RETRACTIONS to PSEUDOFORESTS 1. Introduction
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Forbidden Subgraph Characterization of Quasi-Line Graphs Medha Dhurandhar [email protected]
Forbidden Subgraph Characterization of Quasi-line Graphs Medha Dhurandhar [email protected] Abstract: Here in particular, we give a characterization of Quasi-line Graphs in terms of forbidden induced subgraphs. In general, we prove a necessary and sufficient condition for a graph to be a union of two cliques. 1. Introduction: A graph is a quasi-line graph if for every vertex v, the set of neighbours of v is expressible as the union of two cliques. Such graphs are more general than line graphs, but less general than claw-free graphs. In [2] Chudnovsky and Seymour gave a constructive characterization of quasi-line graphs. An alternative characterization of quasi-line graphs is given in [3] stating that a graph has a fuzzy reconstruction iff it is a quasi-line graph and also in [4] using the concept of sums of Hoffman graphs. Here we characterize quasi-line graphs in terms of the forbidden induced subgraphs like line graphs. We consider in this paper only finite, simple, connected, undirected graphs. The vertex set of G is denoted by V(G), the edge set by E(G), the maximum degree of vertices in G by Δ(G), the maximum clique size by (G) and the chromatic number by G). N(u) denotes the neighbourhood of u and N(u) = N(u) + u. For further notation please refer to Harary [3]. 2. Main Result: Before proving the main result we prove some lemmas, which will be used later. Lemma 1: If G is {3K1, C5}-free, then either 1) G ~ K|V(G)| or 2) If v, w V(G) are s.t. -
Infinitely Many Minimal Classes of Graphs of Unbounded Clique-Width∗
Infinitely many minimal classes of graphs of unbounded clique-width∗ A. Collins, J. Foniok†, N. Korpelainen, V. Lozin, V. Zamaraev Abstract The celebrated theorem of Robertson and Seymour states that in the family of minor-closed graph classes, there is a unique minimal class of graphs of unbounded tree-width, namely, the class of planar graphs. In the case of tree-width, the restriction to minor-closed classes is justified by the fact that the tree-width of a graph is never smaller than the tree-width of any of its minors. This, however, is not the case with respect to clique-width, as the clique-width of a graph can be (much) smaller than the clique-width of its minor. On the other hand, the clique-width of a graph is never smaller than the clique-width of any of its induced subgraphs, which allows us to be restricted to hereditary classes (that is, classes closed under taking induced subgraphs), when we study clique-width. Up to date, only finitely many minimal hereditary classes of graphs of unbounded clique-width have been discovered in the literature. In the present paper, we prove that the family of such classes is infinite. Moreover, we show that the same is true with respect to linear clique-width. Keywords: clique-width, linear clique-width, hereditary class 1 Introduction Clique-width is a graph parameter which is important in theoretical computer science, because many algorithmic problems that are generally NP-hard become polynomial-time solvable when restricted to graphs of bounded clique-width [4]. -
Graph Varieties Axiomatized by Semimedial, Medial, and Some Other Groupoid Identities
Discussiones Mathematicae General Algebra and Applications 40 (2020) 143–157 doi:10.7151/dmgaa.1344 GRAPH VARIETIES AXIOMATIZED BY SEMIMEDIAL, MEDIAL, AND SOME OTHER GROUPOID IDENTITIES Erkko Lehtonen Technische Universit¨at Dresden Institut f¨ur Algebra 01062 Dresden, Germany e-mail: [email protected] and Chaowat Manyuen Department of Mathematics, Faculty of Science Khon Kaen University Khon Kaen 40002, Thailand e-mail: [email protected] Abstract Directed graphs without multiple edges can be represented as algebras of type (2, 0), so-called graph algebras. A graph is said to satisfy an identity if the corresponding graph algebra does, and the set of all graphs satisfying a set of identities is called a graph variety. We describe the graph varieties axiomatized by certain groupoid identities (medial, semimedial, autodis- tributive, commutative, idempotent, unipotent, zeropotent, alternative). Keywords: graph algebra, groupoid, identities, semimediality, mediality. 2010 Mathematics Subject Classification: 05C25, 03C05. 1. Introduction Graph algebras were introduced by Shallon [10] in 1979 with the purpose of providing examples of nonfinitely based finite algebras. Let us briefly recall this concept. Given a directed graph G = (V, E) without multiple edges, the graph algebra associated with G is the algebra A(G) = (V ∪ {∞}, ◦, ∞) of type (2, 0), 144 E. Lehtonen and C. Manyuen where ∞ is an element not belonging to V and the binary operation ◦ is defined by the rule u, if (u, v) ∈ E, u ◦ v := (∞, otherwise, for all u, v ∈ V ∪ {∞}. We will denote the product u ◦ v simply by juxtaposition uv. Using this representation, we may view any algebraic property of a graph algebra as a property of the graph with which it is associated. -
