Lecture 8: PATHS, CYCLES and CONNECTEDNESS 1 Paths
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Networkx: Network Analysis with Python
NetworkX: Network Analysis with Python Salvatore Scellato Full tutorial presented at the XXX SunBelt Conference “NetworkX introduction: Hacking social networks using the Python programming language” by Aric Hagberg & Drew Conway Outline 1. Introduction to NetworkX 2. Getting started with Python and NetworkX 3. Basic network analysis 4. Writing your own code 5. You are ready for your project! 1. Introduction to NetworkX. Introduction to NetworkX - network analysis Vast amounts of network data are being generated and collected • Sociology: web pages, mobile phones, social networks • Technology: Internet routers, vehicular flows, power grids How can we analyze this networks? Introduction to NetworkX - Python awesomeness Introduction to NetworkX “Python package for the creation, manipulation and study of the structure, dynamics and functions of complex networks.” • Data structures for representing many types of networks, or graphs • Nodes can be any (hashable) Python object, edges can contain arbitrary data • Flexibility ideal for representing networks found in many different fields • Easy to install on multiple platforms • Online up-to-date documentation • First public release in April 2005 Introduction to NetworkX - design requirements • Tool to study the structure and dynamics of social, biological, and infrastructure networks • Ease-of-use and rapid development in a collaborative, multidisciplinary environment • Easy to learn, easy to teach • Open-source tool base that can easily grow in a multidisciplinary environment with non-expert users -
1 Hamiltonian Path
6.S078 Fine-Grained Algorithms and Complexity MIT Lecture 17: Algorithms for Finding Long Paths (Part 1) November 2, 2020 In this lecture and the next, we will introduce a number of algorithmic techniques used in exponential-time and FPT algorithms, through the lens of one parametric problem: Definition 0.1 (k-Path) Given a directed graph G = (V; E) and parameter k, is there a simple path1 in G of length ≥ k? Already for this simple-to-state problem, there are quite a few radically different approaches to solving it faster; we will show you some of them. We’ll see algorithms for the case of k = n (Hamiltonian Path) and then we’ll turn to “parameterizing” these algorithms so they work for all k. A number of papers in bioinformatics have used quick algorithms for k-Path and related problems to analyze various networks that arise in biology (some references are [SIKS05, ADH+08, YLRS+09]). In the following, we always denote the number of vertices jV j in our given graph G = (V; E) by n, and the number of edges jEj by m. We often associate the set of vertices V with the set [n] := f1; : : : ; ng. 1 Hamiltonian Path Before discussing k-Path, it will be useful to first discuss algorithms for the famous NP-complete Hamiltonian path problem, which is the special case where k = n. Essentially all algorithms we discuss here can be adapted to obtain algorithms for k-Path! The naive algorithm for Hamiltonian Path takes time about n! = 2Θ(n log n) to try all possible permutations of the nodes (which can also be adapted to get an O?(k!)-time algorithm for k-Path, as we’ll see). -
Matroid Theory
MATROID THEORY HAYLEY HILLMAN 1 2 HAYLEY HILLMAN Contents 1. Introduction to Matroids 3 1.1. Basic Graph Theory 3 1.2. Basic Linear Algebra 4 2. Bases 5 2.1. An Example in Linear Algebra 6 2.2. An Example in Graph Theory 6 3. Rank Function 8 3.1. The Rank Function in Graph Theory 9 3.2. The Rank Function in Linear Algebra 11 4. Independent Sets 14 4.1. Independent Sets in Graph Theory 14 4.2. Independent Sets in Linear Algebra 17 5. Cycles 21 5.1. Cycles in Graph Theory 22 5.2. Cycles in Linear Algebra 24 6. Vertex-Edge Incidence Matrix 25 References 27 MATROID THEORY 3 1. Introduction to Matroids A matroid is a structure that generalizes the properties of indepen- dence. Relevant applications are found in graph theory and linear algebra. There are several ways to define a matroid, each relate to the concept of independence. This paper will focus on the the definitions of a matroid in terms of bases, the rank function, independent sets and cycles. Throughout this paper, we observe how both graphs and matrices can be viewed as matroids. Then we translate graph theory to linear algebra, and vice versa, using the language of matroids to facilitate our discussion. Many proofs for the properties of each definition of a matroid have been omitted from this paper, but you may find complete proofs in Oxley[2], Whitney[3], and Wilson[4]. The four definitions of a matroid introduced in this paper are equiv- alent to each other. -
