Begutachtung der Dissertation, Herrn Professor Horn für die freundliche Übernahme des Prüfungsvorsitzes. Weiterhin geht mein Dank an das Nestlé Research Center, Lausanne, im Besonderen an Herrn Dr. Ulrich Bobe für die ausgezeichnete Zusammenarbeit und der Bereitstellung von LPC. Den Studenten, die im Rahmen ihrer Abschlussarbeit einen wertvollen Beitrag zu dieser Arbeit geleistet haben, möchte ich herzlichst danken. Für den außergewöhnlichen Einsatz und die angenehme Zusammenarbeit bedanke ich mich besonders bei Linda Kloß, Annette Zewuhn, Dierk Claus, Pierre Bräuer, Heike Mushardt, Zaineb Doggaz und Vanya Omaynikova. Für die freundliche Arbeitsatmosphäre, erfrischenden Kaffeepausen und hilfreichen Gespräche am Institut danke ich meinen Kollegen Carlos, Carsten, Christian, Mohammad, Krishan, Pavel, Raman, René und Sucre. -
2009: Self-Assembling Peptide Amphiphile-Based Nanofiber Gel for Bioresponsive Cisplatin Delivery
Self-assembling Peptide Amphiphile-based Nanofiber Gel for Bioresponsive Cisplatin Delivery Seongbong Jo1, Jin-Ki Kim1, Joel Anderson2, Ho-Wook Jun2, Michael A. Repka1 1 Department of Pharmaceutics, School of Pharmacy, The University of Mississippi, 2 Department of Biomedical Engineering, University of Alabama at Birmingham Statement of Purpose: Peptide amphiphiles (PAs) 8.5-fold greater than that with MR = 1, respectively. TEM composed of a hydrophilic biomimetic peptide sequence images exhibited that the CDDP/PA gels were composed and a hydrophobic alkyl chain have been extensively of the nanofibers of 8-10 nm in diameter and several studied as biomaterials which mimic extracellular micrometers in length. In addition, physical crosslinking matrices [1-3]. Although in situ formed PA gels have of the self-assembled nanofibers was pronounced in the been intensively examined for cellular engineering, their PA gel (Fig. 1A). applications for drug delivery have been limited thus far. The aim of this study is to develop a bioresponsive cisplatin (CDDP) delivery system with a biomimetic peptide amphiphile (PA). The self-assembling PA comprised of RGDS, MMP-2-sensitive GTAGLIGQ and a fatty acid has been investigated for spontaneous gel formation via complexation with CDDP. MMP-sensitive CDDP release from the PA gel has been examined to simulate tumor-responsive CDDP release in vitro. Methods: A peptide consisting of RGDS and MMP- sensitive GTAGLIGQ was synthesized by standard Fmoc- (A) (B) chemistry. PA was successfully synthesized by a coupling Figure 1. TEM images of nanofiber-networked CDDP-PA gels reaction to acylate the N-terminus of the peptide with with MR = 1.5 at preparation (A) and after enzymatic palmitic acid. -
Simple, Self-Assembling, Single-Site Model Amphiphile for Water-Free Simulation of Lyotropic Phases
Simple, self-assembling, single-site model amphiphile for water-free simulation of lyotropic phases Somajit Dey and Jayashree Saha Department of Physics, University of Calcutta, 92, A.P.C Road, Kolkata-700009, India, Email: [email protected] Computationally, low-resolution coarse-grained models provide the most viable means for simulating the large length and time scales associated with mesoscopic phenomena. Moreover, since lyotropic phases in solution may contain high solvent to amphiphile ratio, implicit solvent models are appropriate for many purposes. By modifying the well-known Gay-Berne potential with an imposed uni-directionality and a longer range, we have come to a simple single-site model amphiphile that can rapidly self-assemble to give diverse lyotropic phases without the explicit incorporation of solvent particles. The model represents a tuneable packing parameter that manifests in the spontaneous curvature of amphiphile aggregates. Apart from large scale simulations (e.g. the study of self-assembly, amphiphile mixing, domain formation etc.) this novel, non-specific model may be useful for suggestive pilot projects with modest computational resources. No such self-assembling, single-site amphiphile model has been reported previously in the literature to the best of our knowledge. 1 Introduction by allowing larger time steps [10]. It also reduces the number of Surfactants or “surface active agents” are so called because of their site-site interactions for a given number of macromolecules ability to reduce the surface tension of liquids. Macromolecules implying a larger length scale. However, the small size of CG water that act as surfactants in water generally consist of a hydrophilic molecules compared to the amphiphiles, combined with their (water-loving) head linked to one or more hydrophobic (water- number, limit the scales of a simulation. -
The Osteogenic Differentiation Effect of the FN Type 10-Peptide Amphiphile on PCL Fiber