Networkx: Network Analysis with Python
NetworkX: Network Analysis with Python Salvatore Scellato Full tutorial presented at the XXX SunBelt Conference “NetworkX introduction: Hacking social networks using the Python programming language” by Aric Hagberg & Drew Conway Outline 1. Introduction to NetworkX 2. Getting started with Python and NetworkX 3. Basic network analysis 4. Writing your own code 5. You are ready for your project! 1. Introduction to NetworkX. Introduction to NetworkX - network analysis Vast amounts of network data are being generated and collected • Sociology: web pages, mobile phones, social networks • Technology: Internet routers, vehicular flows, power grids How can we analyze this networks? Introduction to NetworkX - Python awesomeness Introduction to NetworkX “Python package for the creation, manipulation and study of the structure, dynamics and functions of complex networks.” • Data structures for representing many types of networks, or graphs • Nodes can be any (hashable) Python object, edges can contain arbitrary data • Flexibility ideal for representing networks found in many different fields • Easy to install on multiple platforms • Online up-to-date documentation • First public release in April 2005 Introduction to NetworkX - design requirements • Tool to study the structure and dynamics of social, biological, and infrastructure networks • Ease-of-use and rapid development in a collaborative, multidisciplinary environment • Easy to learn, easy to teach • Open-source tool base that can easily grow in a multidisciplinary environment with non-expert users -
Counting Independent Sets in Graphs with Bounded Bipartite Pathwidth∗
Counting independent sets in graphs with bounded bipartite pathwidth∗ Martin Dyery Catherine Greenhillz School of Computing School of Mathematics and Statistics University of Leeds UNSW Sydney, NSW 2052 Leeds LS2 9JT, UK Australia [email protected] [email protected] Haiko M¨uller∗ School of Computing University of Leeds Leeds LS2 9JT, UK [email protected] 7 August 2019 Abstract We show that a simple Markov chain, the Glauber dynamics, can efficiently sample independent sets almost uniformly at random in polynomial time for graphs in a certain class. The class is determined by boundedness of a new graph parameter called bipartite pathwidth. This result, which we prove for the more general hardcore distribution with fugacity λ, can be viewed as a strong generalisation of Jerrum and Sinclair's work on approximately counting matchings, that is, independent sets in line graphs. The class of graphs with bounded bipartite pathwidth includes claw-free graphs, which generalise line graphs. We consider two further generalisations of claw-free graphs and prove that these classes have bounded bipartite pathwidth. We also show how to extend all our results to polynomially-bounded vertex weights. 1 Introduction There is a well-known bijection between matchings of a graph G and independent sets in the line graph of G. We will show that we can approximate the number of independent sets ∗A preliminary version of this paper appeared as [19]. yResearch supported by EPSRC grant EP/S016562/1 \Sampling in hereditary classes". zResearch supported by Australian Research Council grant DP190100977. 1 in graphs for which all bipartite induced subgraphs are well structured, in a sense that we will define precisely. -
1 Hamiltonian Path
6.S078 Fine-Grained Algorithms and Complexity MIT Lecture 17: Algorithms for Finding Long Paths (Part 1) November 2, 2020 In this lecture and the next, we will introduce a number of algorithmic techniques used in exponential-time and FPT algorithms, through the lens of one parametric problem: Definition 0.1 (k-Path) Given a directed graph G = (V; E) and parameter k, is there a simple path1 in G of length ≥ k? Already for this simple-to-state problem, there are quite a few radically different approaches to solving it faster; we will show you some of them. We’ll see algorithms for the case of k = n (Hamiltonian Path) and then we’ll turn to “parameterizing” these algorithms so they work for all k. A number of papers in bioinformatics have used quick algorithms for k-Path and related problems to analyze various networks that arise in biology (some references are [SIKS05, ADH+08, YLRS+09]). In the following, we always denote the number of vertices jV j in our given graph G = (V; E) by n, and the number of edges jEj by m. We often associate the set of vertices V with the set [n] := f1; : : : ; ng. 1 Hamiltonian Path Before discussing k-Path, it will be useful to first discuss algorithms for the famous NP-complete Hamiltonian path problem, which is the special case where k = n. Essentially all algorithms we discuss here can be adapted to obtain algorithms for k-Path! The naive algorithm for Hamiltonian Path takes time about n! = 2Θ(n log n) to try all possible permutations of the nodes (which can also be adapted to get an O?(k!)-time algorithm for k-Path, as we’ll see). -