MTH 304: General Topology Semester 2, 2017-2018
MTH 304: General Topology Semester 2, 2017-2018 Dr. Prahlad Vaidyanathan Contents I. Continuous Functions3 1. First Definitions................................3 2. Open Sets...................................4 3. Continuity by Open Sets...........................6 II. Topological Spaces8 1. Definition and Examples...........................8 2. Metric Spaces................................. 11 3. Basis for a topology.............................. 16 4. The Product Topology on X × Y ...................... 18 Q 5. The Product Topology on Xα ....................... 20 6. Closed Sets.................................. 22 7. Continuous Functions............................. 27 8. The Quotient Topology............................ 30 III.Properties of Topological Spaces 36 1. The Hausdorff property............................ 36 2. Connectedness................................. 37 3. Path Connectedness............................. 41 4. Local Connectedness............................. 44 5. Compactness................................. 46 6. Compact Subsets of Rn ............................ 50 7. Continuous Functions on Compact Sets................... 52 8. Compactness in Metric Spaces........................ 56 9. Local Compactness.............................. 59 IV.Separation Axioms 62 1. Regular Spaces................................ 62 2. Normal Spaces................................ 64 3. Tietze's extension Theorem......................... 67 4. Urysohn Metrization Theorem........................ 71 5. Imbedding of Manifolds.......................... -
K-Path Centrality: a New Centrality Measure in Social Networks
Centrality Metrics in Social Network Analysis K-path: A New Centrality Metric Experiments Summary K-Path Centrality: A New Centrality Measure in Social Networks Adriana Iamnitchi University of South Florida joint work with Tharaka Alahakoon, Rahul Tripathi, Nicolas Kourtellis and Ramanuja Simha Adriana Iamnitchi K-Path Centrality: A New Centrality Measure in Social Networks 1 of 23 Centrality Metrics in Social Network Analysis Centrality Metrics Overview K-path: A New Centrality Metric Betweenness Centrality Experiments Applications Summary Computing Betweenness Centrality Centrality Metrics in Social Network Analysis Betweenness Centrality - how much a node controls the flow between any other two nodes Closeness Centrality - the extent a node is near all other nodes Degree Centrality - the number of ties to other nodes Eigenvector Centrality - the relative importance of a node Adriana Iamnitchi K-Path Centrality: A New Centrality Measure in Social Networks 2 of 23 Centrality Metrics in Social Network Analysis Centrality Metrics Overview K-path: A New Centrality Metric Betweenness Centrality Experiments Applications Summary Computing Betweenness Centrality Betweenness Centrality measures the extent to which a node lies on the shortest path between two other nodes betweennes CB (v) of a vertex v is the summation over all pairs of nodes of the fractional shortest paths going through v. Definition (Betweenness Centrality) For every vertex v 2 V of a weighted graph G(V ; E), the betweenness centrality CB (v) of v is defined by X X σst (v) CB -
Matroids You Have Known
26 MATHEMATICS MAGAZINE Matroids You Have Known DAVID L. NEEL Seattle University Seattle, Washington 98122 [email protected] NANCY ANN NEUDAUER Pacific University Forest Grove, Oregon 97116 nancy@pacificu.edu Anyone who has worked with matroids has come away with the conviction that matroids are one of the richest and most useful ideas of our day. —Gian Carlo Rota [10] Why matroids? Have you noticed hidden connections between seemingly unrelated mathematical ideas? Strange that finding roots of polynomials can tell us important things about how to solve certain ordinary differential equations, or that computing a determinant would have anything to do with finding solutions to a linear system of equations. But this is one of the charming features of mathematics—that disparate objects share similar traits. Properties like independence appear in many contexts. Do you find independence everywhere you look? In 1933, three Harvard Junior Fellows unified this recurring theme in mathematics by defining a new mathematical object that they dubbed matroid [4]. Matroids are everywhere, if only we knew how to look. What led those junior-fellows to matroids? The same thing that will lead us: Ma- troids arise from shared behaviors of vector spaces and graphs. We explore this natural motivation for the matroid through two examples and consider how properties of in- dependence surface. We first consider the two matroids arising from these examples, and later introduce three more that are probably less familiar. Delving deeper, we can find matroids in arrangements of hyperplanes, configurations of points, and geometric lattices, if your tastes run in that direction. -
