Towards the Total Synthesis of 7-Epi-Clusianone
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Diversity-Oriented Combinatorial Biosynthesis of Benzenediol Lactone Scaffolds by Subunit Shuffling of Fungal Polyketide Synthases
Diversity-oriented combinatorial biosynthesis of benzenediol lactone scaffolds by subunit shuffling of fungal polyketide synthases Yuquan Xua,b,1, Tong Zhouc,1, Shuwei Zhangc, Patricia Espinosa-Artilesb, Luoyi Wangc, Wei Zhanga, Min Lina, A. A. Leslie Gunatilakab,d, Jixun Zhanc,2, and István Molnárb,d,2 aBiotechnology Research Institute, The Chinese Academy of Agricultural Sciences, Beijing 100081, P. R. China; bNatural Products Center, School of Natural Resources and the Environment, University of Arizona, Tucson, AZ 85706; cDepartment of Biological Engineering, Utah State University, Logan, UT 84322; and dBio5 Institute, University of Arizona, Tucson, AZ 85721 Edited by Jerrold Meinwald, Cornell University, Ithaca, NY, and approved June 23, 2014 (received for review April 16, 2014) Combinatorial biosynthesis aspires to exploit the promiscuity of biosynthesis inhibitory activities in animals. 10,11-dehydrocurvularin microbial anabolic pathways to engineer the synthesis of new (7;Fig.1)isaDALwitha12-memberedring(DAL12)that chemical entities. Fungal benzenediol lactone (BDL) polyketides modulates the heat shock response and the immune system (8, 9). are important pharmacophores with wide-ranging bioactivities, BDL scaffolds are biosynthesized by pairs of collaborating, including heat shock response and immune system modulatory sequentially acting iterative polyketide synthases (iPKSs) (3) – effects. Their biosynthesis on a pair of sequentially acting iterative forming quasi-modular BDL synthases (BDLSs) (Fig. 1) (11 14). polyketide synthases (iPKSs) offers a test case for the modulariza- Each of the BDLS subunits catalyze recursive, decarboxylative tion of secondary metabolic pathways into “build–couple–pair” Claisen condensations of malonyl-CoA using a single core set of ketoacyl synthase (KS), acyl transferase (AT), and acyl carrier combinatorial synthetic schemes. -
Experiment 19 — Aldol Condensation
Chem 22 Spring 2010 Experiment 19 — Aldol Condensation _____________________________________________________________________________ Pre-lab preparation. (1) Write the mechanism of the base-catalyzed aldol condensation of acetone and a generalized aromatic aldehyde, Ar–CH=O to give the α,β-unsaturated product (i.e. the reaction at the top of the next page, but with a 1:1 ratio of ketone and aldehyde). Remember that dehydration in this case occurs under basic conditions, so it can't start with protonation of the hydroxyl group. Nor can it go via an E2 pathway. (2) Draw the structures of all the possible aldehyde and ketone reactants (not the 25 possible condensation products!). (3) The new CC double bonds of the condensation products are E rather than Z, as shown in the acetone example. Why? (4) What's the purpose of rinsing the crude product with dilute acetic acid, followed by ethanol? (5) What is the procedure for carrying out a single-solvent recrystallization? Write this out in detail. The aldol condensation has historically been one of the favorite tools in the synthetic organic chemist's repertoire because of its versatility in forming new CC bonds. Since its discovery in the 1870s the aldol condensation has been use extensively in the synthesis of natural products and other complex molecules. In a typical base-catalyzed aldol condensation an enolate ion attacks the carbonyl group of an aldehyde or ketone. This carbonyl addition produces a β-hydroxy carbonyl compound. In many cases the initially formed condensation product undergoes an "E1cB" dehydration to produce an α,β-unsaturated carbonyl compound as the final product. -
Last Decade of Unconventional Methodologies for the Synthesis Of