General Approach to Line Graphs of Graphs 1
DEMONSTRATIO MATHEMATICA Vol. XVII! No 2 1985 Antoni Marczyk, Zdzislaw Skupien GENERAL APPROACH TO LINE GRAPHS OF GRAPHS 1. Introduction A unified approach to the notion of a line graph of general graphs is adopted and proofs of theorems announced in [6] are presented. Those theorems characterize five different types of line graphs. Both Krausz-type and forbidden induced sub- graph characterizations are provided. So far other authors introduced and dealt with single spe- cial notions of a line graph of graphs possibly belonging to a special subclass of graphs. In particular, the notion of a simple line graph of a simple graph is implied by a paper of Whitney (1932). Since then it has been repeatedly introduc- ed, rediscovered and generalized by many authors, among them are Krausz (1943), Izbicki (1960$ a special line graph of a general graph), Sabidussi (1961) a simple line graph of a loop-free graph), Menon (1967} adjoint graph of a general graph) and Schwartz (1969; interchange graph which coincides with our line graph defined below). In this paper we follow another way, originated in our previous work [6]. Namely, we distinguish special subclasses of general graphs and consider five different types of line graphs each of which is defined in a natural way. Note that a similar approach to the notion of a line graph of hypergraphs can be adopted. We consider here the following line graphsi line graphs, loop-free line graphs, simple line graphs, as well as augmented line graphs and augmented loop-free line graphs. - 447 - 2 A. Marczyk, Z. -
Matroid Theory
MATROID THEORY HAYLEY HILLMAN 1 2 HAYLEY HILLMAN Contents 1. Introduction to Matroids 3 1.1. Basic Graph Theory 3 1.2. Basic Linear Algebra 4 2. Bases 5 2.1. An Example in Linear Algebra 6 2.2. An Example in Graph Theory 6 3. Rank Function 8 3.1. The Rank Function in Graph Theory 9 3.2. The Rank Function in Linear Algebra 11 4. Independent Sets 14 4.1. Independent Sets in Graph Theory 14 4.2. Independent Sets in Linear Algebra 17 5. Cycles 21 5.1. Cycles in Graph Theory 22 5.2. Cycles in Linear Algebra 24 6. Vertex-Edge Incidence Matrix 25 References 27 MATROID THEORY 3 1. Introduction to Matroids A matroid is a structure that generalizes the properties of indepen- dence. Relevant applications are found in graph theory and linear algebra. There are several ways to define a matroid, each relate to the concept of independence. This paper will focus on the the definitions of a matroid in terms of bases, the rank function, independent sets and cycles. Throughout this paper, we observe how both graphs and matrices can be viewed as matroids. Then we translate graph theory to linear algebra, and vice versa, using the language of matroids to facilitate our discussion. Many proofs for the properties of each definition of a matroid have been omitted from this paper, but you may find complete proofs in Oxley[2], Whitney[3], and Wilson[4]. The four definitions of a matroid introduced in this paper are equiv- alent to each other. -
Networkx Reference Release 1.9.1
NetworkX Reference Release 1.9.1 Aric Hagberg, Dan Schult, Pieter Swart September 20, 2014 CONTENTS 1 Overview 1 1.1 Who uses NetworkX?..........................................1 1.2 Goals...................................................1 1.3 The Python programming language...................................1 1.4 Free software...............................................2 1.5 History..................................................2 2 Introduction 3 2.1 NetworkX Basics.............................................3 2.2 Nodes and Edges.............................................4 3 Graph types 9 3.1 Which graph class should I use?.....................................9 3.2 Basic graph types.............................................9 4 Algorithms 127 4.1 Approximation.............................................. 127 4.2 Assortativity............................................... 132 4.3 Bipartite................................................. 141 4.4 Blockmodeling.............................................. 161 4.5 Boundary................................................. 162 4.6 Centrality................................................. 163 4.7 Chordal.................................................. 184 4.8 Clique.................................................. 187 4.9 Clustering................................................ 190 4.10 Communities............................................... 193 4.11 Components............................................... 194 4.12 Connectivity.............................................. -