Incremental Dynamic Construction of Layered Polytree Networks )
440 Incremental Dynamic Construction of Layered Polytree Networks Keung-Chi N g Tod S. Levitt lET Inc., lET Inc., 14 Research Way, Suite 3 14 Research Way, Suite 3 E. Setauket, NY 11733 E. Setauket , NY 11733 [email protected] [email protected] Abstract Many exact probabilistic inference algorithms1 have been developed and refined. Among the earlier meth ods, the polytree algorithm (Kim and Pearl 1983, Certain classes of problems, including per Pearl 1986) can efficiently update singly connected ceptual data understanding, robotics, discov belief networks (or polytrees) , however, it does not ery, and learning, can be represented as incre work ( without modification) on multiply connected mental, dynamically constructed belief net networks. In a singly connected belief network, there is works. These automatically constructed net at most one path (in the undirected sense) between any works can be dynamically extended and mod pair of nodes; in a multiply connected belief network, ified as evidence of new individuals becomes on the other hand, there is at least one pair of nodes available. The main result of this paper is the that has more than one path between them. Despite incremental extension of the singly connect the fact that the general updating problem for mul ed polytree network in such a way that the tiply connected networks is NP-hard (Cooper 1990), network retains its singly connected polytree many propagation algorithms have been applied suc structure after the changes. The algorithm cessfully to multiply connected networks, especially on is deterministic and is guaranteed to have networks that are sparsely connected. These methods a complexity of single node addition that is include clustering (also known as node aggregation) at most of order proportional to the number (Chang and Fung 1989, Pearl 1988), node elimination of nodes (or size) of the network. -
A Framework for the Evaluation and Management of Network Centrality ∗
A Framework for the Evaluation and Management of Network Centrality ∗ Vatche Ishakiany D´oraErd}osz Evimaria Terzix Azer Bestavros{ Abstract total number of shortest paths that go through it. Ever Network-analysis literature is rich in node-centrality mea- since, researchers have proposed different measures of sures that quantify the centrality of a node as a function centrality, as well as algorithms for computing them [1, of the (shortest) paths of the network that go through it. 2, 4, 10, 11]. The common characteristic of these Existing work focuses on defining instances of such mea- measures is that they quantify a node's centrality by sures and designing algorithms for the specific combinato- computing the number (or the fraction) of (shortest) rial problems that arise for each instance. In this work, we paths that go through that node. For example, in a propose a unifying definition of centrality that subsumes all network where packets propagate through nodes, a node path-counting based centrality definitions: e.g., stress, be- with high centrality is one that \sees" (and potentially tweenness or paths centrality. We also define a generic algo- controls) most of the traffic. rithm for computing this generalized centrality measure for In many applications, the centrality of a single node every node and every group of nodes in the network. Next, is not as important as the centrality of a group of we define two optimization problems: k-Group Central- nodes. For example, in a network of lobbyists, one ity Maximization and k-Edge Centrality Boosting. might want to measure the combined centrality of a In the former, the task is to identify the subset of k nodes particular group of lobbyists. -
Discrete Mathematics Panconnected Index of Graphs
Discrete Mathematics 340 (2017) 1092–1097 Contents lists available at ScienceDirect Discrete Mathematics journal homepage: www.elsevier.com/locate/disc Panconnected index of graphs Hao Li a,*, Hong-Jian Lai b, Yang Wu b, Shuzhen Zhuc a Department of Mathematics, Renmin University, Beijing, PR China b Department of Mathematics, West Virginia University, Morgantown, WV 26506, USA c Department of Mathematics, Taiyuan University of Technology, Taiyuan, 030024, PR China article info a b s t r a c t Article history: For a connected graph G not isomorphic to a path, a cycle or a K1;3, let pc(G) denote the Received 22 January 2016 smallest integer n such that the nth iterated line graph Ln(G) is panconnected. A path P is Received in revised form 25 October 2016 a divalent path of G if the internal vertices of P are of degree 2 in G. If every edge of P is a Accepted 25 October 2016 cut edge of G, then P is a bridge divalent path of G; if the two ends of P are of degree s and Available online 30 November 2016 t, respectively, then P is called a divalent (s; t)-path. Let `(G) D maxfm V G has a divalent g Keywords: path of length m that is not both of length 2 and in a K3 . We prove the following. Iterated line graphs (i) If G is a connected triangular graph, then L(G) is panconnected if and only if G is Panconnectedness essentially 3-edge-connected. Panconnected index of graphs (ii) pc(G) ≤ `(G) C 2. -