Review molecules Last Decade of Unconventional Methodologies for theReview Synthesis of Substituted Benzofurans Last Decade of Unconventional Methodologies for the Lucia Chiummiento *, Rosarita D’Orsi, Maria Funicello and Paolo Lupattelli Synthesis of Substituted Benzofurans Department of Science, Via dell’Ateneo Lucano, 10, 85100 Potenza, Italy; [email protected] (R.D.); [email protected] (M.F.); [email protected] (P.L.) Lucia Chiummiento * , Rosarita D’Orsi, Maria Funicello and Paolo Lupattelli * Correspondence: [email protected] Department of Science, Via dell’Ateneo Lucano, 10, 85100 Potenza, Italy; [email protected] (R.D.); Academic Editor: Gianfranco Favi [email protected] (M.F.); [email protected] (P.L.) Received:* Correspondence: 22 April 2020; [email protected] Accepted: 13 May 2020; Published: 16 May 2020 Abstract:Academic This Editor: review Gianfranco describes Favi the progress of the last decade on the synthesis of substituted Received: 22 April 2020; Accepted: 13 May 2020; Published: 16 May 2020 benzofurans, which are useful scaffolds for the synthesis of numerous natural products and pharmaceuticals.Abstract: This In review particular, describes new the intramolecular progress of the and last decadeintermolecular on the synthesis C–C and/or of substituted C–O bond- formingbenzofurans, processes, which with aretransition-metal useful scaffolds catalysi for thes or synthesis metal-free of numerous are summarized. natural products(1) Introduction. and (2) Ringpharmaceuticals. generation via In particular, intramolecular new intramolecular cyclization. and (2.1) intermolecular C7a–O bond C–C formation: and/or C–O (route bond-forming a). (2.2) O– C2 bondprocesses, formation: with transition-metal (route b). -
Aldol Condensation- Aldehyde (Or Ketone) Enolate Condenses with Aldehyde (Or Ketone)
Chem 232 Summary of Alpha Substitutions page 1 Aldol Condensation- aldehyde (or ketone) enolate condenses with aldehyde (or ketone): O CH O O H 3 H CH 3 CH3 C C C C CH C C CH2 CH2 H -H O H H O OH 2 H nucleophile electrophile -hydroxy aldehyde -unsaturated aldehyde The nucleophile can be a ketone enolate or aldehyde enolate and the electrophile (shaded) can be an aldehyde or ketone. Crossed Aldol- Condensation between two different carbonyls. The component without hydrogens is the electrophile: O O O OH O C CH C C CH CH3 C H CH -H2O CH 2 CH3 H 3 ketone enolate no -hydrogens -unsaturated ketone Aldol Cyclizations- A dicarbonyl produces an enolate and carbonyl in the same molecule: enolate from a O OH 1,5-diketone CH OH 3 CH3 O O -H2O O CH2 CH3 CH3 CH2 O Claisen Condensation- Similar to Aldol condensation except the nucleophile is an ester enolate; O O O O O O + EtO C CH C OEt EtO C CH2 C EtO C CH2 CH3 C OEt 2 ketoester CH3 CH3 Dieckmann Cyclization- Internal Claisen condensation similar to Aldol cyclization. A 1,6 diester gives a 5-membered ring and a 1,7 diester gives a 6-membered ring: O OEt O OEt cyclic ketoester C C OEt O O Crossed Claisen- Similar to crossed Aldol- Electrophile has nohydrogens: O O O O C C EtO EtO C CH2 EtO C CH2 ketoester Variations on Crossed Claisen- ketone enolate and ester condensation. Esters, carbonates, formates and oxalates are common electrophiles: O O O O O O O O H C OEt H EtO C OEt OEt ethyl formate -ketoaldehyde diethyl carbonate -ketoester O O O O O OEt diketoester EtO C C OEt O diethyl oxalate -
Bond Distances and Bond Orders in Binuclear Metal Complexes of the First Row Transition Metals Titanium Through Zinc
Metal-Metal (MM) Bond Distances and Bond Orders in Binuclear Metal Complexes of the First Row Transition Metals Titanium Through Zinc Richard H. Duncan Lyngdoh*,a, Henry F. Schaefer III*,b and R. Bruce King*,b a Department of Chemistry, North-Eastern Hill University, Shillong 793022, India B Centre for Computational Quantum Chemistry, University of Georgia, Athens GA 30602 ABSTRACT: This survey of metal-metal (MM) bond distances in binuclear complexes of the first row 3d-block elements reviews experimental and computational research on a wide range of such systems. The metals surveyed are titanium, vanadium, chromium, manganese, iron, cobalt, nickel, copper, and zinc, representing the only comprehensive presentation of such results to date. Factors impacting MM bond lengths that are discussed here include (a) n+ the formal MM bond order, (b) size of the metal ion present in the bimetallic core (M2) , (c) the metal oxidation state, (d) effects of ligand basicity, coordination mode and number, and (e) steric effects of bulky ligands. Correlations between experimental and computational findings are examined wherever possible, often yielding good agreement for MM bond lengths. The formal bond order provides a key basis for assessing experimental and computationally derived MM bond lengths. The effects of change in the metal upon MM bond length ranges in binuclear complexes suggest trends for single, double, triple, and quadruple MM bonds which are related to the available information on metal atomic radii. It emerges that while specific factors for a limited range of complexes are found to have their expected impact in many cases, the assessment of the net effect of these factors is challenging. -