International Journal of Molecular Sciences Article The Osteogenic Differentiation Effect of the FN Type 10-Peptide Amphiphile on PCL Fiber Ye-Rang Yun 1, Hae-Won Kim 2,3,4,* and Jun-Hyeog Jang 5,* ID 1 Industrial Technology Research Group, Research and Development Division, World Institute of Kimchi, Nam-Gu, Gwangju 61755, Korea; [email protected] 2 Institute of Tissue Regeneration Engineering (ITREN), Dankook University, Cheonan 330-714, Korea 3 Department of Nanobiomedical Science & BK21 PLUS NBM Global Research Center for Regenerative Medicine, Dankook University, Cheonan 330-714, Korea 4 Department of Biomaterials Science, School of Dentistry, Dankook University, Cheonan 330-714, Korea 5 Department of Biochemistry, Inha University School of Medicine, Incheon 22212, Korea * Correspondence: [email protected] (H.-W.K.); [email protected] (J.-H.J.); Tel.: +82-41-550-3081 (H.-W.K.); +82-32-890-0930 (J.-H.J.); Fax: +82-41-550-3085 (H.-W.K.); +82-32-882-1877 (J.-H.J.) Received: 1 November 2017; Accepted: 3 January 2018; Published: 4 January 2018 Abstract: The fibronectin type 10-peptide amphiphile (FNIII10-PA) was previously genetically engineered and showed osteogenic differentiation activity on rat bone marrow stem cells (rBMSCs). In this study, we investigated whether FNIII10-PA demonstrated cellular activity on polycaprolactone (PCL) fibers. FNIII10-PA significantly increased protein production and cell adhesion activity on PCL fibers in a dose-dependent manner. In cell proliferation results, there was no effect on cell proliferation activity by FNIII10-PA; however, FNIII10-PA induced the osteogenic differentiation of MC3T3-E1 cells via upregulation of bone sialoprotein (BSP), collagen type I (Col I), osteocalcin (OC), osteopontin (OPN), and runt-related transcription factor 2 (Runx2) mitochondrial RNA (mRNA) levels; it did not increase the alkaline phosphatase (ALP) mRNA level. -
Self-Assembling Peptides and Their Application in the Treatment of Diseases
International Journal of Molecular Sciences Review Self-Assembling Peptides and Their Application in the Treatment of Diseases Sungeun Lee 1, Trang H.T. Trinh 1, Miryeong Yoo 1, Junwu Shin 1, Hakmin Lee 1, Jaehyeon Kim 1, Euimin Hwang 2, Yong-beom Lim 2 and Chongsuk Ryou 1,* 1 Department of Pharmacy and Institute of Pharmaceutical Science and Technology, Hanyang University, Gyeonggi-do 15588, Korea; [email protected] (S.L.); [email protected] (T.H.T.T.); [email protected] (M.Y.); [email protected] (J.S.); [email protected] (H.L.); [email protected] (J.K.) 2 Department of Materials Science and Engineering, Yonsei University, Seoul 03722, Korea; [email protected] (E.H.); [email protected] (Y.-b.L.) * Correspondence: [email protected]; Tel.: +82-31-400-5811; Fax: +82-31-400-5958 Received: 30 September 2019; Accepted: 20 November 2019; Published: 21 November 2019 Abstract: Self-assembling peptides are biomedical materials with unique structures that are formed in response to various environmental conditions. Governed by their physicochemical characteristics, the peptides can form a variety of structures with greater reactivity than conventional non-biological materials. The structural divergence of self-assembling peptides allows for various functional possibilities; when assembled, they can be used as scaffolds for cell and tissue regeneration, and vehicles for drug delivery, conferring controlled release, stability, and targeting, and avoiding side effects of drugs. These peptides can also be used as drugs themselves. In this review, we describe the basic structure and characteristics of self-assembling peptides and the various factors that affect the formation of peptide-based structures. -
Design of 18 Nm Doxorubicin-Loaded 3-Helix Micelles: Cellular Uptake and Cytotoxicity in Patient-Derived GBM6 Cells
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.04.072892; this version posted May 5, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Design of 18 nm Doxorubicin-loaded 3-helix Micelles: Cellular Uptake and Cytotoxicity in Patient-derived GBM6 Cells Benson T. Jung1, Katherine Jung2, Marc Lim3, Michael Li2, Raquel Santos4, Tomoko Ozawa4, Ting Xu*1, 2, 5 1Department of Materials Science and Engineering, University of California, Berkeley, CA, United States 2Department of Chemistry, University of California, Berkeley, CA, United States 3UCB-UCSF Graduate Program in Bioengineering, University of California, Berkeley, CA, United States 4Department of Neurological Surgery, University of California, San Francisco, CA, United States 5Material Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, United States * Mailing address: 381 Hearst Memorial Mining Building, UC Berkeley, Berkeley, CA 94720. Email: [email protected] Keywords: peptide amphiphiles, cellular uptake, patient-derived xenograft, glioblastoma, nano- bio interface, PEGylation 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.05.04.072892; this version posted May 5, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract: The fate of nanocarrier materials at the cellular level constitutes a critical checkpoint in the development of effective nanomedicines, determining whether tissue level accumulation results in therapeutic benefit. -
Review Article Amphiphiles Self-Assembly: Basic Concepts and Future Perspectives of Supramolecular Approaches