On the Simple Connectedness of Hyperplane Complements in Dual Polar Spaces
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Ghent University Academic Bibliography On the simple connectedness of hyperplane complements in dual polar spaces I. Cardinali, B. De Bruyn∗ and A. Pasini Abstract Let ∆ be a dual polar space of rank n ≥ 4, H be a hyperplane of ∆ and Γ := ∆\H be the complement of H in ∆. We shall prove that, if all lines of ∆ have more than 3 points, then Γ is simply connected. Then we show how this theorem can be exploited to prove that certain families of hyperplanes of dual polar spaces, or all hyperplanes of certain dual polar spaces, arise from embeddings. Keywords: diagram geometry, dual polar spaces, hyperplanes, simple connected- ness, universal embedding MSC: 51E24, 51A50 1 Introduction We presume the reader is familiar with notions as simple connectedness, hy- perplanes, hyperplane complements, full projective embeddings, hyperplanes arising from an embedding, and other concepts involved in the theorems to be stated in this introduction. If not, the reader may see Section 2 of this paper, where those concepts are recalled. The following is the main theorem of this paper. We shall prove it in Section 3. Theorem 1.1 Let ∆ be a dual polar space of rank ≥ 4 with at least 4 points on each line. If H is a hyperplane of ∆ then the complement ∆ \ H of H in ∆ is simply connected. ∗Postdoctoral Fellow on the Research Foundation - Flanders 1 Not so much is known on ∆ \ H when rank(∆) = 3. The next theorem is one of the few results obtained so far for that case. -
1 Plane and Planar Graphs Definition 1 a Graph G(V,E) Is Called Plane If
1 Plane and Planar Graphs Definition 1 A graph G(V,E) is called plane if • V is a set of points in the plane; • E is a set of curves in the plane such that 1. every curve contains at most two vertices and these vertices are the ends of the curve; 2. the intersection of every two curves is either empty, or one, or two vertices of the graph. Definition 2 A graph is called planar, if it is isomorphic to a plane graph. The plane graph which is isomorphic to a given planar graph G is said to be embedded in the plane. A plane graph isomorphic to G is called its drawing. 1 9 2 4 2 1 9 8 3 3 6 8 7 4 5 6 5 7 G is a planar graph H is a plane graph isomorphic to G 1 The adjacency list of graph F . Is it planar? 1 4 56 8 911 2 9 7 6 103 3 7 11 8 2 4 1 5 9 12 5 1 12 4 6 1 2 8 10 12 7 2 3 9 11 8 1 11 36 10 9 7 4 12 12 10 2 6 8 11 1387 12 9546 What happens if we add edge (1,12)? Or edge (7,4)? 2 Definition 3 A set U in a plane is called open, if for every x ∈ U, all points within some distance r from x belong to U. A region is an open set U which contains polygonal u,v-curve for every two points u,v ∈ U. -
On Hamiltonian Line-Graphsq
ON HAMILTONIANLINE-GRAPHSQ BY GARY CHARTRAND Introduction. The line-graph L(G) of a nonempty graph G is the graph whose point set can be put in one-to-one correspondence with the line set of G in such a way that two points of L(G) are adjacent if and only if the corresponding lines of G are adjacent. In this paper graphs whose line-graphs are eulerian or hamiltonian are investigated and characterizations of these graphs are given. Furthermore, neces- sary and sufficient conditions are presented for iterated line-graphs to be eulerian or hamiltonian. It is shown that for any connected graph G which is not a path, there exists an iterated line-graph of G which is hamiltonian. Some elementary results on line-graphs. In the course of the article, it will be necessary to refer to several basic facts concerning line-graphs. In this section these results are presented. All the proofs are straightforward and are therefore omitted. In addition a few definitions are given. If x is a Une of a graph G joining the points u and v, written x=uv, then we define the degree of x by deg zz+deg v—2. We note that if w ' the point of L(G) which corresponds to the line x, then the degree of w in L(G) equals the degree of x in G. A point or line is called odd or even depending on whether it has odd or even degree. If G is a connected graph having at least one line, then L(G) is also a connected graph.