Enantioselective Synthesis of (-)-Vallesine: Late- Stage C17-Oxidation Via Complex Indole Boronation
Enantioselective synthesis of (-)-vallesine: late- stage C17-oxidation via complex indole boronation The MIT Faculty has made this article openly available. Please share how this access benefits you. Your story matters. Citation Antropow, Alyssa H., et al., "Enantioselective synthesis of (-)-vallesine: late-stage C17-oxidation via complex indole boronation." Organic Letters 20, 12 (2018): p. 3647-50 doi 10.1021/ acs.orglett.8b01428 ©2018 Author(s) As Published 10.1021/acs.orglett.8b01428 Publisher American Chemical Society (ACS) Version Author's final manuscript Citable link https://hdl.handle.net/1721.1/125882 Terms of Use Article is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use. HHS Public Access Author manuscript Author ManuscriptAuthor Manuscript Author Org Lett Manuscript Author . Author manuscript; Manuscript Author available in PMC 2019 June 15. Published in final edited form as: Org Lett. 2018 June 15; 20(12): 3647–3650. doi:10.1021/acs.orglett.8b01428. Enantioselective Synthesis of (−)-Vallesine: Late-stage C17- Oxidation via Complex Indole Boronation Alyssa H. Antropow, Nicholas R. Garcia, Kolby L. White, and Mohammad Movassaghi* Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA Abstract The first enantioselective total synthesis of (−)-vallesine via a strategy that features a late-stage regioselective C17-oxidation, followed by a highly stereoselective transannular cyclization is reported. The versatility of this approach is highlighted by divergent synthesis of the archetypal alkaloid of this family, (+)-aspidospermidine, and an A-ring oxygenated derivative (+)- deacetylaspidospermine, the precursor to (−)-vallesine, from a common intermediate. -
Aldol Condensation
Chemistry 212 Laboratory Dibenzalacetone via Crossed Aldol Condensation Prelab: Calculate the amounts of all chemicals needed in measurable amounts (i.e. grams or milliliters rather than moles.) Introduction: Aldol condensations are important in organic synthesis, providing a good way to form carbon–carbon bonds. The "aldol" (aldehyde + alcohol) product is a structural unit found in many naturally occurring molecules and pharmaceuticals, and is therefore important. In an Aldol condensation an enolate ion reacts with a carbonyl compound to form a β- hydroxyaldehyde or β-hydroxyketone, followed by dehydration to give a conjugated enone. The general equation is shown in Figure 1. O O O R" B: H R R'" R "R R'" loss of H2O H R' R' Figure 1. The equation for the Aldol Condensation. The reaction involves the nucleophilic addition of an enolate to an aldehyde to form a β-hydroxy carbonyl. The β-hydroxy carbonyl is readily dehydrated under mild conditions. The aldol reaction occurs under both acidic and basic conditions as seen in Figure 2. ENOL pathway (reacts in H O protonated OH form) O O catalytic H+ O O H H R' H2O lost R' R R R' R R H aldol addition product aldol condensation product ENOLATE pathway O O M O M O base O H R' R R' R R enolate H Figure 2. The Aldol reaction and subsequent dehydration under acidic and basic conditions. The reaction we will be doing this week involves the reaction between benzaldehyde and acetone to do a double Aldol Condensation. The overall equation is shown in Figure 3. -
Synthesis of Fused and Bridged Ring Systems James Nicolas Ong Sy Iowa State University