Hindawi Publishing Corporation Advances in Condensed Matter Physics Volume 2015, Article ID 151683, 22 pages http://dx.doi.org/10.1155/2015/151683 Review Article Amphiphiles Self-Assembly: Basic Concepts and Future Perspectives of Supramolecular Approaches Domenico Lombardo,1 Mikhail A. Kiselev,2 Salvatore Magazù,3 and Pietro Calandra4 1 Consiglio Nazionale delle Ricerche (CNR), Istituto per i Processi Chimico-Fisici (IPCF), Viale F.S. D’Alcontres, No. 37, 98158 Messina, Italy 2Frank Laboratory of Neutron Physics, Joint Institute for Nuclear Research, Ulica Joliot-Curie 6, Dubna, Moscow 141980, Russia 3Dipartimento di Fisica e Scienze della Terra, Universita` di Messina, Viale F.S. D’Alcontres, No. 31, 98158 Messina, Italy 4Consiglio Nazionale delle Ricerche (CNR), Istituto per lo Studio dei Materiali Nanostrutturati (ISMN), Via Salaria km 29.300, Monterotondo Stazione, 00015 Roma, Italy Correspondence should be addressed to Domenico Lombardo; [email protected] Received 5 May 2015; Accepted 27 September 2015 Academic Editor: Ram N. P. Choudhary Copyright © 2015 Domenico Lombardo et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Amphiphiles are synthetic or natural molecules with the ability to self-assemble into a wide variety of structures including micelles, vesicles, nanotubes, nanofibers, and lamellae. Self-assembly processes of amphiphiles have been widely used to mimic biological systems, such as assembly of lipids and proteins, while their integrated actions allow the performance of highly specific cellular functions which has paved a way for bottom-up bionanotechnology. -
Bioinspired Kokkoli Paper
Engineering Biomimetic Peptides for Targeted Drug Delivery EFROSINI KOKKOLI University of Minnesota, Minneapolis Targeted drug delivery, the ability to target a drug to a specific site of disease, is the leading frontier in the pursuit of better strategies that will allow us to selectively treat diseases with minimal side effects, and peptide functionalized nanovectors are a promising class of targeted delivery vehicles. Biomimetic peptide targeting ligands, peptides that mimic cell binding domains of proteins, can be readily designed to bind a target (for example, an adhesion receptor on the surface of a cell) selectively with high affinity and specificity, and more importantly are molecules accessible by chemical synthesis and relatively compact compared to antibodies and full proteins. PEPTIDE FUNCTIONALIZED LIPOSOMES Liposomes are the most extensively studied drug transport systems to date, with a number of non-targeted liposome delivery systems already FDA approved and being used in a clinical setting. Liposomes can range from approximately 50 nm to microns in diameter, although diameters 100-200 nm are often desirable for drug delivery applications. “Stealth” liposomes, also often referred to as sterically stabilized liposomes, have short polyethylene glycol (PEG) polymer strands attached to a fraction of the hydrophilic lipid headgroups. These PEG chains form a polymer brush on the surface of the liposome that, through steric repulsion, resist protein adhesion and therefore clearance by the reticuloendothelial system (RES). Today, one ongoing area of effort in liposome drug delivery research involves conjugating ligands, such as peptides, onto “stealth” 1 liposomes to confer active as well as passive targeting to these drug carriers. -
Amphiphile Regulation of Ion Channel Function by Changes in the Bilayer Spring Constant
Amphiphile regulation of ion channel function by changes in the bilayer spring constant Jens A. Lundbæka,b,1, Roger E. Koeppe IIc, and Olaf S. Andersena aDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, NY 10065; bQuantum Protein Center, Department of Physics, Technical University of Denmark, Kongens Lyngby, DK-2800, Denmark; and cDepartment of Chemistry and Biochemistry, University of Arkansas, Fayetteville, AR 72701 Edited* by Christopher Miller, Brandeis University, Waltham, MA, and approved July 16, 2010 (received for review June 1, 2010) Many drugs are amphiphiles that, in addition to binding to a A B particular target protein, adsorb to cell membrane lipid bilayers and alter intrinsic bilayer physical properties (e.g., bilayer thick- ness, monolayer curvature, and elastic moduli). Such changes can modulate membrane protein function by altering the energetic F ΔG dis cost ( bilayer) of bilayer deformations associated with protein conformational changes that involve the protein-bilayer interface. d l d l But amphiphiles have complex effects on the physical properties of 0 0 ΔG lipid bilayers, meaning that the net change in bilayer cannot be F predicted from measurements of isolated changes in such proper- dis ties. Thus, the bilayer contribution to the promiscuous regulation Fig. 1. Hydrophobic coupling between a bilayer-embedded protein and its of membrane proteins by drugs and other amphiphiles remains host lipid bilayer. (A) A protein conformational change causes a local bilayer unknown. To overcome this problem, we use gramicidin A (gA) deformation. (B) Formation of a gA channel involves local bilayer thinning. channels as molecular force probes to measure the net effect of Modified from ref.