K-Path Centrality: a New Centrality Measure in Social Networks
Centrality Metrics in Social Network Analysis K-path: A New Centrality Metric Experiments Summary K-Path Centrality: A New Centrality Measure in Social Networks Adriana Iamnitchi University of South Florida joint work with Tharaka Alahakoon, Rahul Tripathi, Nicolas Kourtellis and Ramanuja Simha Adriana Iamnitchi K-Path Centrality: A New Centrality Measure in Social Networks 1 of 23 Centrality Metrics in Social Network Analysis Centrality Metrics Overview K-path: A New Centrality Metric Betweenness Centrality Experiments Applications Summary Computing Betweenness Centrality Centrality Metrics in Social Network Analysis Betweenness Centrality - how much a node controls the flow between any other two nodes Closeness Centrality - the extent a node is near all other nodes Degree Centrality - the number of ties to other nodes Eigenvector Centrality - the relative importance of a node Adriana Iamnitchi K-Path Centrality: A New Centrality Measure in Social Networks 2 of 23 Centrality Metrics in Social Network Analysis Centrality Metrics Overview K-path: A New Centrality Metric Betweenness Centrality Experiments Applications Summary Computing Betweenness Centrality Betweenness Centrality measures the extent to which a node lies on the shortest path between two other nodes betweennes CB (v) of a vertex v is the summation over all pairs of nodes of the fractional shortest paths going through v. Definition (Betweenness Centrality) For every vertex v 2 V of a weighted graph G(V ; E), the betweenness centrality CB (v) of v is defined by X X σst (v) CB -
Matroids You Have Known
26 MATHEMATICS MAGAZINE Matroids You Have Known DAVID L. NEEL Seattle University Seattle, Washington 98122 [email protected] NANCY ANN NEUDAUER Pacific University Forest Grove, Oregon 97116 nancy@pacificu.edu Anyone who has worked with matroids has come away with the conviction that matroids are one of the richest and most useful ideas of our day. —Gian Carlo Rota [10] Why matroids? Have you noticed hidden connections between seemingly unrelated mathematical ideas? Strange that finding roots of polynomials can tell us important things about how to solve certain ordinary differential equations, or that computing a determinant would have anything to do with finding solutions to a linear system of equations. But this is one of the charming features of mathematics—that disparate objects share similar traits. Properties like independence appear in many contexts. Do you find independence everywhere you look? In 1933, three Harvard Junior Fellows unified this recurring theme in mathematics by defining a new mathematical object that they dubbed matroid [4]. Matroids are everywhere, if only we knew how to look. What led those junior-fellows to matroids? The same thing that will lead us: Ma- troids arise from shared behaviors of vector spaces and graphs. We explore this natural motivation for the matroid through two examples and consider how properties of in- dependence surface. We first consider the two matroids arising from these examples, and later introduce three more that are probably less familiar. Delving deeper, we can find matroids in arrangements of hyperplanes, configurations of points, and geometric lattices, if your tastes run in that direction. -
Strongly Connected Components and Biconnected Components
Strongly Connected Components and Biconnected Components Daniel Wisdom 27 January 2017 1 2 3 4 5 6 7 8 Figure 1: A directed graph. Credit: Crash Course Coding Companion. 1 Strongly Connected Components A strongly connected component (SCC) is a set of vertices where every vertex can reach every other vertex. In an undirected graph the SCCs are just the groups of connected vertices. We can find them using a simple DFS. This works because, in an undirected graph, u can reach v if and only if v can reach u. This is not true in a directed graph, which makes finding the SCCs harder. More on that later. 2 Kernel graph We can travel between any two nodes in the same strongly connected component. So what if we replaced each strongly connected component with a single node? This would give us what we call the kernel graph, which describes the edges between strongly connected components. Note that the kernel graph is a directed acyclic graph because any cycles would constitute an SCC, so the cycle would be compressed into a kernel. 3 1,2,5,6 4,7 8 Figure 2: Kernel graph of the above directed graph. 3 Tarjan's SCC Algorithm In a DFS traversal of the graph every SCC will be a subtree of the DFS tree. This subtree is not necessarily proper, meaning that it may be missing some branches which are their own SCCs. This means that if we can identify every node that is the root of its SCC in the DFS, we can enumerate all the SCCs.