Iowa State University Capstones, Theses and Retrospective Theses and Dissertations Dissertations 1988 Synthesis of fused and bridged ring systems James Nicolas Ong Sy Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/rtd Part of the Organic Chemistry Commons Recommended Citation Sy, James Nicolas Ong, "Synthesis of fused and bridged ring systems " (1988). Retrospective Theses and Dissertations. 9735. https://lib.dr.iastate.edu/rtd/9735 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Retrospective Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. INFORMATION TO USERS The most advanced technology has been used to photo graph and reproduce this manuscript from the microfilm master. UMI films the original text directly from the copy submitted. Thus, some dissertation copies are in typewriter face, while others may be from a computer printer. In the unlikely event that the author did not send UMl a complete manuscript and there are missing pages, these will be noted. Also, if unauthorized copyrighted material had to be removed, a note will indicate the deletion. Oversize materials (e.g., maps, drawings, charts) are re produced by sectioning the original, beginning at the upper left-hand comer and continuing from left to right in equal sections with small overlaps. Each oversize page is available as one exposure on a standard 35 mm slide or as a 17" x 23" black and white photographic print for an additional charge. -
Hop Compounds: Extraction Techniques, Chemical Analyses, Antioxidative, Antimicrobial, and Anticarcinogenic Effects
nutrients Review Hop Compounds: Extraction Techniques, Chemical Analyses, Antioxidative, Antimicrobial, and Anticarcinogenic Effects Maša Knez Hrnˇciˇc 1,†, Eva Španinger 2,†, Iztok Jože Košir 3, Željko Knez 1 and Urban Bren 2,* 1 Laboratory of Separation Processes and Product Design, Faculty of Chemistry and Chemical Engineering, University of Maribor, Smetanova ulica 17, SI-2000 Maribor, Slovenia; [email protected] (M.K.H.); [email protected] (Ž.K.) 2 Laboratory of Physical Chemistry and Chemical Thermodynamics, Faculty of Chemistry and Chemical Engineering, University of Maribor, Smetanova ulica 17, SI-2000 Maribor, Slovenia; [email protected] 3 Slovenian Institute of Hop Research and Brewing, Cesta Žalskega Tabora 2, SI-3310 Žalec, Slovenia; [email protected] * Correspondence: [email protected]; Tel.: +386-2-2294-421 † These authors contributed equally to this work. Received: 7 December 2018; Accepted: 18 January 2019; Published: 24 January 2019 Abstract: Hop plants comprise a variety of natural compounds greatly differing in their structure and properties. A wide range of methods have been developed for their isolation and chemical analysis, as well as for determining their antioxidative, antimicrobial, and antigenotoxic potentials. This contribution provides an overview of extraction and fractionation techniques of the most important hop compounds known for their health-promoting features. Although hops remain the principal ingredient for providing the taste, stability, and antimicrobial protection of beer, they have found applications in the pharmaceutical and other food industries as well. This review focuses on numerous health-promoting effects of hops raging from antioxidative, sedative, and anti-inflammatory potentials, over anticarcinogenic features to estrogenic activity. -
Chalcone Synthase Homologues from Humulus Lupulus: Some Enzymatic Properties and Expression
BIOLOGIA PLANTARUM 50 (1): 48-54, 2006 Chalcone synthase homologues from Humulus lupulus: some enzymatic properties and expression P. NOVÁK*,**, K. KROFTA*** and J. MATOUŠEK*,1 Institute of Plant Molecular Biology AS CR, Branišovská 31, CZ-37005 České Budějovice, Czech Republic* South Bohemian University, Biological Faculty, Branišovská 31, CZ-37005 České Budějovice, Czech Republic** Hop Research Institute, Kadaňská 2525, CZ-43846, Žatec, Czech Republic*** Abstract The enzymatic properties of four chalcone synthase homologues CHS_H1, VPS, CHS 2 and CHS 4 from Humulus lupulus L. were investigated after heterologous expression in Escherichia coli. It was found that both VPS and CHS_H1 can utilize isovaleryl-CoA and isobutyryl-CoA as substrates producing compounds with positions in thin layer chromatography characteristic for phloroisovalerophenone and phloroisobutyrophenone. These reactions are accompanied by the formation of associated byproducts. The formation of naringenin chalcone can be catalyzed primarily by CHS_H1. Comparatively the ability of VPS to perform chalcone synthase reaction is very limited. Since only CHS_H1 has true chalcone synthase activity, this enzyme can be considered a key enzyme in prenylflavonoid biosynthesis. Both CHS 2 and CHS 4 utilize isovaleryl-CoA and isobutyryl-CoA as substrates, but the reactions were prematurely terminated. In comparison with VPS and CHS_H1, the optimum pH of CHS 2 was shifted to lower value. High expression of chalcone synthase-like genes were found in maturating hop cones of cultivars with high bitter acid content (Agnus, Magnum, Target) by Northern and Western blotting using probes specific for vps, chs_H1, chs 4 and polyspecific serum risen against recombinant protein CHS4, respectively. It was also found that these cultivars maintained expression of CHS homologues for a longer period of time during cone development in contrast to time- limited expression of CHS homologues in cultivars with low bitter acids content. -
S.T.E.T.Women's College, Mannargudi Semester Iii Ii M
S.T.E.T.WOMEN’S COLLEGE, MANNARGUDI SEMESTER III II M.Sc., CHEMISTRY ORGANIC CHEMISTRY - II – P16CH31 UNIT I Aliphatic nucleophilic substitution – mechanisms – SN1, SN2, SNi – ion-pair in SN1 mechanisms – neighbouring group participation, non-classical carbocations – substitutions at allylic and vinylic carbons. Reactivity – effect of structure, nucleophile, leaving group and stereochemical factors – correlation of structure with reactivity – solvent effects – rearrangements involving carbocations – Wagner-Meerwein and dienone-phenol rearrangements. Aromatic nucleophilic substitutions – SN1, SNAr, Benzyne mechanism – reactivity orientation – Ullmann, Sandmeyer and Chichibabin reaction – rearrangements involving nucleophilic substitution – Stevens – Sommelet Hauser and von-Richter rearrangements. NUCLEOPHILIC SUBSTITUTION Mechanism of Aliphatic Nucleophilic Substitution. Aliphatic nucleophilic substitution clearly involves the donation of a lone pair from the nucleophile to the tetrahedral, electrophilic carbon bonded to a halogen. For that reason, it attracts to nucleophile In organic chemistry and inorganic chemistry, nucleophilic substitution is a fundamental class of reactions in which a leaving group(nucleophile) is replaced by an electron rich compound(nucleophile). The whole molecular entity of which the electrophile and the leaving group are part is usually called the substrate. The nucleophile essentially attempts to replace the leaving group as the primary substituent in the reaction itself, as a part of another molecule. The most general form of the reaction may be given as the following: Nuc: + R-LG → R-Nuc + LG: The electron pair (:) from the nucleophile(Nuc) attacks the substrate (R-LG) forming a new 1 bond, while the leaving group (LG) departs with an electron pair. The principal product in this case is R-Nuc. The nucleophile may be electrically neutral or negatively charged, whereas the substrate is typically neutral or positively charged. -
The Development and SAR of Selective Sigma-2 Receptor Ligands for the Diagnosis of Cancer Mark Ashford University of Wollongong
University of Wollongong Research Online University of Wollongong Thesis Collection University of Wollongong Thesis Collections 2010 The development and SAR of selective sigma-2 receptor ligands for the diagnosis of cancer Mark Ashford University of Wollongong Recommended Citation Ashford, Mark, The development and SAR of selective sigma-2 receptor ligands for the diagnosis of cancer, Doctor of Philosophy thesis, School of Chemistry, University of Wollongong, 2010. http://ro.uow.edu.au/theses/3634 Research Online is the open access institutional repository for the University of Wollongong. For further information contact the UOW Library: [email protected] The Development and SAR of Selective Sigma-2 Receptor Ligands for the Diagnosis of Cancer Mark E. Ashford B. Med. Chem. Hons (Adv) A thesis submitted in fulfilment of the requirements for the award of the degree Doctor of Philosophy From University of Wollongong School of Chemistry August 2010 Declaration I, Mark Edward Ashford, declare that this thesis, submitted in fulfilment of the requirements for the award of Doctor of Philosophy, in the School of Chemistry, Faculty of Science, University of Wollongong, is wholly my own work unless otherwise referenced or acknowledged. The document has not been submitted for qualifications at any other academic institution. Mark E. Ashford 2010 Mark Ashford, PhD Thesis 2010 ii Table of Contents Declaration.......................................................................................................................ii List of Figures.................................................................................................................vi